##gff-version 3
NA12877_chrY	CAT	gene	46475	47823	.	+	.	source_gene_common_name=ENSG00000292329;source_gene=ENSG00000292329.1;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;gene_id=NA12877_ch_G0000001;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000292329;gene_sources=liftoff;ID=NA12877_ch_G0000001;Name=ENSG00000292329
NA12877_chrY	CAT	transcript	46475	47823	1000	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=NA12877_ch_T0000001;gene_id=NA12877_ch_G0000001;Parent=NA12877_ch_G0000001;transcript_name=NA12877_ch_T0000001;gene_name=ENSG00000292329;ID=NA12877_ch_T0000001;Name=ENSG00000292329
NA12877_chrY	CAT	exon	46475	46578	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=NA12877_ch_T0000001;gene_id=NA12877_ch_G0000001;Parent=NA12877_ch_T0000001;transcript_name=NA12877_ch_T0000001;gene_name=ENSG00000292329;ID=exon:NA12877_ch_T0000001:0;Name=ENSG00000292329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	46579	47668	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=NA12877_ch_T0000001;gene_id=NA12877_ch_G0000001;Parent=NA12877_ch_T0000001;transcript_name=NA12877_ch_T0000001;gene_name=ENSG00000292329;ID=intron:NA12877_ch_T0000001:0;Name=ENSG00000292329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	47669	47823	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=NA12877_ch_T0000001;gene_id=NA12877_ch_G0000001;Parent=NA12877_ch_T0000001;transcript_name=NA12877_ch_T0000001;gene_name=ENSG00000292329;ID=exon:NA12877_ch_T0000001:1;Name=ENSG00000292329;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	60410	79163	.	-	.	source_gene_common_name=ENSG00000310553;source_gene=ENSG00000310553.1;alternative_source_transcripts=ENST00000850732.1;gene_id=NA12877_ch_G0000002;gene_biotype=lncRNA;gene_name=ENSG00000310553;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000002;Name=ENSG00000310553
NA12877_chrY	CAT	transcript	60410	79163	1000	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850732.1;transcript_score=299.79200000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1;transcript_id=NA12877_ch_T0000002;gene_id=NA12877_ch_G0000002;Parent=NA12877_ch_G0000002;transcript_name=NA12877_ch_T0000002;gene_name=ENSG00000310553;ID=NA12877_ch_T0000002;Name=ENSG00000310553
NA12877_chrY	CAT	exon	60410	60601	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850732.1;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1;transcript_id=NA12877_ch_T0000002;gene_id=NA12877_ch_G0000002;Parent=NA12877_ch_T0000002;transcript_name=NA12877_ch_T0000002;gene_name=ENSG00000310553;ID=exon:NA12877_ch_T0000002:0;Name=ENSG00000310553;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	60602	78635	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850732.1;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1;transcript_id=NA12877_ch_T0000002;gene_id=NA12877_ch_G0000002;Parent=NA12877_ch_T0000002;transcript_name=NA12877_ch_T0000002;gene_name=ENSG00000310553;ID=intron:NA12877_ch_T0000002:0;Name=ENSG00000310553;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	78636	78774	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850732.1;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1;transcript_id=NA12877_ch_T0000002;gene_id=NA12877_ch_G0000002;Parent=NA12877_ch_T0000002;transcript_name=NA12877_ch_T0000002;gene_name=ENSG00000310553;ID=exon:NA12877_ch_T0000002:1;Name=ENSG00000310553;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	78775	79014	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850732.1;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1;transcript_id=NA12877_ch_T0000002;gene_id=NA12877_ch_G0000002;Parent=NA12877_ch_T0000002;transcript_name=NA12877_ch_T0000002;gene_name=ENSG00000310553;ID=intron:NA12877_ch_T0000002:1;Name=ENSG00000310553;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	79015	79163	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850732.1;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1;transcript_id=NA12877_ch_T0000002;gene_id=NA12877_ch_G0000002;Parent=NA12877_ch_T0000002;transcript_name=NA12877_ch_T0000002;gene_name=ENSG00000310553;ID=exon:NA12877_ch_T0000002:2;Name=ENSG00000310553;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	78636	79163	1000	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=299.79200000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;transcript_id=NA12877_ch_T0000003;gene_id=NA12877_ch_G0000002;Parent=NA12877_ch_G0000002;transcript_name=NA12877_ch_T0000003;gene_name=ENSG00000310553;ID=NA12877_ch_T0000003;Name=ENSG00000310553
NA12877_chrY	CAT	exon	78636	78774	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;transcript_id=NA12877_ch_T0000003;gene_id=NA12877_ch_G0000002;Parent=NA12877_ch_T0000003;transcript_name=NA12877_ch_T0000003;gene_name=ENSG00000310553;ID=exon:NA12877_ch_T0000003:0;Name=ENSG00000310553;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	78775	79014	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;transcript_id=NA12877_ch_T0000003;gene_id=NA12877_ch_G0000002;Parent=NA12877_ch_T0000003;transcript_name=NA12877_ch_T0000003;gene_name=ENSG00000310553;ID=intron:NA12877_ch_T0000003:0;Name=ENSG00000310553;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	79015	79163	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=299.79200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;transcript_id=NA12877_ch_T0000003;gene_id=NA12877_ch_G0000002;Parent=NA12877_ch_T0000003;transcript_name=NA12877_ch_T0000003;gene_name=ENSG00000310553;ID=exon:NA12877_ch_T0000003:1;Name=ENSG00000310553;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	79275	105528	.	+	.	source_gene_common_name=PLCXD1;source_gene=ENSG00000292344.1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;gene_id=NA12877_ch_G0000003;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff;ID=NA12877_ch_G0000003;Name=PLCXD1
NA12877_chrY	CAT	transcript	79275	105525	100	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_G0000003;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=NA12877_ch_T0000004;Name=PLCXD1
NA12877_chrY	CAT	exon	79275	79347	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	79348	84338	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	84339	84541	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	84542	87014	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	87015	87162	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	87036	87162	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	87036	87038	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=start_codon:NA12877_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	87163	91522	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	91523	91659	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	91523	91659	.	+	2	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	91660	93439	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	93440	93568	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	93440	93568	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	93569	94166	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	94167	94322	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	94167	94322	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	94323	95702	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	95703	95886	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000004:6;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	95703	95886	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	95887	101266	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000004:6;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	101267	105525	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000004:7;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	101267	101505	.	+	2	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	101503	101505	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=NA12877_ch_T0000004;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000004;transcript_name=NA12877_ch_T0000004;gene_name=PLCXD1;ID=stop_codon:NA12877_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	79277	94205	1000	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=NA12877_ch_T0000005;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_G0000003;transcript_name=NA12877_ch_T0000005;gene_name=PLCXD1;ID=NA12877_ch_T0000005;Name=PLCXD1
NA12877_chrY	CAT	exon	79277	79347	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=NA12877_ch_T0000005;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000005;transcript_name=NA12877_ch_T0000005;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	79348	87014	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=NA12877_ch_T0000005;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000005;transcript_name=NA12877_ch_T0000005;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	87015	87162	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=NA12877_ch_T0000005;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000005;transcript_name=NA12877_ch_T0000005;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	87163	91522	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=NA12877_ch_T0000005;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000005;transcript_name=NA12877_ch_T0000005;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	91523	91659	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=NA12877_ch_T0000005;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000005;transcript_name=NA12877_ch_T0000005;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	91660	93439	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=NA12877_ch_T0000005;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000005;transcript_name=NA12877_ch_T0000005;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	93440	93584	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=NA12877_ch_T0000005;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000005;transcript_name=NA12877_ch_T0000005;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	93585	94166	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=NA12877_ch_T0000005;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000005;transcript_name=NA12877_ch_T0000005;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	94167	94205	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=NA12877_ch_T0000005;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000005;transcript_name=NA12877_ch_T0000005;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	79306	94297	100	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_G0000003;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=NA12877_ch_T0000006;Name=PLCXD1
NA12877_chrY	CAT	exon	79306	79347	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	79348	87014	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	87015	87162	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	87036	87162	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	87036	87038	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=start_codon:NA12877_ch_T0000006;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	87163	91522	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	91523	91659	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	91523	91659	.	+	2	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	91660	93439	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	93440	93568	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	93440	93568	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	93569	94166	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	94167	94297	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000006:4;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	94167	94297	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=NA12877_ch_T0000006;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000006;transcript_name=NA12877_ch_T0000006;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	83886	91659	100	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=NA12877_ch_T0000008;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_G0000003;transcript_name=NA12877_ch_T0000008;gene_name=PLCXD1;ID=NA12877_ch_T0000008;Name=PLCXD1
NA12877_chrY	CAT	exon	83886	83994	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=NA12877_ch_T0000008;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000008;transcript_name=NA12877_ch_T0000008;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	83995	84338	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=NA12877_ch_T0000008;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000008;transcript_name=NA12877_ch_T0000008;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	84339	84541	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=NA12877_ch_T0000008;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000008;transcript_name=NA12877_ch_T0000008;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	84542	87014	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=NA12877_ch_T0000008;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000008;transcript_name=NA12877_ch_T0000008;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	87015	87162	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=NA12877_ch_T0000008;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000008;transcript_name=NA12877_ch_T0000008;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	87036	87162	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=NA12877_ch_T0000008;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000008;transcript_name=NA12877_ch_T0000008;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	87036	87038	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=NA12877_ch_T0000008;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000008;transcript_name=NA12877_ch_T0000008;gene_name=PLCXD1;ID=start_codon:NA12877_ch_T0000008;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	87163	91522	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=NA12877_ch_T0000008;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000008;transcript_name=NA12877_ch_T0000008;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	91523	91659	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=NA12877_ch_T0000008;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000008;transcript_name=NA12877_ch_T0000008;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	91523	91659	.	+	2	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=NA12877_ch_T0000008;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000008;transcript_name=NA12877_ch_T0000008;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	84067	91577	100	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=NA12877_ch_T0000009;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_G0000003;transcript_name=NA12877_ch_T0000009;gene_name=PLCXD1;ID=NA12877_ch_T0000009;Name=PLCXD1
NA12877_chrY	CAT	exon	84067	84129	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=NA12877_ch_T0000009;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000009;transcript_name=NA12877_ch_T0000009;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	84130	84338	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=NA12877_ch_T0000009;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000009;transcript_name=NA12877_ch_T0000009;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	84339	84541	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=NA12877_ch_T0000009;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000009;transcript_name=NA12877_ch_T0000009;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	84542	87014	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=NA12877_ch_T0000009;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000009;transcript_name=NA12877_ch_T0000009;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	87015	87162	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=NA12877_ch_T0000009;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000009;transcript_name=NA12877_ch_T0000009;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	87036	87162	.	+	0	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=NA12877_ch_T0000009;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000009;transcript_name=NA12877_ch_T0000009;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	87036	87038	.	+	0	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=NA12877_ch_T0000009;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000009;transcript_name=NA12877_ch_T0000009;gene_name=PLCXD1;ID=start_codon:NA12877_ch_T0000009;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	87163	91522	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=NA12877_ch_T0000009;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000009;transcript_name=NA12877_ch_T0000009;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	91523	91577	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=NA12877_ch_T0000009;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000009;transcript_name=NA12877_ch_T0000009;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	91523	91577	.	+	2	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=NA12877_ch_T0000009;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000009;transcript_name=NA12877_ch_T0000009;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	84238	105528	100	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_G0000003;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=NA12877_ch_T0000010;Name=PLCXD1
NA12877_chrY	CAT	exon	84238	84541	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	84542	87014	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	87015	87162	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	87036	87162	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	87036	87038	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=start_codon:NA12877_ch_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	87163	91522	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	91523	91659	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	91523	91659	.	+	2	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	91660	93439	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	93440	93568	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	93440	93568	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	93569	94166	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	94167	94322	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	94167	94322	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	94323	95702	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	95703	95886	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	95703	95886	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	95887	101266	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	101267	105528	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000010:6;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	101267	101505	.	+	2	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	101503	101505	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=NA12877_ch_T0000010;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000010;transcript_name=NA12877_ch_T0000010;gene_name=PLCXD1;ID=stop_codon:NA12877_ch_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	86011	91619	100	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=NA12877_ch_T0000011;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_G0000003;transcript_name=NA12877_ch_T0000011;gene_name=PLCXD1;ID=NA12877_ch_T0000011;Name=PLCXD1
NA12877_chrY	CAT	exon	86011	86049	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=NA12877_ch_T0000011;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000011;transcript_name=NA12877_ch_T0000011;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	86050	87014	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=NA12877_ch_T0000011;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000011;transcript_name=NA12877_ch_T0000011;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	87015	87162	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=NA12877_ch_T0000011;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000011;transcript_name=NA12877_ch_T0000011;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	87036	87162	.	+	0	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=NA12877_ch_T0000011;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000011;transcript_name=NA12877_ch_T0000011;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	87036	87038	.	+	0	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=NA12877_ch_T0000011;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000011;transcript_name=NA12877_ch_T0000011;gene_name=PLCXD1;ID=start_codon:NA12877_ch_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	87163	91522	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=NA12877_ch_T0000011;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000011;transcript_name=NA12877_ch_T0000011;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	91523	91619	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=NA12877_ch_T0000011;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000011;transcript_name=NA12877_ch_T0000011;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	91523	91619	.	+	2	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=NA12877_ch_T0000011;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000011;transcript_name=NA12877_ch_T0000011;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	86314	94307	100	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_G0000003;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=NA12877_ch_T0000012;Name=PLCXD1
NA12877_chrY	CAT	exon	86314	86337	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	86338	87014	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	87015	87162	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	87036	87162	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	87036	87038	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=start_codon:NA12877_ch_T0000012;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	87163	91522	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	91523	91659	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	91523	91659	.	+	2	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	91660	93439	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	93440	93568	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	93440	93568	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	93569	94166	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	94167	94307	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000012:4;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	94167	94307	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=NA12877_ch_T0000012;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000012;transcript_name=NA12877_ch_T0000012;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	86328	94297	100	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_G0000003;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=NA12877_ch_T0000013;Name=PLCXD1
NA12877_chrY	CAT	exon	86328	86369	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	86370	87014	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	87015	87162	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	87036	87162	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	87036	87038	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=start_codon:NA12877_ch_T0000013;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	87163	91522	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	91523	91659	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	91523	91659	.	+	2	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	91660	93439	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	93440	93568	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000013:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	93440	93568	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	93569	94166	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000013:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	94167	94297	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000013:4;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	94167	94297	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=NA12877_ch_T0000013;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000013;transcript_name=NA12877_ch_T0000013;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000013:3;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	86583	93549	100	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=NA12877_ch_T0000014;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_G0000003;transcript_name=NA12877_ch_T0000014;gene_name=PLCXD1;ID=NA12877_ch_T0000014;Name=PLCXD1
NA12877_chrY	CAT	exon	86583	87162	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=NA12877_ch_T0000014;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000014;transcript_name=NA12877_ch_T0000014;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000014:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	87036	87162	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=NA12877_ch_T0000014;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000014;transcript_name=NA12877_ch_T0000014;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000014:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	87036	87038	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=NA12877_ch_T0000014;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000014;transcript_name=NA12877_ch_T0000014;gene_name=PLCXD1;ID=start_codon:NA12877_ch_T0000014;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	87163	91522	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=NA12877_ch_T0000014;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000014;transcript_name=NA12877_ch_T0000014;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000014:0;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	91523	91659	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=NA12877_ch_T0000014;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000014;transcript_name=NA12877_ch_T0000014;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000014:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	91523	91659	.	+	2	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=NA12877_ch_T0000014;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000014;transcript_name=NA12877_ch_T0000014;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000014:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	91660	93439	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=NA12877_ch_T0000014;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000014;transcript_name=NA12877_ch_T0000014;gene_name=PLCXD1;ID=intron:NA12877_ch_T0000014:1;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	93440	93549	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=NA12877_ch_T0000014;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000014;transcript_name=NA12877_ch_T0000014;gene_name=PLCXD1;ID=exon:NA12877_ch_T0000014:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	93440	93549	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=NA12877_ch_T0000014;gene_id=NA12877_ch_G0000003;Parent=NA12877_ch_T0000014;transcript_name=NA12877_ch_T0000014;gene_name=PLCXD1;ID=CDS:NA12877_ch_T0000014:2;Name=PLCXD1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	81548	84682	.	-	.	source_gene_common_name=ENSG00000310554;source_gene=ENSG00000310554.1;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;gene_id=NA12877_ch_G0000004;gene_biotype=lncRNA;gene_name=ENSG00000310554;gene_sources=liftoff;ID=NA12877_ch_G0000004;Name=ENSG00000310554
NA12877_chrY	CAT	transcript	81548	84682	1000	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.572;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=NA12877_ch_T0000007;gene_id=NA12877_ch_G0000004;Parent=NA12877_ch_G0000004;transcript_name=NA12877_ch_T0000007;gene_name=ENSG00000310554;ID=NA12877_ch_T0000007;Name=ENSG00000310554
NA12877_chrY	CAT	exon	81548	82374	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.572;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=NA12877_ch_T0000007;gene_id=NA12877_ch_G0000004;Parent=NA12877_ch_T0000007;transcript_name=NA12877_ch_T0000007;gene_name=ENSG00000310554;ID=exon:NA12877_ch_T0000007:0;Name=ENSG00000310554;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	82375	84342	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.572;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=NA12877_ch_T0000007;gene_id=NA12877_ch_G0000004;Parent=NA12877_ch_T0000007;transcript_name=NA12877_ch_T0000007;gene_name=ENSG00000310554;ID=intron:NA12877_ch_T0000007:0;Name=ENSG00000310554;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	84343	84682	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.572;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=NA12877_ch_T0000007;gene_id=NA12877_ch_G0000004;Parent=NA12877_ch_T0000007;transcript_name=NA12877_ch_T0000007;gene_name=ENSG00000310554;ID=exon:NA12877_ch_T0000007:1;Name=ENSG00000310554;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	105518	123435	.	-	.	source_gene_common_name=GTPBP6;source_gene=ENSG00000292358.2;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;gene_id=NA12877_ch_G0000005;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff,transMap,transMap_pairwise;ID=NA12877_ch_G0000005;Name=GTPBP6
NA12877_chrY	CAT	transcript	105518	123435	100	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_G0000005;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=NA12877_ch_T0000015;Name=GTPBP6
NA12877_chrY	CAT	exon	105518	107369	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	107246	107369	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	107246	107248	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=stop_codon:NA12877_ch_T0000015;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	107370	109165	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	109166	109318	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	109166	109318	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	109319	109537	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	109538	109686	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	109538	109686	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	109687	113224	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	113225	113433	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	113225	113433	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	113434	114668	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	114669	114827	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	114669	114827	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	114828	116132	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	116133	116200	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	116133	116200	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	116201	116870	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	116871	117001	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	116871	117001	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	117002	117206	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	117207	117277	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	117207	117277	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	117278	121551	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	121552	121689	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	121552	121689	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	121690	123075	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	123076	123435	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000015:9;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	123076	123424	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000015:9;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	123422	123424	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=NA12877_ch_T0000015;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000015;transcript_name=NA12877_ch_T0000015;gene_name=GTPBP6;ID=start_codon:NA12877_ch_T0000015;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	106701	114366	1000	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000016;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_G0000005;transcript_name=NA12877_ch_T0000016;gene_name=GTPBP6;ID=NA12877_ch_T0000016;Name=GTPBP6
NA12877_chrY	CAT	exon	106701	107369	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000016;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000016;transcript_name=NA12877_ch_T0000016;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	107370	109165	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000016;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000016;transcript_name=NA12877_ch_T0000016;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	109166	109318	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000016;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000016;transcript_name=NA12877_ch_T0000016;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	109319	109537	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000016;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000016;transcript_name=NA12877_ch_T0000016;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	109538	109686	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000016;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000016;transcript_name=NA12877_ch_T0000016;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	109687	113224	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000016;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000016;transcript_name=NA12877_ch_T0000016;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	113225	114142	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000016;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000016;transcript_name=NA12877_ch_T0000016;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	114143	114254	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000016;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000016;transcript_name=NA12877_ch_T0000016;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	114255	114366	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000016;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000016;transcript_name=NA12877_ch_T0000016;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	106701	114366	1000	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000017;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_G0000005;transcript_name=NA12877_ch_T0000017;gene_name=GTPBP6;ID=NA12877_ch_T0000017;Name=GTPBP6
NA12877_chrY	CAT	exon	106701	107369	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000017;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000017;transcript_name=NA12877_ch_T0000017;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	107370	109165	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000017;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000017;transcript_name=NA12877_ch_T0000017;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	109166	109318	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000017;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000017;transcript_name=NA12877_ch_T0000017;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	109319	109537	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000017;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000017;transcript_name=NA12877_ch_T0000017;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	109538	109686	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000017;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000017;transcript_name=NA12877_ch_T0000017;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	109687	113224	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000017;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000017;transcript_name=NA12877_ch_T0000017;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	113225	114115	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000017;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000017;transcript_name=NA12877_ch_T0000017;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	114116	114212	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000017;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000017;transcript_name=NA12877_ch_T0000017;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	114213	114366	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000017;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000017;transcript_name=NA12877_ch_T0000017;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	106701	114366	1000	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000018;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_G0000005;transcript_name=NA12877_ch_T0000018;gene_name=GTPBP6;ID=NA12877_ch_T0000018;Name=GTPBP6
NA12877_chrY	CAT	exon	106701	107369	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000018;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000018;transcript_name=NA12877_ch_T0000018;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000018:0;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	107370	109165	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000018;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000018;transcript_name=NA12877_ch_T0000018;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000018:0;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	109166	109318	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000018;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000018;transcript_name=NA12877_ch_T0000018;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000018:1;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	109319	109537	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000018;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000018;transcript_name=NA12877_ch_T0000018;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000018:1;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	109538	109686	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000018;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000018;transcript_name=NA12877_ch_T0000018;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000018:2;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	109687	113224	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000018;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000018;transcript_name=NA12877_ch_T0000018;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000018:2;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	113225	114366	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=273.363;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=NA12877_ch_T0000018;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000018;transcript_name=NA12877_ch_T0000018;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000018:3;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	106931	123433	100	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_G0000005;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=NA12877_ch_T0000019;Name=GTPBP6
NA12877_chrY	CAT	exon	106931	107369	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000019:0;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	107246	107369	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000019:0;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	107246	107248	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=stop_codon:NA12877_ch_T0000019;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	107370	109165	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000019:0;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	109166	109318	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000019:1;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	109166	109318	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000019:1;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	109319	109537	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000019:1;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	109538	109686	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000019:2;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	109538	109686	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000019:2;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	109687	113224	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000019:2;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	113225	113433	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000019:3;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	113225	113433	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000019:3;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	113434	114668	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000019:3;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	114669	114827	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000019:4;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	114669	114827	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000019:4;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	114828	116132	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000019:4;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	116133	116200	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000019:5;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	116133	116200	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000019:5;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	116201	116870	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000019:5;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	116871	117001	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000019:6;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	116871	117001	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000019:6;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	117002	117206	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000019:6;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	117207	117277	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000019:7;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	117207	117277	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000019:7;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	117278	121551	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000019:7;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	121552	121689	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000019:8;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	121552	121689	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000019:8;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	121690	123075	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=intron:NA12877_ch_T0000019:8;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	123076	123433	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=exon:NA12877_ch_T0000019:9;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	123076	123424	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=CDS:NA12877_ch_T0000019:9;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	123422	123424	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=NA12877_ch_T0000019;gene_id=NA12877_ch_G0000005;Parent=NA12877_ch_T0000019;transcript_name=NA12877_ch_T0000019;gene_name=GTPBP6;ID=start_codon:NA12877_ch_T0000019;Name=GTPBP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	125624	126934	.	+	.	source_gene_common_name=LINC00685;source_gene=ENSG00000292342.1;gene_id=NA12877_ch_G0000006;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff,transMap,transMap_pairwise;ID=NA12877_ch_G0000006;Name=LINC00685
NA12877_chrY	CAT	transcript	125624	126344	1000	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=NA12877_ch_T0000020;gene_id=NA12877_ch_G0000006;Parent=NA12877_ch_G0000006;transcript_name=NA12877_ch_T0000020;gene_name=LINC00685;ID=NA12877_ch_T0000020;Name=LINC00685
NA12877_chrY	CAT	exon	125624	125882	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=NA12877_ch_T0000020;gene_id=NA12877_ch_G0000006;Parent=NA12877_ch_T0000020;transcript_name=NA12877_ch_T0000020;gene_name=LINC00685;ID=exon:NA12877_ch_T0000020:0;Name=LINC00685;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	125883	126260	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=NA12877_ch_T0000020;gene_id=NA12877_ch_G0000006;Parent=NA12877_ch_T0000020;transcript_name=NA12877_ch_T0000020;gene_name=LINC00685;ID=intron:NA12877_ch_T0000020:0;Name=LINC00685;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	126261	126344	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=NA12877_ch_T0000020;gene_id=NA12877_ch_G0000006;Parent=NA12877_ch_T0000020;transcript_name=NA12877_ch_T0000020;gene_name=LINC00685;ID=exon:NA12877_ch_T0000020:1;Name=LINC00685;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	125624	126934	1000	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=NA12877_ch_T0000021;gene_id=NA12877_ch_G0000006;Parent=NA12877_ch_G0000006;transcript_name=NA12877_ch_T0000021;gene_name=LINC00685;ID=NA12877_ch_T0000021;Name=LINC00685
NA12877_chrY	CAT	exon	125624	125882	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=NA12877_ch_T0000021;gene_id=NA12877_ch_G0000006;Parent=NA12877_ch_T0000021;transcript_name=NA12877_ch_T0000021;gene_name=LINC00685;ID=exon:NA12877_ch_T0000021:0;Name=LINC00685;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	125883	126765	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=NA12877_ch_T0000021;gene_id=NA12877_ch_G0000006;Parent=NA12877_ch_T0000021;transcript_name=NA12877_ch_T0000021;gene_name=LINC00685;ID=intron:NA12877_ch_T0000021:0;Name=LINC00685;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	126766	126934	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=NA12877_ch_T0000021;gene_id=NA12877_ch_G0000006;Parent=NA12877_ch_T0000021;transcript_name=NA12877_ch_T0000021;gene_name=LINC00685;ID=exon:NA12877_ch_T0000021:1;Name=LINC00685;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	125624	126498	1000	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=NA12877_ch_T0000022;gene_id=NA12877_ch_G0000006;Parent=NA12877_ch_G0000006;transcript_name=NA12877_ch_T0000022;gene_name=LINC00685;ID=NA12877_ch_T0000022;Name=LINC00685
NA12877_chrY	CAT	exon	125624	125882	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=NA12877_ch_T0000022;gene_id=NA12877_ch_G0000006;Parent=NA12877_ch_T0000022;transcript_name=NA12877_ch_T0000022;gene_name=LINC00685;ID=exon:NA12877_ch_T0000022:0;Name=LINC00685;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	125883	126315	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=NA12877_ch_T0000022;gene_id=NA12877_ch_G0000006;Parent=NA12877_ch_T0000022;transcript_name=NA12877_ch_T0000022;gene_name=LINC00685;ID=intron:NA12877_ch_T0000022:0;Name=LINC00685;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	126316	126498	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=NA12877_ch_T0000022;gene_id=NA12877_ch_G0000006;Parent=NA12877_ch_T0000022;transcript_name=NA12877_ch_T0000022;gene_name=LINC00685;ID=exon:NA12877_ch_T0000022:1;Name=LINC00685;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	140711	198141	.	-	.	source_gene_common_name=PPP2R3B;source_gene=ENSG00000292327.1;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;gene_id=NA12877_ch_G0000007;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000007;Name=PPP2R3B
NA12877_chrY	CAT	transcript	140711	198093	100	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_G0000007;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=NA12877_ch_T0000023;Name=PPP2R3B
NA12877_chrY	CAT	exon	140711	141294	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	141144	141294	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	141144	141146	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=stop_codon:NA12877_ch_T0000023;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	141295	145380	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	145381	145487	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	145381	145487	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	145488	145554	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	145555	145673	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	145555	145673	.	-	2	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	145674	147581	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	147582	147757	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	147582	147757	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	147758	148123	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	148124	148213	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	148124	148213	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	148214	148699	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	148700	148748	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	148700	148748	.	-	2	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	148749	152305	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	152306	152462	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	152306	152462	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	152463	152963	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	152964	153050	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	152964	153050	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	153051	153490	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000023:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	153491	153565	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	153491	153565	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	153566	154023	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000023:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	154024	154126	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	154024	154126	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	154127	154379	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000023:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	154380	154483	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	154380	154483	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	154484	168472	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000023:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	168473	168658	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	168473	168658	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	168659	197553	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000023:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	197554	198093	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000023:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	197554	197877	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000023:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	197875	197877	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=NA12877_ch_T0000023;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000023;transcript_name=NA12877_ch_T0000023;gene_name=PPP2R3B;ID=start_codon:NA12877_ch_T0000023;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	141012	148528	1000	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=NA12877_ch_T0000024;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_G0000007;transcript_name=NA12877_ch_T0000024;gene_name=PPP2R3B;ID=NA12877_ch_T0000024;Name=PPP2R3B
NA12877_chrY	CAT	exon	141012	141294	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=NA12877_ch_T0000024;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000024;transcript_name=NA12877_ch_T0000024;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	141295	145380	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=NA12877_ch_T0000024;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000024;transcript_name=NA12877_ch_T0000024;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	145381	145673	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=NA12877_ch_T0000024;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000024;transcript_name=NA12877_ch_T0000024;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	145674	147581	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=NA12877_ch_T0000024;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000024;transcript_name=NA12877_ch_T0000024;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	147582	147757	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=NA12877_ch_T0000024;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000024;transcript_name=NA12877_ch_T0000024;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	147758	148123	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=NA12877_ch_T0000024;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000024;transcript_name=NA12877_ch_T0000024;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	148124	148528	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=NA12877_ch_T0000024;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000024;transcript_name=NA12877_ch_T0000024;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	141012	148528	1000	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000025;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_G0000007;transcript_name=NA12877_ch_T0000025;gene_name=PPP2R3B;ID=NA12877_ch_T0000025;Name=PPP2R3B
NA12877_chrY	CAT	exon	141012	141294	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000025;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000025;transcript_name=NA12877_ch_T0000025;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	141295	145380	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000025;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000025;transcript_name=NA12877_ch_T0000025;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	145381	145487	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000025;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000025;transcript_name=NA12877_ch_T0000025;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	145488	145554	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000025;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000025;transcript_name=NA12877_ch_T0000025;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	145555	145673	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000025;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000025;transcript_name=NA12877_ch_T0000025;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	145674	147581	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000025;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000025;transcript_name=NA12877_ch_T0000025;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	147582	147757	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000025;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000025;transcript_name=NA12877_ch_T0000025;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	147758	148123	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000025;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000025;transcript_name=NA12877_ch_T0000025;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	148124	148528	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000025;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000025;transcript_name=NA12877_ch_T0000025;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000025:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	141016	154114	1000	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_G0000007;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=NA12877_ch_T0000026;Name=PPP2R3B
NA12877_chrY	CAT	exon	141016	145673	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	145674	147581	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	147582	147757	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	147758	148123	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	148124	148748	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	148749	152305	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	152306	152462	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	152463	152963	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	152964	153050	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	153051	153490	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	153491	153565	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	153566	154023	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	154024	154114	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=NA12877_ch_T0000026;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000026;transcript_name=NA12877_ch_T0000026;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000026:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	141016	154114	1000	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_G0000007;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=NA12877_ch_T0000027;Name=PPP2R3B
NA12877_chrY	CAT	exon	141016	145487	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	145488	145554	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	145555	145673	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	145674	147581	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	147582	147757	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	147758	148123	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	148124	148748	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	148749	152305	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	152306	152462	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	152463	152963	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	152964	153050	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	153051	153490	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	153491	153565	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	153566	154023	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	154024	154114	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=NA12877_ch_T0000027;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000027;transcript_name=NA12877_ch_T0000027;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000027:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	145390	152419	1000	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=NA12877_ch_T0000028;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_G0000007;transcript_name=NA12877_ch_T0000028;gene_name=PPP2R3B;ID=NA12877_ch_T0000028;Name=PPP2R3B
NA12877_chrY	CAT	exon	145390	145673	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=NA12877_ch_T0000028;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000028;transcript_name=NA12877_ch_T0000028;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000028:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	145674	147581	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=NA12877_ch_T0000028;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000028;transcript_name=NA12877_ch_T0000028;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000028:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	147582	147757	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=NA12877_ch_T0000028;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000028;transcript_name=NA12877_ch_T0000028;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000028:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	147758	148123	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=NA12877_ch_T0000028;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000028;transcript_name=NA12877_ch_T0000028;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000028:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	148124	148213	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=NA12877_ch_T0000028;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000028;transcript_name=NA12877_ch_T0000028;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000028:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	148214	148699	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=NA12877_ch_T0000028;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000028;transcript_name=NA12877_ch_T0000028;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000028:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	148700	148748	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=NA12877_ch_T0000028;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000028;transcript_name=NA12877_ch_T0000028;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000028:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	148749	152305	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=NA12877_ch_T0000028;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000028;transcript_name=NA12877_ch_T0000028;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000028:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	152306	152419	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=NA12877_ch_T0000028;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000028;transcript_name=NA12877_ch_T0000028;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000028:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	147582	152416	1000	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=NA12877_ch_T0000029;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_G0000007;transcript_name=NA12877_ch_T0000029;gene_name=PPP2R3B;ID=NA12877_ch_T0000029;Name=PPP2R3B
NA12877_chrY	CAT	exon	147582	147757	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=NA12877_ch_T0000029;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000029;transcript_name=NA12877_ch_T0000029;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000029:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	147758	148123	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=NA12877_ch_T0000029;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000029;transcript_name=NA12877_ch_T0000029;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000029:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	148124	148213	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=NA12877_ch_T0000029;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000029;transcript_name=NA12877_ch_T0000029;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000029:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	148214	148699	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=NA12877_ch_T0000029;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000029;transcript_name=NA12877_ch_T0000029;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000029:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	148700	149054	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=NA12877_ch_T0000029;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000029;transcript_name=NA12877_ch_T0000029;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000029:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	149055	152305	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=NA12877_ch_T0000029;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000029;transcript_name=NA12877_ch_T0000029;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000029:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	152306	152416	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=NA12877_ch_T0000029;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000029;transcript_name=NA12877_ch_T0000029;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000029:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	148728	153304	1000	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=NA12877_ch_T0000030;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_G0000007;transcript_name=NA12877_ch_T0000030;gene_name=PPP2R3B;ID=NA12877_ch_T0000030;Name=PPP2R3B
NA12877_chrY	CAT	exon	148728	148748	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=NA12877_ch_T0000030;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000030;transcript_name=NA12877_ch_T0000030;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000030:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	148749	152305	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=NA12877_ch_T0000030;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000030;transcript_name=NA12877_ch_T0000030;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000030:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	152306	152462	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=NA12877_ch_T0000030;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000030;transcript_name=NA12877_ch_T0000030;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000030:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	152463	152963	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=NA12877_ch_T0000030;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000030;transcript_name=NA12877_ch_T0000030;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000030:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	152964	153304	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=NA12877_ch_T0000030;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000030;transcript_name=NA12877_ch_T0000030;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000030:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	151686	198141	1000	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_G0000007;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=NA12877_ch_T0000031;Name=PPP2R3B
NA12877_chrY	CAT	exon	151686	152462	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000031:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	152463	152963	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000031:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	152964	153050	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000031:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	153051	153490	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000031:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	153491	153565	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000031:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	153566	154023	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000031:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	154024	154126	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000031:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	154127	154379	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000031:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	154380	154483	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000031:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	154484	168472	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000031:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	168473	168658	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000031:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	168659	169322	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000031:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	169323	169400	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000031:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	169401	197553	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000031:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	197554	198141	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.95;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=NA12877_ch_T0000031;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000031;transcript_name=NA12877_ch_T0000031;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000031:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	153427	168584	1000	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=NA12877_ch_T0000032;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_G0000007;transcript_name=NA12877_ch_T0000032;gene_name=PPP2R3B;ID=NA12877_ch_T0000032;Name=PPP2R3B
NA12877_chrY	CAT	exon	153427	153565	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=NA12877_ch_T0000032;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000032;transcript_name=NA12877_ch_T0000032;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000032:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	153566	154023	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=NA12877_ch_T0000032;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000032;transcript_name=NA12877_ch_T0000032;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000032:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	154024	154126	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=NA12877_ch_T0000032;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000032;transcript_name=NA12877_ch_T0000032;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000032:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	154127	154379	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=NA12877_ch_T0000032;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000032;transcript_name=NA12877_ch_T0000032;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000032:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	154380	154483	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=NA12877_ch_T0000032;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000032;transcript_name=NA12877_ch_T0000032;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000032:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	154484	168472	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=NA12877_ch_T0000032;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000032;transcript_name=NA12877_ch_T0000032;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000032:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	168473	168584	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=NA12877_ch_T0000032;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000032;transcript_name=NA12877_ch_T0000032;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000032:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	153510	154628	1000	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=NA12877_ch_T0000033;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_G0000007;transcript_name=NA12877_ch_T0000033;gene_name=PPP2R3B;ID=NA12877_ch_T0000033;Name=PPP2R3B
NA12877_chrY	CAT	exon	153510	153565	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=NA12877_ch_T0000033;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000033;transcript_name=NA12877_ch_T0000033;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000033:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	153566	154023	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=NA12877_ch_T0000033;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000033;transcript_name=NA12877_ch_T0000033;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000033:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	154024	154126	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=NA12877_ch_T0000033;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000033;transcript_name=NA12877_ch_T0000033;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000033:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	154127	154379	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=NA12877_ch_T0000033;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000033;transcript_name=NA12877_ch_T0000033;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000033:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	154380	154628	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=NA12877_ch_T0000033;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000033;transcript_name=NA12877_ch_T0000033;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000033:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	154401	185173	100	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=NA12877_ch_T0000034;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_G0000007;transcript_name=NA12877_ch_T0000034;gene_name=PPP2R3B;ID=NA12877_ch_T0000034;Name=PPP2R3B
NA12877_chrY	CAT	exon	154401	154483	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=NA12877_ch_T0000034;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000034;transcript_name=NA12877_ch_T0000034;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000034:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	154401	154483	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=NA12877_ch_T0000034;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000034;transcript_name=NA12877_ch_T0000034;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000034:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	154484	168472	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=NA12877_ch_T0000034;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000034;transcript_name=NA12877_ch_T0000034;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000034:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	168473	168658	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=NA12877_ch_T0000034;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000034;transcript_name=NA12877_ch_T0000034;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000034:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	168473	168658	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=NA12877_ch_T0000034;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000034;transcript_name=NA12877_ch_T0000034;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000034:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	168659	184660	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=NA12877_ch_T0000034;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000034;transcript_name=NA12877_ch_T0000034;gene_name=PPP2R3B;ID=intron:NA12877_ch_T0000034:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	184661	185173	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=NA12877_ch_T0000034;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000034;transcript_name=NA12877_ch_T0000034;gene_name=PPP2R3B;ID=exon:NA12877_ch_T0000034:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	184661	184900	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=NA12877_ch_T0000034;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000034;transcript_name=NA12877_ch_T0000034;gene_name=PPP2R3B;ID=CDS:NA12877_ch_T0000034:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	184898	184900	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=NA12877_ch_T0000034;gene_id=NA12877_ch_G0000007;Parent=NA12877_ch_T0000034;transcript_name=NA12877_ch_T0000034;gene_name=PPP2R3B;ID=start_codon:NA12877_ch_T0000034;Name=PPP2R3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	198148	323625	.	+	.	source_gene_common_name=ENSG00000292349;source_gene=ENSG00000292349.2;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;gene_id=NA12877_ch_G0000008;gene_biotype=lncRNA;gene_name=ENSG00000292349;gene_sources=liftoff;ID=NA12877_ch_G0000008;Name=ENSG00000292349
NA12877_chrY	CAT	transcript	198148	232743	1000	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=NA12877_ch_T0000035;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_G0000008;transcript_name=NA12877_ch_T0000035;gene_name=ENSG00000292349;ID=NA12877_ch_T0000035;Name=ENSG00000292349
NA12877_chrY	CAT	exon	198148	198258	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=NA12877_ch_T0000035;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000035;transcript_name=NA12877_ch_T0000035;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000035:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	198259	232431	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=NA12877_ch_T0000035;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000035;transcript_name=NA12877_ch_T0000035;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000035:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	232432	232743	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=NA12877_ch_T0000035;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000035;transcript_name=NA12877_ch_T0000035;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000035:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	198152	232738	1000	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=NA12877_ch_T0000036;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_G0000008;transcript_name=NA12877_ch_T0000036;gene_name=ENSG00000292349;ID=NA12877_ch_T0000036;Name=ENSG00000292349
NA12877_chrY	CAT	exon	198152	198258	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=NA12877_ch_T0000036;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000036;transcript_name=NA12877_ch_T0000036;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000036:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	198259	229729	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=NA12877_ch_T0000036;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000036;transcript_name=NA12877_ch_T0000036;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000036:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	229730	230218	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=NA12877_ch_T0000036;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000036;transcript_name=NA12877_ch_T0000036;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000036:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	230219	232431	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=NA12877_ch_T0000036;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000036;transcript_name=NA12877_ch_T0000036;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000036:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	232432	232738	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=NA12877_ch_T0000036;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000036;transcript_name=NA12877_ch_T0000036;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000036:2;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	198166	217643	1000	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.558;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=NA12877_ch_T0000037;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_G0000008;transcript_name=NA12877_ch_T0000037;gene_name=ENSG00000292349;ID=NA12877_ch_T0000037;Name=ENSG00000292349
NA12877_chrY	CAT	exon	198166	198476	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.558;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=NA12877_ch_T0000037;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000037;transcript_name=NA12877_ch_T0000037;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000037:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	198477	216592	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.558;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=NA12877_ch_T0000037;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000037;transcript_name=NA12877_ch_T0000037;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000037:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	216593	217643	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.558;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=NA12877_ch_T0000037;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000037;transcript_name=NA12877_ch_T0000037;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000037:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	198169	282535	1000	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=NA12877_ch_T0000038;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_G0000008;transcript_name=NA12877_ch_T0000038;gene_name=ENSG00000292349;ID=NA12877_ch_T0000038;Name=ENSG00000292349
NA12877_chrY	CAT	exon	198169	198476	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=NA12877_ch_T0000038;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000038;transcript_name=NA12877_ch_T0000038;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000038:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	198477	269612	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=NA12877_ch_T0000038;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000038;transcript_name=NA12877_ch_T0000038;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000038:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	269613	270225	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=NA12877_ch_T0000038;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000038;transcript_name=NA12877_ch_T0000038;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000038:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	270226	279903	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=NA12877_ch_T0000038;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000038;transcript_name=NA12877_ch_T0000038;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000038:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	279904	280024	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=NA12877_ch_T0000038;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000038;transcript_name=NA12877_ch_T0000038;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000038:2;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	280025	281100	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=NA12877_ch_T0000038;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000038;transcript_name=NA12877_ch_T0000038;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000038:2;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	281101	281299	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=NA12877_ch_T0000038;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000038;transcript_name=NA12877_ch_T0000038;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000038:3;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	281300	281905	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=NA12877_ch_T0000038;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000038;transcript_name=NA12877_ch_T0000038;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000038:3;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	281906	282535	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=NA12877_ch_T0000038;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000038;transcript_name=NA12877_ch_T0000038;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000038:4;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	198221	323625	1000	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_G0000008;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=NA12877_ch_T0000039;Name=ENSG00000292349
NA12877_chrY	CAT	exon	198221	198476	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000039:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	198477	246336	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000039:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	246337	246451	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000039:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	246452	248367	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000039:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	248368	248534	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000039:2;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	248535	269612	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000039:2;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	269613	270225	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000039:3;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	270226	294817	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000039:3;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	294818	294958	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000039:4;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	294959	301499	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000039:4;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	301500	301615	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000039:5;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	301616	307561	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000039:5;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	307562	307635	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000039:6;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	307636	322562	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000039:6;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	322563	323625	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.961;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=NA12877_ch_T0000039;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000039;transcript_name=NA12877_ch_T0000039;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000039:7;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	216884	229488	1000	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=NA12877_ch_T0000041;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_G0000008;transcript_name=NA12877_ch_T0000041;gene_name=ENSG00000292349;ID=NA12877_ch_T0000041;Name=ENSG00000292349
NA12877_chrY	CAT	exon	216884	217516	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=NA12877_ch_T0000041;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000041;transcript_name=NA12877_ch_T0000041;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000041:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	217517	220043	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=NA12877_ch_T0000041;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000041;transcript_name=NA12877_ch_T0000041;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000041:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	220044	220290	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=NA12877_ch_T0000041;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000041;transcript_name=NA12877_ch_T0000041;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000041:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	220291	226922	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=NA12877_ch_T0000041;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000041;transcript_name=NA12877_ch_T0000041;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000041:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	226923	227211	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=NA12877_ch_T0000041;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000041;transcript_name=NA12877_ch_T0000041;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000041:2;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	227212	229114	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=NA12877_ch_T0000041;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000041;transcript_name=NA12877_ch_T0000041;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000041:2;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	229115	229488	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.806;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=NA12877_ch_T0000041;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000041;transcript_name=NA12877_ch_T0000041;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000041:3;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	217140	280201	1000	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=NA12877_ch_T0000042;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_G0000008;transcript_name=NA12877_ch_T0000042;gene_name=ENSG00000292349;ID=NA12877_ch_T0000042;Name=ENSG00000292349
NA12877_chrY	CAT	exon	217140	217487	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=NA12877_ch_T0000042;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000042;transcript_name=NA12877_ch_T0000042;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000042:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	217488	269612	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=NA12877_ch_T0000042;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000042;transcript_name=NA12877_ch_T0000042;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000042:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	269613	270225	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=NA12877_ch_T0000042;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000042;transcript_name=NA12877_ch_T0000042;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000042:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	270226	279903	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=NA12877_ch_T0000042;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000042;transcript_name=NA12877_ch_T0000042;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000042:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	279904	280201	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=NA12877_ch_T0000042;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000042;transcript_name=NA12877_ch_T0000042;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000042:2;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	225602	227242	1000	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=NA12877_ch_T0000043;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_G0000008;transcript_name=NA12877_ch_T0000043;gene_name=ENSG00000292349;ID=NA12877_ch_T0000043;Name=ENSG00000292349
NA12877_chrY	CAT	exon	225602	226047	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=NA12877_ch_T0000043;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000043;transcript_name=NA12877_ch_T0000043;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000043:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	226048	226922	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=NA12877_ch_T0000043;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000043;transcript_name=NA12877_ch_T0000043;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000043:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	226923	227242	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=NA12877_ch_T0000043;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000043;transcript_name=NA12877_ch_T0000043;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000043:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	226922	232743	1000	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=NA12877_ch_T0000044;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_G0000008;transcript_name=NA12877_ch_T0000044;gene_name=ENSG00000292349;ID=NA12877_ch_T0000044;Name=ENSG00000292349
NA12877_chrY	CAT	exon	226922	226985	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=NA12877_ch_T0000044;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000044;transcript_name=NA12877_ch_T0000044;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000044:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	226986	229594	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=NA12877_ch_T0000044;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000044;transcript_name=NA12877_ch_T0000044;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000044:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	229595	230218	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=NA12877_ch_T0000044;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000044;transcript_name=NA12877_ch_T0000044;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000044:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	230219	232431	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=NA12877_ch_T0000044;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000044;transcript_name=NA12877_ch_T0000044;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000044:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	232432	232743	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=NA12877_ch_T0000044;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000044;transcript_name=NA12877_ch_T0000044;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000044:2;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	229954	232740	1000	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=NA12877_ch_T0000045;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_G0000008;transcript_name=NA12877_ch_T0000045;gene_name=ENSG00000292349;ID=NA12877_ch_T0000045;Name=ENSG00000292349
NA12877_chrY	CAT	exon	229954	230159	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=NA12877_ch_T0000045;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000045;transcript_name=NA12877_ch_T0000045;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000045:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	230160	232431	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=NA12877_ch_T0000045;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000045;transcript_name=NA12877_ch_T0000045;gene_name=ENSG00000292349;ID=intron:NA12877_ch_T0000045:0;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	232432	232740	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=NA12877_ch_T0000045;gene_id=NA12877_ch_G0000008;Parent=NA12877_ch_T0000045;transcript_name=NA12877_ch_T0000045;gene_name=ENSG00000292349;ID=exon:NA12877_ch_T0000045:1;Name=ENSG00000292349;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	199286	199575	.	-	.	source_gene_common_name=Metazoa_SRP;source_gene=ENSG00000292350.1;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;gene_id=NA12877_ch_G0000009;gene_biotype=misc_RNA;gene_name=Metazoa_SRP;gene_sources=liftoff;ID=NA12877_ch_G0000009;Name=Metazoa_SRP
NA12877_chrY	CAT	transcript	199286	199575	1000	-	.	source_transcript=ENST00000711149.1;source_transcript_name=Metazoa_SRP.216-201;source_gene=ENSG00000292350.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000292350.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000711149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711149.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Metazoa_SRP;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;transcript_id=NA12877_ch_T0000040;gene_id=NA12877_ch_G0000009;Parent=NA12877_ch_G0000009;transcript_name=NA12877_ch_T0000040;gene_name=Metazoa_SRP;ID=NA12877_ch_T0000040;Name=Metazoa_SRP
NA12877_chrY	CAT	exon	199286	199575	.	-	.	source_transcript=ENST00000711149.1;source_transcript_name=Metazoa_SRP.216-201;source_gene=ENSG00000292350.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000292350.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000711149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711149.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Metazoa_SRP;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;transcript_id=NA12877_ch_T0000040;gene_id=NA12877_ch_G0000009;Parent=NA12877_ch_T0000040;transcript_name=NA12877_ch_T0000040;gene_name=Metazoa_SRP;ID=exon:NA12877_ch_T0000040:0;Name=Metazoa_SRP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	335726	336053	.	-	.	source_gene_common_name=FABP5P13;source_gene=ENSG00000292352.1;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;gene_id=NA12877_ch_G0000010;gene_biotype=processed_pseudogene;gene_name=FABP5P13;gene_sources=liftoff;ID=NA12877_ch_G0000010;Name=FABP5P13
NA12877_chrY	CAT	transcript	335726	336053	1000	-	.	source_transcript=ENST00000711147.1;source_transcript_name=FABP5P13-204;source_gene=ENSG00000292352.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292352.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711147.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711147.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FABP5P13;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;transcript_id=NA12877_ch_T0000046;gene_id=NA12877_ch_G0000010;Parent=NA12877_ch_G0000010;transcript_name=NA12877_ch_T0000046;gene_name=FABP5P13;ID=NA12877_ch_T0000046;Name=FABP5P13
NA12877_chrY	CAT	exon	335726	336053	.	-	.	source_transcript=ENST00000711147.1;source_transcript_name=FABP5P13-204;source_gene=ENSG00000292352.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292352.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711147.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711147.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FABP5P13;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;transcript_id=NA12877_ch_T0000046;gene_id=NA12877_ch_G0000010;Parent=NA12877_ch_T0000046;transcript_name=NA12877_ch_T0000046;gene_name=FABP5P13;ID=exon:NA12877_ch_T0000046:0;Name=FABP5P13;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	360690	360806	.	-	.	source_gene_common_name=KRT18P53;source_gene=ENSG00000292353.1;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;gene_id=NA12877_ch_G0000011;gene_biotype=processed_pseudogene;gene_name=KRT18P53;gene_sources=liftoff;ID=NA12877_ch_G0000011;Name=KRT18P53
NA12877_chrY	CAT	transcript	360690	360806	1000	-	.	source_transcript=ENST00000711146.1;source_transcript_name=KRT18P53-204;source_gene=ENSG00000292353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711146.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711146.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P53;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;transcript_id=NA12877_ch_T0000047;gene_id=NA12877_ch_G0000011;Parent=NA12877_ch_G0000011;transcript_name=NA12877_ch_T0000047;gene_name=KRT18P53;ID=NA12877_ch_T0000047;Name=KRT18P53
NA12877_chrY	CAT	exon	360690	360806	.	-	.	source_transcript=ENST00000711146.1;source_transcript_name=KRT18P53-204;source_gene=ENSG00000292353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711146.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711146.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P53;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;transcript_id=NA12877_ch_T0000047;gene_id=NA12877_ch_G0000011;Parent=NA12877_ch_T0000047;transcript_name=NA12877_ch_T0000047;gene_name=KRT18P53;ID=exon:NA12877_ch_T0000047:0;Name=KRT18P53;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	417103	417918	.	+	.	source_gene_common_name=ENSG00000310543;source_gene=ENSG00000310543.1;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;gene_id=NA12877_ch_G0000012;gene_biotype=lncRNA;gene_name=ENSG00000310543;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000012;Name=ENSG00000310543
NA12877_chrY	CAT	transcript	417103	417918	1000	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=NA12877_ch_T0000048;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_G0000012;transcript_name=NA12877_ch_T0000048;gene_name=ENSG00000310543;ID=NA12877_ch_T0000048;Name=ENSG00000310543
NA12877_chrY	CAT	exon	417103	417498	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=NA12877_ch_T0000048;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_T0000048;transcript_name=NA12877_ch_T0000048;gene_name=ENSG00000310543;ID=exon:NA12877_ch_T0000048:0;Name=ENSG00000310543;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	417499	417674	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=NA12877_ch_T0000048;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_T0000048;transcript_name=NA12877_ch_T0000048;gene_name=ENSG00000310543;ID=intron:NA12877_ch_T0000048:0;Name=ENSG00000310543;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	417675	417918	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=NA12877_ch_T0000048;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_T0000048;transcript_name=NA12877_ch_T0000048;gene_name=ENSG00000310543;ID=exon:NA12877_ch_T0000048:1;Name=ENSG00000310543;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	417193	417918	1000	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850703.1;transcript_id=NA12877_ch_T0000049;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_G0000012;transcript_name=NA12877_ch_T0000049;gene_name=ENSG00000310543;ID=NA12877_ch_T0000049;Name=ENSG00000310543
NA12877_chrY	CAT	exon	417193	417918	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850703.1;transcript_id=NA12877_ch_T0000049;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_T0000049;transcript_name=NA12877_ch_T0000049;gene_name=ENSG00000310543;ID=exon:NA12877_ch_T0000049:0;Name=ENSG00000310543;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	417193	417918	1000	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=NA12877_ch_T0000050;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_G0000012;transcript_name=NA12877_ch_T0000050;gene_name=ENSG00000310543;ID=NA12877_ch_T0000050;Name=ENSG00000310543
NA12877_chrY	CAT	exon	417193	417498	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=NA12877_ch_T0000050;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_T0000050;transcript_name=NA12877_ch_T0000050;gene_name=ENSG00000310543;ID=exon:NA12877_ch_T0000050:0;Name=ENSG00000310543;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	417499	417571	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=NA12877_ch_T0000050;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_T0000050;transcript_name=NA12877_ch_T0000050;gene_name=ENSG00000310543;ID=intron:NA12877_ch_T0000050:0;Name=ENSG00000310543;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	417572	417918	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=NA12877_ch_T0000050;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_T0000050;transcript_name=NA12877_ch_T0000050;gene_name=ENSG00000310543;ID=exon:NA12877_ch_T0000050:1;Name=ENSG00000310543;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	417215	417918	1000	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=NA12877_ch_T0000051;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_G0000012;transcript_name=NA12877_ch_T0000051;gene_name=ENSG00000310543;ID=NA12877_ch_T0000051;Name=ENSG00000310543
NA12877_chrY	CAT	exon	417215	417498	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=NA12877_ch_T0000051;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_T0000051;transcript_name=NA12877_ch_T0000051;gene_name=ENSG00000310543;ID=exon:NA12877_ch_T0000051:0;Name=ENSG00000310543;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	417499	417632	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=NA12877_ch_T0000051;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_T0000051;transcript_name=NA12877_ch_T0000051;gene_name=ENSG00000310543;ID=intron:NA12877_ch_T0000051:0;Name=ENSG00000310543;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	417633	417918	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=NA12877_ch_T0000051;gene_id=NA12877_ch_G0000012;Parent=NA12877_ch_T0000051;transcript_name=NA12877_ch_T0000051;gene_name=ENSG00000310543;ID=exon:NA12877_ch_T0000051:1;Name=ENSG00000310543;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	440827	474685	.	+	.	source_gene_common_name=SHOX;source_gene=ENSG00000292354.1;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;gene_id=NA12877_ch_G0000013;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff;ID=NA12877_ch_G0000013;Name=SHOX
NA12877_chrY	CAT	transcript	440827	474685	100	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_G0000013;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=NA12877_ch_T0000052;Name=SHOX
NA12877_chrY	CAT	exon	440827	441087	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=exon:NA12877_ch_T0000052:0;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	441088	446592	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=intron:NA12877_ch_T0000052:0;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	446593	447301	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=exon:NA12877_ch_T0000052:1;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	447025	447301	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=CDS:NA12877_ch_T0000052:0;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	447025	447027	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=start_codon:NA12877_ch_T0000052;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	447302	450744	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=intron:NA12877_ch_T0000052:1;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	450745	450953	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=exon:NA12877_ch_T0000052:2;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	450745	450953	.	+	2	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=CDS:NA12877_ch_T0000052:1;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	450954	456762	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=intron:NA12877_ch_T0000052:2;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	456763	456820	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=exon:NA12877_ch_T0000052:3;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	456763	456820	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=CDS:NA12877_ch_T0000052:2;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	456821	456940	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=intron:NA12877_ch_T0000052:3;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	456941	457029	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=exon:NA12877_ch_T0000052:4;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	456941	457029	.	+	2	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=CDS:NA12877_ch_T0000052:3;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	457030	474058	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=intron:NA12877_ch_T0000052:4;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	474059	474685	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=exon:NA12877_ch_T0000052:5;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	474059	474103	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=CDS:NA12877_ch_T0000052:4;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	474101	474103	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=NA12877_ch_T0000052;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000052;transcript_name=NA12877_ch_T0000052;gene_name=SHOX;ID=stop_codon:NA12877_ch_T0000052;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	440827	462762	100	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_G0000013;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=NA12877_ch_T0000053;Name=SHOX
NA12877_chrY	CAT	exon	440827	441087	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=exon:NA12877_ch_T0000053:0;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	441088	446592	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=intron:NA12877_ch_T0000053:0;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	446593	447301	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=exon:NA12877_ch_T0000053:1;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	447025	447301	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=CDS:NA12877_ch_T0000053:0;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	447025	447027	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=start_codon:NA12877_ch_T0000053;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	447302	450744	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=intron:NA12877_ch_T0000053:1;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	450745	450953	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=exon:NA12877_ch_T0000053:2;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	450745	450953	.	+	2	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=CDS:NA12877_ch_T0000053:1;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	450954	456762	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=intron:NA12877_ch_T0000053:2;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	456763	456820	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=exon:NA12877_ch_T0000053:3;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	456763	456820	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=CDS:NA12877_ch_T0000053:2;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	456821	456940	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=intron:NA12877_ch_T0000053:3;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	456941	457029	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=exon:NA12877_ch_T0000053:4;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	456941	457029	.	+	2	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=CDS:NA12877_ch_T0000053:3;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	457030	460331	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=intron:NA12877_ch_T0000053:4;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	460332	462762	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=exon:NA12877_ch_T0000053:5;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	460332	460577	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=CDS:NA12877_ch_T0000053:4;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	460575	460577	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=NA12877_ch_T0000053;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000053;transcript_name=NA12877_ch_T0000053;gene_name=SHOX;ID=stop_codon:NA12877_ch_T0000053;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	446918	466876	100	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_G0000013;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=NA12877_ch_T0000054;Name=SHOX
NA12877_chrY	CAT	exon	446918	447301	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=exon:NA12877_ch_T0000054:0;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	447025	447301	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=CDS:NA12877_ch_T0000054:0;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	447025	447027	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=start_codon:NA12877_ch_T0000054;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	447302	450744	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=intron:NA12877_ch_T0000054:0;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	450745	450953	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=exon:NA12877_ch_T0000054:1;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	450745	450953	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=CDS:NA12877_ch_T0000054:1;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	450954	456762	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=intron:NA12877_ch_T0000054:1;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	456763	456820	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=exon:NA12877_ch_T0000054:2;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	456763	456820	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=CDS:NA12877_ch_T0000054:2;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	456821	456940	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=intron:NA12877_ch_T0000054:2;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	456941	457029	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=exon:NA12877_ch_T0000054:3;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	456941	457029	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=CDS:NA12877_ch_T0000054:3;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	457030	460331	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=intron:NA12877_ch_T0000054:3;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	460332	466876	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=exon:NA12877_ch_T0000054:4;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	460332	460577	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=CDS:NA12877_ch_T0000054:4;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	460575	460577	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=NA12877_ch_T0000054;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000054;transcript_name=NA12877_ch_T0000054;gene_name=SHOX;ID=stop_codon:NA12877_ch_T0000054;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	446934	474685	100	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_G0000013;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=NA12877_ch_T0000055;Name=SHOX
NA12877_chrY	CAT	exon	446934	447301	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=exon:NA12877_ch_T0000055:0;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	447025	447301	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=CDS:NA12877_ch_T0000055:0;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	447025	447027	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=start_codon:NA12877_ch_T0000055;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	447302	450744	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=intron:NA12877_ch_T0000055:0;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	450745	450953	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=exon:NA12877_ch_T0000055:1;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	450745	450953	.	+	2	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=CDS:NA12877_ch_T0000055:1;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	450954	456762	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=intron:NA12877_ch_T0000055:1;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	456763	456820	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=exon:NA12877_ch_T0000055:2;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	456763	456820	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=CDS:NA12877_ch_T0000055:2;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	456821	456940	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=intron:NA12877_ch_T0000055:2;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	456941	457029	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=exon:NA12877_ch_T0000055:3;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	456941	457029	.	+	2	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=CDS:NA12877_ch_T0000055:3;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	457030	474058	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=intron:NA12877_ch_T0000055:3;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	474059	474685	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=exon:NA12877_ch_T0000055:4;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	474059	474103	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=CDS:NA12877_ch_T0000055:4;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	474101	474103	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=NA12877_ch_T0000055;gene_id=NA12877_ch_G0000013;Parent=NA12877_ch_T0000055;transcript_name=NA12877_ch_T0000055;gene_name=SHOX;ID=stop_codon:NA12877_ch_T0000055;Name=SHOX;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	781361	782304	.	-	.	source_gene_common_name=ENSG00000310541;source_gene=ENSG00000310541.1;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;gene_id=NA12877_ch_G0000014;gene_biotype=lncRNA;gene_name=ENSG00000310541;gene_sources=liftoff;ID=NA12877_ch_G0000014;Name=ENSG00000310541
NA12877_chrY	CAT	transcript	781361	782304	1000	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=299.765;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=NA12877_ch_T0000056;gene_id=NA12877_ch_G0000014;Parent=NA12877_ch_G0000014;transcript_name=NA12877_ch_T0000056;gene_name=ENSG00000310541;ID=NA12877_ch_T0000056;Name=ENSG00000310541
NA12877_chrY	CAT	exon	781361	781689	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=299.765;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=NA12877_ch_T0000056;gene_id=NA12877_ch_G0000014;Parent=NA12877_ch_T0000056;transcript_name=NA12877_ch_T0000056;gene_name=ENSG00000310541;ID=exon:NA12877_ch_T0000056:0;Name=ENSG00000310541;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	781690	782207	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=299.765;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=NA12877_ch_T0000056;gene_id=NA12877_ch_G0000014;Parent=NA12877_ch_T0000056;transcript_name=NA12877_ch_T0000056;gene_name=ENSG00000310541;ID=intron:NA12877_ch_T0000056:0;Name=ENSG00000310541;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	782208	782304	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=299.765;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=NA12877_ch_T0000056;gene_id=NA12877_ch_G0000014;Parent=NA12877_ch_T0000056;transcript_name=NA12877_ch_T0000056;gene_name=ENSG00000310541;ID=exon:NA12877_ch_T0000056:1;Name=ENSG00000310541;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	807173	812243	.	+	.	source_gene_common_name=ENSG00000292335;source_gene=ENSG00000292335.2;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;gene_id=NA12877_ch_G0000015;gene_biotype=lncRNA;gene_name=ENSG00000292335;gene_sources=liftoff;ID=NA12877_ch_G0000015;Name=ENSG00000292335
NA12877_chrY	CAT	transcript	807173	812235	1000	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=NA12877_ch_T0000057;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_G0000015;transcript_name=NA12877_ch_T0000057;gene_name=ENSG00000292335;ID=NA12877_ch_T0000057;Name=ENSG00000292335
NA12877_chrY	CAT	exon	807173	807504	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=NA12877_ch_T0000057;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000057;transcript_name=NA12877_ch_T0000057;gene_name=ENSG00000292335;ID=exon:NA12877_ch_T0000057:0;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	807505	811234	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=NA12877_ch_T0000057;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000057;transcript_name=NA12877_ch_T0000057;gene_name=ENSG00000292335;ID=intron:NA12877_ch_T0000057:0;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	811235	811298	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=NA12877_ch_T0000057;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000057;transcript_name=NA12877_ch_T0000057;gene_name=ENSG00000292335;ID=exon:NA12877_ch_T0000057:1;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	811299	811853	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=NA12877_ch_T0000057;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000057;transcript_name=NA12877_ch_T0000057;gene_name=ENSG00000292335;ID=intron:NA12877_ch_T0000057:1;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	811854	812235	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=NA12877_ch_T0000057;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000057;transcript_name=NA12877_ch_T0000057;gene_name=ENSG00000292335;ID=exon:NA12877_ch_T0000057:2;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	807218	812235	1000	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.851;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=NA12877_ch_T0000058;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_G0000015;transcript_name=NA12877_ch_T0000058;gene_name=ENSG00000292335;ID=NA12877_ch_T0000058;Name=ENSG00000292335
NA12877_chrY	CAT	exon	807218	807504	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=NA12877_ch_T0000058;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000058;transcript_name=NA12877_ch_T0000058;gene_name=ENSG00000292335;ID=exon:NA12877_ch_T0000058:0;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	807505	811853	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=NA12877_ch_T0000058;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000058;transcript_name=NA12877_ch_T0000058;gene_name=ENSG00000292335;ID=intron:NA12877_ch_T0000058:0;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	811854	812235	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=NA12877_ch_T0000058;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000058;transcript_name=NA12877_ch_T0000058;gene_name=ENSG00000292335;ID=exon:NA12877_ch_T0000058:1;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	807253	812235	1000	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=NA12877_ch_T0000059;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_G0000015;transcript_name=NA12877_ch_T0000059;gene_name=ENSG00000292335;ID=NA12877_ch_T0000059;Name=ENSG00000292335
NA12877_chrY	CAT	exon	807253	807499	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=NA12877_ch_T0000059;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000059;transcript_name=NA12877_ch_T0000059;gene_name=ENSG00000292335;ID=exon:NA12877_ch_T0000059:0;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	807500	811234	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=NA12877_ch_T0000059;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000059;transcript_name=NA12877_ch_T0000059;gene_name=ENSG00000292335;ID=intron:NA12877_ch_T0000059:0;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	811235	811298	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=NA12877_ch_T0000059;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000059;transcript_name=NA12877_ch_T0000059;gene_name=ENSG00000292335;ID=exon:NA12877_ch_T0000059:1;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	811299	811853	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=NA12877_ch_T0000059;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000059;transcript_name=NA12877_ch_T0000059;gene_name=ENSG00000292335;ID=intron:NA12877_ch_T0000059:1;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	811854	812235	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=NA12877_ch_T0000059;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000059;transcript_name=NA12877_ch_T0000059;gene_name=ENSG00000292335;ID=exon:NA12877_ch_T0000059:2;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	807268	812243	1000	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.839;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=NA12877_ch_T0000060;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_G0000015;transcript_name=NA12877_ch_T0000060;gene_name=ENSG00000292335;ID=NA12877_ch_T0000060;Name=ENSG00000292335
NA12877_chrY	CAT	exon	807268	807499	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=NA12877_ch_T0000060;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000060;transcript_name=NA12877_ch_T0000060;gene_name=ENSG00000292335;ID=exon:NA12877_ch_T0000060:0;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	807500	811853	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=NA12877_ch_T0000060;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000060;transcript_name=NA12877_ch_T0000060;gene_name=ENSG00000292335;ID=intron:NA12877_ch_T0000060:0;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	811854	812243	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=NA12877_ch_T0000060;gene_id=NA12877_ch_G0000015;Parent=NA12877_ch_T0000060;transcript_name=NA12877_ch_T0000060;gene_name=ENSG00000292335;ID=exon:NA12877_ch_T0000060:1;Name=ENSG00000292335;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	826377	827975	.	-	.	source_gene_common_name=RPL14P5;source_gene=ENSG00000292328.1;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;gene_id=NA12877_ch_G0000016;gene_biotype=processed_pseudogene;gene_name=RPL14P5;gene_sources=liftoff;ID=NA12877_ch_G0000016;Name=RPL14P5
NA12877_chrY	CAT	transcript	826377	827975	1000	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=NA12877_ch_T0000061;gene_id=NA12877_ch_G0000016;Parent=NA12877_ch_G0000016;transcript_name=NA12877_ch_T0000061;gene_name=RPL14P5;ID=NA12877_ch_T0000061;Name=RPL14P5
NA12877_chrY	CAT	exon	826377	826425	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=NA12877_ch_T0000061;gene_id=NA12877_ch_G0000016;Parent=NA12877_ch_T0000061;transcript_name=NA12877_ch_T0000061;gene_name=RPL14P5;ID=exon:NA12877_ch_T0000061:0;Name=RPL14P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	826426	826965	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=NA12877_ch_T0000061;gene_id=NA12877_ch_G0000016;Parent=NA12877_ch_T0000061;transcript_name=NA12877_ch_T0000061;gene_name=RPL14P5;ID=intron:NA12877_ch_T0000061:0;Name=RPL14P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	826966	827254	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=NA12877_ch_T0000061;gene_id=NA12877_ch_G0000016;Parent=NA12877_ch_T0000061;transcript_name=NA12877_ch_T0000061;gene_name=RPL14P5;ID=exon:NA12877_ch_T0000061:1;Name=RPL14P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	827255	827583	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=NA12877_ch_T0000061;gene_id=NA12877_ch_G0000016;Parent=NA12877_ch_T0000061;transcript_name=NA12877_ch_T0000061;gene_name=RPL14P5;ID=intron:NA12877_ch_T0000061:1;Name=RPL14P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	827584	827975	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=NA12877_ch_T0000061;gene_id=NA12877_ch_G0000016;Parent=NA12877_ch_T0000061;transcript_name=NA12877_ch_T0000061;gene_name=RPL14P5;ID=exon:NA12877_ch_T0000061:2;Name=RPL14P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	938543	939522	.	+	.	source_gene_common_name=ENSG00000310548;source_gene=ENSG00000310548.1;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;gene_id=NA12877_ch_G0000017;gene_biotype=lncRNA;gene_name=ENSG00000310548;gene_sources=liftoff;ID=NA12877_ch_G0000017;Name=ENSG00000310548
NA12877_chrY	CAT	transcript	938543	939522	1000	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.882;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=NA12877_ch_T0000062;gene_id=NA12877_ch_G0000017;Parent=NA12877_ch_G0000017;transcript_name=NA12877_ch_T0000062;gene_name=ENSG00000310548;ID=NA12877_ch_T0000062;Name=ENSG00000310548
NA12877_chrY	CAT	exon	938543	938668	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=NA12877_ch_T0000062;gene_id=NA12877_ch_G0000017;Parent=NA12877_ch_T0000062;transcript_name=NA12877_ch_T0000062;gene_name=ENSG00000310548;ID=exon:NA12877_ch_T0000062:0;Name=ENSG00000310548;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	938669	938802	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=NA12877_ch_T0000062;gene_id=NA12877_ch_G0000017;Parent=NA12877_ch_T0000062;transcript_name=NA12877_ch_T0000062;gene_name=ENSG00000310548;ID=intron:NA12877_ch_T0000062:0;Name=ENSG00000310548;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	938803	939522	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=NA12877_ch_T0000062;gene_id=NA12877_ch_G0000017;Parent=NA12877_ch_T0000062;transcript_name=NA12877_ch_T0000062;gene_name=ENSG00000310548;ID=exon:NA12877_ch_T0000062:1;Name=ENSG00000310548;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1090840	1107252	.	+	.	source_gene_common_name=IL3RA;source_gene=ENSG00000292332.1;alternative_source_transcripts=ENST00000711219.1;gene_id=NA12877_ch_G0000018;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff;ID=NA12877_ch_G0000018;Name=IL3RA
NA12877_chrY	CAT	transcript	1090840	1107252	100	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_G0000018;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=NA12877_ch_T0000063;Name=IL3RA
NA12877_chrY	CAT	exon	1090840	1090954	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_T0000063;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=exon:NA12877_ch_T0000063:0;Name=IL3RA;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1090840	1090954	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_T0000063;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=CDS:NA12877_ch_T0000063:0;Name=IL3RA;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1090955	1103220	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_T0000063;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=intron:NA12877_ch_T0000063:0;Name=IL3RA;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1103221	1103326	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_T0000063;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=exon:NA12877_ch_T0000063:1;Name=IL3RA;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1103221	1103326	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_T0000063;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=CDS:NA12877_ch_T0000063:1;Name=IL3RA;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1103327	1105584	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_T0000063;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=intron:NA12877_ch_T0000063:1;Name=IL3RA;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1105585	1105666	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_T0000063;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=exon:NA12877_ch_T0000063:2;Name=IL3RA;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1105585	1105666	.	+	1	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_T0000063;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=CDS:NA12877_ch_T0000063:2;Name=IL3RA;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1105667	1106952	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_T0000063;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=intron:NA12877_ch_T0000063:2;Name=IL3RA;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1106953	1107252	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_T0000063;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=exon:NA12877_ch_T0000063:3;Name=IL3RA;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1106953	1107027	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_T0000063;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=CDS:NA12877_ch_T0000063:3;Name=IL3RA;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1107025	1107027	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1;transcript_id=NA12877_ch_T0000063;gene_id=NA12877_ch_G0000018;Parent=NA12877_ch_T0000063;transcript_name=NA12877_ch_T0000063;gene_name=IL3RA;ID=stop_codon:NA12877_ch_T0000063;Name=IL3RA;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1110715	1116676	.	-	.	source_gene_common_name=SLC25A6;source_gene=ENSG00000292334.1;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;gene_id=NA12877_ch_G0000019;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff;ID=NA12877_ch_G0000019;Name=SLC25A6
NA12877_chrY	CAT	transcript	1110715	1116676	100	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_G0000019;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=NA12877_ch_T0000064;Name=SLC25A6
NA12877_chrY	CAT	exon	1110715	1111322	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=exon:NA12877_ch_T0000064:0;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1111165	1111322	.	-	2	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=CDS:NA12877_ch_T0000064:0;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1111165	1111167	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=stop_codon:NA12877_ch_T0000064;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1111323	1111841	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=intron:NA12877_ch_T0000064:0;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1111842	1111982	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=exon:NA12877_ch_T0000064:1;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1111842	1111982	.	-	2	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=CDS:NA12877_ch_T0000064:1;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1111983	1113803	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=intron:NA12877_ch_T0000064:1;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1113804	1114290	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=exon:NA12877_ch_T0000064:2;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1113804	1114290	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=CDS:NA12877_ch_T0000064:2;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1114291	1116461	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=intron:NA12877_ch_T0000064:2;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1116462	1116676	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=exon:NA12877_ch_T0000064:3;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1116462	1116572	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=CDS:NA12877_ch_T0000064:3;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1116570	1116572	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=NA12877_ch_T0000064;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000064;transcript_name=NA12877_ch_T0000064;gene_name=SLC25A6;ID=start_codon:NA12877_ch_T0000064;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1111874	1116666	1000	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=NA12877_ch_T0000065;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_G0000019;transcript_name=NA12877_ch_T0000065;gene_name=SLC25A6;ID=NA12877_ch_T0000065;Name=SLC25A6
NA12877_chrY	CAT	exon	1111874	1111982	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=NA12877_ch_T0000065;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000065;transcript_name=NA12877_ch_T0000065;gene_name=SLC25A6;ID=exon:NA12877_ch_T0000065:0;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1111983	1113803	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=NA12877_ch_T0000065;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000065;transcript_name=NA12877_ch_T0000065;gene_name=SLC25A6;ID=intron:NA12877_ch_T0000065:0;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1113804	1114290	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=NA12877_ch_T0000065;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000065;transcript_name=NA12877_ch_T0000065;gene_name=SLC25A6;ID=exon:NA12877_ch_T0000065:1;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1114291	1114754	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=NA12877_ch_T0000065;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000065;transcript_name=NA12877_ch_T0000065;gene_name=SLC25A6;ID=intron:NA12877_ch_T0000065:1;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1114755	1114853	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=NA12877_ch_T0000065;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000065;transcript_name=NA12877_ch_T0000065;gene_name=SLC25A6;ID=exon:NA12877_ch_T0000065:2;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1114854	1116461	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=NA12877_ch_T0000065;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000065;transcript_name=NA12877_ch_T0000065;gene_name=SLC25A6;ID=intron:NA12877_ch_T0000065:2;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1116462	1116666	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=NA12877_ch_T0000065;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000065;transcript_name=NA12877_ch_T0000065;gene_name=SLC25A6;ID=exon:NA12877_ch_T0000065:3;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1111908	1116651	1000	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=NA12877_ch_T0000066;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_G0000019;transcript_name=NA12877_ch_T0000066;gene_name=SLC25A6;ID=NA12877_ch_T0000066;Name=SLC25A6
NA12877_chrY	CAT	exon	1111908	1111982	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=NA12877_ch_T0000066;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000066;transcript_name=NA12877_ch_T0000066;gene_name=SLC25A6;ID=exon:NA12877_ch_T0000066:0;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1111983	1113803	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=NA12877_ch_T0000066;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000066;transcript_name=NA12877_ch_T0000066;gene_name=SLC25A6;ID=intron:NA12877_ch_T0000066:0;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1113804	1114290	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=NA12877_ch_T0000066;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000066;transcript_name=NA12877_ch_T0000066;gene_name=SLC25A6;ID=exon:NA12877_ch_T0000066:1;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1114291	1114754	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=NA12877_ch_T0000066;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000066;transcript_name=NA12877_ch_T0000066;gene_name=SLC25A6;ID=intron:NA12877_ch_T0000066:1;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1114755	1114856	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=NA12877_ch_T0000066;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000066;transcript_name=NA12877_ch_T0000066;gene_name=SLC25A6;ID=exon:NA12877_ch_T0000066:2;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1114857	1116461	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=NA12877_ch_T0000066;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000066;transcript_name=NA12877_ch_T0000066;gene_name=SLC25A6;ID=intron:NA12877_ch_T0000066:2;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1116462	1116651	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=NA12877_ch_T0000066;gene_id=NA12877_ch_G0000019;Parent=NA12877_ch_T0000066;transcript_name=NA12877_ch_T0000066;gene_name=SLC25A6;ID=exon:NA12877_ch_T0000066:3;Name=SLC25A6;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1117242	1125088	.	+	.	source_gene_common_name=LINC00106;source_gene=ENSG00000292341.2;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;gene_id=NA12877_ch_G0000020;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=NA12877_ch_G0000020;Name=LINC00106
NA12877_chrY	CAT	transcript	1117242	1125088	1000	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=NA12877_ch_T0000067;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_G0000020;transcript_name=NA12877_ch_T0000067;gene_name=LINC00106;ID=NA12877_ch_T0000067;Name=LINC00106
NA12877_chrY	CAT	exon	1117242	1117326	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=NA12877_ch_T0000067;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000067;transcript_name=NA12877_ch_T0000067;gene_name=LINC00106;ID=exon:NA12877_ch_T0000067:0;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1117327	1120937	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=NA12877_ch_T0000067;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000067;transcript_name=NA12877_ch_T0000067;gene_name=LINC00106;ID=intron:NA12877_ch_T0000067:0;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1120938	1121214	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=NA12877_ch_T0000067;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000067;transcript_name=NA12877_ch_T0000067;gene_name=LINC00106;ID=exon:NA12877_ch_T0000067:1;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1121215	1123390	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=NA12877_ch_T0000067;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000067;transcript_name=NA12877_ch_T0000067;gene_name=LINC00106;ID=intron:NA12877_ch_T0000067:1;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1123391	1123524	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=NA12877_ch_T0000067;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000067;transcript_name=NA12877_ch_T0000067;gene_name=LINC00106;ID=exon:NA12877_ch_T0000067:2;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1123525	1124726	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=NA12877_ch_T0000067;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000067;transcript_name=NA12877_ch_T0000067;gene_name=LINC00106;ID=intron:NA12877_ch_T0000067:2;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1124727	1125088	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=299.418;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=NA12877_ch_T0000067;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000067;transcript_name=NA12877_ch_T0000067;gene_name=LINC00106;ID=exon:NA12877_ch_T0000067:3;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1117292	1123978	1000	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=NA12877_ch_T0000068;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_G0000020;transcript_name=NA12877_ch_T0000068;gene_name=LINC00106;ID=NA12877_ch_T0000068;Name=LINC00106
NA12877_chrY	CAT	exon	1117292	1117326	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=NA12877_ch_T0000068;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000068;transcript_name=NA12877_ch_T0000068;gene_name=LINC00106;ID=exon:NA12877_ch_T0000068:0;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1117327	1120937	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=NA12877_ch_T0000068;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000068;transcript_name=NA12877_ch_T0000068;gene_name=LINC00106;ID=intron:NA12877_ch_T0000068:0;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1120938	1121214	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=NA12877_ch_T0000068;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000068;transcript_name=NA12877_ch_T0000068;gene_name=LINC00106;ID=exon:NA12877_ch_T0000068:1;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1121215	1123390	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=NA12877_ch_T0000068;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000068;transcript_name=NA12877_ch_T0000068;gene_name=LINC00106;ID=intron:NA12877_ch_T0000068:1;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1123391	1123524	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=NA12877_ch_T0000068;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000068;transcript_name=NA12877_ch_T0000068;gene_name=LINC00106;ID=exon:NA12877_ch_T0000068:2;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1123525	1123932	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=NA12877_ch_T0000068;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000068;transcript_name=NA12877_ch_T0000068;gene_name=LINC00106;ID=intron:NA12877_ch_T0000068:2;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1123933	1123978	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=NA12877_ch_T0000068;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000068;transcript_name=NA12877_ch_T0000068;gene_name=LINC00106;ID=exon:NA12877_ch_T0000068:3;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1120938	1125088	1000	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=299.352;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=NA12877_ch_T0000069;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_G0000020;transcript_name=NA12877_ch_T0000069;gene_name=LINC00106;ID=NA12877_ch_T0000069;Name=LINC00106
NA12877_chrY	CAT	exon	1120938	1121214	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=299.352;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=NA12877_ch_T0000069;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000069;transcript_name=NA12877_ch_T0000069;gene_name=LINC00106;ID=exon:NA12877_ch_T0000069:0;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1121215	1123390	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=299.352;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=NA12877_ch_T0000069;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000069;transcript_name=NA12877_ch_T0000069;gene_name=LINC00106;ID=intron:NA12877_ch_T0000069:0;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1123391	1123524	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=299.352;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=NA12877_ch_T0000069;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000069;transcript_name=NA12877_ch_T0000069;gene_name=LINC00106;ID=exon:NA12877_ch_T0000069:1;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1123525	1124729	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=299.352;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=NA12877_ch_T0000069;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000069;transcript_name=NA12877_ch_T0000069;gene_name=LINC00106;ID=intron:NA12877_ch_T0000069:1;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1124730	1125088	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=299.352;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=NA12877_ch_T0000069;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000069;transcript_name=NA12877_ch_T0000069;gene_name=LINC00106;ID=exon:NA12877_ch_T0000069:2;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1121591	1123968	1000	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=299.73;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=NA12877_ch_T0000070;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_G0000020;transcript_name=NA12877_ch_T0000070;gene_name=LINC00106;ID=NA12877_ch_T0000070;Name=LINC00106
NA12877_chrY	CAT	exon	1121591	1121790	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=NA12877_ch_T0000070;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000070;transcript_name=NA12877_ch_T0000070;gene_name=LINC00106;ID=exon:NA12877_ch_T0000070:0;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1121791	1123390	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=NA12877_ch_T0000070;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000070;transcript_name=NA12877_ch_T0000070;gene_name=LINC00106;ID=intron:NA12877_ch_T0000070:0;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1123391	1123524	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=NA12877_ch_T0000070;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000070;transcript_name=NA12877_ch_T0000070;gene_name=LINC00106;ID=exon:NA12877_ch_T0000070:1;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1123525	1123932	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=NA12877_ch_T0000070;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000070;transcript_name=NA12877_ch_T0000070;gene_name=LINC00106;ID=intron:NA12877_ch_T0000070:1;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1123933	1123968	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=NA12877_ch_T0000070;gene_id=NA12877_ch_G0000020;Parent=NA12877_ch_T0000070;transcript_name=NA12877_ch_T0000070;gene_name=LINC00106;ID=exon:NA12877_ch_T0000070:2;Name=LINC00106;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1125994	1136749	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=ENSG00000292331.2;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;gene_id=NA12877_ch_G0000021;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=NA12877_ch_G0000021;Name=ASMTL-AS1
NA12877_chrY	CAT	transcript	1125994	1136749	1000	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.669;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=NA12877_ch_T0000071;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_G0000021;transcript_name=NA12877_ch_T0000071;gene_name=ASMTL-AS1;ID=NA12877_ch_T0000071;Name=ASMTL-AS1
NA12877_chrY	CAT	exon	1125994	1126150	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.669;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=NA12877_ch_T0000071;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000071;transcript_name=NA12877_ch_T0000071;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000071:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1126151	1126587	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.669;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=NA12877_ch_T0000071;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000071;transcript_name=NA12877_ch_T0000071;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000071:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1126588	1126789	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.669;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=NA12877_ch_T0000071;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000071;transcript_name=NA12877_ch_T0000071;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000071:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1126790	1127946	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.669;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=NA12877_ch_T0000071;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000071;transcript_name=NA12877_ch_T0000071;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000071:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1127947	1128071	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.669;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=NA12877_ch_T0000071;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000071;transcript_name=NA12877_ch_T0000071;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000071:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1128072	1135464	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.669;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=NA12877_ch_T0000071;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000071;transcript_name=NA12877_ch_T0000071;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000071:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135465	1135610	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.669;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=NA12877_ch_T0000071;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000071;transcript_name=NA12877_ch_T0000071;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000071:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1135611	1136473	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.669;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=NA12877_ch_T0000071;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000071;transcript_name=NA12877_ch_T0000071;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000071:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1136474	1136749	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.669;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=NA12877_ch_T0000071;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000071;transcript_name=NA12877_ch_T0000071;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000071:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1126029	1136311	1000	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.478;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=NA12877_ch_T0000072;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_G0000021;transcript_name=NA12877_ch_T0000072;gene_name=ASMTL-AS1;ID=NA12877_ch_T0000072;Name=ASMTL-AS1
NA12877_chrY	CAT	exon	1126029	1126150	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=NA12877_ch_T0000072;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000072;transcript_name=NA12877_ch_T0000072;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000072:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1126151	1126587	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=NA12877_ch_T0000072;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000072;transcript_name=NA12877_ch_T0000072;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000072:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1126588	1126789	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=NA12877_ch_T0000072;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000072;transcript_name=NA12877_ch_T0000072;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000072:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1126790	1127946	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=NA12877_ch_T0000072;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000072;transcript_name=NA12877_ch_T0000072;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000072:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1127947	1128071	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=NA12877_ch_T0000072;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000072;transcript_name=NA12877_ch_T0000072;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000072:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1128072	1135464	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=NA12877_ch_T0000072;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000072;transcript_name=NA12877_ch_T0000072;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000072:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135465	1135610	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=NA12877_ch_T0000072;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000072;transcript_name=NA12877_ch_T0000072;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000072:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1135611	1135945	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=NA12877_ch_T0000072;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000072;transcript_name=NA12877_ch_T0000072;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000072:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135946	1136311	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=NA12877_ch_T0000072;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000072;transcript_name=NA12877_ch_T0000072;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000072:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1126029	1135877	1000	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.42;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=NA12877_ch_T0000073;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_G0000021;transcript_name=NA12877_ch_T0000073;gene_name=ASMTL-AS1;ID=NA12877_ch_T0000073;Name=ASMTL-AS1
NA12877_chrY	CAT	exon	1126029	1126150	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.42;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=NA12877_ch_T0000073;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000073;transcript_name=NA12877_ch_T0000073;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000073:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1126151	1126587	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.42;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=NA12877_ch_T0000073;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000073;transcript_name=NA12877_ch_T0000073;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000073:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1126588	1126789	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.42;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=NA12877_ch_T0000073;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000073;transcript_name=NA12877_ch_T0000073;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000073:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1126790	1127946	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.42;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=NA12877_ch_T0000073;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000073;transcript_name=NA12877_ch_T0000073;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000073:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1127947	1128071	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.42;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=NA12877_ch_T0000073;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000073;transcript_name=NA12877_ch_T0000073;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000073:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1128072	1135464	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.42;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=NA12877_ch_T0000073;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000073;transcript_name=NA12877_ch_T0000073;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000073:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135465	1135877	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.42;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=NA12877_ch_T0000073;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000073;transcript_name=NA12877_ch_T0000073;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000073:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1126039	1136749	1000	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.646;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=NA12877_ch_T0000074;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_G0000021;transcript_name=NA12877_ch_T0000074;gene_name=ASMTL-AS1;ID=NA12877_ch_T0000074;Name=ASMTL-AS1
NA12877_chrY	CAT	exon	1126039	1126150	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.646;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=NA12877_ch_T0000074;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000074;transcript_name=NA12877_ch_T0000074;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000074:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1126151	1126587	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.646;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=NA12877_ch_T0000074;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000074;transcript_name=NA12877_ch_T0000074;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000074:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1126588	1126789	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.646;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=NA12877_ch_T0000074;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000074;transcript_name=NA12877_ch_T0000074;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000074:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1126790	1127946	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.646;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=NA12877_ch_T0000074;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000074;transcript_name=NA12877_ch_T0000074;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000074:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1127947	1128071	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.646;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=NA12877_ch_T0000074;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000074;transcript_name=NA12877_ch_T0000074;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000074:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1128072	1135464	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.646;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=NA12877_ch_T0000074;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000074;transcript_name=NA12877_ch_T0000074;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000074:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135465	1135610	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.646;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=NA12877_ch_T0000074;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000074;transcript_name=NA12877_ch_T0000074;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000074:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1135611	1136486	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.646;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=NA12877_ch_T0000074;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000074;transcript_name=NA12877_ch_T0000074;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000074:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1136487	1136749	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.646;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=NA12877_ch_T0000074;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000074;transcript_name=NA12877_ch_T0000074;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000074:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1126333	1127979	1000	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=299.826;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=NA12877_ch_T0000075;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_G0000021;transcript_name=NA12877_ch_T0000075;gene_name=ASMTL-AS1;ID=NA12877_ch_T0000075;Name=ASMTL-AS1
NA12877_chrY	CAT	exon	1126333	1126789	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=NA12877_ch_T0000075;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000075;transcript_name=NA12877_ch_T0000075;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000075:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1126790	1127862	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=NA12877_ch_T0000075;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000075;transcript_name=NA12877_ch_T0000075;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000075:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1127863	1127979	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=NA12877_ch_T0000075;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000075;transcript_name=NA12877_ch_T0000075;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000075:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1126375	1136640	1000	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.64300000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=NA12877_ch_T0000076;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_G0000021;transcript_name=NA12877_ch_T0000076;gene_name=ASMTL-AS1;ID=NA12877_ch_T0000076;Name=ASMTL-AS1
NA12877_chrY	CAT	exon	1126375	1126789	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.64300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=NA12877_ch_T0000076;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000076;transcript_name=NA12877_ch_T0000076;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000076:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1126790	1127946	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.64300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=NA12877_ch_T0000076;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000076;transcript_name=NA12877_ch_T0000076;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000076:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1127947	1128071	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.64300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=NA12877_ch_T0000076;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000076;transcript_name=NA12877_ch_T0000076;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000076:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1128072	1135464	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.64300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=NA12877_ch_T0000076;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000076;transcript_name=NA12877_ch_T0000076;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000076:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135465	1135610	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.64300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=NA12877_ch_T0000076;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000076;transcript_name=NA12877_ch_T0000076;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000076:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1135611	1136486	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.64300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=NA12877_ch_T0000076;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000076;transcript_name=NA12877_ch_T0000076;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000076:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1136487	1136640	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.64300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=NA12877_ch_T0000076;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000076;transcript_name=NA12877_ch_T0000076;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000076:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1126540	1136311	1000	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.426;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=NA12877_ch_T0000077;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_G0000021;transcript_name=NA12877_ch_T0000077;gene_name=ASMTL-AS1;ID=NA12877_ch_T0000077;Name=ASMTL-AS1
NA12877_chrY	CAT	exon	1126540	1126789	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=NA12877_ch_T0000077;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000077;transcript_name=NA12877_ch_T0000077;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000077:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1126790	1127946	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=NA12877_ch_T0000077;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000077;transcript_name=NA12877_ch_T0000077;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000077:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1127947	1128071	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=NA12877_ch_T0000077;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000077;transcript_name=NA12877_ch_T0000077;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000077:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1128072	1135464	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=NA12877_ch_T0000077;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000077;transcript_name=NA12877_ch_T0000077;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000077:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135465	1136311	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.426;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=NA12877_ch_T0000077;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000077;transcript_name=NA12877_ch_T0000077;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000077:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1127667	1136311	1000	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=299.52;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=NA12877_ch_T0000083;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_G0000021;transcript_name=NA12877_ch_T0000083;gene_name=ASMTL-AS1;ID=NA12877_ch_T0000083;Name=ASMTL-AS1
NA12877_chrY	CAT	exon	1127667	1128071	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=299.52;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=NA12877_ch_T0000083;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000083;transcript_name=NA12877_ch_T0000083;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000083:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1128072	1135464	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=299.52;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=NA12877_ch_T0000083;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000083;transcript_name=NA12877_ch_T0000083;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000083:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135465	1136311	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=299.52;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=NA12877_ch_T0000083;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000083;transcript_name=NA12877_ch_T0000083;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000083:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1127945	1136753	1000	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=299.63800000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=NA12877_ch_T0000084;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_G0000021;transcript_name=NA12877_ch_T0000084;gene_name=ASMTL-AS1;ID=NA12877_ch_T0000084;Name=ASMTL-AS1
NA12877_chrY	CAT	exon	1127945	1128071	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=299.63800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=NA12877_ch_T0000084;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000084;transcript_name=NA12877_ch_T0000084;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000084:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1128072	1135464	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=299.63800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=NA12877_ch_T0000084;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000084;transcript_name=NA12877_ch_T0000084;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000084:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135465	1135610	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=299.63800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=NA12877_ch_T0000084;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000084;transcript_name=NA12877_ch_T0000084;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000084:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1135611	1136473	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=299.63800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=NA12877_ch_T0000084;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000084;transcript_name=NA12877_ch_T0000084;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000084:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1136474	1136753	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=299.63800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=NA12877_ch_T0000084;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000084;transcript_name=NA12877_ch_T0000084;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000084:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1127996	1136749	1000	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=299.53999999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=NA12877_ch_T0000085;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_G0000021;transcript_name=NA12877_ch_T0000085;gene_name=ASMTL-AS1;ID=NA12877_ch_T0000085;Name=ASMTL-AS1
NA12877_chrY	CAT	exon	1127996	1128071	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=299.53999999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=NA12877_ch_T0000085;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000085;transcript_name=NA12877_ch_T0000085;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000085:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1128072	1135512	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=299.53999999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=NA12877_ch_T0000085;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000085;transcript_name=NA12877_ch_T0000085;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000085:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135513	1135610	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=299.53999999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=NA12877_ch_T0000085;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000085;transcript_name=NA12877_ch_T0000085;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000085:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1135611	1136488	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=299.53999999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=NA12877_ch_T0000085;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000085;transcript_name=NA12877_ch_T0000085;gene_name=ASMTL-AS1;ID=intron:NA12877_ch_T0000085:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1136489	1136749	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=299.53999999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=NA12877_ch_T0000085;gene_id=NA12877_ch_G0000021;Parent=NA12877_ch_T0000085;transcript_name=NA12877_ch_T0000085;gene_name=ASMTL-AS1;ID=exon:NA12877_ch_T0000085:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1127625	1177197	.	-	.	source_gene_common_name=ASMTL;source_gene=ENSG00000292339.1;gene_id=NA12877_ch_G0000022;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,transMap,transMap_pairwise;ID=NA12877_ch_G0000022;Name=ASMTL
NA12877_chrY	CAT	transcript	1127625	1177121	9980	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_G0000022;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=NA12877_ch_T0000078;Name=ASMTL
NA12877_chrY	CAT	exon	1127625	1127975	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1127755	1127975	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000078:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1127755	1127757	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=stop_codon:NA12877_ch_T0000078;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1127976	1135453	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135454	1135576	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1135454	1135576	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000078:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1135577	1140686	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1140687	1140830	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1140687	1140830	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000078:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1140831	1141695	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1141696	1141828	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1141696	1141828	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000078:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1141829	1144371	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1144372	1144556	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1144372	1144556	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000078:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1144557	1148191	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1148192	1148354	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1148192	1148354	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000078:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1148355	1150404	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1150405	1150792	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1150405	1150792	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000078:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1150793	1154962	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1154963	1155071	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1154963	1155071	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000078:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1155072	1157985	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1157986	1158047	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1157986	1158047	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000078:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1158048	1158657	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1158658	1158722	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1158658	1158722	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000078:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1158723	1162060	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1162061	1162108	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1162061	1162108	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000078:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1162109	1165149	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1165150	1165281	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1165150	1165200	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000078:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1165198	1165200	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=start_codon:NA12877_ch_T0000078;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1165282	1176748	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1176749	1176885	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:12;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1176886	1177113	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=intron:NA12877_ch_T0000078:12;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1177114	1177121	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000078;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000078;transcript_name=NA12877_ch_T0000078;gene_name=ASMTL;ID=exon:NA12877_ch_T0000078:13;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1127625	1176040	100	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_G0000022;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=NA12877_ch_T0000079;Name=ASMTL
NA12877_chrY	CAT	exon	1127625	1127975	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1127755	1127975	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1127755	1127757	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=stop_codon:NA12877_ch_T0000079;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1127976	1135453	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=intron:NA12877_ch_T0000079:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135454	1135576	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1135454	1135576	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1135577	1140686	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=intron:NA12877_ch_T0000079:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1140687	1140830	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1140687	1140830	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1140831	1141695	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=intron:NA12877_ch_T0000079:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1141696	1141828	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1141696	1141828	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1141829	1144371	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=intron:NA12877_ch_T0000079:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1144372	1144556	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1144372	1144556	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1144557	1148191	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=intron:NA12877_ch_T0000079:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1148192	1148354	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1148192	1148354	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1148355	1150404	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=intron:NA12877_ch_T0000079:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1150405	1150792	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1150405	1150792	.	-	1	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1150793	1154962	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=intron:NA12877_ch_T0000079:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1154963	1155071	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1154963	1155071	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1155072	1157985	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=intron:NA12877_ch_T0000079:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1157986	1158047	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1157986	1158047	.	-	1	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1158048	1158657	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=intron:NA12877_ch_T0000079:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1158658	1158722	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1158658	1158722	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1158723	1162060	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=intron:NA12877_ch_T0000079:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1162061	1162108	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1162061	1162108	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1162109	1165149	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=intron:NA12877_ch_T0000079:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1165150	1165281	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1165150	1165281	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1165282	1175878	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=intron:NA12877_ch_T0000079:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1175879	1176040	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=exon:NA12877_ch_T0000079:12;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1175879	1175971	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000079:12;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1175969	1175971	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=NA12877_ch_T0000079;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000079;transcript_name=NA12877_ch_T0000079;gene_name=ASMTL;ID=start_codon:NA12877_ch_T0000079;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1127625	1177197	9980	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_G0000022;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=NA12877_ch_T0000080;Name=ASMTL
NA12877_chrY	CAT	exon	1127625	1127975	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1127755	1127975	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000080:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1127755	1127757	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=stop_codon:NA12877_ch_T0000080;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1127976	1135453	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135454	1135576	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1135454	1135576	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000080:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1135577	1140686	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1140687	1140830	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1140687	1140830	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000080:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1140831	1141695	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1141696	1141828	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1141696	1141828	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000080:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1141829	1144371	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1144372	1144556	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1144372	1144556	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000080:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1144557	1148191	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1148192	1148354	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1148192	1148354	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000080:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1148355	1150404	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1150405	1150792	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1150405	1150792	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000080:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1150793	1154962	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1154963	1155071	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1154963	1155071	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000080:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1155072	1157985	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1157986	1158047	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1157986	1158047	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000080:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1158048	1158657	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1158658	1158722	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1158658	1158722	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000080:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1158723	1162060	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1162061	1162108	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1162061	1162108	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000080:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1162109	1165149	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1165150	1165281	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1165150	1165200	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000080:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1165198	1165200	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=start_codon:NA12877_ch_T0000080;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1165282	1176748	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1176749	1176869	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:12;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1176870	1177173	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=intron:NA12877_ch_T0000080:12;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1177174	1177197	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000080;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000080;transcript_name=NA12877_ch_T0000080;gene_name=ASMTL;ID=exon:NA12877_ch_T0000080:13;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1127625	1176893	100	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_G0000022;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=NA12877_ch_T0000081;Name=ASMTL
NA12877_chrY	CAT	exon	1127625	1127975	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1127755	1127975	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000081:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1127755	1127757	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=stop_codon:NA12877_ch_T0000081;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1127976	1135453	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=intron:NA12877_ch_T0000081:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135454	1135576	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1135454	1135576	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000081:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1135577	1140686	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=intron:NA12877_ch_T0000081:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1140687	1140830	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1140687	1140830	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000081:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1140831	1141695	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=intron:NA12877_ch_T0000081:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1141696	1141828	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1141696	1141828	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000081:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1141829	1144371	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=intron:NA12877_ch_T0000081:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1144372	1144556	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1144372	1144556	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000081:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1144557	1148191	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=intron:NA12877_ch_T0000081:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1148192	1148354	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1148192	1148354	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000081:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1148355	1150404	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=intron:NA12877_ch_T0000081:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1150405	1150792	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1150405	1150792	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000081:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1150793	1154962	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=intron:NA12877_ch_T0000081:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1154963	1155071	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1154963	1155071	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000081:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1155072	1157985	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=intron:NA12877_ch_T0000081:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1157986	1158047	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1157986	1158047	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000081:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1158048	1158657	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=intron:NA12877_ch_T0000081:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1158658	1158722	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1158658	1158722	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000081:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1158723	1162060	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=intron:NA12877_ch_T0000081:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1162061	1162108	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1162061	1162108	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000081:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1162109	1165149	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=intron:NA12877_ch_T0000081:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1165150	1165281	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1165150	1165200	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000081:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1165198	1165200	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=start_codon:NA12877_ch_T0000081;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1165282	1176748	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=intron:NA12877_ch_T0000081:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1176749	1176893	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=NA12877_ch_T0000081;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000081;transcript_name=NA12877_ch_T0000081;gene_name=ASMTL;ID=exon:NA12877_ch_T0000081:12;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1127627	1176060	100	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_G0000022;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=NA12877_ch_T0000082;Name=ASMTL
NA12877_chrY	CAT	exon	1127627	1127975	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=exon:NA12877_ch_T0000082:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1127755	1127975	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000082:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1127755	1127757	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=stop_codon:NA12877_ch_T0000082;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1127976	1135453	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=intron:NA12877_ch_T0000082:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1135454	1135576	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=exon:NA12877_ch_T0000082:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1135454	1135576	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000082:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1135577	1140686	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=intron:NA12877_ch_T0000082:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1140687	1140830	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=exon:NA12877_ch_T0000082:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1140687	1140830	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000082:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1140831	1141695	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=intron:NA12877_ch_T0000082:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1141696	1141828	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=exon:NA12877_ch_T0000082:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1141696	1141828	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000082:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1141829	1144371	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=intron:NA12877_ch_T0000082:3;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1144372	1144556	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=exon:NA12877_ch_T0000082:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1144372	1144556	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000082:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1144557	1148191	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=intron:NA12877_ch_T0000082:4;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1148192	1148354	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=exon:NA12877_ch_T0000082:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1148192	1148354	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000082:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1148355	1150404	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=intron:NA12877_ch_T0000082:5;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1150405	1150792	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=exon:NA12877_ch_T0000082:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1150405	1150792	.	-	1	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000082:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1150793	1154962	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=intron:NA12877_ch_T0000082:6;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1154963	1155071	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=exon:NA12877_ch_T0000082:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1154963	1155071	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000082:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1155072	1157985	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=intron:NA12877_ch_T0000082:7;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1157986	1158047	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=exon:NA12877_ch_T0000082:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1157986	1158047	.	-	1	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000082:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1158048	1158657	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=intron:NA12877_ch_T0000082:8;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1158658	1158722	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=exon:NA12877_ch_T0000082:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1158658	1158722	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000082:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1158723	1165149	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=intron:NA12877_ch_T0000082:9;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1165150	1165281	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=exon:NA12877_ch_T0000082:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1165150	1165281	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000082:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1165282	1175878	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=intron:NA12877_ch_T0000082:10;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1175879	1176060	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=exon:NA12877_ch_T0000082:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1175879	1175971	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=CDS:NA12877_ch_T0000082:11;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1175969	1175971	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=NA12877_ch_T0000082;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000082;transcript_name=NA12877_ch_T0000082;gene_name=ASMTL;ID=start_codon:NA12877_ch_T0000082;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1150398	1158355	1000	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.657;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=NA12877_ch_T0000086;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_G0000022;transcript_name=NA12877_ch_T0000086;gene_name=ASMTL;ID=NA12877_ch_T0000086;Name=ASMTL
NA12877_chrY	CAT	exon	1150398	1150792	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=NA12877_ch_T0000086;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000086;transcript_name=NA12877_ch_T0000086;gene_name=ASMTL;ID=exon:NA12877_ch_T0000086:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1150793	1154962	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=NA12877_ch_T0000086;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000086;transcript_name=NA12877_ch_T0000086;gene_name=ASMTL;ID=intron:NA12877_ch_T0000086:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1154963	1155071	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=NA12877_ch_T0000086;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000086;transcript_name=NA12877_ch_T0000086;gene_name=ASMTL;ID=exon:NA12877_ch_T0000086:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1155072	1157985	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=NA12877_ch_T0000086;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000086;transcript_name=NA12877_ch_T0000086;gene_name=ASMTL;ID=intron:NA12877_ch_T0000086:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1157986	1158355	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.657;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=NA12877_ch_T0000086;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000086;transcript_name=NA12877_ch_T0000086;gene_name=ASMTL;ID=exon:NA12877_ch_T0000086:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1154596	1158692	1000	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.476;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=NA12877_ch_T0000087;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_G0000022;transcript_name=NA12877_ch_T0000087;gene_name=ASMTL;ID=NA12877_ch_T0000087;Name=ASMTL
NA12877_chrY	CAT	exon	1154596	1155071	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=NA12877_ch_T0000087;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000087;transcript_name=NA12877_ch_T0000087;gene_name=ASMTL;ID=exon:NA12877_ch_T0000087:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1155072	1157985	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=NA12877_ch_T0000087;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000087;transcript_name=NA12877_ch_T0000087;gene_name=ASMTL;ID=intron:NA12877_ch_T0000087:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1157986	1158047	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=NA12877_ch_T0000087;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000087;transcript_name=NA12877_ch_T0000087;gene_name=ASMTL;ID=exon:NA12877_ch_T0000087:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1158048	1158657	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=NA12877_ch_T0000087;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000087;transcript_name=NA12877_ch_T0000087;gene_name=ASMTL;ID=intron:NA12877_ch_T0000087:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1158658	1158692	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=NA12877_ch_T0000087;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000087;transcript_name=NA12877_ch_T0000087;gene_name=ASMTL;ID=exon:NA12877_ch_T0000087:2;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1164556	1176003	1000	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=NA12877_ch_T0000088;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_G0000022;transcript_name=NA12877_ch_T0000088;gene_name=ASMTL;ID=NA12877_ch_T0000088;Name=ASMTL
NA12877_chrY	CAT	exon	1164556	1165281	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=NA12877_ch_T0000088;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000088;transcript_name=NA12877_ch_T0000088;gene_name=ASMTL;ID=exon:NA12877_ch_T0000088:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1165282	1175878	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=NA12877_ch_T0000088;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000088;transcript_name=NA12877_ch_T0000088;gene_name=ASMTL;ID=intron:NA12877_ch_T0000088:0;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1175879	1176003	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=NA12877_ch_T0000088;gene_id=NA12877_ch_G0000022;Parent=NA12877_ch_T0000088;transcript_name=NA12877_ch_T0000088;gene_name=ASMTL;ID=exon:NA12877_ch_T0000088:1;Name=ASMTL;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1185999	1260206	.	-	.	source_gene_common_name=P2RY8;source_gene=ENSG00000292333.1;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;gene_id=NA12877_ch_G0000023;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff;ID=NA12877_ch_G0000023;Name=P2RY8
NA12877_chrY	CAT	transcript	1185999	1260206	100	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=NA12877_ch_T0000089;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_G0000023;transcript_name=NA12877_ch_T0000089;gene_name=P2RY8;ID=NA12877_ch_T0000089;Name=P2RY8
NA12877_chrY	CAT	exon	1185999	1190000	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=NA12877_ch_T0000089;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_T0000089;transcript_name=NA12877_ch_T0000089;gene_name=P2RY8;ID=exon:NA12877_ch_T0000089:0;Name=P2RY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1188897	1189976	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=NA12877_ch_T0000089;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_T0000089;transcript_name=NA12877_ch_T0000089;gene_name=P2RY8;ID=CDS:NA12877_ch_T0000089:0;Name=P2RY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1188897	1188899	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=NA12877_ch_T0000089;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_T0000089;transcript_name=NA12877_ch_T0000089;gene_name=P2RY8;ID=stop_codon:NA12877_ch_T0000089;Name=P2RY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1189974	1189976	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=NA12877_ch_T0000089;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_T0000089;transcript_name=NA12877_ch_T0000089;gene_name=P2RY8;ID=start_codon:NA12877_ch_T0000089;Name=P2RY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1190001	1259941	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=NA12877_ch_T0000089;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_T0000089;transcript_name=NA12877_ch_T0000089;gene_name=P2RY8;ID=intron:NA12877_ch_T0000089:0;Name=P2RY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1259942	1260206	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=NA12877_ch_T0000089;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_T0000089;transcript_name=NA12877_ch_T0000089;gene_name=P2RY8;ID=exon:NA12877_ch_T0000089:1;Name=P2RY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1189855	1217832	100	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=NA12877_ch_T0000090;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_G0000023;transcript_name=NA12877_ch_T0000090;gene_name=P2RY8;ID=NA12877_ch_T0000090;Name=P2RY8
NA12877_chrY	CAT	exon	1189855	1190000	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=NA12877_ch_T0000090;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_T0000090;transcript_name=NA12877_ch_T0000090;gene_name=P2RY8;ID=exon:NA12877_ch_T0000090:0;Name=P2RY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1189855	1189976	.	-	0	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=NA12877_ch_T0000090;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_T0000090;transcript_name=NA12877_ch_T0000090;gene_name=P2RY8;ID=CDS:NA12877_ch_T0000090:0;Name=P2RY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1189974	1189976	.	-	0	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=NA12877_ch_T0000090;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_T0000090;transcript_name=NA12877_ch_T0000090;gene_name=P2RY8;ID=start_codon:NA12877_ch_T0000090;Name=P2RY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1190001	1217571	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=NA12877_ch_T0000090;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_T0000090;transcript_name=NA12877_ch_T0000090;gene_name=P2RY8;ID=intron:NA12877_ch_T0000090:0;Name=P2RY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1217572	1217832	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=NA12877_ch_T0000090;gene_id=NA12877_ch_G0000023;Parent=NA12877_ch_T0000090;transcript_name=NA12877_ch_T0000090;gene_name=P2RY8;ID=exon:NA12877_ch_T0000090:1;Name=P2RY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1275798	1288061	.	-	.	source_gene_common_name=ENSG00000310546;source_gene=ENSG00000310546.1;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;gene_id=NA12877_ch_G0000024;gene_biotype=lncRNA;gene_name=ENSG00000310546;gene_sources=liftoff;ID=NA12877_ch_G0000024;Name=ENSG00000310546
NA12877_chrY	CAT	transcript	1275798	1288061	1000	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.44100000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=NA12877_ch_T0000091;gene_id=NA12877_ch_G0000024;Parent=NA12877_ch_G0000024;transcript_name=NA12877_ch_T0000091;gene_name=ENSG00000310546;ID=NA12877_ch_T0000091;Name=ENSG00000310546
NA12877_chrY	CAT	exon	1275798	1276411	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.44100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=NA12877_ch_T0000091;gene_id=NA12877_ch_G0000024;Parent=NA12877_ch_T0000091;transcript_name=NA12877_ch_T0000091;gene_name=ENSG00000310546;ID=exon:NA12877_ch_T0000091:0;Name=ENSG00000310546;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1276412	1287959	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.44100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=NA12877_ch_T0000091;gene_id=NA12877_ch_G0000024;Parent=NA12877_ch_T0000091;transcript_name=NA12877_ch_T0000091;gene_name=ENSG00000310546;ID=intron:NA12877_ch_T0000091:0;Name=ENSG00000310546;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1287960	1288061	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.44100000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=NA12877_ch_T0000091;gene_id=NA12877_ch_G0000024;Parent=NA12877_ch_T0000091;transcript_name=NA12877_ch_T0000091;gene_name=ENSG00000310546;ID=exon:NA12877_ch_T0000091:1;Name=ENSG00000310546;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1314580	1325356	.	+	.	source_gene_common_name=AKAP17A;source_gene=ENSG00000292343.1;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;gene_id=NA12877_ch_G0000025;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff;ID=NA12877_ch_G0000025;Name=AKAP17A
NA12877_chrY	CAT	transcript	1314580	1325356	100	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_G0000025;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=NA12877_ch_T0000092;Name=AKAP17A
NA12877_chrY	CAT	exon	1314580	1314745	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000092:0;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1314746	1316419	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=intron:NA12877_ch_T0000092:0;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1316420	1317200	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000092:1;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1316439	1317200	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=CDS:NA12877_ch_T0000092:0;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1316439	1316441	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=start_codon:NA12877_ch_T0000092;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1317201	1318331	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=intron:NA12877_ch_T0000092:1;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1318332	1318480	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000092:2;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1318332	1318480	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=CDS:NA12877_ch_T0000092:1;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1318481	1322027	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=intron:NA12877_ch_T0000092:2;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1322028	1322268	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000092:3;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1322028	1322268	.	+	1	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=CDS:NA12877_ch_T0000092:2;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1322269	1323494	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=intron:NA12877_ch_T0000092:3;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1323495	1325356	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000092:4;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1323495	1324430	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=CDS:NA12877_ch_T0000092:3;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1324428	1324430	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=NA12877_ch_T0000092;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000092;transcript_name=NA12877_ch_T0000092;gene_name=AKAP17A;ID=stop_codon:NA12877_ch_T0000092;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1314599	1325338	1000	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_G0000025;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=NA12877_ch_T0000093;Name=AKAP17A
NA12877_chrY	CAT	exon	1314599	1314745	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000093:0;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1314746	1316419	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=intron:NA12877_ch_T0000093:0;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1316420	1317200	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000093:1;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1316439	1317200	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=CDS:NA12877_ch_T0000093:0;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1316439	1316441	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=start_codon:NA12877_ch_T0000093;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1317201	1318331	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=intron:NA12877_ch_T0000093:1;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1318332	1318480	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000093:2;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1318332	1318480	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=CDS:NA12877_ch_T0000093:1;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1318481	1322027	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=intron:NA12877_ch_T0000093:2;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1322028	1322268	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000093:3;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1322028	1322268	.	+	1	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=CDS:NA12877_ch_T0000093:2;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1322269	1322973	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=intron:NA12877_ch_T0000093:3;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1322974	1323043	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000093:4;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1322974	1322979	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=CDS:NA12877_ch_T0000093:3;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1322977	1322979	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=stop_codon:NA12877_ch_T0000093;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1323044	1323494	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=intron:NA12877_ch_T0000093:4;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1323495	1325338	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=NA12877_ch_T0000093;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000093;transcript_name=NA12877_ch_T0000093;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000093:5;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1314601	1323139	100	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_G0000025;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=NA12877_ch_T0000094;Name=AKAP17A
NA12877_chrY	CAT	exon	1314601	1314745	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000094;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000094:0;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1314746	1316419	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000094;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=intron:NA12877_ch_T0000094:0;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1316420	1317200	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000094;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000094:1;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1316439	1317200	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000094;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=CDS:NA12877_ch_T0000094:0;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1316439	1316441	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000094;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=start_codon:NA12877_ch_T0000094;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1317201	1318331	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000094;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=intron:NA12877_ch_T0000094:1;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1318332	1318480	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000094;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000094:2;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1318332	1318480	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000094;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=CDS:NA12877_ch_T0000094:1;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1318481	1322027	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000094;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=intron:NA12877_ch_T0000094:2;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1322028	1323139	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000094;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=exon:NA12877_ch_T0000094:3;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1322028	1322457	.	+	1	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000094;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=CDS:NA12877_ch_T0000094:2;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1322455	1322457	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=NA12877_ch_T0000094;gene_id=NA12877_ch_G0000025;Parent=NA12877_ch_T0000094;transcript_name=NA12877_ch_T0000094;gene_name=AKAP17A;ID=stop_codon:NA12877_ch_T0000094;Name=AKAP17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1337516	1362401	.	+	.	source_gene_common_name=ASMT;source_gene=ENSG00000292336.1;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;gene_id=NA12877_ch_G0000026;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff;ID=NA12877_ch_G0000026;Name=ASMT
NA12877_chrY	CAT	transcript	1337516	1362401	100	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_G0000026;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=NA12877_ch_T0000095;Name=ASMT
NA12877_chrY	CAT	exon	1337516	1337725	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=exon:NA12877_ch_T0000095:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1337657	1337725	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=CDS:NA12877_ch_T0000095:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1337657	1337659	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=start_codon:NA12877_ch_T0000095;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1337726	1345590	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=intron:NA12877_ch_T0000095:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1345591	1345765	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=exon:NA12877_ch_T0000095:1;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1345591	1345765	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=CDS:NA12877_ch_T0000095:1;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1345766	1346720	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=intron:NA12877_ch_T0000095:1;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1346721	1346850	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=exon:NA12877_ch_T0000095:2;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1346721	1346850	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=CDS:NA12877_ch_T0000095:2;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1346851	1350154	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=intron:NA12877_ch_T0000095:2;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1350155	1350223	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=exon:NA12877_ch_T0000095:3;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1350155	1350223	.	+	1	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=CDS:NA12877_ch_T0000095:3;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1350224	1352263	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=intron:NA12877_ch_T0000095:3;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1352264	1352382	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=exon:NA12877_ch_T0000095:4;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1352264	1352382	.	+	1	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=CDS:NA12877_ch_T0000095:4;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1352383	1355152	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=intron:NA12877_ch_T0000095:4;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1355153	1355236	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=exon:NA12877_ch_T0000095:5;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1355153	1355236	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=CDS:NA12877_ch_T0000095:5;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1355237	1355597	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=intron:NA12877_ch_T0000095:5;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1355598	1355738	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=exon:NA12877_ch_T0000095:6;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1355598	1355738	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=CDS:NA12877_ch_T0000095:6;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1355739	1358885	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=intron:NA12877_ch_T0000095:6;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1358886	1359008	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=exon:NA12877_ch_T0000095:7;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1358886	1359008	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=CDS:NA12877_ch_T0000095:7;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1359009	1362122	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=intron:NA12877_ch_T0000095:7;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1362123	1362401	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=exon:NA12877_ch_T0000095:8;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1362123	1362334	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=CDS:NA12877_ch_T0000095:8;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1362332	1362334	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=NA12877_ch_T0000095;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000095;transcript_name=NA12877_ch_T0000095;gene_name=ASMT;ID=stop_codon:NA12877_ch_T0000095;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1337621	1362347	100	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_G0000026;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=NA12877_ch_T0000096;Name=ASMT
NA12877_chrY	CAT	exon	1337621	1337725	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=exon:NA12877_ch_T0000096:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1337657	1337725	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=CDS:NA12877_ch_T0000096:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1337657	1337659	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=start_codon:NA12877_ch_T0000096;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1337726	1345590	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=intron:NA12877_ch_T0000096:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1345591	1345765	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=exon:NA12877_ch_T0000096:1;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1345591	1345765	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=CDS:NA12877_ch_T0000096:1;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1345766	1346720	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=intron:NA12877_ch_T0000096:1;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1346721	1346850	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=exon:NA12877_ch_T0000096:2;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1346721	1346850	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=CDS:NA12877_ch_T0000096:2;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1346851	1350154	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=intron:NA12877_ch_T0000096:2;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1350155	1350223	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=exon:NA12877_ch_T0000096:3;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1350155	1350223	.	+	1	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=CDS:NA12877_ch_T0000096:3;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1350224	1352263	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=intron:NA12877_ch_T0000096:3;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1352264	1352382	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=exon:NA12877_ch_T0000096:4;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1352264	1352382	.	+	1	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=CDS:NA12877_ch_T0000096:4;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1352383	1355597	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=intron:NA12877_ch_T0000096:4;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1355598	1355738	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=exon:NA12877_ch_T0000096:5;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1355598	1355738	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=CDS:NA12877_ch_T0000096:5;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1355739	1358885	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=intron:NA12877_ch_T0000096:5;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1358886	1359008	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=exon:NA12877_ch_T0000096:6;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1358886	1359008	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=CDS:NA12877_ch_T0000096:6;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1359009	1362122	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=intron:NA12877_ch_T0000096:6;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1362123	1362347	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=exon:NA12877_ch_T0000096:7;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1362123	1362334	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=CDS:NA12877_ch_T0000096:7;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1362332	1362334	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=NA12877_ch_T0000096;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000096;transcript_name=NA12877_ch_T0000096;gene_name=ASMT;ID=stop_codon:NA12877_ch_T0000096;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1337632	1362401	100	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_G0000026;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=NA12877_ch_T0000097;Name=ASMT
NA12877_chrY	CAT	exon	1337632	1337725	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=exon:NA12877_ch_T0000097:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1337657	1337725	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=CDS:NA12877_ch_T0000097:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1337657	1337659	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=start_codon:NA12877_ch_T0000097;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1337726	1345590	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=intron:NA12877_ch_T0000097:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1345591	1345765	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=exon:NA12877_ch_T0000097:1;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1345591	1345765	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=CDS:NA12877_ch_T0000097:1;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1345766	1346720	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=intron:NA12877_ch_T0000097:1;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1346721	1346850	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=exon:NA12877_ch_T0000097:2;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1346721	1346850	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=CDS:NA12877_ch_T0000097:2;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1346851	1350154	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=intron:NA12877_ch_T0000097:2;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1350155	1350223	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=exon:NA12877_ch_T0000097:3;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1350155	1350223	.	+	1	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=CDS:NA12877_ch_T0000097:3;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1350224	1352263	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=intron:NA12877_ch_T0000097:3;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1352264	1352382	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=exon:NA12877_ch_T0000097:4;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1352264	1352382	.	+	1	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=CDS:NA12877_ch_T0000097:4;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1352383	1358885	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=intron:NA12877_ch_T0000097:4;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1358886	1359008	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=exon:NA12877_ch_T0000097:5;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1358886	1359008	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=CDS:NA12877_ch_T0000097:5;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1359009	1362122	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=intron:NA12877_ch_T0000097:5;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1362123	1362401	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=exon:NA12877_ch_T0000097:6;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1362123	1362334	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=CDS:NA12877_ch_T0000097:6;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1362332	1362334	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=NA12877_ch_T0000097;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000097;transcript_name=NA12877_ch_T0000097;gene_name=ASMT;ID=stop_codon:NA12877_ch_T0000097;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1350198	1358911	1000	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=299.608;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=NA12877_ch_T0000099;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_G0000026;transcript_name=NA12877_ch_T0000099;gene_name=ASMT;ID=NA12877_ch_T0000099;Name=ASMT
NA12877_chrY	CAT	exon	1350198	1350485	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=299.608;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=NA12877_ch_T0000099;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000099;transcript_name=NA12877_ch_T0000099;gene_name=ASMT;ID=exon:NA12877_ch_T0000099:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1350486	1358689	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=299.608;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=NA12877_ch_T0000099;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000099;transcript_name=NA12877_ch_T0000099;gene_name=ASMT;ID=intron:NA12877_ch_T0000099:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1358690	1358911	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=299.608;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=NA12877_ch_T0000099;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000099;transcript_name=NA12877_ch_T0000099;gene_name=ASMT;ID=exon:NA12877_ch_T0000099:1;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1358846	1362401	100	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=NA12877_ch_T0000100;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_G0000026;transcript_name=NA12877_ch_T0000100;gene_name=ASMT;ID=NA12877_ch_T0000100;Name=ASMT
NA12877_chrY	CAT	exon	1358846	1359008	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=NA12877_ch_T0000100;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000100;transcript_name=NA12877_ch_T0000100;gene_name=ASMT;ID=exon:NA12877_ch_T0000100:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1358846	1359008	.	+	0	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=NA12877_ch_T0000100;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000100;transcript_name=NA12877_ch_T0000100;gene_name=ASMT;ID=CDS:NA12877_ch_T0000100:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1359009	1362122	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=NA12877_ch_T0000100;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000100;transcript_name=NA12877_ch_T0000100;gene_name=ASMT;ID=intron:NA12877_ch_T0000100:0;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1362123	1362401	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=NA12877_ch_T0000100;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000100;transcript_name=NA12877_ch_T0000100;gene_name=ASMT;ID=exon:NA12877_ch_T0000100:1;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1362123	1362334	.	+	2	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=NA12877_ch_T0000100;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000100;transcript_name=NA12877_ch_T0000100;gene_name=ASMT;ID=CDS:NA12877_ch_T0000100:1;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1362332	1362334	.	+	0	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=NA12877_ch_T0000100;gene_id=NA12877_ch_G0000026;Parent=NA12877_ch_T0000100;transcript_name=NA12877_ch_T0000100;gene_name=ASMT;ID=stop_codon:NA12877_ch_T0000100;Name=ASMT;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1337989	1338257	.	-	.	source_gene_common_name=CRLF2;source_gene=ENSG00000292363.1;gene_id=NA12877_ch_G0000027;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff;ID=NA12877_ch_G0000027;Name=CRLF2
NA12877_chrY	CAT	transcript	1337989	1338257	1000	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;transcript_id=NA12877_ch_T0000098;gene_id=NA12877_ch_G0000027;Parent=NA12877_ch_G0000027;transcript_name=NA12877_ch_T0000098;gene_name=CRLF2;ID=NA12877_ch_T0000098;Name=CRLF2
NA12877_chrY	CAT	exon	1337989	1338257	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;transcript_id=NA12877_ch_T0000098;gene_id=NA12877_ch_G0000027;Parent=NA12877_ch_T0000098;transcript_name=NA12877_ch_T0000098;gene_name=CRLF2;ID=exon:NA12877_ch_T0000098:0;Name=CRLF2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1338038	1338257	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;transcript_id=NA12877_ch_T0000098;gene_id=NA12877_ch_G0000027;Parent=NA12877_ch_T0000098;transcript_name=NA12877_ch_T0000098;gene_name=CRLF2;ID=CDS:NA12877_ch_T0000098:0;Name=CRLF2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1338038	1338040	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;transcript_id=NA12877_ch_T0000098;gene_id=NA12877_ch_G0000027;Parent=NA12877_ch_T0000098;transcript_name=NA12877_ch_T0000098;gene_name=CRLF2;ID=stop_codon:NA12877_ch_T0000098;Name=CRLF2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1338255	1338257	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;transcript_id=NA12877_ch_T0000098;gene_id=NA12877_ch_G0000027;Parent=NA12877_ch_T0000098;transcript_name=NA12877_ch_T0000098;gene_name=CRLF2;ID=start_codon:NA12877_ch_T0000098;Name=CRLF2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1377054	1481549	.	+	.	source_gene_common_name=LINC02968;source_gene=ENSG00000310540.2;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;gene_id=NA12877_ch_G0000028;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff;ID=NA12877_ch_G0000028;Name=LINC02968
NA12877_chrY	CAT	transcript	1377054	1449469	1000	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=NA12877_ch_T0000101;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000101;gene_name=LINC02968;ID=NA12877_ch_T0000101;Name=LINC02968
NA12877_chrY	CAT	exon	1377054	1377190	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=NA12877_ch_T0000101;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000101;transcript_name=NA12877_ch_T0000101;gene_name=LINC02968;ID=exon:NA12877_ch_T0000101:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1377191	1444470	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=NA12877_ch_T0000101;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000101;transcript_name=NA12877_ch_T0000101;gene_name=LINC02968;ID=intron:NA12877_ch_T0000101:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444471	1444558	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=NA12877_ch_T0000101;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000101;transcript_name=NA12877_ch_T0000101;gene_name=LINC02968;ID=exon:NA12877_ch_T0000101:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1444559	1449305	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=NA12877_ch_T0000101;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000101;transcript_name=NA12877_ch_T0000101;gene_name=LINC02968;ID=intron:NA12877_ch_T0000101:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1449306	1449469	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=NA12877_ch_T0000101;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000101;transcript_name=NA12877_ch_T0000101;gene_name=LINC02968;ID=exon:NA12877_ch_T0000101:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1377059	1469716	1000	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=NA12877_ch_T0000102;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000102;gene_name=LINC02968;ID=NA12877_ch_T0000102;Name=LINC02968
NA12877_chrY	CAT	exon	1377059	1377190	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=NA12877_ch_T0000102;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000102;transcript_name=NA12877_ch_T0000102;gene_name=LINC02968;ID=exon:NA12877_ch_T0000102:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1377191	1444470	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=NA12877_ch_T0000102;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000102;transcript_name=NA12877_ch_T0000102;gene_name=LINC02968;ID=intron:NA12877_ch_T0000102:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444471	1444558	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=NA12877_ch_T0000102;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000102;transcript_name=NA12877_ch_T0000102;gene_name=LINC02968;ID=exon:NA12877_ch_T0000102:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1444559	1469524	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=NA12877_ch_T0000102;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000102;transcript_name=NA12877_ch_T0000102;gene_name=LINC02968;ID=intron:NA12877_ch_T0000102:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1469525	1469716	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=NA12877_ch_T0000102;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000102;transcript_name=NA12877_ch_T0000102;gene_name=LINC02968;ID=exon:NA12877_ch_T0000102:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1377059	1377757	1000	+	.	source_transcript=ENST00000850749.1;source_transcript_name=LINC02968-245;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850749.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850749.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850749.1,ENST00000850749.1;transcript_id=NA12877_ch_T0000103;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000103;gene_name=LINC02968;ID=NA12877_ch_T0000103;Name=LINC02968
NA12877_chrY	CAT	exon	1377059	1377757	.	+	.	source_transcript=ENST00000850749.1;source_transcript_name=LINC02968-245;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850749.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850749.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850749.1,ENST00000850749.1;transcript_id=NA12877_ch_T0000103;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000103;transcript_name=NA12877_ch_T0000103;gene_name=LINC02968;ID=exon:NA12877_ch_T0000103:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1377061	1380212	1000	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=NA12877_ch_T0000104;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000104;gene_name=LINC02968;ID=NA12877_ch_T0000104;Name=LINC02968
NA12877_chrY	CAT	exon	1377061	1377190	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=NA12877_ch_T0000104;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000104;transcript_name=NA12877_ch_T0000104;gene_name=LINC02968;ID=exon:NA12877_ch_T0000104:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1377191	1379465	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=NA12877_ch_T0000104;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000104;transcript_name=NA12877_ch_T0000104;gene_name=LINC02968;ID=intron:NA12877_ch_T0000104:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1379466	1380212	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=NA12877_ch_T0000104;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000104;transcript_name=NA12877_ch_T0000104;gene_name=LINC02968;ID=exon:NA12877_ch_T0000104:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1377062	1380209	1000	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=NA12877_ch_T0000105;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000105;gene_name=LINC02968;ID=NA12877_ch_T0000105;Name=LINC02968
NA12877_chrY	CAT	exon	1377062	1377190	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=NA12877_ch_T0000105;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000105;transcript_name=NA12877_ch_T0000105;gene_name=LINC02968;ID=exon:NA12877_ch_T0000105:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1377191	1379574	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=NA12877_ch_T0000105;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000105;transcript_name=NA12877_ch_T0000105;gene_name=LINC02968;ID=intron:NA12877_ch_T0000105:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1379575	1380209	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=NA12877_ch_T0000105;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000105;transcript_name=NA12877_ch_T0000105;gene_name=LINC02968;ID=exon:NA12877_ch_T0000105:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1377064	1474086	1000	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=NA12877_ch_T0000106;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000106;gene_name=LINC02968;ID=NA12877_ch_T0000106;Name=LINC02968
NA12877_chrY	CAT	exon	1377064	1377190	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=NA12877_ch_T0000106;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000106;transcript_name=NA12877_ch_T0000106;gene_name=LINC02968;ID=exon:NA12877_ch_T0000106:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1377191	1444470	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=NA12877_ch_T0000106;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000106;transcript_name=NA12877_ch_T0000106;gene_name=LINC02968;ID=intron:NA12877_ch_T0000106:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444471	1444558	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=NA12877_ch_T0000106;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000106;transcript_name=NA12877_ch_T0000106;gene_name=LINC02968;ID=exon:NA12877_ch_T0000106:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1444559	1469524	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=NA12877_ch_T0000106;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000106;transcript_name=NA12877_ch_T0000106;gene_name=LINC02968;ID=intron:NA12877_ch_T0000106:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1469525	1469584	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=NA12877_ch_T0000106;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000106;transcript_name=NA12877_ch_T0000106;gene_name=LINC02968;ID=exon:NA12877_ch_T0000106:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1469585	1473921	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=NA12877_ch_T0000106;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000106;transcript_name=NA12877_ch_T0000106;gene_name=LINC02968;ID=intron:NA12877_ch_T0000106:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1473922	1474086	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=299.773;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=NA12877_ch_T0000106;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000106;transcript_name=NA12877_ch_T0000106;gene_name=LINC02968;ID=exon:NA12877_ch_T0000106:3;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1377065	1381624	1000	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=299.632;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=NA12877_ch_T0000107;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000107;gene_name=LINC02968;ID=NA12877_ch_T0000107;Name=LINC02968
NA12877_chrY	CAT	exon	1377065	1377190	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=299.632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=NA12877_ch_T0000107;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000107;transcript_name=NA12877_ch_T0000107;gene_name=LINC02968;ID=exon:NA12877_ch_T0000107:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1377191	1381478	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=299.632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=NA12877_ch_T0000107;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000107;transcript_name=NA12877_ch_T0000107;gene_name=LINC02968;ID=intron:NA12877_ch_T0000107:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1381479	1381624	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=299.632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=NA12877_ch_T0000107;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000107;transcript_name=NA12877_ch_T0000107;gene_name=LINC02968;ID=exon:NA12877_ch_T0000107:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1377079	1380184	1000	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1,ENST00000850747.1;transcript_id=NA12877_ch_T0000108;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000108;gene_name=LINC02968;ID=NA12877_ch_T0000108;Name=LINC02968
NA12877_chrY	CAT	exon	1377079	1377190	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1,ENST00000850747.1;transcript_id=NA12877_ch_T0000108;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000108;transcript_name=NA12877_ch_T0000108;gene_name=LINC02968;ID=exon:NA12877_ch_T0000108:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1377191	1379577	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1,ENST00000850747.1;transcript_id=NA12877_ch_T0000108;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000108;transcript_name=NA12877_ch_T0000108;gene_name=LINC02968;ID=intron:NA12877_ch_T0000108:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1379578	1380184	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1,ENST00000850747.1;transcript_id=NA12877_ch_T0000108;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000108;transcript_name=NA12877_ch_T0000108;gene_name=LINC02968;ID=exon:NA12877_ch_T0000108:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1377081	1397000	1000	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.517;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=NA12877_ch_T0000109;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000109;gene_name=LINC02968;ID=NA12877_ch_T0000109;Name=LINC02968
NA12877_chrY	CAT	exon	1377081	1377190	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.517;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=NA12877_ch_T0000109;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000109;transcript_name=NA12877_ch_T0000109;gene_name=LINC02968;ID=exon:NA12877_ch_T0000109:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1377191	1381478	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.517;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=NA12877_ch_T0000109;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000109;transcript_name=NA12877_ch_T0000109;gene_name=LINC02968;ID=intron:NA12877_ch_T0000109:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1381479	1381589	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.517;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=NA12877_ch_T0000109;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000109;transcript_name=NA12877_ch_T0000109;gene_name=LINC02968;ID=exon:NA12877_ch_T0000109:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1381590	1396807	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.517;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=NA12877_ch_T0000109;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000109;transcript_name=NA12877_ch_T0000109;gene_name=LINC02968;ID=intron:NA12877_ch_T0000109:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1396808	1397000	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.517;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=NA12877_ch_T0000109;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000109;transcript_name=NA12877_ch_T0000109;gene_name=LINC02968;ID=exon:NA12877_ch_T0000109:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1377081	1381790	1000	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.865;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=NA12877_ch_T0000110;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000110;gene_name=LINC02968;ID=NA12877_ch_T0000110;Name=LINC02968
NA12877_chrY	CAT	exon	1377081	1377190	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=NA12877_ch_T0000110;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000110;transcript_name=NA12877_ch_T0000110;gene_name=LINC02968;ID=exon:NA12877_ch_T0000110:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1377191	1381047	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=NA12877_ch_T0000110;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000110;transcript_name=NA12877_ch_T0000110;gene_name=LINC02968;ID=intron:NA12877_ch_T0000110:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1381048	1381370	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=NA12877_ch_T0000110;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000110;transcript_name=NA12877_ch_T0000110;gene_name=LINC02968;ID=exon:NA12877_ch_T0000110:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1381371	1381478	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=NA12877_ch_T0000110;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000110;transcript_name=NA12877_ch_T0000110;gene_name=LINC02968;ID=intron:NA12877_ch_T0000110:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1381479	1381790	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=NA12877_ch_T0000110;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000110;transcript_name=NA12877_ch_T0000110;gene_name=LINC02968;ID=exon:NA12877_ch_T0000110:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1377095	1383783	1000	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.601;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=NA12877_ch_T0000111;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000111;gene_name=LINC02968;ID=NA12877_ch_T0000111;Name=LINC02968
NA12877_chrY	CAT	exon	1377095	1377190	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.601;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=NA12877_ch_T0000111;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000111;transcript_name=NA12877_ch_T0000111;gene_name=LINC02968;ID=exon:NA12877_ch_T0000111:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1377191	1381478	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.601;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=NA12877_ch_T0000111;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000111;transcript_name=NA12877_ch_T0000111;gene_name=LINC02968;ID=intron:NA12877_ch_T0000111:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1381479	1381589	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.601;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=NA12877_ch_T0000111;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000111;transcript_name=NA12877_ch_T0000111;gene_name=LINC02968;ID=exon:NA12877_ch_T0000111:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1381590	1383489	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.601;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=NA12877_ch_T0000111;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000111;transcript_name=NA12877_ch_T0000111;gene_name=LINC02968;ID=intron:NA12877_ch_T0000111:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1383490	1383783	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.601;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=NA12877_ch_T0000111;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000111;transcript_name=NA12877_ch_T0000111;gene_name=LINC02968;ID=exon:NA12877_ch_T0000111:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1377122	1481549	1000	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=NA12877_ch_T0000112;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000112;gene_name=LINC02968;ID=NA12877_ch_T0000112;Name=LINC02968
NA12877_chrY	CAT	exon	1377122	1377190	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=NA12877_ch_T0000112;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000112;transcript_name=NA12877_ch_T0000112;gene_name=LINC02968;ID=exon:NA12877_ch_T0000112:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1377191	1444470	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=NA12877_ch_T0000112;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000112;transcript_name=NA12877_ch_T0000112;gene_name=LINC02968;ID=intron:NA12877_ch_T0000112:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444471	1444558	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=NA12877_ch_T0000112;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000112;transcript_name=NA12877_ch_T0000112;gene_name=LINC02968;ID=exon:NA12877_ch_T0000112:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1444559	1473921	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=NA12877_ch_T0000112;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000112;transcript_name=NA12877_ch_T0000112;gene_name=LINC02968;ID=intron:NA12877_ch_T0000112:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1473922	1474223	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=NA12877_ch_T0000112;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000112;transcript_name=NA12877_ch_T0000112;gene_name=LINC02968;ID=exon:NA12877_ch_T0000112:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1474224	1481195	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=NA12877_ch_T0000112;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000112;transcript_name=NA12877_ch_T0000112;gene_name=LINC02968;ID=intron:NA12877_ch_T0000112:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1481196	1481549	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=NA12877_ch_T0000112;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000112;transcript_name=NA12877_ch_T0000112;gene_name=LINC02968;ID=exon:NA12877_ch_T0000112:3;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1381113	1449470	1000	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=NA12877_ch_T0000113;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000113;gene_name=LINC02968;ID=NA12877_ch_T0000113;Name=LINC02968
NA12877_chrY	CAT	exon	1381113	1381370	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=NA12877_ch_T0000113;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000113;transcript_name=NA12877_ch_T0000113;gene_name=LINC02968;ID=exon:NA12877_ch_T0000113:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1381371	1444470	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=NA12877_ch_T0000113;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000113;transcript_name=NA12877_ch_T0000113;gene_name=LINC02968;ID=intron:NA12877_ch_T0000113:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444471	1444558	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=NA12877_ch_T0000113;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000113;transcript_name=NA12877_ch_T0000113;gene_name=LINC02968;ID=exon:NA12877_ch_T0000113:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1444559	1449305	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=NA12877_ch_T0000113;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000113;transcript_name=NA12877_ch_T0000113;gene_name=LINC02968;ID=intron:NA12877_ch_T0000113:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1449306	1449470	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=NA12877_ch_T0000113;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000113;transcript_name=NA12877_ch_T0000113;gene_name=LINC02968;ID=exon:NA12877_ch_T0000113:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1381113	1449468	1000	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=NA12877_ch_T0000114;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000114;gene_name=LINC02968;ID=NA12877_ch_T0000114;Name=LINC02968
NA12877_chrY	CAT	exon	1381113	1381370	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=NA12877_ch_T0000114;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000114;transcript_name=NA12877_ch_T0000114;gene_name=LINC02968;ID=exon:NA12877_ch_T0000114:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1381371	1444470	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=NA12877_ch_T0000114;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000114;transcript_name=NA12877_ch_T0000114;gene_name=LINC02968;ID=intron:NA12877_ch_T0000114:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444471	1444558	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=NA12877_ch_T0000114;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000114;transcript_name=NA12877_ch_T0000114;gene_name=LINC02968;ID=exon:NA12877_ch_T0000114:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1444559	1444723	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=NA12877_ch_T0000114;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000114;transcript_name=NA12877_ch_T0000114;gene_name=LINC02968;ID=intron:NA12877_ch_T0000114:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444724	1444896	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=NA12877_ch_T0000114;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000114;transcript_name=NA12877_ch_T0000114;gene_name=LINC02968;ID=exon:NA12877_ch_T0000114:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1444897	1449305	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=NA12877_ch_T0000114;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000114;transcript_name=NA12877_ch_T0000114;gene_name=LINC02968;ID=intron:NA12877_ch_T0000114:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1449306	1449468	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=NA12877_ch_T0000114;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000114;transcript_name=NA12877_ch_T0000114;gene_name=LINC02968;ID=exon:NA12877_ch_T0000114:3;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1381113	1381624	1000	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.752;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=NA12877_ch_T0000115;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000115;gene_name=LINC02968;ID=NA12877_ch_T0000115;Name=LINC02968
NA12877_chrY	CAT	exon	1381113	1381370	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=NA12877_ch_T0000115;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000115;transcript_name=NA12877_ch_T0000115;gene_name=LINC02968;ID=exon:NA12877_ch_T0000115:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1381371	1381478	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=NA12877_ch_T0000115;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000115;transcript_name=NA12877_ch_T0000115;gene_name=LINC02968;ID=intron:NA12877_ch_T0000115:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1381479	1381624	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=NA12877_ch_T0000115;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000115;transcript_name=NA12877_ch_T0000115;gene_name=LINC02968;ID=exon:NA12877_ch_T0000115:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1381124	1444937	1000	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=NA12877_ch_T0000116;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000116;gene_name=LINC02968;ID=NA12877_ch_T0000116;Name=LINC02968
NA12877_chrY	CAT	exon	1381124	1381370	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=NA12877_ch_T0000116;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000116;transcript_name=NA12877_ch_T0000116;gene_name=LINC02968;ID=exon:NA12877_ch_T0000116:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1381371	1444470	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=NA12877_ch_T0000116;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000116;transcript_name=NA12877_ch_T0000116;gene_name=LINC02968;ID=intron:NA12877_ch_T0000116:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444471	1444558	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=NA12877_ch_T0000116;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000116;transcript_name=NA12877_ch_T0000116;gene_name=LINC02968;ID=exon:NA12877_ch_T0000116:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1444559	1444723	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=NA12877_ch_T0000116;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000116;transcript_name=NA12877_ch_T0000116;gene_name=LINC02968;ID=intron:NA12877_ch_T0000116:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444724	1444937	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=NA12877_ch_T0000116;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000116;transcript_name=NA12877_ch_T0000116;gene_name=LINC02968;ID=exon:NA12877_ch_T0000116:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1381141	1469715	1000	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=NA12877_ch_T0000117;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000117;gene_name=LINC02968;ID=NA12877_ch_T0000117;Name=LINC02968
NA12877_chrY	CAT	exon	1381141	1381370	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=NA12877_ch_T0000117;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000117;transcript_name=NA12877_ch_T0000117;gene_name=LINC02968;ID=exon:NA12877_ch_T0000117:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1381371	1444470	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=NA12877_ch_T0000117;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000117;transcript_name=NA12877_ch_T0000117;gene_name=LINC02968;ID=intron:NA12877_ch_T0000117:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444471	1444558	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=NA12877_ch_T0000117;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000117;transcript_name=NA12877_ch_T0000117;gene_name=LINC02968;ID=exon:NA12877_ch_T0000117:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1444559	1469524	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=NA12877_ch_T0000117;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000117;transcript_name=NA12877_ch_T0000117;gene_name=LINC02968;ID=intron:NA12877_ch_T0000117:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1469525	1469715	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=NA12877_ch_T0000117;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000117;transcript_name=NA12877_ch_T0000117;gene_name=LINC02968;ID=exon:NA12877_ch_T0000117:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1381164	1474168	1000	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=NA12877_ch_T0000118;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000118;gene_name=LINC02968;ID=NA12877_ch_T0000118;Name=LINC02968
NA12877_chrY	CAT	exon	1381164	1381370	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=NA12877_ch_T0000118;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000118;transcript_name=NA12877_ch_T0000118;gene_name=LINC02968;ID=exon:NA12877_ch_T0000118:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1381371	1444470	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=NA12877_ch_T0000118;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000118;transcript_name=NA12877_ch_T0000118;gene_name=LINC02968;ID=intron:NA12877_ch_T0000118:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444471	1444558	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=NA12877_ch_T0000118;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000118;transcript_name=NA12877_ch_T0000118;gene_name=LINC02968;ID=exon:NA12877_ch_T0000118:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1444559	1469524	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=NA12877_ch_T0000118;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000118;transcript_name=NA12877_ch_T0000118;gene_name=LINC02968;ID=intron:NA12877_ch_T0000118:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1469525	1469584	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=NA12877_ch_T0000118;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000118;transcript_name=NA12877_ch_T0000118;gene_name=LINC02968;ID=exon:NA12877_ch_T0000118:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1469585	1473921	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=NA12877_ch_T0000118;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000118;transcript_name=NA12877_ch_T0000118;gene_name=LINC02968;ID=intron:NA12877_ch_T0000118:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1473922	1474168	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=NA12877_ch_T0000118;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000118;transcript_name=NA12877_ch_T0000118;gene_name=LINC02968;ID=exon:NA12877_ch_T0000118:3;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1381164	1449468	1000	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=NA12877_ch_T0000119;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000119;gene_name=LINC02968;ID=NA12877_ch_T0000119;Name=LINC02968
NA12877_chrY	CAT	exon	1381164	1381409	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=NA12877_ch_T0000119;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000119;transcript_name=NA12877_ch_T0000119;gene_name=LINC02968;ID=exon:NA12877_ch_T0000119:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1381410	1444470	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=NA12877_ch_T0000119;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000119;transcript_name=NA12877_ch_T0000119;gene_name=LINC02968;ID=intron:NA12877_ch_T0000119:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444471	1444558	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=NA12877_ch_T0000119;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000119;transcript_name=NA12877_ch_T0000119;gene_name=LINC02968;ID=exon:NA12877_ch_T0000119:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1444559	1449305	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=NA12877_ch_T0000119;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000119;transcript_name=NA12877_ch_T0000119;gene_name=LINC02968;ID=intron:NA12877_ch_T0000119:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1449306	1449468	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=NA12877_ch_T0000119;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000119;transcript_name=NA12877_ch_T0000119;gene_name=LINC02968;ID=exon:NA12877_ch_T0000119:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1381166	1469714	1000	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=NA12877_ch_T0000120;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000120;gene_name=LINC02968;ID=NA12877_ch_T0000120;Name=LINC02968
NA12877_chrY	CAT	exon	1381166	1381370	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=NA12877_ch_T0000120;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000120;transcript_name=NA12877_ch_T0000120;gene_name=LINC02968;ID=exon:NA12877_ch_T0000120:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1381371	1444470	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=NA12877_ch_T0000120;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000120;transcript_name=NA12877_ch_T0000120;gene_name=LINC02968;ID=intron:NA12877_ch_T0000120:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1444471	1444558	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=NA12877_ch_T0000120;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000120;transcript_name=NA12877_ch_T0000120;gene_name=LINC02968;ID=exon:NA12877_ch_T0000120:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1444559	1460164	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=NA12877_ch_T0000120;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000120;transcript_name=NA12877_ch_T0000120;gene_name=LINC02968;ID=intron:NA12877_ch_T0000120:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1460165	1460260	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=NA12877_ch_T0000120;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000120;transcript_name=NA12877_ch_T0000120;gene_name=LINC02968;ID=exon:NA12877_ch_T0000120:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1460261	1469524	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=NA12877_ch_T0000120;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000120;transcript_name=NA12877_ch_T0000120;gene_name=LINC02968;ID=intron:NA12877_ch_T0000120:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1469525	1469714	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=NA12877_ch_T0000120;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000120;transcript_name=NA12877_ch_T0000120;gene_name=LINC02968;ID=exon:NA12877_ch_T0000120:3;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1450998	1460222	1000	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=NA12877_ch_T0000121;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000121;gene_name=LINC02968;ID=NA12877_ch_T0000121;Name=LINC02968
NA12877_chrY	CAT	exon	1450998	1451137	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=NA12877_ch_T0000121;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000121;transcript_name=NA12877_ch_T0000121;gene_name=LINC02968;ID=exon:NA12877_ch_T0000121:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1451138	1452366	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=NA12877_ch_T0000121;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000121;transcript_name=NA12877_ch_T0000121;gene_name=LINC02968;ID=intron:NA12877_ch_T0000121:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1452367	1452613	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=NA12877_ch_T0000121;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000121;transcript_name=NA12877_ch_T0000121;gene_name=LINC02968;ID=exon:NA12877_ch_T0000121:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1452614	1460164	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=NA12877_ch_T0000121;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000121;transcript_name=NA12877_ch_T0000121;gene_name=LINC02968;ID=intron:NA12877_ch_T0000121:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1460165	1460222	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=NA12877_ch_T0000121;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000121;transcript_name=NA12877_ch_T0000121;gene_name=LINC02968;ID=exon:NA12877_ch_T0000121:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1452534	1481449	1000	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=NA12877_ch_T0000122;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000122;gene_name=LINC02968;ID=NA12877_ch_T0000122;Name=LINC02968
NA12877_chrY	CAT	exon	1452534	1452613	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=NA12877_ch_T0000122;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000122;transcript_name=NA12877_ch_T0000122;gene_name=LINC02968;ID=exon:NA12877_ch_T0000122:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1452614	1473921	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=NA12877_ch_T0000122;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000122;transcript_name=NA12877_ch_T0000122;gene_name=LINC02968;ID=intron:NA12877_ch_T0000122:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1473922	1474223	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=NA12877_ch_T0000122;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000122;transcript_name=NA12877_ch_T0000122;gene_name=LINC02968;ID=exon:NA12877_ch_T0000122:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1474224	1481195	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=NA12877_ch_T0000122;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000122;transcript_name=NA12877_ch_T0000122;gene_name=LINC02968;ID=intron:NA12877_ch_T0000122:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1481196	1481449	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=NA12877_ch_T0000122;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000122;transcript_name=NA12877_ch_T0000122;gene_name=LINC02968;ID=exon:NA12877_ch_T0000122:2;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1468894	1470061	1000	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.858;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=NA12877_ch_T0000123;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000123;gene_name=LINC02968;ID=NA12877_ch_T0000123;Name=LINC02968
NA12877_chrY	CAT	exon	1468894	1469059	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.858;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=NA12877_ch_T0000123;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000123;transcript_name=NA12877_ch_T0000123;gene_name=LINC02968;ID=exon:NA12877_ch_T0000123:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1469060	1469524	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.858;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=NA12877_ch_T0000123;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000123;transcript_name=NA12877_ch_T0000123;gene_name=LINC02968;ID=intron:NA12877_ch_T0000123:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1469525	1470061	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.858;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=NA12877_ch_T0000123;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000123;transcript_name=NA12877_ch_T0000123;gene_name=LINC02968;ID=exon:NA12877_ch_T0000123:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1469341	1474167	1000	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=299.692;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=NA12877_ch_T0000124;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_G0000028;transcript_name=NA12877_ch_T0000124;gene_name=LINC02968;ID=NA12877_ch_T0000124;Name=LINC02968
NA12877_chrY	CAT	exon	1469341	1469419	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=299.692;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=NA12877_ch_T0000124;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000124;transcript_name=NA12877_ch_T0000124;gene_name=LINC02968;ID=exon:NA12877_ch_T0000124:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1469420	1473921	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=299.692;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=NA12877_ch_T0000124;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000124;transcript_name=NA12877_ch_T0000124;gene_name=LINC02968;ID=intron:NA12877_ch_T0000124:0;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1473922	1474167	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=299.692;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=NA12877_ch_T0000124;gene_id=NA12877_ch_G0000028;Parent=NA12877_ch_T0000124;transcript_name=NA12877_ch_T0000124;gene_name=LINC02968;ID=exon:NA12877_ch_T0000124:1;Name=LINC02968;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1484609	1486045	.	+	.	source_gene_common_name=ENSG00000292330;source_gene=ENSG00000292330.1;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;gene_id=NA12877_ch_G0000029;gene_biotype=lncRNA;gene_name=ENSG00000292330;gene_sources=liftoff;ID=NA12877_ch_G0000029;Name=ENSG00000292330
NA12877_chrY	CAT	transcript	1484609	1486045	1000	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=NA12877_ch_T0000125;gene_id=NA12877_ch_G0000029;Parent=NA12877_ch_G0000029;transcript_name=NA12877_ch_T0000125;gene_name=ENSG00000292330;ID=NA12877_ch_T0000125;Name=ENSG00000292330
NA12877_chrY	CAT	exon	1484609	1484814	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=NA12877_ch_T0000125;gene_id=NA12877_ch_G0000029;Parent=NA12877_ch_T0000125;transcript_name=NA12877_ch_T0000125;gene_name=ENSG00000292330;ID=exon:NA12877_ch_T0000125:0;Name=ENSG00000292330;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1484815	1485701	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=NA12877_ch_T0000125;gene_id=NA12877_ch_G0000029;Parent=NA12877_ch_T0000125;transcript_name=NA12877_ch_T0000125;gene_name=ENSG00000292330;ID=intron:NA12877_ch_T0000125:0;Name=ENSG00000292330;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1485702	1486045	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=NA12877_ch_T0000125;gene_id=NA12877_ch_G0000029;Parent=NA12877_ch_T0000125;transcript_name=NA12877_ch_T0000125;gene_name=ENSG00000292330;ID=exon:NA12877_ch_T0000125:1;Name=ENSG00000292330;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1600584	1612061	.	+	.	source_gene_common_name=ENSG00000310547;source_gene=ENSG00000310547.1;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;gene_id=NA12877_ch_G0000030;gene_biotype=lncRNA;gene_name=ENSG00000310547;gene_sources=liftoff;ID=NA12877_ch_G0000030;Name=ENSG00000310547
NA12877_chrY	CAT	transcript	1600584	1612061	1000	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=NA12877_ch_T0000126;gene_id=NA12877_ch_G0000030;Parent=NA12877_ch_G0000030;transcript_name=NA12877_ch_T0000126;gene_name=ENSG00000310547;ID=NA12877_ch_T0000126;Name=ENSG00000310547
NA12877_chrY	CAT	exon	1600584	1600774	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=NA12877_ch_T0000126;gene_id=NA12877_ch_G0000030;Parent=NA12877_ch_T0000126;transcript_name=NA12877_ch_T0000126;gene_name=ENSG00000310547;ID=exon:NA12877_ch_T0000126:0;Name=ENSG00000310547;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1600775	1610830	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=NA12877_ch_T0000126;gene_id=NA12877_ch_G0000030;Parent=NA12877_ch_T0000126;transcript_name=NA12877_ch_T0000126;gene_name=ENSG00000310547;ID=intron:NA12877_ch_T0000126:0;Name=ENSG00000310547;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1610831	1610940	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=NA12877_ch_T0000126;gene_id=NA12877_ch_G0000030;Parent=NA12877_ch_T0000126;transcript_name=NA12877_ch_T0000126;gene_name=ENSG00000310547;ID=exon:NA12877_ch_T0000126:1;Name=ENSG00000310547;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1610941	1611390	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=NA12877_ch_T0000126;gene_id=NA12877_ch_G0000030;Parent=NA12877_ch_T0000126;transcript_name=NA12877_ch_T0000126;gene_name=ENSG00000310547;ID=intron:NA12877_ch_T0000126:1;Name=ENSG00000310547;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1611391	1612061	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=NA12877_ch_T0000126;gene_id=NA12877_ch_G0000030;Parent=NA12877_ch_T0000126;transcript_name=NA12877_ch_T0000126;gene_name=ENSG00000310547;ID=exon:NA12877_ch_T0000126:2;Name=ENSG00000310547;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1638762	1639808	.	-	.	source_gene_common_name=ENSG00000310544;source_gene=ENSG00000310544.1;gene_id=NA12877_ch_G0000031;gene_biotype=lncRNA;gene_name=ENSG00000310544;gene_sources=liftoff;ID=NA12877_ch_G0000031;Name=ENSG00000310544
NA12877_chrY	CAT	transcript	1638762	1639808	1000	-	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=NA12877_ch_T0000127;gene_id=NA12877_ch_G0000031;Parent=NA12877_ch_G0000031;transcript_name=NA12877_ch_T0000127;gene_name=ENSG00000310544;ID=NA12877_ch_T0000127;Name=ENSG00000310544
NA12877_chrY	CAT	exon	1638762	1639808	.	-	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=NA12877_ch_T0000127;gene_id=NA12877_ch_G0000031;Parent=NA12877_ch_T0000127;transcript_name=NA12877_ch_T0000127;gene_name=ENSG00000310544;ID=exon:NA12877_ch_T0000127:0;Name=ENSG00000310544;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1751924	2040065	.	-	.	source_gene_common_name=DHRSX;source_gene=ENSG00000292338.1;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;gene_id=NA12877_ch_G0000032;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff;ID=NA12877_ch_G0000032;Name=DHRSX
NA12877_chrY	CAT	transcript	1751924	2038236	100	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_G0000032;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=NA12877_ch_T0000128;Name=DHRSX
NA12877_chrY	CAT	exon	1751924	1753647	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=exon:NA12877_ch_T0000128:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1753459	1753647	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000128:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	1753459	1753461	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=stop_codon:NA12877_ch_T0000128;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1753648	1776139	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=intron:NA12877_ch_T0000128:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1776140	1776347	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=exon:NA12877_ch_T0000128:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1776140	1776347	.	-	1	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000128:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1776348	1799867	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=intron:NA12877_ch_T0000128:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1799868	1800075	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=exon:NA12877_ch_T0000128:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1799868	1800075	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000128:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1800076	1819849	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=intron:NA12877_ch_T0000128:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1819850	1819951	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=exon:NA12877_ch_T0000128:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1819850	1819951	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000128:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1819952	1946012	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=intron:NA12877_ch_T0000128:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1946013	1946081	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=exon:NA12877_ch_T0000128:4;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1946013	1946081	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000128:4;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1946082	1962467	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=intron:NA12877_ch_T0000128:4;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1962468	1962575	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=exon:NA12877_ch_T0000128:5;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1962468	1962575	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000128:5;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1962576	2038076	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=intron:NA12877_ch_T0000128:5;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2038077	2038236	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=exon:NA12877_ch_T0000128:6;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2038077	2038185	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000128:6;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2038183	2038185	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=NA12877_ch_T0000128;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000128;transcript_name=NA12877_ch_T0000128;gene_name=DHRSX;ID=start_codon:NA12877_ch_T0000128;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1776179	2038233	100	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_G0000032;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=NA12877_ch_T0000129;Name=DHRSX
NA12877_chrY	CAT	exon	1776179	1776347	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=exon:NA12877_ch_T0000129:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1776179	1776347	.	-	1	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000129:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1776348	1799867	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=intron:NA12877_ch_T0000129:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1799868	1800075	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=exon:NA12877_ch_T0000129:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1799868	1800075	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000129:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1800076	1819849	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=intron:NA12877_ch_T0000129:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1819850	1819951	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=exon:NA12877_ch_T0000129:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1819850	1819951	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000129:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1819952	1962467	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=intron:NA12877_ch_T0000129:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1962468	1962575	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=exon:NA12877_ch_T0000129:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1962468	1962575	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000129:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1962576	2038076	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=intron:NA12877_ch_T0000129:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2038077	2038233	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=exon:NA12877_ch_T0000129:4;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2038077	2038185	.	-	0	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000129:4;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2038183	2038185	.	-	0	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=NA12877_ch_T0000129;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000129;transcript_name=NA12877_ch_T0000129;gene_name=DHRSX;ID=start_codon:NA12877_ch_T0000129;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1794445	1800065	1000	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.476;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=NA12877_ch_T0000130;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_G0000032;transcript_name=NA12877_ch_T0000130;gene_name=DHRSX;ID=NA12877_ch_T0000130;Name=DHRSX
NA12877_chrY	CAT	exon	1794445	1794818	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=NA12877_ch_T0000130;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000130;transcript_name=NA12877_ch_T0000130;gene_name=DHRSX;ID=exon:NA12877_ch_T0000130:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1794819	1799867	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=NA12877_ch_T0000130;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000130;transcript_name=NA12877_ch_T0000130;gene_name=DHRSX;ID=intron:NA12877_ch_T0000130:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1799868	1800065	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=NA12877_ch_T0000130;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000130;transcript_name=NA12877_ch_T0000130;gene_name=DHRSX;ID=exon:NA12877_ch_T0000130:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1799898	2037911	100	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_G0000032;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=NA12877_ch_T0000131;Name=DHRSX
NA12877_chrY	CAT	exon	1799898	1800075	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=exon:NA12877_ch_T0000131:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1799898	1800075	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000131:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1800076	1819849	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=intron:NA12877_ch_T0000131:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1819850	1819951	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=exon:NA12877_ch_T0000131:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1819850	1819951	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000131:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1819952	1946012	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=intron:NA12877_ch_T0000131:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1946013	1946081	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=exon:NA12877_ch_T0000131:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1946013	1946081	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000131:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1946082	1962467	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=intron:NA12877_ch_T0000131:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1962468	1962575	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=exon:NA12877_ch_T0000131:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1962468	1962483	.	-	0	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000131:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1962481	1962483	.	-	0	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=start_codon:NA12877_ch_T0000131;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1962576	2037570	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=intron:NA12877_ch_T0000131:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2037571	2037911	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=NA12877_ch_T0000131;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000131;transcript_name=NA12877_ch_T0000131;gene_name=DHRSX;ID=exon:NA12877_ch_T0000131:4;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1799982	2040065	1000	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=NA12877_ch_T0000132;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_G0000032;transcript_name=NA12877_ch_T0000132;gene_name=DHRSX;ID=NA12877_ch_T0000132;Name=DHRSX
NA12877_chrY	CAT	exon	1799982	1800075	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=NA12877_ch_T0000132;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000132;transcript_name=NA12877_ch_T0000132;gene_name=DHRSX;ID=exon:NA12877_ch_T0000132:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1800076	1819849	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=NA12877_ch_T0000132;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000132;transcript_name=NA12877_ch_T0000132;gene_name=DHRSX;ID=intron:NA12877_ch_T0000132:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1819850	1819951	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=NA12877_ch_T0000132;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000132;transcript_name=NA12877_ch_T0000132;gene_name=DHRSX;ID=exon:NA12877_ch_T0000132:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1819952	1929561	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=NA12877_ch_T0000132;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000132;transcript_name=NA12877_ch_T0000132;gene_name=DHRSX;ID=intron:NA12877_ch_T0000132:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1929562	1929682	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=NA12877_ch_T0000132;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000132;transcript_name=NA12877_ch_T0000132;gene_name=DHRSX;ID=exon:NA12877_ch_T0000132:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1929683	1946012	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=NA12877_ch_T0000132;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000132;transcript_name=NA12877_ch_T0000132;gene_name=DHRSX;ID=intron:NA12877_ch_T0000132:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1946013	1946081	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=NA12877_ch_T0000132;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000132;transcript_name=NA12877_ch_T0000132;gene_name=DHRSX;ID=exon:NA12877_ch_T0000132:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1946082	1962467	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=NA12877_ch_T0000132;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000132;transcript_name=NA12877_ch_T0000132;gene_name=DHRSX;ID=intron:NA12877_ch_T0000132:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1962468	1962575	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=NA12877_ch_T0000132;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000132;transcript_name=NA12877_ch_T0000132;gene_name=DHRSX;ID=exon:NA12877_ch_T0000132:4;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1962576	2040020	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=NA12877_ch_T0000132;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000132;transcript_name=NA12877_ch_T0000132;gene_name=DHRSX;ID=intron:NA12877_ch_T0000132:4;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2040021	2040065	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=NA12877_ch_T0000132;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000132;transcript_name=NA12877_ch_T0000132;gene_name=DHRSX;ID=exon:NA12877_ch_T0000132:5;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1819850	2037849	100	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=NA12877_ch_T0000133;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_G0000032;transcript_name=NA12877_ch_T0000133;gene_name=DHRSX;ID=NA12877_ch_T0000133;Name=DHRSX
NA12877_chrY	CAT	exon	1819850	1819951	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=NA12877_ch_T0000133;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000133;transcript_name=NA12877_ch_T0000133;gene_name=DHRSX;ID=exon:NA12877_ch_T0000133:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	1819850	1819922	.	-	0	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=NA12877_ch_T0000133;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000133;transcript_name=NA12877_ch_T0000133;gene_name=DHRSX;ID=CDS:NA12877_ch_T0000133:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	1819920	1819922	.	-	0	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=NA12877_ch_T0000133;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000133;transcript_name=NA12877_ch_T0000133;gene_name=DHRSX;ID=start_codon:NA12877_ch_T0000133;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1819952	1929561	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=NA12877_ch_T0000133;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000133;transcript_name=NA12877_ch_T0000133;gene_name=DHRSX;ID=intron:NA12877_ch_T0000133:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1929562	1929682	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=NA12877_ch_T0000133;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000133;transcript_name=NA12877_ch_T0000133;gene_name=DHRSX;ID=exon:NA12877_ch_T0000133:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1929683	1946012	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=NA12877_ch_T0000133;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000133;transcript_name=NA12877_ch_T0000133;gene_name=DHRSX;ID=intron:NA12877_ch_T0000133:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1946013	1946081	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=NA12877_ch_T0000133;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000133;transcript_name=NA12877_ch_T0000133;gene_name=DHRSX;ID=exon:NA12877_ch_T0000133:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1946082	1962467	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=NA12877_ch_T0000133;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000133;transcript_name=NA12877_ch_T0000133;gene_name=DHRSX;ID=intron:NA12877_ch_T0000133:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1962468	1962575	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=NA12877_ch_T0000133;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000133;transcript_name=NA12877_ch_T0000133;gene_name=DHRSX;ID=exon:NA12877_ch_T0000133:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1962576	2037570	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=NA12877_ch_T0000133;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000133;transcript_name=NA12877_ch_T0000133;gene_name=DHRSX;ID=intron:NA12877_ch_T0000133:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2037571	2037849	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=NA12877_ch_T0000133;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000133;transcript_name=NA12877_ch_T0000133;gene_name=DHRSX;ID=exon:NA12877_ch_T0000133:4;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	1874993	2038220	1000	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=299.592;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=NA12877_ch_T0000135;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_G0000032;transcript_name=NA12877_ch_T0000135;gene_name=DHRSX;ID=NA12877_ch_T0000135;Name=DHRSX
NA12877_chrY	CAT	exon	1874993	1875161	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=299.592;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=NA12877_ch_T0000135;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000135;transcript_name=NA12877_ch_T0000135;gene_name=DHRSX;ID=exon:NA12877_ch_T0000135:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1875162	1946012	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=299.592;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=NA12877_ch_T0000135;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000135;transcript_name=NA12877_ch_T0000135;gene_name=DHRSX;ID=intron:NA12877_ch_T0000135:0;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1946013	1946081	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=299.592;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=NA12877_ch_T0000135;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000135;transcript_name=NA12877_ch_T0000135;gene_name=DHRSX;ID=exon:NA12877_ch_T0000135:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1946082	1962467	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=299.592;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=NA12877_ch_T0000135;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000135;transcript_name=NA12877_ch_T0000135;gene_name=DHRSX;ID=intron:NA12877_ch_T0000135:1;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1962468	1962575	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=299.592;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=NA12877_ch_T0000135;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000135;transcript_name=NA12877_ch_T0000135;gene_name=DHRSX;ID=exon:NA12877_ch_T0000135:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1962576	2038076	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=299.592;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=NA12877_ch_T0000135;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000135;transcript_name=NA12877_ch_T0000135;gene_name=DHRSX;ID=intron:NA12877_ch_T0000135:2;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2038077	2038220	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=299.592;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=NA12877_ch_T0000135;gene_id=NA12877_ch_G0000032;Parent=NA12877_ch_T0000135;transcript_name=NA12877_ch_T0000135;gene_name=DHRSX;ID=exon:NA12877_ch_T0000135:3;Name=DHRSX;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1871449	1873567	.	-	.	source_gene_common_name=DHRSX-IT1;source_gene=ENSG00000292337.1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;gene_id=NA12877_ch_G0000033;gene_biotype=lncRNA;gene_name=DHRSX-IT1;gene_sources=liftoff;ID=NA12877_ch_G0000033;Name=DHRSX-IT1
NA12877_chrY	CAT	transcript	1871449	1873567	1000	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.23199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=NA12877_ch_T0000134;gene_id=NA12877_ch_G0000033;Parent=NA12877_ch_G0000033;transcript_name=NA12877_ch_T0000134;gene_name=DHRSX-IT1;ID=NA12877_ch_T0000134;Name=DHRSX-IT1
NA12877_chrY	CAT	exon	1871449	1872073	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.23199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=NA12877_ch_T0000134;gene_id=NA12877_ch_G0000033;Parent=NA12877_ch_T0000134;transcript_name=NA12877_ch_T0000134;gene_name=DHRSX-IT1;ID=exon:NA12877_ch_T0000134:0;Name=DHRSX-IT1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	1872074	1873541	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.23199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=NA12877_ch_T0000134;gene_id=NA12877_ch_G0000033;Parent=NA12877_ch_T0000134;transcript_name=NA12877_ch_T0000134;gene_name=DHRSX-IT1;ID=intron:NA12877_ch_T0000134:0;Name=DHRSX-IT1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	1873542	1873567	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.23199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=NA12877_ch_T0000134;gene_id=NA12877_ch_G0000033;Parent=NA12877_ch_T0000134;transcript_name=NA12877_ch_T0000134;gene_name=DHRSX-IT1;ID=exon:NA12877_ch_T0000134:1;Name=DHRSX-IT1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	1910195	1910306	.	-	.	source_gene_common_name=ENSG00000310552;source_gene=ENSG00000310552.1;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;gene_id=NA12877_ch_G0000034;gene_biotype=lncRNA;gene_name=ENSG00000310552;gene_sources=liftoff;ID=NA12877_ch_G0000034;Name=ENSG00000310552
NA12877_chrY	CAT	transcript	1910195	1910306	1000	-	.	source_transcript=ENST00000850728.1;source_transcript_name=ENST00000850728;source_gene=ENSG00000310552.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310552.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850728.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310552;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;transcript_id=NA12877_ch_T0000136;gene_id=NA12877_ch_G0000034;Parent=NA12877_ch_G0000034;transcript_name=NA12877_ch_T0000136;gene_name=ENSG00000310552;ID=NA12877_ch_T0000136;Name=ENSG00000310552
NA12877_chrY	CAT	exon	1910195	1910306	.	-	.	source_transcript=ENST00000850728.1;source_transcript_name=ENST00000850728;source_gene=ENSG00000310552.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310552.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850728.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310552;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;transcript_id=NA12877_ch_T0000136;gene_id=NA12877_ch_G0000034;Parent=NA12877_ch_T0000136;transcript_name=NA12877_ch_T0000136;gene_name=ENSG00000310552;ID=exon:NA12877_ch_T0000136:0;Name=ENSG00000310552;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2023669	2038236	.	-	.	source_gene_common_name=ZBED1;source_gene=ENSG00000292345.1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;gene_id=NA12877_ch_G0000035;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff;ID=NA12877_ch_G0000035;Name=ZBED1
NA12877_chrY	CAT	transcript	2023669	2038227	100	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=NA12877_ch_T0000137;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_G0000035;transcript_name=NA12877_ch_T0000137;gene_name=ZBED1;ID=NA12877_ch_T0000137;Name=ZBED1
NA12877_chrY	CAT	exon	2023669	2028027	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=NA12877_ch_T0000137;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000137;transcript_name=NA12877_ch_T0000137;gene_name=ZBED1;ID=exon:NA12877_ch_T0000137:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2025890	2027974	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=NA12877_ch_T0000137;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000137;transcript_name=NA12877_ch_T0000137;gene_name=ZBED1;ID=CDS:NA12877_ch_T0000137:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2025890	2025892	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=NA12877_ch_T0000137;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000137;transcript_name=NA12877_ch_T0000137;gene_name=ZBED1;ID=stop_codon:NA12877_ch_T0000137;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2027972	2027974	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=NA12877_ch_T0000137;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000137;transcript_name=NA12877_ch_T0000137;gene_name=ZBED1;ID=start_codon:NA12877_ch_T0000137;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2028028	2038076	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=NA12877_ch_T0000137;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000137;transcript_name=NA12877_ch_T0000137;gene_name=ZBED1;ID=intron:NA12877_ch_T0000137:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2038077	2038227	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=NA12877_ch_T0000137;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000137;transcript_name=NA12877_ch_T0000137;gene_name=ZBED1;ID=exon:NA12877_ch_T0000137:1;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2023669	2038227	100	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=NA12877_ch_T0000138;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_G0000035;transcript_name=NA12877_ch_T0000138;gene_name=ZBED1;ID=NA12877_ch_T0000138;Name=ZBED1
NA12877_chrY	CAT	exon	2023669	2028024	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=NA12877_ch_T0000138;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000138;transcript_name=NA12877_ch_T0000138;gene_name=ZBED1;ID=exon:NA12877_ch_T0000138:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2025890	2027974	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=NA12877_ch_T0000138;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000138;transcript_name=NA12877_ch_T0000138;gene_name=ZBED1;ID=CDS:NA12877_ch_T0000138:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2025890	2025892	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=NA12877_ch_T0000138;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000138;transcript_name=NA12877_ch_T0000138;gene_name=ZBED1;ID=stop_codon:NA12877_ch_T0000138;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2027972	2027974	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=NA12877_ch_T0000138;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000138;transcript_name=NA12877_ch_T0000138;gene_name=ZBED1;ID=start_codon:NA12877_ch_T0000138;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2028025	2038076	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=NA12877_ch_T0000138;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000138;transcript_name=NA12877_ch_T0000138;gene_name=ZBED1;ID=intron:NA12877_ch_T0000138:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2038077	2038227	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=NA12877_ch_T0000138;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000138;transcript_name=NA12877_ch_T0000138;gene_name=ZBED1;ID=exon:NA12877_ch_T0000138:1;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2023690	2038236	100	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=NA12877_ch_T0000139;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_G0000035;transcript_name=NA12877_ch_T0000139;gene_name=ZBED1;ID=NA12877_ch_T0000139;Name=ZBED1
NA12877_chrY	CAT	exon	2023690	2028027	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=NA12877_ch_T0000139;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000139;transcript_name=NA12877_ch_T0000139;gene_name=ZBED1;ID=exon:NA12877_ch_T0000139:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2025890	2027974	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=NA12877_ch_T0000139;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000139;transcript_name=NA12877_ch_T0000139;gene_name=ZBED1;ID=CDS:NA12877_ch_T0000139:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2025890	2025892	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=NA12877_ch_T0000139;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000139;transcript_name=NA12877_ch_T0000139;gene_name=ZBED1;ID=stop_codon:NA12877_ch_T0000139;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2027972	2027974	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=NA12877_ch_T0000139;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000139;transcript_name=NA12877_ch_T0000139;gene_name=ZBED1;ID=start_codon:NA12877_ch_T0000139;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2028028	2038076	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=NA12877_ch_T0000139;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000139;transcript_name=NA12877_ch_T0000139;gene_name=ZBED1;ID=intron:NA12877_ch_T0000139:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2038077	2038236	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=NA12877_ch_T0000139;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000139;transcript_name=NA12877_ch_T0000139;gene_name=ZBED1;ID=exon:NA12877_ch_T0000139:1;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2024237	2026226	1000	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.779;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=NA12877_ch_T0000140;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_G0000035;transcript_name=NA12877_ch_T0000140;gene_name=ZBED1;ID=NA12877_ch_T0000140;Name=ZBED1
NA12877_chrY	CAT	exon	2024237	2024957	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=NA12877_ch_T0000140;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000140;transcript_name=NA12877_ch_T0000140;gene_name=ZBED1;ID=exon:NA12877_ch_T0000140:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2024958	2026042	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=NA12877_ch_T0000140;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000140;transcript_name=NA12877_ch_T0000140;gene_name=ZBED1;ID=intron:NA12877_ch_T0000140:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2026043	2026226	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=NA12877_ch_T0000140;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000140;transcript_name=NA12877_ch_T0000140;gene_name=ZBED1;ID=exon:NA12877_ch_T0000140:1;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2025441	2037815	100	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=NA12877_ch_T0000141;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_G0000035;transcript_name=NA12877_ch_T0000141;gene_name=ZBED1;ID=NA12877_ch_T0000141;Name=ZBED1
NA12877_chrY	CAT	exon	2025441	2028027	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=NA12877_ch_T0000141;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000141;transcript_name=NA12877_ch_T0000141;gene_name=ZBED1;ID=exon:NA12877_ch_T0000141:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2025890	2027974	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=NA12877_ch_T0000141;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000141;transcript_name=NA12877_ch_T0000141;gene_name=ZBED1;ID=CDS:NA12877_ch_T0000141:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2025890	2025892	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=NA12877_ch_T0000141;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000141;transcript_name=NA12877_ch_T0000141;gene_name=ZBED1;ID=stop_codon:NA12877_ch_T0000141;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2027972	2027974	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=NA12877_ch_T0000141;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000141;transcript_name=NA12877_ch_T0000141;gene_name=ZBED1;ID=start_codon:NA12877_ch_T0000141;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2028028	2037570	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=NA12877_ch_T0000141;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000141;transcript_name=NA12877_ch_T0000141;gene_name=ZBED1;ID=intron:NA12877_ch_T0000141:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2037571	2037815	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=NA12877_ch_T0000141;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000141;transcript_name=NA12877_ch_T0000141;gene_name=ZBED1;ID=exon:NA12877_ch_T0000141:1;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2027160	2038155	100	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=NA12877_ch_T0000142;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_G0000035;transcript_name=NA12877_ch_T0000142;gene_name=ZBED1;ID=NA12877_ch_T0000142;Name=ZBED1
NA12877_chrY	CAT	exon	2027160	2028027	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=NA12877_ch_T0000142;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000142;transcript_name=NA12877_ch_T0000142;gene_name=ZBED1;ID=exon:NA12877_ch_T0000142:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2027160	2027974	.	-	0	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=NA12877_ch_T0000142;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000142;transcript_name=NA12877_ch_T0000142;gene_name=ZBED1;ID=CDS:NA12877_ch_T0000142:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2027972	2027974	.	-	0	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=NA12877_ch_T0000142;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000142;transcript_name=NA12877_ch_T0000142;gene_name=ZBED1;ID=start_codon:NA12877_ch_T0000142;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2028028	2038076	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=NA12877_ch_T0000142;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000142;transcript_name=NA12877_ch_T0000142;gene_name=ZBED1;ID=intron:NA12877_ch_T0000142:0;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2038077	2038155	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=NA12877_ch_T0000142;gene_id=NA12877_ch_G0000035;Parent=NA12877_ch_T0000142;transcript_name=NA12877_ch_T0000142;gene_name=ZBED1;ID=exon:NA12877_ch_T0000142:1;Name=ZBED1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2037505	2040373	.	+	.	source_gene_common_name=ENSG00000310551;source_gene=ENSG00000310551.1;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;gene_id=NA12877_ch_G0000036;gene_biotype=lncRNA;gene_name=ENSG00000310551;gene_sources=liftoff;ID=NA12877_ch_G0000036;Name=ENSG00000310551
NA12877_chrY	CAT	transcript	2037505	2040373	1000	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=299.194;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=NA12877_ch_T0000143;gene_id=NA12877_ch_G0000036;Parent=NA12877_ch_G0000036;transcript_name=NA12877_ch_T0000143;gene_name=ENSG00000310551;ID=NA12877_ch_T0000143;Name=ENSG00000310551
NA12877_chrY	CAT	exon	2037505	2037576	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=299.194;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=NA12877_ch_T0000143;gene_id=NA12877_ch_G0000036;Parent=NA12877_ch_T0000143;transcript_name=NA12877_ch_T0000143;gene_name=ENSG00000310551;ID=exon:NA12877_ch_T0000143:0;Name=ENSG00000310551;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2037577	2040073	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=299.194;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=NA12877_ch_T0000143;gene_id=NA12877_ch_G0000036;Parent=NA12877_ch_T0000143;transcript_name=NA12877_ch_T0000143;gene_name=ENSG00000310551;ID=intron:NA12877_ch_T0000143:0;Name=ENSG00000310551;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2040074	2040373	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=299.194;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=NA12877_ch_T0000143;gene_id=NA12877_ch_G0000036;Parent=NA12877_ch_T0000143;transcript_name=NA12877_ch_T0000143;gene_name=ENSG00000310551;ID=exon:NA12877_ch_T0000143:1;Name=ENSG00000310551;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2102087	2145718	.	-	.	source_gene_common_name=LINC03112;source_gene=ENSG00000292360.2;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;gene_id=NA12877_ch_G0000037;gene_biotype=lncRNA;gene_name=LINC03112;gene_sources=liftoff;ID=NA12877_ch_G0000037;Name=LINC03112
NA12877_chrY	CAT	transcript	2102087	2145718	1000	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=NA12877_ch_T0000144;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000144;gene_name=LINC03112;ID=NA12877_ch_T0000144;Name=LINC03112
NA12877_chrY	CAT	exon	2102087	2103357	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=NA12877_ch_T0000144;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000144;transcript_name=NA12877_ch_T0000144;gene_name=LINC03112;ID=exon:NA12877_ch_T0000144:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2145531	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=NA12877_ch_T0000144;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000144;transcript_name=NA12877_ch_T0000144;gene_name=LINC03112;ID=intron:NA12877_ch_T0000144:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145718	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=NA12877_ch_T0000144;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000144;transcript_name=NA12877_ch_T0000144;gene_name=LINC03112;ID=exon:NA12877_ch_T0000144:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102089	2145631	1000	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=NA12877_ch_T0000145;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000145;gene_name=LINC03112;ID=NA12877_ch_T0000145;Name=LINC03112
NA12877_chrY	CAT	exon	2102089	2103357	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=NA12877_ch_T0000145;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000145;transcript_name=NA12877_ch_T0000145;gene_name=LINC03112;ID=exon:NA12877_ch_T0000145:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=NA12877_ch_T0000145;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000145;transcript_name=NA12877_ch_T0000145;gene_name=LINC03112;ID=intron:NA12877_ch_T0000145:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106229	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=NA12877_ch_T0000145;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000145;transcript_name=NA12877_ch_T0000145;gene_name=LINC03112;ID=exon:NA12877_ch_T0000145:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106230	2145531	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=NA12877_ch_T0000145;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000145;transcript_name=NA12877_ch_T0000145;gene_name=LINC03112;ID=intron:NA12877_ch_T0000145:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145631	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=NA12877_ch_T0000145;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000145;transcript_name=NA12877_ch_T0000145;gene_name=LINC03112;ID=exon:NA12877_ch_T0000145:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102090	2145618	1000	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=NA12877_ch_T0000146;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000146;gene_name=LINC03112;ID=NA12877_ch_T0000146;Name=LINC03112
NA12877_chrY	CAT	exon	2102090	2103357	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=NA12877_ch_T0000146;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000146;transcript_name=NA12877_ch_T0000146;gene_name=LINC03112;ID=exon:NA12877_ch_T0000146:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=NA12877_ch_T0000146;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000146;transcript_name=NA12877_ch_T0000146;gene_name=LINC03112;ID=intron:NA12877_ch_T0000146:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106229	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=NA12877_ch_T0000146;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000146;transcript_name=NA12877_ch_T0000146;gene_name=LINC03112;ID=exon:NA12877_ch_T0000146:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106230	2141421	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=NA12877_ch_T0000146;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000146;transcript_name=NA12877_ch_T0000146;gene_name=LINC03112;ID=intron:NA12877_ch_T0000146:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2141422	2141703	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=NA12877_ch_T0000146;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000146;transcript_name=NA12877_ch_T0000146;gene_name=LINC03112;ID=exon:NA12877_ch_T0000146:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2141704	2145531	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=NA12877_ch_T0000146;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000146;transcript_name=NA12877_ch_T0000146;gene_name=LINC03112;ID=intron:NA12877_ch_T0000146:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145618	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=NA12877_ch_T0000146;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000146;transcript_name=NA12877_ch_T0000146;gene_name=LINC03112;ID=exon:NA12877_ch_T0000146:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102090	2145637	1000	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=NA12877_ch_T0000147;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000147;gene_name=LINC03112;ID=NA12877_ch_T0000147;Name=LINC03112
NA12877_chrY	CAT	exon	2102090	2103357	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=NA12877_ch_T0000147;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000147;transcript_name=NA12877_ch_T0000147;gene_name=LINC03112;ID=exon:NA12877_ch_T0000147:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=NA12877_ch_T0000147;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000147;transcript_name=NA12877_ch_T0000147;gene_name=LINC03112;ID=intron:NA12877_ch_T0000147:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106229	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=NA12877_ch_T0000147;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000147;transcript_name=NA12877_ch_T0000147;gene_name=LINC03112;ID=exon:NA12877_ch_T0000147:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106230	2110121	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=NA12877_ch_T0000147;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000147;transcript_name=NA12877_ch_T0000147;gene_name=LINC03112;ID=intron:NA12877_ch_T0000147:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2110122	2110315	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=NA12877_ch_T0000147;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000147;transcript_name=NA12877_ch_T0000147;gene_name=LINC03112;ID=exon:NA12877_ch_T0000147:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2110316	2145531	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=NA12877_ch_T0000147;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000147;transcript_name=NA12877_ch_T0000147;gene_name=LINC03112;ID=intron:NA12877_ch_T0000147:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145637	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=NA12877_ch_T0000147;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000147;transcript_name=NA12877_ch_T0000147;gene_name=LINC03112;ID=exon:NA12877_ch_T0000147:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102091	2145593	1000	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=NA12877_ch_T0000148;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000148;gene_name=LINC03112;ID=NA12877_ch_T0000148;Name=LINC03112
NA12877_chrY	CAT	exon	2102091	2102710	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=NA12877_ch_T0000148;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000148;transcript_name=NA12877_ch_T0000148;gene_name=LINC03112;ID=exon:NA12877_ch_T0000148:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2102711	2103149	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=NA12877_ch_T0000148;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000148;transcript_name=NA12877_ch_T0000148;gene_name=LINC03112;ID=intron:NA12877_ch_T0000148:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2103150	2103357	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=NA12877_ch_T0000148;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000148;transcript_name=NA12877_ch_T0000148;gene_name=LINC03112;ID=exon:NA12877_ch_T0000148:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=NA12877_ch_T0000148;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000148;transcript_name=NA12877_ch_T0000148;gene_name=LINC03112;ID=intron:NA12877_ch_T0000148:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106161	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=NA12877_ch_T0000148;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000148;transcript_name=NA12877_ch_T0000148;gene_name=LINC03112;ID=exon:NA12877_ch_T0000148:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106162	2145531	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=NA12877_ch_T0000148;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000148;transcript_name=NA12877_ch_T0000148;gene_name=LINC03112;ID=intron:NA12877_ch_T0000148:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145593	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=NA12877_ch_T0000148;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000148;transcript_name=NA12877_ch_T0000148;gene_name=LINC03112;ID=exon:NA12877_ch_T0000148:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102092	2145617	1000	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.868;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=NA12877_ch_T0000149;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000149;gene_name=LINC03112;ID=NA12877_ch_T0000149;Name=LINC03112
NA12877_chrY	CAT	exon	2102092	2103357	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=NA12877_ch_T0000149;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000149;transcript_name=NA12877_ch_T0000149;gene_name=LINC03112;ID=exon:NA12877_ch_T0000149:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2133711	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=NA12877_ch_T0000149;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000149;transcript_name=NA12877_ch_T0000149;gene_name=LINC03112;ID=intron:NA12877_ch_T0000149:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2133712	2133869	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=NA12877_ch_T0000149;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000149;transcript_name=NA12877_ch_T0000149;gene_name=LINC03112;ID=exon:NA12877_ch_T0000149:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2133870	2145531	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=NA12877_ch_T0000149;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000149;transcript_name=NA12877_ch_T0000149;gene_name=LINC03112;ID=intron:NA12877_ch_T0000149:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145617	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=NA12877_ch_T0000149;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000149;transcript_name=NA12877_ch_T0000149;gene_name=LINC03112;ID=exon:NA12877_ch_T0000149:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102092	2145594	1000	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=NA12877_ch_T0000150;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000150;gene_name=LINC03112;ID=NA12877_ch_T0000150;Name=LINC03112
NA12877_chrY	CAT	exon	2102092	2103357	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=NA12877_ch_T0000150;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000150;transcript_name=NA12877_ch_T0000150;gene_name=LINC03112;ID=exon:NA12877_ch_T0000150:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=NA12877_ch_T0000150;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000150;transcript_name=NA12877_ch_T0000150;gene_name=LINC03112;ID=intron:NA12877_ch_T0000150:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106161	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=NA12877_ch_T0000150;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000150;transcript_name=NA12877_ch_T0000150;gene_name=LINC03112;ID=exon:NA12877_ch_T0000150:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106162	2110138	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=NA12877_ch_T0000150;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000150;transcript_name=NA12877_ch_T0000150;gene_name=LINC03112;ID=intron:NA12877_ch_T0000150:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2110139	2110315	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=NA12877_ch_T0000150;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000150;transcript_name=NA12877_ch_T0000150;gene_name=LINC03112;ID=exon:NA12877_ch_T0000150:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2110316	2145531	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=NA12877_ch_T0000150;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000150;transcript_name=NA12877_ch_T0000150;gene_name=LINC03112;ID=intron:NA12877_ch_T0000150:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145594	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=NA12877_ch_T0000150;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000150;transcript_name=NA12877_ch_T0000150;gene_name=LINC03112;ID=exon:NA12877_ch_T0000150:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102092	2145622	1000	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.817;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=NA12877_ch_T0000151;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000151;gene_name=LINC03112;ID=NA12877_ch_T0000151;Name=LINC03112
NA12877_chrY	CAT	exon	2102092	2103357	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=NA12877_ch_T0000151;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000151;transcript_name=NA12877_ch_T0000151;gene_name=LINC03112;ID=exon:NA12877_ch_T0000151:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2141421	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=NA12877_ch_T0000151;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000151;transcript_name=NA12877_ch_T0000151;gene_name=LINC03112;ID=intron:NA12877_ch_T0000151:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2141422	2141703	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=NA12877_ch_T0000151;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000151;transcript_name=NA12877_ch_T0000151;gene_name=LINC03112;ID=exon:NA12877_ch_T0000151:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2141704	2145531	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=NA12877_ch_T0000151;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000151;transcript_name=NA12877_ch_T0000151;gene_name=LINC03112;ID=intron:NA12877_ch_T0000151:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145622	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=NA12877_ch_T0000151;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000151;transcript_name=NA12877_ch_T0000151;gene_name=LINC03112;ID=exon:NA12877_ch_T0000151:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102092	2145620	1000	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=NA12877_ch_T0000152;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000152;gene_name=LINC03112;ID=NA12877_ch_T0000152;Name=LINC03112
NA12877_chrY	CAT	exon	2102092	2103357	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=NA12877_ch_T0000152;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000152;transcript_name=NA12877_ch_T0000152;gene_name=LINC03112;ID=exon:NA12877_ch_T0000152:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=NA12877_ch_T0000152;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000152;transcript_name=NA12877_ch_T0000152;gene_name=LINC03112;ID=intron:NA12877_ch_T0000152:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106229	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=NA12877_ch_T0000152;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000152;transcript_name=NA12877_ch_T0000152;gene_name=LINC03112;ID=exon:NA12877_ch_T0000152:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106230	2110223	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=NA12877_ch_T0000152;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000152;transcript_name=NA12877_ch_T0000152;gene_name=LINC03112;ID=intron:NA12877_ch_T0000152:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2110224	2110315	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=NA12877_ch_T0000152;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000152;transcript_name=NA12877_ch_T0000152;gene_name=LINC03112;ID=exon:NA12877_ch_T0000152:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2110316	2145531	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=NA12877_ch_T0000152;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000152;transcript_name=NA12877_ch_T0000152;gene_name=LINC03112;ID=intron:NA12877_ch_T0000152:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145620	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=NA12877_ch_T0000152;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000152;transcript_name=NA12877_ch_T0000152;gene_name=LINC03112;ID=exon:NA12877_ch_T0000152:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102092	2145604	1000	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=NA12877_ch_T0000153;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000153;gene_name=LINC03112;ID=NA12877_ch_T0000153;Name=LINC03112
NA12877_chrY	CAT	exon	2102092	2102213	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=NA12877_ch_T0000153;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000153;transcript_name=NA12877_ch_T0000153;gene_name=LINC03112;ID=exon:NA12877_ch_T0000153:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2102214	2103149	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=NA12877_ch_T0000153;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000153;transcript_name=NA12877_ch_T0000153;gene_name=LINC03112;ID=intron:NA12877_ch_T0000153:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2103150	2103357	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=NA12877_ch_T0000153;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000153;transcript_name=NA12877_ch_T0000153;gene_name=LINC03112;ID=exon:NA12877_ch_T0000153:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2145531	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=NA12877_ch_T0000153;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000153;transcript_name=NA12877_ch_T0000153;gene_name=LINC03112;ID=intron:NA12877_ch_T0000153:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145604	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=NA12877_ch_T0000153;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000153;transcript_name=NA12877_ch_T0000153;gene_name=LINC03112;ID=exon:NA12877_ch_T0000153:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102092	2145587	1000	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=NA12877_ch_T0000154;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000154;gene_name=LINC03112;ID=NA12877_ch_T0000154;Name=LINC03112
NA12877_chrY	CAT	exon	2102092	2103357	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=NA12877_ch_T0000154;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000154;transcript_name=NA12877_ch_T0000154;gene_name=LINC03112;ID=exon:NA12877_ch_T0000154:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2145451	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=NA12877_ch_T0000154;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000154;transcript_name=NA12877_ch_T0000154;gene_name=LINC03112;ID=intron:NA12877_ch_T0000154:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145452	2145587	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=NA12877_ch_T0000154;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000154;transcript_name=NA12877_ch_T0000154;gene_name=LINC03112;ID=exon:NA12877_ch_T0000154:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102092	2120399	1000	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=NA12877_ch_T0000155;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000155;gene_name=LINC03112;ID=NA12877_ch_T0000155;Name=LINC03112
NA12877_chrY	CAT	exon	2102092	2103357	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=NA12877_ch_T0000155;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000155;transcript_name=NA12877_ch_T0000155;gene_name=LINC03112;ID=exon:NA12877_ch_T0000155:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2120261	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=NA12877_ch_T0000155;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000155;transcript_name=NA12877_ch_T0000155;gene_name=LINC03112;ID=intron:NA12877_ch_T0000155:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2120262	2120399	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=NA12877_ch_T0000155;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000155;transcript_name=NA12877_ch_T0000155;gene_name=LINC03112;ID=exon:NA12877_ch_T0000155:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102092	2145615	1000	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=NA12877_ch_T0000156;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000156;gene_name=LINC03112;ID=NA12877_ch_T0000156;Name=LINC03112
NA12877_chrY	CAT	exon	2102092	2103357	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=NA12877_ch_T0000156;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000156;transcript_name=NA12877_ch_T0000156;gene_name=LINC03112;ID=exon:NA12877_ch_T0000156:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=NA12877_ch_T0000156;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000156;transcript_name=NA12877_ch_T0000156;gene_name=LINC03112;ID=intron:NA12877_ch_T0000156:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106229	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=NA12877_ch_T0000156;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000156;transcript_name=NA12877_ch_T0000156;gene_name=LINC03112;ID=exon:NA12877_ch_T0000156:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106230	2110138	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=NA12877_ch_T0000156;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000156;transcript_name=NA12877_ch_T0000156;gene_name=LINC03112;ID=intron:NA12877_ch_T0000156:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2110139	2110315	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=NA12877_ch_T0000156;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000156;transcript_name=NA12877_ch_T0000156;gene_name=LINC03112;ID=exon:NA12877_ch_T0000156:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2110316	2145531	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=NA12877_ch_T0000156;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000156;transcript_name=NA12877_ch_T0000156;gene_name=LINC03112;ID=intron:NA12877_ch_T0000156:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145615	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=NA12877_ch_T0000156;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000156;transcript_name=NA12877_ch_T0000156;gene_name=LINC03112;ID=exon:NA12877_ch_T0000156:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102092	2145609	1000	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=NA12877_ch_T0000157;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000157;gene_name=LINC03112;ID=NA12877_ch_T0000157;Name=LINC03112
NA12877_chrY	CAT	exon	2102092	2103357	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=NA12877_ch_T0000157;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000157;transcript_name=NA12877_ch_T0000157;gene_name=LINC03112;ID=exon:NA12877_ch_T0000157:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=NA12877_ch_T0000157;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000157;transcript_name=NA12877_ch_T0000157;gene_name=LINC03112;ID=intron:NA12877_ch_T0000157:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106161	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=NA12877_ch_T0000157;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000157;transcript_name=NA12877_ch_T0000157;gene_name=LINC03112;ID=exon:NA12877_ch_T0000157:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106162	2110121	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=NA12877_ch_T0000157;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000157;transcript_name=NA12877_ch_T0000157;gene_name=LINC03112;ID=intron:NA12877_ch_T0000157:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2110122	2110315	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=NA12877_ch_T0000157;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000157;transcript_name=NA12877_ch_T0000157;gene_name=LINC03112;ID=exon:NA12877_ch_T0000157:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2110316	2145531	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=NA12877_ch_T0000157;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000157;transcript_name=NA12877_ch_T0000157;gene_name=LINC03112;ID=intron:NA12877_ch_T0000157:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145609	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=NA12877_ch_T0000157;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000157;transcript_name=NA12877_ch_T0000157;gene_name=LINC03112;ID=exon:NA12877_ch_T0000157:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102092	2145611	1000	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=NA12877_ch_T0000158;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000158;gene_name=LINC03112;ID=NA12877_ch_T0000158;Name=LINC03112
NA12877_chrY	CAT	exon	2102092	2103357	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=NA12877_ch_T0000158;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000158;transcript_name=NA12877_ch_T0000158;gene_name=LINC03112;ID=exon:NA12877_ch_T0000158:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=NA12877_ch_T0000158;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000158;transcript_name=NA12877_ch_T0000158;gene_name=LINC03112;ID=intron:NA12877_ch_T0000158:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106161	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=NA12877_ch_T0000158;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000158;transcript_name=NA12877_ch_T0000158;gene_name=LINC03112;ID=exon:NA12877_ch_T0000158:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106162	2145531	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=NA12877_ch_T0000158;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000158;transcript_name=NA12877_ch_T0000158;gene_name=LINC03112;ID=intron:NA12877_ch_T0000158:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145611	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=NA12877_ch_T0000158;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000158;transcript_name=NA12877_ch_T0000158;gene_name=LINC03112;ID=exon:NA12877_ch_T0000158:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102093	2145609	1000	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=NA12877_ch_T0000159;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000159;gene_name=LINC03112;ID=NA12877_ch_T0000159;Name=LINC03112
NA12877_chrY	CAT	exon	2102093	2103357	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=NA12877_ch_T0000159;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000159;transcript_name=NA12877_ch_T0000159;gene_name=LINC03112;ID=exon:NA12877_ch_T0000159:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2110138	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=NA12877_ch_T0000159;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000159;transcript_name=NA12877_ch_T0000159;gene_name=LINC03112;ID=intron:NA12877_ch_T0000159:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2110139	2110315	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=NA12877_ch_T0000159;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000159;transcript_name=NA12877_ch_T0000159;gene_name=LINC03112;ID=exon:NA12877_ch_T0000159:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2110316	2145531	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=NA12877_ch_T0000159;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000159;transcript_name=NA12877_ch_T0000159;gene_name=LINC03112;ID=intron:NA12877_ch_T0000159:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145609	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=NA12877_ch_T0000159;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000159;transcript_name=NA12877_ch_T0000159;gene_name=LINC03112;ID=exon:NA12877_ch_T0000159:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102094	2145618	1000	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.837;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=NA12877_ch_T0000160;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000160;gene_name=LINC03112;ID=NA12877_ch_T0000160;Name=LINC03112
NA12877_chrY	CAT	exon	2102094	2103357	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=NA12877_ch_T0000160;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000160;transcript_name=NA12877_ch_T0000160;gene_name=LINC03112;ID=exon:NA12877_ch_T0000160:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=NA12877_ch_T0000160;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000160;transcript_name=NA12877_ch_T0000160;gene_name=LINC03112;ID=intron:NA12877_ch_T0000160:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106229	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=NA12877_ch_T0000160;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000160;transcript_name=NA12877_ch_T0000160;gene_name=LINC03112;ID=exon:NA12877_ch_T0000160:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106230	2109183	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=NA12877_ch_T0000160;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000160;transcript_name=NA12877_ch_T0000160;gene_name=LINC03112;ID=intron:NA12877_ch_T0000160:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2109184	2109516	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=NA12877_ch_T0000160;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000160;transcript_name=NA12877_ch_T0000160;gene_name=LINC03112;ID=exon:NA12877_ch_T0000160:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2109517	2145531	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=NA12877_ch_T0000160;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000160;transcript_name=NA12877_ch_T0000160;gene_name=LINC03112;ID=intron:NA12877_ch_T0000160:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145618	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=NA12877_ch_T0000160;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000160;transcript_name=NA12877_ch_T0000160;gene_name=LINC03112;ID=exon:NA12877_ch_T0000160:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102094	2145618	1000	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.766;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=NA12877_ch_T0000161;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000161;gene_name=LINC03112;ID=NA12877_ch_T0000161;Name=LINC03112
NA12877_chrY	CAT	exon	2102094	2103357	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=NA12877_ch_T0000161;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000161;transcript_name=NA12877_ch_T0000161;gene_name=LINC03112;ID=exon:NA12877_ch_T0000161:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=NA12877_ch_T0000161;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000161;transcript_name=NA12877_ch_T0000161;gene_name=LINC03112;ID=intron:NA12877_ch_T0000161:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106229	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=NA12877_ch_T0000161;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000161;transcript_name=NA12877_ch_T0000161;gene_name=LINC03112;ID=exon:NA12877_ch_T0000161:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106230	2110947	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=NA12877_ch_T0000161;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000161;transcript_name=NA12877_ch_T0000161;gene_name=LINC03112;ID=intron:NA12877_ch_T0000161:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2110948	2111057	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=NA12877_ch_T0000161;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000161;transcript_name=NA12877_ch_T0000161;gene_name=LINC03112;ID=exon:NA12877_ch_T0000161:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2111058	2111205	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=NA12877_ch_T0000161;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000161;transcript_name=NA12877_ch_T0000161;gene_name=LINC03112;ID=intron:NA12877_ch_T0000161:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2111206	2111295	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=NA12877_ch_T0000161;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000161;transcript_name=NA12877_ch_T0000161;gene_name=LINC03112;ID=exon:NA12877_ch_T0000161:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2111296	2145531	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=NA12877_ch_T0000161;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000161;transcript_name=NA12877_ch_T0000161;gene_name=LINC03112;ID=intron:NA12877_ch_T0000161:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145618	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=NA12877_ch_T0000161;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000161;transcript_name=NA12877_ch_T0000161;gene_name=LINC03112;ID=exon:NA12877_ch_T0000161:4;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102094	2145610	1000	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=NA12877_ch_T0000162;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000162;gene_name=LINC03112;ID=NA12877_ch_T0000162;Name=LINC03112
NA12877_chrY	CAT	exon	2102094	2103357	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=NA12877_ch_T0000162;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000162;transcript_name=NA12877_ch_T0000162;gene_name=LINC03112;ID=exon:NA12877_ch_T0000162:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=NA12877_ch_T0000162;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000162;transcript_name=NA12877_ch_T0000162;gene_name=LINC03112;ID=intron:NA12877_ch_T0000162:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106229	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=NA12877_ch_T0000162;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000162;transcript_name=NA12877_ch_T0000162;gene_name=LINC03112;ID=exon:NA12877_ch_T0000162:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106230	2141421	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=NA12877_ch_T0000162;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000162;transcript_name=NA12877_ch_T0000162;gene_name=LINC03112;ID=intron:NA12877_ch_T0000162:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2141422	2141727	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=NA12877_ch_T0000162;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000162;transcript_name=NA12877_ch_T0000162;gene_name=LINC03112;ID=exon:NA12877_ch_T0000162:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2141728	2145531	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=NA12877_ch_T0000162;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000162;transcript_name=NA12877_ch_T0000162;gene_name=LINC03112;ID=intron:NA12877_ch_T0000162:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145610	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=NA12877_ch_T0000162;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000162;transcript_name=NA12877_ch_T0000162;gene_name=LINC03112;ID=exon:NA12877_ch_T0000162:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102094	2145597	1000	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=NA12877_ch_T0000163;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000163;gene_name=LINC03112;ID=NA12877_ch_T0000163;Name=LINC03112
NA12877_chrY	CAT	exon	2102094	2103357	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=NA12877_ch_T0000163;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000163;transcript_name=NA12877_ch_T0000163;gene_name=LINC03112;ID=exon:NA12877_ch_T0000163:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=NA12877_ch_T0000163;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000163;transcript_name=NA12877_ch_T0000163;gene_name=LINC03112;ID=intron:NA12877_ch_T0000163:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106229	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=NA12877_ch_T0000163;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000163;transcript_name=NA12877_ch_T0000163;gene_name=LINC03112;ID=exon:NA12877_ch_T0000163:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106230	2110121	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=NA12877_ch_T0000163;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000163;transcript_name=NA12877_ch_T0000163;gene_name=LINC03112;ID=intron:NA12877_ch_T0000163:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2110122	2110315	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=NA12877_ch_T0000163;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000163;transcript_name=NA12877_ch_T0000163;gene_name=LINC03112;ID=exon:NA12877_ch_T0000163:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2110316	2141421	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=NA12877_ch_T0000163;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000163;transcript_name=NA12877_ch_T0000163;gene_name=LINC03112;ID=intron:NA12877_ch_T0000163:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2141422	2141703	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=NA12877_ch_T0000163;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000163;transcript_name=NA12877_ch_T0000163;gene_name=LINC03112;ID=exon:NA12877_ch_T0000163:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2141704	2145531	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=NA12877_ch_T0000163;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000163;transcript_name=NA12877_ch_T0000163;gene_name=LINC03112;ID=intron:NA12877_ch_T0000163:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145597	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.745;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=NA12877_ch_T0000163;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000163;transcript_name=NA12877_ch_T0000163;gene_name=LINC03112;ID=exon:NA12877_ch_T0000163:4;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102094	2145594	1000	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.81600000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=NA12877_ch_T0000164;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000164;gene_name=LINC03112;ID=NA12877_ch_T0000164;Name=LINC03112
NA12877_chrY	CAT	exon	2102094	2103357	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=NA12877_ch_T0000164;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000164;transcript_name=NA12877_ch_T0000164;gene_name=LINC03112;ID=exon:NA12877_ch_T0000164:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2141421	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=NA12877_ch_T0000164;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000164;transcript_name=NA12877_ch_T0000164;gene_name=LINC03112;ID=intron:NA12877_ch_T0000164:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2141422	2141727	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=NA12877_ch_T0000164;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000164;transcript_name=NA12877_ch_T0000164;gene_name=LINC03112;ID=exon:NA12877_ch_T0000164:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2141728	2145531	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=NA12877_ch_T0000164;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000164;transcript_name=NA12877_ch_T0000164;gene_name=LINC03112;ID=intron:NA12877_ch_T0000164:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145594	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=NA12877_ch_T0000164;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000164;transcript_name=NA12877_ch_T0000164;gene_name=LINC03112;ID=exon:NA12877_ch_T0000164:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102094	2145593	1000	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=NA12877_ch_T0000165;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000165;gene_name=LINC03112;ID=NA12877_ch_T0000165;Name=LINC03112
NA12877_chrY	CAT	exon	2102094	2103357	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=NA12877_ch_T0000165;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000165;transcript_name=NA12877_ch_T0000165;gene_name=LINC03112;ID=exon:NA12877_ch_T0000165:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=NA12877_ch_T0000165;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000165;transcript_name=NA12877_ch_T0000165;gene_name=LINC03112;ID=intron:NA12877_ch_T0000165:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106161	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=NA12877_ch_T0000165;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000165;transcript_name=NA12877_ch_T0000165;gene_name=LINC03112;ID=exon:NA12877_ch_T0000165:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106162	2110223	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=NA12877_ch_T0000165;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000165;transcript_name=NA12877_ch_T0000165;gene_name=LINC03112;ID=intron:NA12877_ch_T0000165:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2110224	2110315	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=NA12877_ch_T0000165;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000165;transcript_name=NA12877_ch_T0000165;gene_name=LINC03112;ID=exon:NA12877_ch_T0000165:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2110316	2145531	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=NA12877_ch_T0000165;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000165;transcript_name=NA12877_ch_T0000165;gene_name=LINC03112;ID=intron:NA12877_ch_T0000165:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145593	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=NA12877_ch_T0000165;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000165;transcript_name=NA12877_ch_T0000165;gene_name=LINC03112;ID=exon:NA12877_ch_T0000165:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102094	2145590	1000	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=NA12877_ch_T0000166;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000166;gene_name=LINC03112;ID=NA12877_ch_T0000166;Name=LINC03112
NA12877_chrY	CAT	exon	2102094	2103357	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=NA12877_ch_T0000166;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000166;transcript_name=NA12877_ch_T0000166;gene_name=LINC03112;ID=exon:NA12877_ch_T0000166:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=NA12877_ch_T0000166;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000166;transcript_name=NA12877_ch_T0000166;gene_name=LINC03112;ID=intron:NA12877_ch_T0000166:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106229	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=NA12877_ch_T0000166;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000166;transcript_name=NA12877_ch_T0000166;gene_name=LINC03112;ID=exon:NA12877_ch_T0000166:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106230	2117929	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=NA12877_ch_T0000166;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000166;transcript_name=NA12877_ch_T0000166;gene_name=LINC03112;ID=intron:NA12877_ch_T0000166:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2117930	2118006	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=NA12877_ch_T0000166;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000166;transcript_name=NA12877_ch_T0000166;gene_name=LINC03112;ID=exon:NA12877_ch_T0000166:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2118007	2145531	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=NA12877_ch_T0000166;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000166;transcript_name=NA12877_ch_T0000166;gene_name=LINC03112;ID=intron:NA12877_ch_T0000166:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145590	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=NA12877_ch_T0000166;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000166;transcript_name=NA12877_ch_T0000166;gene_name=LINC03112;ID=exon:NA12877_ch_T0000166:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102094	2145587	1000	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=NA12877_ch_T0000167;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000167;gene_name=LINC03112;ID=NA12877_ch_T0000167;Name=LINC03112
NA12877_chrY	CAT	exon	2102094	2102213	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=NA12877_ch_T0000167;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000167;transcript_name=NA12877_ch_T0000167;gene_name=LINC03112;ID=exon:NA12877_ch_T0000167:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2102214	2103149	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=NA12877_ch_T0000167;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000167;transcript_name=NA12877_ch_T0000167;gene_name=LINC03112;ID=intron:NA12877_ch_T0000167:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2103150	2103357	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=NA12877_ch_T0000167;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000167;transcript_name=NA12877_ch_T0000167;gene_name=LINC03112;ID=exon:NA12877_ch_T0000167:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2145451	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=NA12877_ch_T0000167;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000167;transcript_name=NA12877_ch_T0000167;gene_name=LINC03112;ID=intron:NA12877_ch_T0000167:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145452	2145587	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=NA12877_ch_T0000167;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000167;transcript_name=NA12877_ch_T0000167;gene_name=LINC03112;ID=exon:NA12877_ch_T0000167:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102094	2145582	1000	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=NA12877_ch_T0000168;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000168;gene_name=LINC03112;ID=NA12877_ch_T0000168;Name=LINC03112
NA12877_chrY	CAT	exon	2102094	2103357	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=NA12877_ch_T0000168;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000168;transcript_name=NA12877_ch_T0000168;gene_name=LINC03112;ID=exon:NA12877_ch_T0000168:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=NA12877_ch_T0000168;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000168;transcript_name=NA12877_ch_T0000168;gene_name=LINC03112;ID=intron:NA12877_ch_T0000168:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106229	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=NA12877_ch_T0000168;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000168;transcript_name=NA12877_ch_T0000168;gene_name=LINC03112;ID=exon:NA12877_ch_T0000168:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106230	2110223	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=NA12877_ch_T0000168;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000168;transcript_name=NA12877_ch_T0000168;gene_name=LINC03112;ID=intron:NA12877_ch_T0000168:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2110224	2110315	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=NA12877_ch_T0000168;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000168;transcript_name=NA12877_ch_T0000168;gene_name=LINC03112;ID=exon:NA12877_ch_T0000168:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2110316	2141421	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=NA12877_ch_T0000168;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000168;transcript_name=NA12877_ch_T0000168;gene_name=LINC03112;ID=intron:NA12877_ch_T0000168:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2141422	2141703	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=NA12877_ch_T0000168;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000168;transcript_name=NA12877_ch_T0000168;gene_name=LINC03112;ID=exon:NA12877_ch_T0000168:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2141704	2145531	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=NA12877_ch_T0000168;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000168;transcript_name=NA12877_ch_T0000168;gene_name=LINC03112;ID=intron:NA12877_ch_T0000168:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145582	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.729;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=NA12877_ch_T0000168;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000168;transcript_name=NA12877_ch_T0000168;gene_name=LINC03112;ID=exon:NA12877_ch_T0000168:4;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102094	2120290	1000	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=NA12877_ch_T0000169;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000169;gene_name=LINC03112;ID=NA12877_ch_T0000169;Name=LINC03112
NA12877_chrY	CAT	exon	2102094	2103357	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=NA12877_ch_T0000169;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000169;transcript_name=NA12877_ch_T0000169;gene_name=LINC03112;ID=exon:NA12877_ch_T0000169:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=NA12877_ch_T0000169;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000169;transcript_name=NA12877_ch_T0000169;gene_name=LINC03112;ID=intron:NA12877_ch_T0000169:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106229	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=NA12877_ch_T0000169;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000169;transcript_name=NA12877_ch_T0000169;gene_name=LINC03112;ID=exon:NA12877_ch_T0000169:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106230	2120261	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=NA12877_ch_T0000169;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000169;transcript_name=NA12877_ch_T0000169;gene_name=LINC03112;ID=intron:NA12877_ch_T0000169:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2120262	2120290	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=NA12877_ch_T0000169;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000169;transcript_name=NA12877_ch_T0000169;gene_name=LINC03112;ID=exon:NA12877_ch_T0000169:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102094	2120022	1000	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=NA12877_ch_T0000170;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000170;gene_name=LINC03112;ID=NA12877_ch_T0000170;Name=LINC03112
NA12877_chrY	CAT	exon	2102094	2103357	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=NA12877_ch_T0000170;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000170;transcript_name=NA12877_ch_T0000170;gene_name=LINC03112;ID=exon:NA12877_ch_T0000170:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2119869	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=NA12877_ch_T0000170;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000170;transcript_name=NA12877_ch_T0000170;gene_name=LINC03112;ID=intron:NA12877_ch_T0000170:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2119870	2120022	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=NA12877_ch_T0000170;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000170;transcript_name=NA12877_ch_T0000170;gene_name=LINC03112;ID=exon:NA12877_ch_T0000170:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102097	2145609	1000	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=NA12877_ch_T0000171;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000171;gene_name=LINC03112;ID=NA12877_ch_T0000171;Name=LINC03112
NA12877_chrY	CAT	exon	2102097	2103357	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=NA12877_ch_T0000171;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000171;transcript_name=NA12877_ch_T0000171;gene_name=LINC03112;ID=exon:NA12877_ch_T0000171:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2106073	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=NA12877_ch_T0000171;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000171;transcript_name=NA12877_ch_T0000171;gene_name=LINC03112;ID=intron:NA12877_ch_T0000171:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2106074	2106161	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=NA12877_ch_T0000171;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000171;transcript_name=NA12877_ch_T0000171;gene_name=LINC03112;ID=exon:NA12877_ch_T0000171:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2106162	2141421	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=NA12877_ch_T0000171;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000171;transcript_name=NA12877_ch_T0000171;gene_name=LINC03112;ID=intron:NA12877_ch_T0000171:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2141422	2141703	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=NA12877_ch_T0000171;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000171;transcript_name=NA12877_ch_T0000171;gene_name=LINC03112;ID=exon:NA12877_ch_T0000171:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2141704	2145531	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=NA12877_ch_T0000171;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000171;transcript_name=NA12877_ch_T0000171;gene_name=LINC03112;ID=intron:NA12877_ch_T0000171:2;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145609	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=NA12877_ch_T0000171;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000171;transcript_name=NA12877_ch_T0000171;gene_name=LINC03112;ID=exon:NA12877_ch_T0000171:3;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2102097	2118123	1000	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=NA12877_ch_T0000172;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000172;gene_name=LINC03112;ID=NA12877_ch_T0000172;Name=LINC03112
NA12877_chrY	CAT	exon	2102097	2103357	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=NA12877_ch_T0000172;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000172;transcript_name=NA12877_ch_T0000172;gene_name=LINC03112;ID=exon:NA12877_ch_T0000172:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2103358	2117929	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=NA12877_ch_T0000172;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000172;transcript_name=NA12877_ch_T0000172;gene_name=LINC03112;ID=intron:NA12877_ch_T0000172:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2117930	2118123	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=NA12877_ch_T0000172;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000172;transcript_name=NA12877_ch_T0000172;gene_name=LINC03112;ID=exon:NA12877_ch_T0000172:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2141336	2145598	1000	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=299.53999999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=NA12877_ch_T0000177;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000177;gene_name=LINC03112;ID=NA12877_ch_T0000177;Name=LINC03112
NA12877_chrY	CAT	exon	2141336	2141703	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=299.53999999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=NA12877_ch_T0000177;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000177;transcript_name=NA12877_ch_T0000177;gene_name=LINC03112;ID=exon:NA12877_ch_T0000177:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2141704	2145531	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=299.53999999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=NA12877_ch_T0000177;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000177;transcript_name=NA12877_ch_T0000177;gene_name=LINC03112;ID=intron:NA12877_ch_T0000177:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2145532	2145598	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=299.53999999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=NA12877_ch_T0000177;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000177;transcript_name=NA12877_ch_T0000177;gene_name=LINC03112;ID=exon:NA12877_ch_T0000177:1;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2144877	2145609	1000	-	.	source_transcript=ENST00000850817.1;source_transcript_name=LINC03112-256;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850817.1;transcript_score=199.864;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850817.1,ENST00000850817.1;transcript_id=NA12877_ch_T0000179;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_G0000037;transcript_name=NA12877_ch_T0000179;gene_name=LINC03112;ID=NA12877_ch_T0000179;Name=LINC03112
NA12877_chrY	CAT	exon	2144877	2145609	.	-	.	source_transcript=ENST00000850817.1;source_transcript_name=LINC03112-256;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850817.1;transcript_score=199.864;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850817.1,ENST00000850817.1;transcript_id=NA12877_ch_T0000179;gene_id=NA12877_ch_G0000037;Parent=NA12877_ch_T0000179;transcript_name=NA12877_ch_T0000179;gene_name=LINC03112;ID=exon:NA12877_ch_T0000179:0;Name=LINC03112;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2120082	2142453	.	+	.	source_gene_common_name=ENSG00000310557;source_gene=ENSG00000310557.1;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;gene_id=NA12877_ch_G0000038;gene_biotype=lncRNA;gene_name=ENSG00000310557;gene_sources=liftoff;ID=NA12877_ch_G0000038;Name=ENSG00000310557
NA12877_chrY	CAT	transcript	2120082	2142453	1000	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=NA12877_ch_T0000173;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_G0000038;transcript_name=NA12877_ch_T0000173;gene_name=ENSG00000310557;ID=NA12877_ch_T0000173;Name=ENSG00000310557
NA12877_chrY	CAT	exon	2120082	2120273	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=NA12877_ch_T0000173;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000173;transcript_name=NA12877_ch_T0000173;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000173:0;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2120274	2129755	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=NA12877_ch_T0000173;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000173;transcript_name=NA12877_ch_T0000173;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000173:0;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2129756	2129830	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=NA12877_ch_T0000173;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000173;transcript_name=NA12877_ch_T0000173;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000173:1;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2129831	2133308	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=NA12877_ch_T0000173;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000173;transcript_name=NA12877_ch_T0000173;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000173:1;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2133309	2133471	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=NA12877_ch_T0000173;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000173;transcript_name=NA12877_ch_T0000173;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000173:2;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2133472	2142245	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=NA12877_ch_T0000173;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000173;transcript_name=NA12877_ch_T0000173;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000173:2;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2142246	2142453	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=NA12877_ch_T0000173;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000173;transcript_name=NA12877_ch_T0000173;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000173:3;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2120083	2139678	1000	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=NA12877_ch_T0000174;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_G0000038;transcript_name=NA12877_ch_T0000174;gene_name=ENSG00000310557;ID=NA12877_ch_T0000174;Name=ENSG00000310557
NA12877_chrY	CAT	exon	2120083	2120273	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=NA12877_ch_T0000174;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000174;transcript_name=NA12877_ch_T0000174;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000174:0;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2120274	2129755	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=NA12877_ch_T0000174;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000174;transcript_name=NA12877_ch_T0000174;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000174:0;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2129756	2129830	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=NA12877_ch_T0000174;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000174;transcript_name=NA12877_ch_T0000174;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000174:1;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2129831	2133308	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=NA12877_ch_T0000174;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000174;transcript_name=NA12877_ch_T0000174;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000174:1;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2133309	2133471	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=NA12877_ch_T0000174;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000174;transcript_name=NA12877_ch_T0000174;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000174:2;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2133472	2139339	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=NA12877_ch_T0000174;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000174;transcript_name=NA12877_ch_T0000174;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000174:2;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2139340	2139678	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=NA12877_ch_T0000174;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000174;transcript_name=NA12877_ch_T0000174;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000174:3;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2120085	2142452	1000	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=NA12877_ch_T0000175;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_G0000038;transcript_name=NA12877_ch_T0000175;gene_name=ENSG00000310557;ID=NA12877_ch_T0000175;Name=ENSG00000310557
NA12877_chrY	CAT	exon	2120085	2120273	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=NA12877_ch_T0000175;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000175;transcript_name=NA12877_ch_T0000175;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000175:0;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2120274	2129280	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=NA12877_ch_T0000175;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000175;transcript_name=NA12877_ch_T0000175;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000175:0;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2129281	2129407	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=NA12877_ch_T0000175;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000175;transcript_name=NA12877_ch_T0000175;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000175:1;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2129408	2129707	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=NA12877_ch_T0000175;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000175;transcript_name=NA12877_ch_T0000175;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000175:1;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2129708	2129830	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=NA12877_ch_T0000175;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000175;transcript_name=NA12877_ch_T0000175;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000175:2;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2129831	2133308	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=NA12877_ch_T0000175;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000175;transcript_name=NA12877_ch_T0000175;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000175:2;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2133309	2133471	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=NA12877_ch_T0000175;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000175;transcript_name=NA12877_ch_T0000175;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000175:3;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2133472	2142245	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=NA12877_ch_T0000175;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000175;transcript_name=NA12877_ch_T0000175;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000175:3;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2142246	2142452	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=NA12877_ch_T0000175;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000175;transcript_name=NA12877_ch_T0000175;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000175:4;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2120171	2139660	1000	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=NA12877_ch_T0000176;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_G0000038;transcript_name=NA12877_ch_T0000176;gene_name=ENSG00000310557;ID=NA12877_ch_T0000176;Name=ENSG00000310557
NA12877_chrY	CAT	exon	2120171	2120273	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=NA12877_ch_T0000176;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000176;transcript_name=NA12877_ch_T0000176;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000176:0;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2120274	2129280	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=NA12877_ch_T0000176;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000176;transcript_name=NA12877_ch_T0000176;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000176:0;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2129281	2129407	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=NA12877_ch_T0000176;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000176;transcript_name=NA12877_ch_T0000176;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000176:1;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2129408	2129755	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=NA12877_ch_T0000176;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000176;transcript_name=NA12877_ch_T0000176;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000176:1;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2129756	2129830	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=NA12877_ch_T0000176;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000176;transcript_name=NA12877_ch_T0000176;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000176:2;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2129831	2133308	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=NA12877_ch_T0000176;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000176;transcript_name=NA12877_ch_T0000176;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000176:2;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2133309	2133471	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=NA12877_ch_T0000176;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000176;transcript_name=NA12877_ch_T0000176;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000176:3;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2133472	2139339	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=NA12877_ch_T0000176;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000176;transcript_name=NA12877_ch_T0000176;gene_name=ENSG00000310557;ID=intron:NA12877_ch_T0000176:3;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2139340	2139660	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=NA12877_ch_T0000176;gene_id=NA12877_ch_G0000038;Parent=NA12877_ch_T0000176;transcript_name=NA12877_ch_T0000176;gene_name=ENSG00000310557;ID=exon:NA12877_ch_T0000176:4;Name=ENSG00000310557;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2144832	2202834	.	+	.	source_gene_common_name=CD99P1;source_gene=ENSG00000292362.2;gene_id=NA12877_ch_G0000039;gene_biotype=lncRNA;gene_name=CD99P1;gene_sources=liftoff;ID=NA12877_ch_G0000039;Name=CD99P1
NA12877_chrY	CAT	transcript	2144832	2175006	1000	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=NA12877_ch_T0000178;Name=CD99P1
NA12877_chrY	CAT	exon	2144832	2144901	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=exon:NA12877_ch_T0000178:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2144902	2147395	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=intron:NA12877_ch_T0000178:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=exon:NA12877_ch_T0000178:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=intron:NA12877_ch_T0000178:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=exon:NA12877_ch_T0000178:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=intron:NA12877_ch_T0000178:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=exon:NA12877_ch_T0000178:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=intron:NA12877_ch_T0000178:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=exon:NA12877_ch_T0000178:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=intron:NA12877_ch_T0000178:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=exon:NA12877_ch_T0000178:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=intron:NA12877_ch_T0000178:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=exon:NA12877_ch_T0000178:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=intron:NA12877_ch_T0000178:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=exon:NA12877_ch_T0000178:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=intron:NA12877_ch_T0000178:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175006	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000178;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000178;transcript_name=NA12877_ch_T0000178;gene_name=CD99P1;ID=exon:NA12877_ch_T0000178:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145272	2175012	1000	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=NA12877_ch_T0000180;Name=CD99P1
NA12877_chrY	CAT	exon	2145272	2145394	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=exon:NA12877_ch_T0000180:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145395	2147395	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=intron:NA12877_ch_T0000180:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=exon:NA12877_ch_T0000180:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=intron:NA12877_ch_T0000180:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=exon:NA12877_ch_T0000180:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=intron:NA12877_ch_T0000180:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=exon:NA12877_ch_T0000180:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=intron:NA12877_ch_T0000180:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=exon:NA12877_ch_T0000180:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=intron:NA12877_ch_T0000180:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=exon:NA12877_ch_T0000180:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=intron:NA12877_ch_T0000180:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=exon:NA12877_ch_T0000180:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=intron:NA12877_ch_T0000180:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=exon:NA12877_ch_T0000180:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=intron:NA12877_ch_T0000180:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175012	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000180;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000180;transcript_name=NA12877_ch_T0000180;gene_name=CD99P1;ID=exon:NA12877_ch_T0000180:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145300	2175014	1000	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=NA12877_ch_T0000181;Name=CD99P1
NA12877_chrY	CAT	exon	2145300	2145394	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=exon:NA12877_ch_T0000181:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145395	2147395	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=intron:NA12877_ch_T0000181:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=exon:NA12877_ch_T0000181:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=intron:NA12877_ch_T0000181:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=exon:NA12877_ch_T0000181:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=intron:NA12877_ch_T0000181:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=exon:NA12877_ch_T0000181:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=intron:NA12877_ch_T0000181:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=exon:NA12877_ch_T0000181:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=intron:NA12877_ch_T0000181:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=exon:NA12877_ch_T0000181:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=intron:NA12877_ch_T0000181:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=exon:NA12877_ch_T0000181:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=intron:NA12877_ch_T0000181:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=exon:NA12877_ch_T0000181:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=intron:NA12877_ch_T0000181:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=exon:NA12877_ch_T0000181:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=intron:NA12877_ch_T0000181:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175014	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000181;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000181;transcript_name=NA12877_ch_T0000181;gene_name=CD99P1;ID=exon:NA12877_ch_T0000181:9;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145355	2159202	1000	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=NA12877_ch_T0000182;Name=CD99P1
NA12877_chrY	CAT	exon	2145355	2145394	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=exon:NA12877_ch_T0000182:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145395	2147395	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=intron:NA12877_ch_T0000182:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=exon:NA12877_ch_T0000182:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=intron:NA12877_ch_T0000182:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=exon:NA12877_ch_T0000182:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=intron:NA12877_ch_T0000182:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=exon:NA12877_ch_T0000182:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=intron:NA12877_ch_T0000182:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=exon:NA12877_ch_T0000182:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=intron:NA12877_ch_T0000182:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=exon:NA12877_ch_T0000182:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=intron:NA12877_ch_T0000182:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159202	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000182;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000182;transcript_name=NA12877_ch_T0000182;gene_name=CD99P1;ID=exon:NA12877_ch_T0000182:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145757	2175014	1000	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=NA12877_ch_T0000184;Name=CD99P1
NA12877_chrY	CAT	exon	2145757	2145895	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=exon:NA12877_ch_T0000184:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=intron:NA12877_ch_T0000184:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=exon:NA12877_ch_T0000184:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=intron:NA12877_ch_T0000184:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=exon:NA12877_ch_T0000184:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2155130	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=intron:NA12877_ch_T0000184:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=exon:NA12877_ch_T0000184:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=intron:NA12877_ch_T0000184:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=exon:NA12877_ch_T0000184:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=intron:NA12877_ch_T0000184:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=exon:NA12877_ch_T0000184:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=intron:NA12877_ch_T0000184:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=exon:NA12877_ch_T0000184:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=intron:NA12877_ch_T0000184:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175014	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000184;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000184;transcript_name=NA12877_ch_T0000184;gene_name=CD99P1;ID=exon:NA12877_ch_T0000184:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145766	2175008	1000	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=NA12877_ch_T0000185;Name=CD99P1
NA12877_chrY	CAT	exon	2145766	2145895	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=exon:NA12877_ch_T0000185:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=intron:NA12877_ch_T0000185:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=exon:NA12877_ch_T0000185:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=intron:NA12877_ch_T0000185:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=exon:NA12877_ch_T0000185:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=intron:NA12877_ch_T0000185:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=exon:NA12877_ch_T0000185:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=intron:NA12877_ch_T0000185:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=exon:NA12877_ch_T0000185:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=intron:NA12877_ch_T0000185:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=exon:NA12877_ch_T0000185:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=intron:NA12877_ch_T0000185:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159848	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=exon:NA12877_ch_T0000185:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=intron:NA12877_ch_T0000185:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=exon:NA12877_ch_T0000185:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=intron:NA12877_ch_T0000185:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000185;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000185;transcript_name=NA12877_ch_T0000185;gene_name=CD99P1;ID=exon:NA12877_ch_T0000185:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145768	2175015	1000	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=NA12877_ch_T0000186;Name=CD99P1
NA12877_chrY	CAT	exon	2145768	2145895	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=exon:NA12877_ch_T0000186:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=intron:NA12877_ch_T0000186:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=exon:NA12877_ch_T0000186:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=intron:NA12877_ch_T0000186:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=exon:NA12877_ch_T0000186:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=intron:NA12877_ch_T0000186:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=exon:NA12877_ch_T0000186:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=intron:NA12877_ch_T0000186:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=exon:NA12877_ch_T0000186:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=intron:NA12877_ch_T0000186:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=exon:NA12877_ch_T0000186:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=intron:NA12877_ch_T0000186:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=exon:NA12877_ch_T0000186:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=intron:NA12877_ch_T0000186:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=exon:NA12877_ch_T0000186:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=intron:NA12877_ch_T0000186:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=exon:NA12877_ch_T0000186:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=intron:NA12877_ch_T0000186:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175015	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000186;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000186;transcript_name=NA12877_ch_T0000186;gene_name=CD99P1;ID=exon:NA12877_ch_T0000186:9;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145774	2175403	1000	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=NA12877_ch_T0000187;Name=CD99P1
NA12877_chrY	CAT	exon	2145774	2145895	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=exon:NA12877_ch_T0000187:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=intron:NA12877_ch_T0000187:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=exon:NA12877_ch_T0000187:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=intron:NA12877_ch_T0000187:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=exon:NA12877_ch_T0000187:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=intron:NA12877_ch_T0000187:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=exon:NA12877_ch_T0000187:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=intron:NA12877_ch_T0000187:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=exon:NA12877_ch_T0000187:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=intron:NA12877_ch_T0000187:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=exon:NA12877_ch_T0000187:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=intron:NA12877_ch_T0000187:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=exon:NA12877_ch_T0000187:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=intron:NA12877_ch_T0000187:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=exon:NA12877_ch_T0000187:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=intron:NA12877_ch_T0000187:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175403	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000187;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000187;transcript_name=NA12877_ch_T0000187;gene_name=CD99P1;ID=exon:NA12877_ch_T0000187:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145774	2175008	1000	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000188;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000188;gene_name=CD99P1;ID=NA12877_ch_T0000188;Name=CD99P1
NA12877_chrY	CAT	exon	2145774	2145895	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000188;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000188;transcript_name=NA12877_ch_T0000188;gene_name=CD99P1;ID=exon:NA12877_ch_T0000188:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000188;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000188;transcript_name=NA12877_ch_T0000188;gene_name=CD99P1;ID=intron:NA12877_ch_T0000188:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000188;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000188;transcript_name=NA12877_ch_T0000188;gene_name=CD99P1;ID=exon:NA12877_ch_T0000188:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000188;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000188;transcript_name=NA12877_ch_T0000188;gene_name=CD99P1;ID=intron:NA12877_ch_T0000188:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000188;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000188;transcript_name=NA12877_ch_T0000188;gene_name=CD99P1;ID=exon:NA12877_ch_T0000188:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2174652	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000188;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000188;transcript_name=NA12877_ch_T0000188;gene_name=CD99P1;ID=intron:NA12877_ch_T0000188:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000188;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000188;transcript_name=NA12877_ch_T0000188;gene_name=CD99P1;ID=exon:NA12877_ch_T0000188:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145774	2175008	1000	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=NA12877_ch_T0000189;Name=CD99P1
NA12877_chrY	CAT	exon	2145774	2145895	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=exon:NA12877_ch_T0000189:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=intron:NA12877_ch_T0000189:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=exon:NA12877_ch_T0000189:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=intron:NA12877_ch_T0000189:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=exon:NA12877_ch_T0000189:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=intron:NA12877_ch_T0000189:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=exon:NA12877_ch_T0000189:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=intron:NA12877_ch_T0000189:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=exon:NA12877_ch_T0000189:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=intron:NA12877_ch_T0000189:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=exon:NA12877_ch_T0000189:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=intron:NA12877_ch_T0000189:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=exon:NA12877_ch_T0000189:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=intron:NA12877_ch_T0000189:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=exon:NA12877_ch_T0000189:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2174652	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=intron:NA12877_ch_T0000189:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000189;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000189;transcript_name=NA12877_ch_T0000189;gene_name=CD99P1;ID=exon:NA12877_ch_T0000189:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145774	2195722	1000	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=NA12877_ch_T0000190;Name=CD99P1
NA12877_chrY	CAT	exon	2145774	2145895	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=exon:NA12877_ch_T0000190:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=intron:NA12877_ch_T0000190:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=exon:NA12877_ch_T0000190:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=intron:NA12877_ch_T0000190:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=exon:NA12877_ch_T0000190:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=intron:NA12877_ch_T0000190:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=exon:NA12877_ch_T0000190:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=intron:NA12877_ch_T0000190:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=exon:NA12877_ch_T0000190:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=intron:NA12877_ch_T0000190:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=exon:NA12877_ch_T0000190:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=intron:NA12877_ch_T0000190:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=exon:NA12877_ch_T0000190:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=intron:NA12877_ch_T0000190:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=exon:NA12877_ch_T0000190:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2195162	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=intron:NA12877_ch_T0000190:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2195163	2195722	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000190;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000190;transcript_name=NA12877_ch_T0000190;gene_name=CD99P1;ID=exon:NA12877_ch_T0000190:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145774	2153895	1000	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000191;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000191;gene_name=CD99P1;ID=NA12877_ch_T0000191;Name=CD99P1
NA12877_chrY	CAT	exon	2145774	2145895	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000191;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000191;transcript_name=NA12877_ch_T0000191;gene_name=CD99P1;ID=exon:NA12877_ch_T0000191:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000191;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000191;transcript_name=NA12877_ch_T0000191;gene_name=CD99P1;ID=intron:NA12877_ch_T0000191:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000191;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000191;transcript_name=NA12877_ch_T0000191;gene_name=CD99P1;ID=exon:NA12877_ch_T0000191:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000191;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000191;transcript_name=NA12877_ch_T0000191;gene_name=CD99P1;ID=intron:NA12877_ch_T0000191:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000191;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000191;transcript_name=NA12877_ch_T0000191;gene_name=CD99P1;ID=exon:NA12877_ch_T0000191:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000191;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000191;transcript_name=NA12877_ch_T0000191;gene_name=CD99P1;ID=intron:NA12877_ch_T0000191:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2153895	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000191;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000191;transcript_name=NA12877_ch_T0000191;gene_name=CD99P1;ID=exon:NA12877_ch_T0000191:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145783	2175014	1000	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=NA12877_ch_T0000192;Name=CD99P1
NA12877_chrY	CAT	exon	2145783	2145895	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=exon:NA12877_ch_T0000192:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=intron:NA12877_ch_T0000192:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=exon:NA12877_ch_T0000192:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=intron:NA12877_ch_T0000192:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=exon:NA12877_ch_T0000192:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=intron:NA12877_ch_T0000192:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=exon:NA12877_ch_T0000192:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=intron:NA12877_ch_T0000192:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=exon:NA12877_ch_T0000192:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=intron:NA12877_ch_T0000192:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=exon:NA12877_ch_T0000192:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2174652	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=intron:NA12877_ch_T0000192:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175014	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000192;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000192;transcript_name=NA12877_ch_T0000192;gene_name=CD99P1;ID=exon:NA12877_ch_T0000192:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145790	2202833	1000	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=NA12877_ch_T0000193;Name=CD99P1
NA12877_chrY	CAT	exon	2145790	2145895	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=exon:NA12877_ch_T0000193:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=intron:NA12877_ch_T0000193:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=exon:NA12877_ch_T0000193:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=intron:NA12877_ch_T0000193:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=exon:NA12877_ch_T0000193:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=intron:NA12877_ch_T0000193:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=exon:NA12877_ch_T0000193:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=intron:NA12877_ch_T0000193:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=exon:NA12877_ch_T0000193:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=intron:NA12877_ch_T0000193:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=exon:NA12877_ch_T0000193:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=intron:NA12877_ch_T0000193:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=exon:NA12877_ch_T0000193:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=intron:NA12877_ch_T0000193:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=exon:NA12877_ch_T0000193:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=intron:NA12877_ch_T0000193:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=exon:NA12877_ch_T0000193:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2202313	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=intron:NA12877_ch_T0000193:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2202314	2202833	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000193;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000193;transcript_name=NA12877_ch_T0000193;gene_name=CD99P1;ID=exon:NA12877_ch_T0000193:9;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145790	2175403	1000	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=NA12877_ch_T0000194;Name=CD99P1
NA12877_chrY	CAT	exon	2145790	2145895	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=exon:NA12877_ch_T0000194:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=intron:NA12877_ch_T0000194:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=exon:NA12877_ch_T0000194:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=intron:NA12877_ch_T0000194:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=exon:NA12877_ch_T0000194:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2155130	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=intron:NA12877_ch_T0000194:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=exon:NA12877_ch_T0000194:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=intron:NA12877_ch_T0000194:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=exon:NA12877_ch_T0000194:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=intron:NA12877_ch_T0000194:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=exon:NA12877_ch_T0000194:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=intron:NA12877_ch_T0000194:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=exon:NA12877_ch_T0000194:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=intron:NA12877_ch_T0000194:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=exon:NA12877_ch_T0000194:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=intron:NA12877_ch_T0000194:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175403	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000194;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000194;transcript_name=NA12877_ch_T0000194;gene_name=CD99P1;ID=exon:NA12877_ch_T0000194:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145790	2175014	1000	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=NA12877_ch_T0000195;Name=CD99P1
NA12877_chrY	CAT	exon	2145790	2145895	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=exon:NA12877_ch_T0000195:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=intron:NA12877_ch_T0000195:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=exon:NA12877_ch_T0000195:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=intron:NA12877_ch_T0000195:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=exon:NA12877_ch_T0000195:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=intron:NA12877_ch_T0000195:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=exon:NA12877_ch_T0000195:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=intron:NA12877_ch_T0000195:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=exon:NA12877_ch_T0000195:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=intron:NA12877_ch_T0000195:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=exon:NA12877_ch_T0000195:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=intron:NA12877_ch_T0000195:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=exon:NA12877_ch_T0000195:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2174652	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=intron:NA12877_ch_T0000195:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175014	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000195;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000195;transcript_name=NA12877_ch_T0000195;gene_name=CD99P1;ID=exon:NA12877_ch_T0000195:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145800	2175008	1000	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=NA12877_ch_T0000196;Name=CD99P1
NA12877_chrY	CAT	exon	2145800	2145895	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=exon:NA12877_ch_T0000196:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=intron:NA12877_ch_T0000196:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=exon:NA12877_ch_T0000196:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=intron:NA12877_ch_T0000196:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=exon:NA12877_ch_T0000196:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=intron:NA12877_ch_T0000196:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=exon:NA12877_ch_T0000196:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155148	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=intron:NA12877_ch_T0000196:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155149	2155175	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=exon:NA12877_ch_T0000196:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=intron:NA12877_ch_T0000196:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=exon:NA12877_ch_T0000196:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=intron:NA12877_ch_T0000196:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=exon:NA12877_ch_T0000196:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=intron:NA12877_ch_T0000196:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=exon:NA12877_ch_T0000196:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=intron:NA12877_ch_T0000196:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000196;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000196;transcript_name=NA12877_ch_T0000196;gene_name=CD99P1;ID=exon:NA12877_ch_T0000196:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145800	2175400	1000	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=NA12877_ch_T0000197;Name=CD99P1
NA12877_chrY	CAT	exon	2145800	2145895	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=exon:NA12877_ch_T0000197:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=intron:NA12877_ch_T0000197:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=exon:NA12877_ch_T0000197:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=intron:NA12877_ch_T0000197:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=exon:NA12877_ch_T0000197:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=intron:NA12877_ch_T0000197:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=exon:NA12877_ch_T0000197:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=intron:NA12877_ch_T0000197:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=exon:NA12877_ch_T0000197:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155784	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=intron:NA12877_ch_T0000197:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155785	2155888	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=exon:NA12877_ch_T0000197:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=intron:NA12877_ch_T0000197:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=exon:NA12877_ch_T0000197:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=intron:NA12877_ch_T0000197:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=exon:NA12877_ch_T0000197:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=intron:NA12877_ch_T0000197:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175400	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000197;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000197;transcript_name=NA12877_ch_T0000197;gene_name=CD99P1;ID=exon:NA12877_ch_T0000197:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145802	2175012	1000	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000198;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000198;gene_name=CD99P1;ID=NA12877_ch_T0000198;Name=CD99P1
NA12877_chrY	CAT	exon	2145802	2145895	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000198;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000198;transcript_name=NA12877_ch_T0000198;gene_name=CD99P1;ID=exon:NA12877_ch_T0000198:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2174652	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000198;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000198;transcript_name=NA12877_ch_T0000198;gene_name=CD99P1;ID=intron:NA12877_ch_T0000198:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175012	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000198;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000198;transcript_name=NA12877_ch_T0000198;gene_name=CD99P1;ID=exon:NA12877_ch_T0000198:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145807	2195602	1000	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=NA12877_ch_T0000199;Name=CD99P1
NA12877_chrY	CAT	exon	2145807	2145895	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=exon:NA12877_ch_T0000199:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=intron:NA12877_ch_T0000199:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=exon:NA12877_ch_T0000199:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=intron:NA12877_ch_T0000199:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=exon:NA12877_ch_T0000199:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=intron:NA12877_ch_T0000199:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=exon:NA12877_ch_T0000199:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=intron:NA12877_ch_T0000199:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=exon:NA12877_ch_T0000199:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=intron:NA12877_ch_T0000199:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=exon:NA12877_ch_T0000199:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=intron:NA12877_ch_T0000199:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=exon:NA12877_ch_T0000199:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=intron:NA12877_ch_T0000199:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=exon:NA12877_ch_T0000199:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=intron:NA12877_ch_T0000199:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=exon:NA12877_ch_T0000199:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2195162	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=intron:NA12877_ch_T0000199:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2195163	2195602	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000199;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000199;transcript_name=NA12877_ch_T0000199;gene_name=CD99P1;ID=exon:NA12877_ch_T0000199:9;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145807	2202834	1000	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=NA12877_ch_T0000200;Name=CD99P1
NA12877_chrY	CAT	exon	2145807	2145895	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=exon:NA12877_ch_T0000200:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=intron:NA12877_ch_T0000200:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=exon:NA12877_ch_T0000200:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=intron:NA12877_ch_T0000200:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=exon:NA12877_ch_T0000200:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=intron:NA12877_ch_T0000200:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=exon:NA12877_ch_T0000200:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=intron:NA12877_ch_T0000200:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=exon:NA12877_ch_T0000200:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=intron:NA12877_ch_T0000200:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=exon:NA12877_ch_T0000200:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=intron:NA12877_ch_T0000200:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=exon:NA12877_ch_T0000200:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=intron:NA12877_ch_T0000200:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=exon:NA12877_ch_T0000200:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2202313	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=intron:NA12877_ch_T0000200:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2202314	2202834	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000200;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000200;transcript_name=NA12877_ch_T0000200;gene_name=CD99P1;ID=exon:NA12877_ch_T0000200:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145807	2195601	1000	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=NA12877_ch_T0000201;Name=CD99P1
NA12877_chrY	CAT	exon	2145807	2145895	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=exon:NA12877_ch_T0000201:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=intron:NA12877_ch_T0000201:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=exon:NA12877_ch_T0000201:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=intron:NA12877_ch_T0000201:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=exon:NA12877_ch_T0000201:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2155130	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=intron:NA12877_ch_T0000201:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=exon:NA12877_ch_T0000201:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=intron:NA12877_ch_T0000201:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=exon:NA12877_ch_T0000201:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=intron:NA12877_ch_T0000201:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=exon:NA12877_ch_T0000201:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=intron:NA12877_ch_T0000201:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=exon:NA12877_ch_T0000201:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=intron:NA12877_ch_T0000201:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=exon:NA12877_ch_T0000201:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2195162	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=intron:NA12877_ch_T0000201:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2195163	2195601	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000201;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000201;transcript_name=NA12877_ch_T0000201;gene_name=CD99P1;ID=exon:NA12877_ch_T0000201:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145807	2163709	1000	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=NA12877_ch_T0000202;Name=CD99P1
NA12877_chrY	CAT	exon	2145807	2145895	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=exon:NA12877_ch_T0000202:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=intron:NA12877_ch_T0000202:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=exon:NA12877_ch_T0000202:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=intron:NA12877_ch_T0000202:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=exon:NA12877_ch_T0000202:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=intron:NA12877_ch_T0000202:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=exon:NA12877_ch_T0000202:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=intron:NA12877_ch_T0000202:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=exon:NA12877_ch_T0000202:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=intron:NA12877_ch_T0000202:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=exon:NA12877_ch_T0000202:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=intron:NA12877_ch_T0000202:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=exon:NA12877_ch_T0000202:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=intron:NA12877_ch_T0000202:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163709	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000202;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000202;transcript_name=NA12877_ch_T0000202;gene_name=CD99P1;ID=exon:NA12877_ch_T0000202:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145807	2155444	1000	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000203;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000203;gene_name=CD99P1;ID=NA12877_ch_T0000203;Name=CD99P1
NA12877_chrY	CAT	exon	2145807	2145895	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000203;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000203;transcript_name=NA12877_ch_T0000203;gene_name=CD99P1;ID=exon:NA12877_ch_T0000203:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2152206	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000203;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000203;transcript_name=NA12877_ch_T0000203;gene_name=CD99P1;ID=intron:NA12877_ch_T0000203:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000203;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000203;transcript_name=NA12877_ch_T0000203;gene_name=CD99P1;ID=exon:NA12877_ch_T0000203:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000203;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000203;transcript_name=NA12877_ch_T0000203;gene_name=CD99P1;ID=intron:NA12877_ch_T0000203:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155444	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000203;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000203;transcript_name=NA12877_ch_T0000203;gene_name=CD99P1;ID=exon:NA12877_ch_T0000203:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145807	2184829	1000	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=NA12877_ch_T0000204;Name=CD99P1
NA12877_chrY	CAT	exon	2145807	2145895	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=exon:NA12877_ch_T0000204:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=intron:NA12877_ch_T0000204:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=exon:NA12877_ch_T0000204:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=intron:NA12877_ch_T0000204:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=exon:NA12877_ch_T0000204:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=intron:NA12877_ch_T0000204:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=exon:NA12877_ch_T0000204:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=intron:NA12877_ch_T0000204:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=exon:NA12877_ch_T0000204:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=intron:NA12877_ch_T0000204:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=exon:NA12877_ch_T0000204:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=intron:NA12877_ch_T0000204:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=exon:NA12877_ch_T0000204:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=intron:NA12877_ch_T0000204:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=exon:NA12877_ch_T0000204:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2184183	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=intron:NA12877_ch_T0000204:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2184184	2184829	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000204;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000204;transcript_name=NA12877_ch_T0000204;gene_name=CD99P1;ID=exon:NA12877_ch_T0000204:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145807	2195570	1000	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=NA12877_ch_T0000205;Name=CD99P1
NA12877_chrY	CAT	exon	2145807	2145895	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=exon:NA12877_ch_T0000205:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=intron:NA12877_ch_T0000205:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=exon:NA12877_ch_T0000205:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=intron:NA12877_ch_T0000205:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=exon:NA12877_ch_T0000205:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=intron:NA12877_ch_T0000205:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=exon:NA12877_ch_T0000205:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=intron:NA12877_ch_T0000205:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=exon:NA12877_ch_T0000205:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=intron:NA12877_ch_T0000205:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=exon:NA12877_ch_T0000205:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=intron:NA12877_ch_T0000205:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=exon:NA12877_ch_T0000205:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=intron:NA12877_ch_T0000205:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=exon:NA12877_ch_T0000205:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2195103	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=intron:NA12877_ch_T0000205:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2195104	2195570	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000205;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000205;transcript_name=NA12877_ch_T0000205;gene_name=CD99P1;ID=exon:NA12877_ch_T0000205:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145807	2195569	1000	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=NA12877_ch_T0000206;Name=CD99P1
NA12877_chrY	CAT	exon	2145807	2145895	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=exon:NA12877_ch_T0000206:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=intron:NA12877_ch_T0000206:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=exon:NA12877_ch_T0000206:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=intron:NA12877_ch_T0000206:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=exon:NA12877_ch_T0000206:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=intron:NA12877_ch_T0000206:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=exon:NA12877_ch_T0000206:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=intron:NA12877_ch_T0000206:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=exon:NA12877_ch_T0000206:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=intron:NA12877_ch_T0000206:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=exon:NA12877_ch_T0000206:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=intron:NA12877_ch_T0000206:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=exon:NA12877_ch_T0000206:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=intron:NA12877_ch_T0000206:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=exon:NA12877_ch_T0000206:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=intron:NA12877_ch_T0000206:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=exon:NA12877_ch_T0000206:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2195103	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=intron:NA12877_ch_T0000206:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2195104	2195569	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000206;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000206;transcript_name=NA12877_ch_T0000206;gene_name=CD99P1;ID=exon:NA12877_ch_T0000206:9;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145807	2195570	1000	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=NA12877_ch_T0000207;Name=CD99P1
NA12877_chrY	CAT	exon	2145807	2145895	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=exon:NA12877_ch_T0000207:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=intron:NA12877_ch_T0000207:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=exon:NA12877_ch_T0000207:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=intron:NA12877_ch_T0000207:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=exon:NA12877_ch_T0000207:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=intron:NA12877_ch_T0000207:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=exon:NA12877_ch_T0000207:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=intron:NA12877_ch_T0000207:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=exon:NA12877_ch_T0000207:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=intron:NA12877_ch_T0000207:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=exon:NA12877_ch_T0000207:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=intron:NA12877_ch_T0000207:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=exon:NA12877_ch_T0000207:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=intron:NA12877_ch_T0000207:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=exon:NA12877_ch_T0000207:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=intron:NA12877_ch_T0000207:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=exon:NA12877_ch_T0000207:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2195122	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=intron:NA12877_ch_T0000207:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2195123	2195570	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000207;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000207;transcript_name=NA12877_ch_T0000207;gene_name=CD99P1;ID=exon:NA12877_ch_T0000207:9;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145812	2194691	1000	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=NA12877_ch_T0000208;Name=CD99P1
NA12877_chrY	CAT	exon	2145812	2145895	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=exon:NA12877_ch_T0000208:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=intron:NA12877_ch_T0000208:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=exon:NA12877_ch_T0000208:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=intron:NA12877_ch_T0000208:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=exon:NA12877_ch_T0000208:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=intron:NA12877_ch_T0000208:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=exon:NA12877_ch_T0000208:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=intron:NA12877_ch_T0000208:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=exon:NA12877_ch_T0000208:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=intron:NA12877_ch_T0000208:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=exon:NA12877_ch_T0000208:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=intron:NA12877_ch_T0000208:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=exon:NA12877_ch_T0000208:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=intron:NA12877_ch_T0000208:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=exon:NA12877_ch_T0000208:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=intron:NA12877_ch_T0000208:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=exon:NA12877_ch_T0000208:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2194540	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=intron:NA12877_ch_T0000208:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2194541	2194691	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000208;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000208;transcript_name=NA12877_ch_T0000208;gene_name=CD99P1;ID=exon:NA12877_ch_T0000208:9;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145815	2175010	1000	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=NA12877_ch_T0000209;Name=CD99P1
NA12877_chrY	CAT	exon	2145815	2145895	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=exon:NA12877_ch_T0000209:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=intron:NA12877_ch_T0000209:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=exon:NA12877_ch_T0000209:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=intron:NA12877_ch_T0000209:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=exon:NA12877_ch_T0000209:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=intron:NA12877_ch_T0000209:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=exon:NA12877_ch_T0000209:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=intron:NA12877_ch_T0000209:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=exon:NA12877_ch_T0000209:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=intron:NA12877_ch_T0000209:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=exon:NA12877_ch_T0000209:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159743	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=intron:NA12877_ch_T0000209:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159744	2159848	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=exon:NA12877_ch_T0000209:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=intron:NA12877_ch_T0000209:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=exon:NA12877_ch_T0000209:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=intron:NA12877_ch_T0000209:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175010	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000209;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000209;transcript_name=NA12877_ch_T0000209;gene_name=CD99P1;ID=exon:NA12877_ch_T0000209:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145815	2175008	1000	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=NA12877_ch_T0000210;Name=CD99P1
NA12877_chrY	CAT	exon	2145815	2145895	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=exon:NA12877_ch_T0000210:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=intron:NA12877_ch_T0000210:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=exon:NA12877_ch_T0000210:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2155130	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=intron:NA12877_ch_T0000210:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=exon:NA12877_ch_T0000210:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=intron:NA12877_ch_T0000210:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=exon:NA12877_ch_T0000210:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=intron:NA12877_ch_T0000210:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=exon:NA12877_ch_T0000210:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=intron:NA12877_ch_T0000210:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=exon:NA12877_ch_T0000210:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=intron:NA12877_ch_T0000210:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000210;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000210;transcript_name=NA12877_ch_T0000210;gene_name=CD99P1;ID=exon:NA12877_ch_T0000210:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145817	2175008	1000	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000211;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000211;gene_name=CD99P1;ID=NA12877_ch_T0000211;Name=CD99P1
NA12877_chrY	CAT	exon	2145817	2145895	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000211;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000211;transcript_name=NA12877_ch_T0000211;gene_name=CD99P1;ID=exon:NA12877_ch_T0000211:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000211;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000211;transcript_name=NA12877_ch_T0000211;gene_name=CD99P1;ID=intron:NA12877_ch_T0000211:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000211;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000211;transcript_name=NA12877_ch_T0000211;gene_name=CD99P1;ID=exon:NA12877_ch_T0000211:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000211;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000211;transcript_name=NA12877_ch_T0000211;gene_name=CD99P1;ID=intron:NA12877_ch_T0000211:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000211;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000211;transcript_name=NA12877_ch_T0000211;gene_name=CD99P1;ID=exon:NA12877_ch_T0000211:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000211;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000211;transcript_name=NA12877_ch_T0000211;gene_name=CD99P1;ID=intron:NA12877_ch_T0000211:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000211;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000211;transcript_name=NA12877_ch_T0000211;gene_name=CD99P1;ID=exon:NA12877_ch_T0000211:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2174652	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000211;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000211;transcript_name=NA12877_ch_T0000211;gene_name=CD99P1;ID=intron:NA12877_ch_T0000211:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000211;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000211;transcript_name=NA12877_ch_T0000211;gene_name=CD99P1;ID=exon:NA12877_ch_T0000211:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145817	2175008	1000	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=NA12877_ch_T0000212;Name=CD99P1
NA12877_chrY	CAT	exon	2145817	2145895	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=exon:NA12877_ch_T0000212:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=intron:NA12877_ch_T0000212:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=exon:NA12877_ch_T0000212:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=intron:NA12877_ch_T0000212:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=exon:NA12877_ch_T0000212:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2155130	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=intron:NA12877_ch_T0000212:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=exon:NA12877_ch_T0000212:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=intron:NA12877_ch_T0000212:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=exon:NA12877_ch_T0000212:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159743	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=intron:NA12877_ch_T0000212:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159744	2159848	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=exon:NA12877_ch_T0000212:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=intron:NA12877_ch_T0000212:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=exon:NA12877_ch_T0000212:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=intron:NA12877_ch_T0000212:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000212;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000212;transcript_name=NA12877_ch_T0000212;gene_name=CD99P1;ID=exon:NA12877_ch_T0000212:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145817	2175008	1000	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000213;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000213;gene_name=CD99P1;ID=NA12877_ch_T0000213;Name=CD99P1
NA12877_chrY	CAT	exon	2145817	2145895	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000213;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000213;transcript_name=NA12877_ch_T0000213;gene_name=CD99P1;ID=exon:NA12877_ch_T0000213:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000213;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000213;transcript_name=NA12877_ch_T0000213;gene_name=CD99P1;ID=intron:NA12877_ch_T0000213:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000213;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000213;transcript_name=NA12877_ch_T0000213;gene_name=CD99P1;ID=exon:NA12877_ch_T0000213:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000213;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000213;transcript_name=NA12877_ch_T0000213;gene_name=CD99P1;ID=intron:NA12877_ch_T0000213:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000213;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000213;transcript_name=NA12877_ch_T0000213;gene_name=CD99P1;ID=exon:NA12877_ch_T0000213:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2162995	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000213;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000213;transcript_name=NA12877_ch_T0000213;gene_name=CD99P1;ID=intron:NA12877_ch_T0000213:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000213;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000213;transcript_name=NA12877_ch_T0000213;gene_name=CD99P1;ID=exon:NA12877_ch_T0000213:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000213;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000213;transcript_name=NA12877_ch_T0000213;gene_name=CD99P1;ID=intron:NA12877_ch_T0000213:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000213;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000213;transcript_name=NA12877_ch_T0000213;gene_name=CD99P1;ID=exon:NA12877_ch_T0000213:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145818	2193889	1000	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=NA12877_ch_T0000214;Name=CD99P1
NA12877_chrY	CAT	exon	2145818	2145895	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=exon:NA12877_ch_T0000214:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=intron:NA12877_ch_T0000214:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=exon:NA12877_ch_T0000214:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=intron:NA12877_ch_T0000214:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=exon:NA12877_ch_T0000214:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=intron:NA12877_ch_T0000214:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=exon:NA12877_ch_T0000214:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=intron:NA12877_ch_T0000214:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=exon:NA12877_ch_T0000214:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=intron:NA12877_ch_T0000214:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=exon:NA12877_ch_T0000214:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=intron:NA12877_ch_T0000214:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=exon:NA12877_ch_T0000214:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=intron:NA12877_ch_T0000214:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=exon:NA12877_ch_T0000214:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2191686	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=intron:NA12877_ch_T0000214:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2191687	2193889	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000214;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000214;transcript_name=NA12877_ch_T0000214;gene_name=CD99P1;ID=exon:NA12877_ch_T0000214:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145819	2175008	1000	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=NA12877_ch_T0000215;Name=CD99P1
NA12877_chrY	CAT	exon	2145819	2145895	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=exon:NA12877_ch_T0000215:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=intron:NA12877_ch_T0000215:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=exon:NA12877_ch_T0000215:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=intron:NA12877_ch_T0000215:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=exon:NA12877_ch_T0000215:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=intron:NA12877_ch_T0000215:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=exon:NA12877_ch_T0000215:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2154923	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=intron:NA12877_ch_T0000215:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2154924	2155007	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=exon:NA12877_ch_T0000215:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155008	2155130	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=intron:NA12877_ch_T0000215:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=exon:NA12877_ch_T0000215:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=intron:NA12877_ch_T0000215:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=exon:NA12877_ch_T0000215:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=intron:NA12877_ch_T0000215:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=exon:NA12877_ch_T0000215:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=intron:NA12877_ch_T0000215:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=exon:NA12877_ch_T0000215:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=intron:NA12877_ch_T0000215:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000215;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000215;transcript_name=NA12877_ch_T0000215;gene_name=CD99P1;ID=exon:NA12877_ch_T0000215:9;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145820	2175008	1000	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000216;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000216;gene_name=CD99P1;ID=NA12877_ch_T0000216;Name=CD99P1
NA12877_chrY	CAT	exon	2145820	2145895	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000216;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000216;transcript_name=NA12877_ch_T0000216;gene_name=CD99P1;ID=exon:NA12877_ch_T0000216:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000216;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000216;transcript_name=NA12877_ch_T0000216;gene_name=CD99P1;ID=intron:NA12877_ch_T0000216:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000216;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000216;transcript_name=NA12877_ch_T0000216;gene_name=CD99P1;ID=exon:NA12877_ch_T0000216:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000216;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000216;transcript_name=NA12877_ch_T0000216;gene_name=CD99P1;ID=intron:NA12877_ch_T0000216:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000216;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000216;transcript_name=NA12877_ch_T0000216;gene_name=CD99P1;ID=exon:NA12877_ch_T0000216:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2159779	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000216;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000216;transcript_name=NA12877_ch_T0000216;gene_name=CD99P1;ID=intron:NA12877_ch_T0000216:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000216;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000216;transcript_name=NA12877_ch_T0000216;gene_name=CD99P1;ID=exon:NA12877_ch_T0000216:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000216;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000216;transcript_name=NA12877_ch_T0000216;gene_name=CD99P1;ID=intron:NA12877_ch_T0000216:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000216;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000216;transcript_name=NA12877_ch_T0000216;gene_name=CD99P1;ID=exon:NA12877_ch_T0000216:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000216;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000216;transcript_name=NA12877_ch_T0000216;gene_name=CD99P1;ID=intron:NA12877_ch_T0000216:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000216;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000216;transcript_name=NA12877_ch_T0000216;gene_name=CD99P1;ID=exon:NA12877_ch_T0000216:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145820	2175006	1000	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=NA12877_ch_T0000217;Name=CD99P1
NA12877_chrY	CAT	exon	2145820	2145895	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=exon:NA12877_ch_T0000217:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=intron:NA12877_ch_T0000217:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=exon:NA12877_ch_T0000217:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=intron:NA12877_ch_T0000217:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=exon:NA12877_ch_T0000217:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=intron:NA12877_ch_T0000217:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=exon:NA12877_ch_T0000217:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2154923	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=intron:NA12877_ch_T0000217:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2154924	2155007	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=exon:NA12877_ch_T0000217:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155008	2155130	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=intron:NA12877_ch_T0000217:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=exon:NA12877_ch_T0000217:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=intron:NA12877_ch_T0000217:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=exon:NA12877_ch_T0000217:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=intron:NA12877_ch_T0000217:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=exon:NA12877_ch_T0000217:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=intron:NA12877_ch_T0000217:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=exon:NA12877_ch_T0000217:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=intron:NA12877_ch_T0000217:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=exon:NA12877_ch_T0000217:9;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=intron:NA12877_ch_T0000217:9;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175006	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000217;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000217;transcript_name=NA12877_ch_T0000217;gene_name=CD99P1;ID=exon:NA12877_ch_T0000217:10;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145820	2163682	1000	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=NA12877_ch_T0000218;Name=CD99P1
NA12877_chrY	CAT	exon	2145820	2145895	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=exon:NA12877_ch_T0000218:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=intron:NA12877_ch_T0000218:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=exon:NA12877_ch_T0000218:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=intron:NA12877_ch_T0000218:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=exon:NA12877_ch_T0000218:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=intron:NA12877_ch_T0000218:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=exon:NA12877_ch_T0000218:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2153867	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=intron:NA12877_ch_T0000218:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2153868	2153977	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=exon:NA12877_ch_T0000218:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2153978	2155130	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=intron:NA12877_ch_T0000218:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=exon:NA12877_ch_T0000218:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=intron:NA12877_ch_T0000218:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=exon:NA12877_ch_T0000218:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=intron:NA12877_ch_T0000218:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=exon:NA12877_ch_T0000218:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=intron:NA12877_ch_T0000218:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=exon:NA12877_ch_T0000218:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2163502	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=intron:NA12877_ch_T0000218:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2163503	2163682	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000218;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000218;transcript_name=NA12877_ch_T0000218;gene_name=CD99P1;ID=exon:NA12877_ch_T0000218:9;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145835	2148786	1000	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000220;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000220;gene_name=CD99P1;ID=NA12877_ch_T0000220;Name=CD99P1
NA12877_chrY	CAT	exon	2145835	2145895	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000220;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000220;transcript_name=NA12877_ch_T0000220;gene_name=CD99P1;ID=exon:NA12877_ch_T0000220:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000220;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000220;transcript_name=NA12877_ch_T0000220;gene_name=CD99P1;ID=intron:NA12877_ch_T0000220:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000220;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000220;transcript_name=NA12877_ch_T0000220;gene_name=CD99P1;ID=exon:NA12877_ch_T0000220:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000220;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000220;transcript_name=NA12877_ch_T0000220;gene_name=CD99P1;ID=intron:NA12877_ch_T0000220:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148786	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000220;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000220;transcript_name=NA12877_ch_T0000220;gene_name=CD99P1;ID=exon:NA12877_ch_T0000220:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145835	2175008	1000	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=NA12877_ch_T0000221;Name=CD99P1
NA12877_chrY	CAT	exon	2145835	2145895	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=exon:NA12877_ch_T0000221:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=intron:NA12877_ch_T0000221:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=exon:NA12877_ch_T0000221:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148505	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=intron:NA12877_ch_T0000221:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148506	2148610	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=exon:NA12877_ch_T0000221:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=intron:NA12877_ch_T0000221:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=exon:NA12877_ch_T0000221:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=intron:NA12877_ch_T0000221:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=exon:NA12877_ch_T0000221:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=intron:NA12877_ch_T0000221:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=exon:NA12877_ch_T0000221:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=intron:NA12877_ch_T0000221:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=exon:NA12877_ch_T0000221:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=intron:NA12877_ch_T0000221:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=exon:NA12877_ch_T0000221:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=intron:NA12877_ch_T0000221:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000221;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000221;transcript_name=NA12877_ch_T0000221;gene_name=CD99P1;ID=exon:NA12877_ch_T0000221:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145835	2175008	1000	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=NA12877_ch_T0000222;Name=CD99P1
NA12877_chrY	CAT	exon	2145835	2145895	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=exon:NA12877_ch_T0000222:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=intron:NA12877_ch_T0000222:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=exon:NA12877_ch_T0000222:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2154923	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=intron:NA12877_ch_T0000222:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2154924	2155007	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=exon:NA12877_ch_T0000222:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155008	2155130	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=intron:NA12877_ch_T0000222:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=exon:NA12877_ch_T0000222:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=intron:NA12877_ch_T0000222:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=exon:NA12877_ch_T0000222:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=intron:NA12877_ch_T0000222:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=exon:NA12877_ch_T0000222:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=intron:NA12877_ch_T0000222:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=exon:NA12877_ch_T0000222:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=intron:NA12877_ch_T0000222:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=exon:NA12877_ch_T0000222:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=intron:NA12877_ch_T0000222:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000222;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000222;transcript_name=NA12877_ch_T0000222;gene_name=CD99P1;ID=exon:NA12877_ch_T0000222:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145835	2165226	1000	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=NA12877_ch_T0000223;Name=CD99P1
NA12877_chrY	CAT	exon	2145835	2145895	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=exon:NA12877_ch_T0000223:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=intron:NA12877_ch_T0000223:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=exon:NA12877_ch_T0000223:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=intron:NA12877_ch_T0000223:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=exon:NA12877_ch_T0000223:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=intron:NA12877_ch_T0000223:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=exon:NA12877_ch_T0000223:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=intron:NA12877_ch_T0000223:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=exon:NA12877_ch_T0000223:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=intron:NA12877_ch_T0000223:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=exon:NA12877_ch_T0000223:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=intron:NA12877_ch_T0000223:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=exon:NA12877_ch_T0000223:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=intron:NA12877_ch_T0000223:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=exon:NA12877_ch_T0000223:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2164787	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=intron:NA12877_ch_T0000223:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2164788	2165226	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000223;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000223;transcript_name=NA12877_ch_T0000223;gene_name=CD99P1;ID=exon:NA12877_ch_T0000223:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2145835	2175008	1000	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=NA12877_ch_T0000224;Name=CD99P1
NA12877_chrY	CAT	exon	2145835	2145895	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=exon:NA12877_ch_T0000224:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=intron:NA12877_ch_T0000224:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=exon:NA12877_ch_T0000224:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=intron:NA12877_ch_T0000224:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=exon:NA12877_ch_T0000224:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=intron:NA12877_ch_T0000224:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152390	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=exon:NA12877_ch_T0000224:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152391	2155130	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=intron:NA12877_ch_T0000224:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=exon:NA12877_ch_T0000224:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=intron:NA12877_ch_T0000224:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=exon:NA12877_ch_T0000224:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=intron:NA12877_ch_T0000224:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=exon:NA12877_ch_T0000224:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=intron:NA12877_ch_T0000224:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=exon:NA12877_ch_T0000224:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=intron:NA12877_ch_T0000224:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000224;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000224;transcript_name=NA12877_ch_T0000224;gene_name=CD99P1;ID=exon:NA12877_ch_T0000224:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2146039	2159803	1000	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=NA12877_ch_T0000225;Name=CD99P1
NA12877_chrY	CAT	exon	2146039	2146104	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=exon:NA12877_ch_T0000225:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2146105	2147395	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=intron:NA12877_ch_T0000225:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=exon:NA12877_ch_T0000225:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=intron:NA12877_ch_T0000225:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=exon:NA12877_ch_T0000225:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=intron:NA12877_ch_T0000225:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=exon:NA12877_ch_T0000225:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=intron:NA12877_ch_T0000225:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=exon:NA12877_ch_T0000225:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=intron:NA12877_ch_T0000225:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=exon:NA12877_ch_T0000225:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=intron:NA12877_ch_T0000225:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159803	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000225;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000225;transcript_name=NA12877_ch_T0000225;gene_name=CD99P1;ID=exon:NA12877_ch_T0000225:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2146395	2175008	1000	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=NA12877_ch_T0000226;Name=CD99P1
NA12877_chrY	CAT	exon	2146395	2146629	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=exon:NA12877_ch_T0000226:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2146630	2147395	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=intron:NA12877_ch_T0000226:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=exon:NA12877_ch_T0000226:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=intron:NA12877_ch_T0000226:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=exon:NA12877_ch_T0000226:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=intron:NA12877_ch_T0000226:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=exon:NA12877_ch_T0000226:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=intron:NA12877_ch_T0000226:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=exon:NA12877_ch_T0000226:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=intron:NA12877_ch_T0000226:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=exon:NA12877_ch_T0000226:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=intron:NA12877_ch_T0000226:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=exon:NA12877_ch_T0000226:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=intron:NA12877_ch_T0000226:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=exon:NA12877_ch_T0000226:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=intron:NA12877_ch_T0000226:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=exon:NA12877_ch_T0000226:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=intron:NA12877_ch_T0000226:8;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000226;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000226;transcript_name=NA12877_ch_T0000226;gene_name=CD99P1;ID=exon:NA12877_ch_T0000226:9;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2146434	2175001	1000	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=NA12877_ch_T0000227;Name=CD99P1
NA12877_chrY	CAT	exon	2146434	2146629	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=exon:NA12877_ch_T0000227:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2146630	2147395	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=intron:NA12877_ch_T0000227:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=exon:NA12877_ch_T0000227:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=intron:NA12877_ch_T0000227:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=exon:NA12877_ch_T0000227:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2155130	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=intron:NA12877_ch_T0000227:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=exon:NA12877_ch_T0000227:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=intron:NA12877_ch_T0000227:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=exon:NA12877_ch_T0000227:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159743	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=intron:NA12877_ch_T0000227:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159744	2159848	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=exon:NA12877_ch_T0000227:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=intron:NA12877_ch_T0000227:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=exon:NA12877_ch_T0000227:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=intron:NA12877_ch_T0000227:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175001	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000227;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000227;transcript_name=NA12877_ch_T0000227;gene_name=CD99P1;ID=exon:NA12877_ch_T0000227:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2146766	2175012	1000	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=NA12877_ch_T0000228;Name=CD99P1
NA12877_chrY	CAT	exon	2146766	2147438	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=exon:NA12877_ch_T0000228:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=intron:NA12877_ch_T0000228:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=exon:NA12877_ch_T0000228:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=intron:NA12877_ch_T0000228:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=exon:NA12877_ch_T0000228:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=intron:NA12877_ch_T0000228:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=exon:NA12877_ch_T0000228:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=intron:NA12877_ch_T0000228:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=exon:NA12877_ch_T0000228:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=intron:NA12877_ch_T0000228:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=exon:NA12877_ch_T0000228:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=intron:NA12877_ch_T0000228:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=exon:NA12877_ch_T0000228:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=intron:NA12877_ch_T0000228:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175012	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000228;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000228;transcript_name=NA12877_ch_T0000228;gene_name=CD99P1;ID=exon:NA12877_ch_T0000228:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2151454	2175015	1000	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=NA12877_ch_T0000230;Name=CD99P1
NA12877_chrY	CAT	exon	2151454	2151518	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=exon:NA12877_ch_T0000230:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2151519	2152206	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=intron:NA12877_ch_T0000230:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=exon:NA12877_ch_T0000230:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=intron:NA12877_ch_T0000230:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=exon:NA12877_ch_T0000230:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=intron:NA12877_ch_T0000230:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=exon:NA12877_ch_T0000230:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=intron:NA12877_ch_T0000230:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=exon:NA12877_ch_T0000230:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=intron:NA12877_ch_T0000230:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=exon:NA12877_ch_T0000230:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=intron:NA12877_ch_T0000230:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175015	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000230;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000230;transcript_name=NA12877_ch_T0000230;gene_name=CD99P1;ID=exon:NA12877_ch_T0000230:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2151459	2175008	1000	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=NA12877_ch_T0000231;Name=CD99P1
NA12877_chrY	CAT	exon	2151459	2151518	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=exon:NA12877_ch_T0000231:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2151519	2152206	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=intron:NA12877_ch_T0000231:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=exon:NA12877_ch_T0000231:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=intron:NA12877_ch_T0000231:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=exon:NA12877_ch_T0000231:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=intron:NA12877_ch_T0000231:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=exon:NA12877_ch_T0000231:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=intron:NA12877_ch_T0000231:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=exon:NA12877_ch_T0000231:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=intron:NA12877_ch_T0000231:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=exon:NA12877_ch_T0000231:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=intron:NA12877_ch_T0000231:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=exon:NA12877_ch_T0000231:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=intron:NA12877_ch_T0000231:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000231;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000231;transcript_name=NA12877_ch_T0000231;gene_name=CD99P1;ID=exon:NA12877_ch_T0000231:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2151478	2175014	1000	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=NA12877_ch_T0000232;Name=CD99P1
NA12877_chrY	CAT	exon	2151478	2151518	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=exon:NA12877_ch_T0000232:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2151519	2152206	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=intron:NA12877_ch_T0000232:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152390	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=exon:NA12877_ch_T0000232:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152391	2155130	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=intron:NA12877_ch_T0000232:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=exon:NA12877_ch_T0000232:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=intron:NA12877_ch_T0000232:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=exon:NA12877_ch_T0000232:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=intron:NA12877_ch_T0000232:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=exon:NA12877_ch_T0000232:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=intron:NA12877_ch_T0000232:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=exon:NA12877_ch_T0000232:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=intron:NA12877_ch_T0000232:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175014	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000232;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000232;transcript_name=NA12877_ch_T0000232;gene_name=CD99P1;ID=exon:NA12877_ch_T0000232:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2153010	2175373	1000	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000233;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000233;gene_name=CD99P1;ID=NA12877_ch_T0000233;Name=CD99P1
NA12877_chrY	CAT	exon	2153010	2155175	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000233;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000233;transcript_name=NA12877_ch_T0000233;gene_name=CD99P1;ID=exon:NA12877_ch_T0000233:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000233;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000233;transcript_name=NA12877_ch_T0000233;gene_name=CD99P1;ID=intron:NA12877_ch_T0000233:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000233;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000233;transcript_name=NA12877_ch_T0000233;gene_name=CD99P1;ID=exon:NA12877_ch_T0000233:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000233;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000233;transcript_name=NA12877_ch_T0000233;gene_name=CD99P1;ID=intron:NA12877_ch_T0000233:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000233;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000233;transcript_name=NA12877_ch_T0000233;gene_name=CD99P1;ID=exon:NA12877_ch_T0000233:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000233;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000233;transcript_name=NA12877_ch_T0000233;gene_name=CD99P1;ID=intron:NA12877_ch_T0000233:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000233;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000233;transcript_name=NA12877_ch_T0000233;gene_name=CD99P1;ID=exon:NA12877_ch_T0000233:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000233;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000233;transcript_name=NA12877_ch_T0000233;gene_name=CD99P1;ID=intron:NA12877_ch_T0000233:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175373	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000233;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000233;transcript_name=NA12877_ch_T0000233;gene_name=CD99P1;ID=exon:NA12877_ch_T0000233:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2155091	2175008	1000	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000234;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000234;gene_name=CD99P1;ID=NA12877_ch_T0000234;Name=CD99P1
NA12877_chrY	CAT	exon	2155091	2155175	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000234;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000234;transcript_name=NA12877_ch_T0000234;gene_name=CD99P1;ID=exon:NA12877_ch_T0000234:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000234;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000234;transcript_name=NA12877_ch_T0000234;gene_name=CD99P1;ID=intron:NA12877_ch_T0000234:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000234;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000234;transcript_name=NA12877_ch_T0000234;gene_name=CD99P1;ID=exon:NA12877_ch_T0000234:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000234;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000234;transcript_name=NA12877_ch_T0000234;gene_name=CD99P1;ID=intron:NA12877_ch_T0000234:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000234;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000234;transcript_name=NA12877_ch_T0000234;gene_name=CD99P1;ID=exon:NA12877_ch_T0000234:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000234;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000234;transcript_name=NA12877_ch_T0000234;gene_name=CD99P1;ID=intron:NA12877_ch_T0000234:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000234;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000234;transcript_name=NA12877_ch_T0000234;gene_name=CD99P1;ID=exon:NA12877_ch_T0000234:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000234;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000234;transcript_name=NA12877_ch_T0000234;gene_name=CD99P1;ID=intron:NA12877_ch_T0000234:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000234;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000234;transcript_name=NA12877_ch_T0000234;gene_name=CD99P1;ID=exon:NA12877_ch_T0000234:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000234;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000234;transcript_name=NA12877_ch_T0000234;gene_name=CD99P1;ID=intron:NA12877_ch_T0000234:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000234;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000234;transcript_name=NA12877_ch_T0000234;gene_name=CD99P1;ID=exon:NA12877_ch_T0000234:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2155116	2195591	1000	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000235;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000235;gene_name=CD99P1;ID=NA12877_ch_T0000235;Name=CD99P1
NA12877_chrY	CAT	exon	2155116	2155175	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000235;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000235;transcript_name=NA12877_ch_T0000235;gene_name=CD99P1;ID=exon:NA12877_ch_T0000235:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000235;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000235;transcript_name=NA12877_ch_T0000235;gene_name=CD99P1;ID=intron:NA12877_ch_T0000235:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000235;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000235;transcript_name=NA12877_ch_T0000235;gene_name=CD99P1;ID=exon:NA12877_ch_T0000235:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159779	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000235;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000235;transcript_name=NA12877_ch_T0000235;gene_name=CD99P1;ID=intron:NA12877_ch_T0000235:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000235;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000235;transcript_name=NA12877_ch_T0000235;gene_name=CD99P1;ID=exon:NA12877_ch_T0000235:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159849	2162995	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000235;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000235;transcript_name=NA12877_ch_T0000235;gene_name=CD99P1;ID=intron:NA12877_ch_T0000235:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000235;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000235;transcript_name=NA12877_ch_T0000235;gene_name=CD99P1;ID=exon:NA12877_ch_T0000235:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2195162	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000235;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000235;transcript_name=NA12877_ch_T0000235;gene_name=CD99P1;ID=intron:NA12877_ch_T0000235:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2195163	2195591	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000235;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000235;transcript_name=NA12877_ch_T0000235;gene_name=CD99P1;ID=exon:NA12877_ch_T0000235:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2155154	2175008	1000	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000236;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_G0000039;transcript_name=NA12877_ch_T0000236;gene_name=CD99P1;ID=NA12877_ch_T0000236;Name=CD99P1
NA12877_chrY	CAT	exon	2155154	2155175	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000236;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000236;transcript_name=NA12877_ch_T0000236;gene_name=CD99P1;ID=exon:NA12877_ch_T0000236:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000236;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000236;transcript_name=NA12877_ch_T0000236;gene_name=CD99P1;ID=intron:NA12877_ch_T0000236:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000236;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000236;transcript_name=NA12877_ch_T0000236;gene_name=CD99P1;ID=exon:NA12877_ch_T0000236:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2162995	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000236;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000236;transcript_name=NA12877_ch_T0000236;gene_name=CD99P1;ID=intron:NA12877_ch_T0000236:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2162996	2163041	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000236;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000236;transcript_name=NA12877_ch_T0000236;gene_name=CD99P1;ID=exon:NA12877_ch_T0000236:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2163042	2174652	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000236;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000236;transcript_name=NA12877_ch_T0000236;gene_name=CD99P1;ID=intron:NA12877_ch_T0000236:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2174653	2175008	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000236;gene_id=NA12877_ch_G0000039;Parent=NA12877_ch_T0000236;transcript_name=NA12877_ch_T0000236;gene_name=CD99P1;ID=exon:NA12877_ch_T0000236:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2145617	2145680	.	+	.	source_gene_common_name=MIR6089;source_gene=ENSG00000292346.1;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;gene_id=NA12877_ch_G0000040;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=NA12877_ch_G0000040;Name=MIR6089
NA12877_chrY	CAT	transcript	2145617	2145680	1000	+	.	source_transcript=ENST00000711167.1;source_transcript_name=MIR6089-202;source_gene=ENSG00000292346.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292346.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711167.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711167.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;transcript_id=NA12877_ch_T0000183;gene_id=NA12877_ch_G0000040;Parent=NA12877_ch_G0000040;transcript_name=NA12877_ch_T0000183;gene_name=MIR6089;ID=NA12877_ch_T0000183;Name=MIR6089
NA12877_chrY	CAT	exon	2145617	2145680	.	+	.	source_transcript=ENST00000711167.1;source_transcript_name=MIR6089-202;source_gene=ENSG00000292346.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292346.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711167.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711167.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;transcript_id=NA12877_ch_T0000183;gene_id=NA12877_ch_G0000040;Parent=NA12877_ch_T0000183;transcript_name=NA12877_ch_T0000183;gene_name=MIR6089;ID=exon:NA12877_ch_T0000183:0;Name=MIR6089;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2145830	2159848	.	+	.	source_gene_common_name=CD99P1;source_gene=ENSG00000292361.1;gene_id=NA12877_ch_G0000041;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=NA12877_ch_G0000041;Name=CD99P1
NA12877_chrY	CAT	transcript	2145830	2159848	1000	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_G0000041;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=NA12877_ch_T0000219;Name=CD99P1
NA12877_chrY	CAT	exon	2145830	2145895	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=exon:NA12877_ch_T0000219:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2145896	2147395	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=intron:NA12877_ch_T0000219:0;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2147396	2147438	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=exon:NA12877_ch_T0000219:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2147439	2148541	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=intron:NA12877_ch_T0000219:1;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2148542	2148610	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=exon:NA12877_ch_T0000219:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2148611	2152206	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=intron:NA12877_ch_T0000219:2;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2152207	2152360	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=exon:NA12877_ch_T0000219:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2152361	2155130	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=intron:NA12877_ch_T0000219:3;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155131	2155175	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=exon:NA12877_ch_T0000219:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155176	2155819	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=intron:NA12877_ch_T0000219:4;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2155820	2155888	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=exon:NA12877_ch_T0000219:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2155889	2159084	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=intron:NA12877_ch_T0000219:5;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159085	2159129	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=exon:NA12877_ch_T0000219:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2159130	2159779	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=intron:NA12877_ch_T0000219:6;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2159780	2159848	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=NA12877_ch_T0000219;gene_id=NA12877_ch_G0000041;Parent=NA12877_ch_T0000219;transcript_name=NA12877_ch_T0000219;gene_name=CD99P1;ID=exon:NA12877_ch_T0000219:7;Name=CD99P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2149380	2151738	.	-	.	source_gene_common_name=LINC00102;source_gene=ENSG00000292347.1;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;gene_id=NA12877_ch_G0000042;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=NA12877_ch_G0000042;Name=LINC00102
NA12877_chrY	CAT	transcript	2149380	2151738	1000	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=299.925;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=NA12877_ch_T0000229;gene_id=NA12877_ch_G0000042;Parent=NA12877_ch_G0000042;transcript_name=NA12877_ch_T0000229;gene_name=LINC00102;ID=NA12877_ch_T0000229;Name=LINC00102
NA12877_chrY	CAT	exon	2149380	2150088	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=299.925;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=NA12877_ch_T0000229;gene_id=NA12877_ch_G0000042;Parent=NA12877_ch_T0000229;transcript_name=NA12877_ch_T0000229;gene_name=LINC00102;ID=exon:NA12877_ch_T0000229:0;Name=LINC00102;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2150089	2151107	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=299.925;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=NA12877_ch_T0000229;gene_id=NA12877_ch_G0000042;Parent=NA12877_ch_T0000229;transcript_name=NA12877_ch_T0000229;gene_name=LINC00102;ID=intron:NA12877_ch_T0000229:0;Name=LINC00102;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2151108	2151738	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=299.925;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=NA12877_ch_T0000229;gene_id=NA12877_ch_G0000042;Parent=NA12877_ch_T0000229;transcript_name=NA12877_ch_T0000229;gene_name=LINC00102;ID=exon:NA12877_ch_T0000229:1;Name=LINC00102;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2227406	2277533	.	+	.	source_gene_common_name=CD99;source_gene=ENSG00000292348.1;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;gene_id=NA12877_ch_G0000043;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff;ID=NA12877_ch_G0000043;Name=CD99
NA12877_chrY	CAT	transcript	2227406	2277524	100	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=NA12877_ch_T0000237;Name=CD99
NA12877_chrY	CAT	exon	2227406	2227646	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=exon:NA12877_ch_T0000237:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2227580	2227646	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=CDS:NA12877_ch_T0000237:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2227580	2227582	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=start_codon:NA12877_ch_T0000237;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2227647	2250644	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=intron:NA12877_ch_T0000237:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2250645	2250677	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=exon:NA12877_ch_T0000237:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2250645	2250677	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=CDS:NA12877_ch_T0000237:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2250678	2253829	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=intron:NA12877_ch_T0000237:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2253830	2253877	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=exon:NA12877_ch_T0000237:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2253830	2253877	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=CDS:NA12877_ch_T0000237:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2253878	2255883	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=intron:NA12877_ch_T0000237:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2255884	2255928	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=exon:NA12877_ch_T0000237:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2255884	2255928	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=CDS:NA12877_ch_T0000237:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2255929	2256578	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=intron:NA12877_ch_T0000237:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2256579	2256647	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=exon:NA12877_ch_T0000237:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2256579	2256647	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=CDS:NA12877_ch_T0000237:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2256648	2258850	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=intron:NA12877_ch_T0000237:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2258851	2258898	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=exon:NA12877_ch_T0000237:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2258851	2258898	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=CDS:NA12877_ch_T0000237:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2258899	2259537	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=intron:NA12877_ch_T0000237:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2259538	2259588	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=exon:NA12877_ch_T0000237:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2259538	2259588	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=CDS:NA12877_ch_T0000237:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2259589	2262484	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=intron:NA12877_ch_T0000237:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2262485	2262598	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=exon:NA12877_ch_T0000237:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2262485	2262598	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=CDS:NA12877_ch_T0000237:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2262599	2269579	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=intron:NA12877_ch_T0000237:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2269580	2269597	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=exon:NA12877_ch_T0000237:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2269580	2269587	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=CDS:NA12877_ch_T0000237:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2269585	2269587	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=stop_codon:NA12877_ch_T0000237;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2269598	2274426	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=intron:NA12877_ch_T0000237:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2274427	2274480	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=exon:NA12877_ch_T0000237:9;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2274481	2277001	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=intron:NA12877_ch_T0000237:9;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2277002	2277524	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=NA12877_ch_T0000237;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000237;transcript_name=NA12877_ch_T0000237;gene_name=CD99;ID=exon:NA12877_ch_T0000237:10;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2227495	2277324	100	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=NA12877_ch_T0000238;Name=CD99
NA12877_chrY	CAT	exon	2227495	2227646	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=exon:NA12877_ch_T0000238:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2227580	2227646	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=CDS:NA12877_ch_T0000238:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2227580	2227582	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=start_codon:NA12877_ch_T0000238;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2227647	2250644	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=intron:NA12877_ch_T0000238:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2250645	2250677	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=exon:NA12877_ch_T0000238:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2250645	2250677	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=CDS:NA12877_ch_T0000238:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2250678	2255883	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=intron:NA12877_ch_T0000238:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2255884	2255928	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=exon:NA12877_ch_T0000238:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2255884	2255928	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=CDS:NA12877_ch_T0000238:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2255929	2256578	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=intron:NA12877_ch_T0000238:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2256579	2256647	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=exon:NA12877_ch_T0000238:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2256579	2256647	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=CDS:NA12877_ch_T0000238:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2256648	2258850	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=intron:NA12877_ch_T0000238:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2258851	2258898	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=exon:NA12877_ch_T0000238:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2258851	2258898	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=CDS:NA12877_ch_T0000238:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2258899	2259537	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=intron:NA12877_ch_T0000238:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2259538	2259588	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=exon:NA12877_ch_T0000238:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2259538	2259588	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=CDS:NA12877_ch_T0000238:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2259589	2262484	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=intron:NA12877_ch_T0000238:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2262485	2262598	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=exon:NA12877_ch_T0000238:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2262485	2262598	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=CDS:NA12877_ch_T0000238:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2262599	2274423	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=intron:NA12877_ch_T0000238:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2274424	2274480	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=exon:NA12877_ch_T0000238:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2274424	2274480	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=CDS:NA12877_ch_T0000238:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2274481	2277001	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=intron:NA12877_ch_T0000238:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2277002	2277324	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=exon:NA12877_ch_T0000238:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2277002	2277027	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=CDS:NA12877_ch_T0000238:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2277025	2277027	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=NA12877_ch_T0000238;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000238;transcript_name=NA12877_ch_T0000238;gene_name=CD99;ID=stop_codon:NA12877_ch_T0000238;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2227499	2269890	100	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=NA12877_ch_T0000239;Name=CD99
NA12877_chrY	CAT	exon	2227499	2227646	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=exon:NA12877_ch_T0000239:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2227580	2227646	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=CDS:NA12877_ch_T0000239:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2227580	2227582	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=start_codon:NA12877_ch_T0000239;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2227647	2250644	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=intron:NA12877_ch_T0000239:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2250645	2250677	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=exon:NA12877_ch_T0000239:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2250645	2250677	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=CDS:NA12877_ch_T0000239:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2250678	2253829	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=intron:NA12877_ch_T0000239:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2253830	2253877	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=exon:NA12877_ch_T0000239:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2253830	2253877	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=CDS:NA12877_ch_T0000239:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2253878	2255883	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=intron:NA12877_ch_T0000239:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2255884	2255928	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=exon:NA12877_ch_T0000239:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2255884	2255928	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=CDS:NA12877_ch_T0000239:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2255929	2256578	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=intron:NA12877_ch_T0000239:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2256579	2256647	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=exon:NA12877_ch_T0000239:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2256579	2256647	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=CDS:NA12877_ch_T0000239:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2256648	2258850	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=intron:NA12877_ch_T0000239:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2258851	2258898	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=exon:NA12877_ch_T0000239:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2258851	2258898	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=CDS:NA12877_ch_T0000239:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2258899	2259537	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=intron:NA12877_ch_T0000239:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2259538	2259588	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=exon:NA12877_ch_T0000239:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2259538	2259588	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=CDS:NA12877_ch_T0000239:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2259589	2262484	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=intron:NA12877_ch_T0000239:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2262485	2262598	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=exon:NA12877_ch_T0000239:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2262485	2262598	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=CDS:NA12877_ch_T0000239:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2262599	2263517	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=intron:NA12877_ch_T0000239:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2263518	2263568	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=exon:NA12877_ch_T0000239:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2263518	2263568	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=CDS:NA12877_ch_T0000239:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2263569	2269579	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=intron:NA12877_ch_T0000239:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2269580	2269890	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=exon:NA12877_ch_T0000239:9;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2269580	2269587	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=CDS:NA12877_ch_T0000239:9;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2269585	2269587	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=NA12877_ch_T0000239;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000239;transcript_name=NA12877_ch_T0000239;gene_name=CD99;ID=stop_codon:NA12877_ch_T0000239;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2227511	2254240	1000	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=NA12877_ch_T0000240;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000240;gene_name=CD99;ID=NA12877_ch_T0000240;Name=CD99
NA12877_chrY	CAT	exon	2227511	2227646	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=NA12877_ch_T0000240;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000240;transcript_name=NA12877_ch_T0000240;gene_name=CD99;ID=exon:NA12877_ch_T0000240:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2227647	2250644	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=NA12877_ch_T0000240;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000240;transcript_name=NA12877_ch_T0000240;gene_name=CD99;ID=intron:NA12877_ch_T0000240:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2250645	2250677	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=NA12877_ch_T0000240;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000240;transcript_name=NA12877_ch_T0000240;gene_name=CD99;ID=exon:NA12877_ch_T0000240:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2250678	2253829	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=NA12877_ch_T0000240;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000240;transcript_name=NA12877_ch_T0000240;gene_name=CD99;ID=intron:NA12877_ch_T0000240:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2253830	2254240	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=NA12877_ch_T0000240;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000240;transcript_name=NA12877_ch_T0000240;gene_name=CD99;ID=exon:NA12877_ch_T0000240:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2227514	2277533	100	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=NA12877_ch_T0000241;Name=CD99
NA12877_chrY	CAT	exon	2227514	2227646	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=exon:NA12877_ch_T0000241:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2227580	2227646	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=CDS:NA12877_ch_T0000241:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2227580	2227582	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=start_codon:NA12877_ch_T0000241;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2227647	2250644	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=intron:NA12877_ch_T0000241:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2250645	2250677	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=exon:NA12877_ch_T0000241:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2250645	2250677	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=CDS:NA12877_ch_T0000241:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2250678	2253829	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=intron:NA12877_ch_T0000241:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2253830	2253877	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=exon:NA12877_ch_T0000241:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2253830	2253877	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=CDS:NA12877_ch_T0000241:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2253878	2255883	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=intron:NA12877_ch_T0000241:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2255884	2255928	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=exon:NA12877_ch_T0000241:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2255884	2255928	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=CDS:NA12877_ch_T0000241:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2255929	2256578	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=intron:NA12877_ch_T0000241:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2256579	2256647	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=exon:NA12877_ch_T0000241:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2256579	2256647	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=CDS:NA12877_ch_T0000241:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2256648	2258850	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=intron:NA12877_ch_T0000241:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2258851	2258898	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=exon:NA12877_ch_T0000241:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2258851	2258898	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=CDS:NA12877_ch_T0000241:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2258899	2259537	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=intron:NA12877_ch_T0000241:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2259538	2259588	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=exon:NA12877_ch_T0000241:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2259538	2259588	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=CDS:NA12877_ch_T0000241:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2259589	2262484	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=intron:NA12877_ch_T0000241:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2262485	2262598	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=exon:NA12877_ch_T0000241:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2262485	2262598	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=CDS:NA12877_ch_T0000241:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2262599	2274423	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=intron:NA12877_ch_T0000241:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2274424	2274480	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=exon:NA12877_ch_T0000241:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2274424	2274480	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=CDS:NA12877_ch_T0000241:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2274481	2277001	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=intron:NA12877_ch_T0000241:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2277002	2277533	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=exon:NA12877_ch_T0000241:9;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2277002	2277027	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=CDS:NA12877_ch_T0000241:9;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2277025	2277027	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=NA12877_ch_T0000241;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000241;transcript_name=NA12877_ch_T0000241;gene_name=CD99;ID=stop_codon:NA12877_ch_T0000241;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2227514	2259658	1000	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=NA12877_ch_T0000242;Name=CD99
NA12877_chrY	CAT	exon	2227514	2227646	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=exon:NA12877_ch_T0000242:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2227647	2250644	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=intron:NA12877_ch_T0000242:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2250645	2250677	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=exon:NA12877_ch_T0000242:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2250678	2253829	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=intron:NA12877_ch_T0000242:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2253830	2253877	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=exon:NA12877_ch_T0000242:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2253878	2255883	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=intron:NA12877_ch_T0000242:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2255884	2255928	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=exon:NA12877_ch_T0000242:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2255929	2256578	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=intron:NA12877_ch_T0000242:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2256579	2256647	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=exon:NA12877_ch_T0000242:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2256648	2258850	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=intron:NA12877_ch_T0000242:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2258851	2258898	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=exon:NA12877_ch_T0000242:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2258899	2259537	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=intron:NA12877_ch_T0000242:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2259538	2259658	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=NA12877_ch_T0000242;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000242;transcript_name=NA12877_ch_T0000242;gene_name=CD99;ID=exon:NA12877_ch_T0000242:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2227529	2269895	100	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=NA12877_ch_T0000243;Name=CD99
NA12877_chrY	CAT	exon	2227529	2227646	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=exon:NA12877_ch_T0000243:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2227580	2227646	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=CDS:NA12877_ch_T0000243:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2227580	2227582	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=start_codon:NA12877_ch_T0000243;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2227647	2250644	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=intron:NA12877_ch_T0000243:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2250645	2250677	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=exon:NA12877_ch_T0000243:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2250645	2250677	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=CDS:NA12877_ch_T0000243:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2250678	2253829	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=intron:NA12877_ch_T0000243:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2253830	2253877	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=exon:NA12877_ch_T0000243:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2253830	2253877	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=CDS:NA12877_ch_T0000243:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2253878	2255883	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=intron:NA12877_ch_T0000243:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2255884	2255928	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=exon:NA12877_ch_T0000243:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2255884	2255928	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=CDS:NA12877_ch_T0000243:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2255929	2256578	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=intron:NA12877_ch_T0000243:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2256579	2256647	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=exon:NA12877_ch_T0000243:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2256579	2256647	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=CDS:NA12877_ch_T0000243:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2256648	2258850	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=intron:NA12877_ch_T0000243:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2258851	2258898	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=exon:NA12877_ch_T0000243:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2258851	2258898	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=CDS:NA12877_ch_T0000243:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2258899	2259537	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=intron:NA12877_ch_T0000243:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2259538	2259588	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=exon:NA12877_ch_T0000243:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2259538	2259588	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=CDS:NA12877_ch_T0000243:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2259589	2262484	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=intron:NA12877_ch_T0000243:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2262485	2262598	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=exon:NA12877_ch_T0000243:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2262485	2262598	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=CDS:NA12877_ch_T0000243:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2262599	2269579	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=intron:NA12877_ch_T0000243:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2269580	2269895	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=exon:NA12877_ch_T0000243:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2269580	2269587	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=CDS:NA12877_ch_T0000243:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2269585	2269587	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=NA12877_ch_T0000243;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000243;transcript_name=NA12877_ch_T0000243;gene_name=CD99;ID=stop_codon:NA12877_ch_T0000243;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2227532	2277514	100	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=NA12877_ch_T0000244;Name=CD99
NA12877_chrY	CAT	exon	2227532	2227646	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=exon:NA12877_ch_T0000244:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2227580	2227646	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=CDS:NA12877_ch_T0000244:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2227580	2227582	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=start_codon:NA12877_ch_T0000244;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2227647	2250644	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=intron:NA12877_ch_T0000244:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2250645	2250677	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=exon:NA12877_ch_T0000244:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2250645	2250677	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=CDS:NA12877_ch_T0000244:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2250678	2253829	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=intron:NA12877_ch_T0000244:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2253830	2253877	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=exon:NA12877_ch_T0000244:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2253830	2253877	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=CDS:NA12877_ch_T0000244:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2253878	2255883	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=intron:NA12877_ch_T0000244:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2255884	2255928	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=exon:NA12877_ch_T0000244:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2255884	2255928	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=CDS:NA12877_ch_T0000244:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2255929	2256578	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=intron:NA12877_ch_T0000244:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2256579	2256647	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=exon:NA12877_ch_T0000244:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2256579	2256647	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=CDS:NA12877_ch_T0000244:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2256648	2258850	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=intron:NA12877_ch_T0000244:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2258851	2258898	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=exon:NA12877_ch_T0000244:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2258851	2258898	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=CDS:NA12877_ch_T0000244:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2258899	2259537	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=intron:NA12877_ch_T0000244:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2259538	2259588	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=exon:NA12877_ch_T0000244:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2259538	2259588	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=CDS:NA12877_ch_T0000244:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2259589	2262484	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=intron:NA12877_ch_T0000244:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2262485	2262598	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=exon:NA12877_ch_T0000244:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2262485	2262598	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=CDS:NA12877_ch_T0000244:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2262599	2274426	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=intron:NA12877_ch_T0000244:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2274427	2274480	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=exon:NA12877_ch_T0000244:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2274427	2274480	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=CDS:NA12877_ch_T0000244:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2274481	2277001	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=intron:NA12877_ch_T0000244:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2277002	2277514	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=exon:NA12877_ch_T0000244:9;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2277002	2277027	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=CDS:NA12877_ch_T0000244:9;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2277025	2277027	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=NA12877_ch_T0000244;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000244;transcript_name=NA12877_ch_T0000244;gene_name=CD99;ID=stop_codon:NA12877_ch_T0000244;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2227545	2251820	1000	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=NA12877_ch_T0000245;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000245;gene_name=CD99;ID=NA12877_ch_T0000245;Name=CD99
NA12877_chrY	CAT	exon	2227545	2227646	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=NA12877_ch_T0000245;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000245;transcript_name=NA12877_ch_T0000245;gene_name=CD99;ID=exon:NA12877_ch_T0000245:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2227647	2250644	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=NA12877_ch_T0000245;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000245;transcript_name=NA12877_ch_T0000245;gene_name=CD99;ID=intron:NA12877_ch_T0000245:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2250645	2251820	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=NA12877_ch_T0000245;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000245;transcript_name=NA12877_ch_T0000245;gene_name=CD99;ID=exon:NA12877_ch_T0000245:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2227580	2228472	100	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=NA12877_ch_T0000246;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000246;gene_name=CD99;ID=NA12877_ch_T0000246;Name=CD99
NA12877_chrY	CAT	exon	2227580	2227646	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=NA12877_ch_T0000246;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000246;transcript_name=NA12877_ch_T0000246;gene_name=CD99;ID=exon:NA12877_ch_T0000246:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2227580	2227646	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=NA12877_ch_T0000246;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000246;transcript_name=NA12877_ch_T0000246;gene_name=CD99;ID=CDS:NA12877_ch_T0000246:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2227580	2227582	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=NA12877_ch_T0000246;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000246;transcript_name=NA12877_ch_T0000246;gene_name=CD99;ID=start_codon:NA12877_ch_T0000246;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2227647	2228006	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=NA12877_ch_T0000246;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000246;transcript_name=NA12877_ch_T0000246;gene_name=CD99;ID=intron:NA12877_ch_T0000246:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2228007	2228472	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=NA12877_ch_T0000246;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000246;transcript_name=NA12877_ch_T0000246;gene_name=CD99;ID=exon:NA12877_ch_T0000246:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2228007	2228170	.	+	2	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=NA12877_ch_T0000246;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000246;transcript_name=NA12877_ch_T0000246;gene_name=CD99;ID=CDS:NA12877_ch_T0000246:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2228168	2228170	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=NA12877_ch_T0000246;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000246;transcript_name=NA12877_ch_T0000246;gene_name=CD99;ID=stop_codon:NA12877_ch_T0000246;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2227580	2277027	1000	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=NA12877_ch_T0000247;Name=CD99
NA12877_chrY	CAT	exon	2227580	2227646	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=exon:NA12877_ch_T0000247:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2227580	2227646	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=CDS:NA12877_ch_T0000247:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2227580	2227582	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=start_codon:NA12877_ch_T0000247;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2227647	2250644	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=intron:NA12877_ch_T0000247:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2250645	2250677	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=exon:NA12877_ch_T0000247:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2250645	2250677	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=CDS:NA12877_ch_T0000247:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2250678	2253829	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=intron:NA12877_ch_T0000247:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2253830	2253877	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=exon:NA12877_ch_T0000247:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2253830	2253877	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=CDS:NA12877_ch_T0000247:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2253878	2255883	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=intron:NA12877_ch_T0000247:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2255884	2255928	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=exon:NA12877_ch_T0000247:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2255884	2255928	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=CDS:NA12877_ch_T0000247:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2255929	2256578	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=intron:NA12877_ch_T0000247:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2256579	2256647	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=exon:NA12877_ch_T0000247:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2256579	2256647	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=CDS:NA12877_ch_T0000247:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2256648	2258850	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=intron:NA12877_ch_T0000247:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2258851	2258898	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=exon:NA12877_ch_T0000247:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2258851	2258898	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=CDS:NA12877_ch_T0000247:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2258899	2259537	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=intron:NA12877_ch_T0000247:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2259538	2259588	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=exon:NA12877_ch_T0000247:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2259538	2259588	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=CDS:NA12877_ch_T0000247:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2259589	2262484	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=intron:NA12877_ch_T0000247:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2262485	2262598	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=exon:NA12877_ch_T0000247:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2262485	2262598	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=CDS:NA12877_ch_T0000247:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2262599	2269579	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=intron:NA12877_ch_T0000247:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2269580	2269597	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=exon:NA12877_ch_T0000247:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2269580	2269587	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=CDS:NA12877_ch_T0000247:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2269585	2269587	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=stop_codon:NA12877_ch_T0000247;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2269598	2274426	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=intron:NA12877_ch_T0000247:8;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2274427	2274480	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=exon:NA12877_ch_T0000247:9;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2274481	2277001	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=intron:NA12877_ch_T0000247:9;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2277002	2277027	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=NA12877_ch_T0000247;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000247;transcript_name=NA12877_ch_T0000247;gene_name=CD99;ID=exon:NA12877_ch_T0000247:10;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2227719	2262598	1000	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=NA12877_ch_T0000248;Name=CD99
NA12877_chrY	CAT	exon	2227719	2227914	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=exon:NA12877_ch_T0000248:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2227915	2250644	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=intron:NA12877_ch_T0000248:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2250645	2250677	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=exon:NA12877_ch_T0000248:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2250678	2253829	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=intron:NA12877_ch_T0000248:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2253830	2253877	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=exon:NA12877_ch_T0000248:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2253878	2255883	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=intron:NA12877_ch_T0000248:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2255884	2255928	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=exon:NA12877_ch_T0000248:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2255929	2256578	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=intron:NA12877_ch_T0000248:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2256579	2256647	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=exon:NA12877_ch_T0000248:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2256648	2258850	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=intron:NA12877_ch_T0000248:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2258851	2258898	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=exon:NA12877_ch_T0000248:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2258899	2259537	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=intron:NA12877_ch_T0000248:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2259538	2259588	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=exon:NA12877_ch_T0000248:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2259589	2262484	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=intron:NA12877_ch_T0000248:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2262485	2262598	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=NA12877_ch_T0000248;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000248;transcript_name=NA12877_ch_T0000248;gene_name=CD99;ID=exon:NA12877_ch_T0000248:7;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2253599	2262588	1000	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=NA12877_ch_T0000249;Name=CD99
NA12877_chrY	CAT	exon	2253599	2253699	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=exon:NA12877_ch_T0000249:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2253700	2253829	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=intron:NA12877_ch_T0000249:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2253830	2253877	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=exon:NA12877_ch_T0000249:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2253878	2255883	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=intron:NA12877_ch_T0000249:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2255884	2255928	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=exon:NA12877_ch_T0000249:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2255929	2256578	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=intron:NA12877_ch_T0000249:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2256579	2256647	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=exon:NA12877_ch_T0000249:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2256648	2258850	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=intron:NA12877_ch_T0000249:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2258851	2258898	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=exon:NA12877_ch_T0000249:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2258899	2259537	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=intron:NA12877_ch_T0000249:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2259538	2259588	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=exon:NA12877_ch_T0000249:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2259589	2262484	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=intron:NA12877_ch_T0000249:5;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2262485	2262588	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=NA12877_ch_T0000249;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000249;transcript_name=NA12877_ch_T0000249;gene_name=CD99;ID=exon:NA12877_ch_T0000249:6;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2255290	2262493	1000	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=NA12877_ch_T0000250;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000250;gene_name=CD99;ID=NA12877_ch_T0000250;Name=CD99
NA12877_chrY	CAT	exon	2255290	2255928	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=NA12877_ch_T0000250;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000250;transcript_name=NA12877_ch_T0000250;gene_name=CD99;ID=exon:NA12877_ch_T0000250:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2255929	2256578	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=NA12877_ch_T0000250;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000250;transcript_name=NA12877_ch_T0000250;gene_name=CD99;ID=intron:NA12877_ch_T0000250:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2256579	2256647	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=NA12877_ch_T0000250;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000250;transcript_name=NA12877_ch_T0000250;gene_name=CD99;ID=exon:NA12877_ch_T0000250:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2256648	2258850	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=NA12877_ch_T0000250;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000250;transcript_name=NA12877_ch_T0000250;gene_name=CD99;ID=intron:NA12877_ch_T0000250:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2258851	2258898	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=NA12877_ch_T0000250;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000250;transcript_name=NA12877_ch_T0000250;gene_name=CD99;ID=exon:NA12877_ch_T0000250:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2258899	2259537	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=NA12877_ch_T0000250;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000250;transcript_name=NA12877_ch_T0000250;gene_name=CD99;ID=intron:NA12877_ch_T0000250:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2259538	2259588	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=NA12877_ch_T0000250;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000250;transcript_name=NA12877_ch_T0000250;gene_name=CD99;ID=exon:NA12877_ch_T0000250:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2259589	2262484	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=NA12877_ch_T0000250;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000250;transcript_name=NA12877_ch_T0000250;gene_name=CD99;ID=intron:NA12877_ch_T0000250:3;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2262485	2262493	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=NA12877_ch_T0000250;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000250;transcript_name=NA12877_ch_T0000250;gene_name=CD99;ID=exon:NA12877_ch_T0000250:4;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2262566	2277349	1000	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=NA12877_ch_T0000251;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_G0000043;transcript_name=NA12877_ch_T0000251;gene_name=CD99;ID=NA12877_ch_T0000251;Name=CD99
NA12877_chrY	CAT	exon	2262566	2262598	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=NA12877_ch_T0000251;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000251;transcript_name=NA12877_ch_T0000251;gene_name=CD99;ID=exon:NA12877_ch_T0000251:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2262566	2262598	.	+	2	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=NA12877_ch_T0000251;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000251;transcript_name=NA12877_ch_T0000251;gene_name=CD99;ID=CDS:NA12877_ch_T0000251:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2262599	2274104	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=NA12877_ch_T0000251;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000251;transcript_name=NA12877_ch_T0000251;gene_name=CD99;ID=intron:NA12877_ch_T0000251:0;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2274105	2274480	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=NA12877_ch_T0000251;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000251;transcript_name=NA12877_ch_T0000251;gene_name=CD99;ID=exon:NA12877_ch_T0000251:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2274105	2274139	.	+	2	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=NA12877_ch_T0000251;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000251;transcript_name=NA12877_ch_T0000251;gene_name=CD99;ID=CDS:NA12877_ch_T0000251:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2274137	2274139	.	+	0	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=NA12877_ch_T0000251;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000251;transcript_name=NA12877_ch_T0000251;gene_name=CD99;ID=stop_codon:NA12877_ch_T0000251;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2274481	2277001	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=NA12877_ch_T0000251;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000251;transcript_name=NA12877_ch_T0000251;gene_name=CD99;ID=intron:NA12877_ch_T0000251:1;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2277002	2277349	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=NA12877_ch_T0000251;gene_id=NA12877_ch_G0000043;Parent=NA12877_ch_T0000251;transcript_name=NA12877_ch_T0000251;gene_name=CD99;ID=exon:NA12877_ch_T0000251:2;Name=CD99;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2288341	2390756	.	+	.	source_gene_common_name=XGY2;source_gene=ENSG00000290840.2;gene_id=NA12877_ch_G0000044;gene_biotype=lncRNA;gene_name=XGY2;gene_sources=liftoff;ID=NA12877_ch_G0000044;Name=XGY2
NA12877_chrY	CAT	transcript	2288341	2327035	1000	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000252;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_G0000044;transcript_name=NA12877_ch_T0000252;gene_name=XGY2;ID=NA12877_ch_T0000252;Name=XGY2
NA12877_chrY	CAT	exon	2288341	2288593	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000252;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000252;transcript_name=NA12877_ch_T0000252;gene_name=XGY2;ID=exon:NA12877_ch_T0000252:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2288594	2306798	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000252;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000252;transcript_name=NA12877_ch_T0000252;gene_name=XGY2;ID=intron:NA12877_ch_T0000252:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2306799	2306840	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000252;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000252;transcript_name=NA12877_ch_T0000252;gene_name=XGY2;ID=exon:NA12877_ch_T0000252:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2306841	2310836	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000252;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000252;transcript_name=NA12877_ch_T0000252;gene_name=XGY2;ID=intron:NA12877_ch_T0000252:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2310837	2310860	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000252;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000252;transcript_name=NA12877_ch_T0000252;gene_name=XGY2;ID=exon:NA12877_ch_T0000252:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2310861	2325862	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000252;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000252;transcript_name=NA12877_ch_T0000252;gene_name=XGY2;ID=intron:NA12877_ch_T0000252:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2325863	2327035	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000252;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000252;transcript_name=NA12877_ch_T0000252;gene_name=XGY2;ID=exon:NA12877_ch_T0000252:3;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2288554	2323748	1000	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000253;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_G0000044;transcript_name=NA12877_ch_T0000253;gene_name=XGY2;ID=NA12877_ch_T0000253;Name=XGY2
NA12877_chrY	CAT	exon	2288554	2288593	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000253;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000253;transcript_name=NA12877_ch_T0000253;gene_name=XGY2;ID=exon:NA12877_ch_T0000253:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2288594	2306798	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000253;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000253;transcript_name=NA12877_ch_T0000253;gene_name=XGY2;ID=intron:NA12877_ch_T0000253:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2306799	2306840	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000253;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000253;transcript_name=NA12877_ch_T0000253;gene_name=XGY2;ID=exon:NA12877_ch_T0000253:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2306841	2310836	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000253;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000253;transcript_name=NA12877_ch_T0000253;gene_name=XGY2;ID=intron:NA12877_ch_T0000253:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2310837	2310860	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000253;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000253;transcript_name=NA12877_ch_T0000253;gene_name=XGY2;ID=exon:NA12877_ch_T0000253:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2310861	2323108	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000253;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000253;transcript_name=NA12877_ch_T0000253;gene_name=XGY2;ID=intron:NA12877_ch_T0000253:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2323109	2323167	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000253;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000253;transcript_name=NA12877_ch_T0000253;gene_name=XGY2;ID=exon:NA12877_ch_T0000253:3;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2323168	2323593	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000253;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000253;transcript_name=NA12877_ch_T0000253;gene_name=XGY2;ID=intron:NA12877_ch_T0000253:3;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2323594	2323748	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000253;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000253;transcript_name=NA12877_ch_T0000253;gene_name=XGY2;ID=exon:NA12877_ch_T0000253:4;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2288554	2390756	1000	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000254;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_G0000044;transcript_name=NA12877_ch_T0000254;gene_name=XGY2;ID=NA12877_ch_T0000254;Name=XGY2
NA12877_chrY	CAT	exon	2288554	2288593	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000254;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000254;transcript_name=NA12877_ch_T0000254;gene_name=XGY2;ID=exon:NA12877_ch_T0000254:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2288594	2306798	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000254;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000254;transcript_name=NA12877_ch_T0000254;gene_name=XGY2;ID=intron:NA12877_ch_T0000254:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2306799	2306840	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000254;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000254;transcript_name=NA12877_ch_T0000254;gene_name=XGY2;ID=exon:NA12877_ch_T0000254:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2306841	2310836	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000254;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000254;transcript_name=NA12877_ch_T0000254;gene_name=XGY2;ID=intron:NA12877_ch_T0000254:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2310837	2310860	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000254;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000254;transcript_name=NA12877_ch_T0000254;gene_name=XGY2;ID=exon:NA12877_ch_T0000254:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2310861	2381760	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000254;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000254;transcript_name=NA12877_ch_T0000254;gene_name=XGY2;ID=intron:NA12877_ch_T0000254:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2381761	2381858	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000254;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000254;transcript_name=NA12877_ch_T0000254;gene_name=XGY2;ID=exon:NA12877_ch_T0000254:3;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2381859	2390714	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000254;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000254;transcript_name=NA12877_ch_T0000254;gene_name=XGY2;ID=intron:NA12877_ch_T0000254:3;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2390715	2390756	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000254;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000254;transcript_name=NA12877_ch_T0000254;gene_name=XGY2;ID=exon:NA12877_ch_T0000254:4;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2288554	2311117	1000	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000255;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_G0000044;transcript_name=NA12877_ch_T0000255;gene_name=XGY2;ID=NA12877_ch_T0000255;Name=XGY2
NA12877_chrY	CAT	exon	2288554	2288593	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000255;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000255;transcript_name=NA12877_ch_T0000255;gene_name=XGY2;ID=exon:NA12877_ch_T0000255:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2288594	2306798	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000255;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000255;transcript_name=NA12877_ch_T0000255;gene_name=XGY2;ID=intron:NA12877_ch_T0000255:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2306799	2306840	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000255;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000255;transcript_name=NA12877_ch_T0000255;gene_name=XGY2;ID=exon:NA12877_ch_T0000255:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2306841	2310836	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000255;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000255;transcript_name=NA12877_ch_T0000255;gene_name=XGY2;ID=intron:NA12877_ch_T0000255:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2310837	2311117	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000255;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000255;transcript_name=NA12877_ch_T0000255;gene_name=XGY2;ID=exon:NA12877_ch_T0000255:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2288554	2381804	1000	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_G0000044;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=NA12877_ch_T0000256;Name=XGY2
NA12877_chrY	CAT	exon	2288554	2288593	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=exon:NA12877_ch_T0000256:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2288594	2306798	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=intron:NA12877_ch_T0000256:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2306799	2306840	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=exon:NA12877_ch_T0000256:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2306841	2310836	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=intron:NA12877_ch_T0000256:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2310837	2310860	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=exon:NA12877_ch_T0000256:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2310861	2377142	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=intron:NA12877_ch_T0000256:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2377143	2377198	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=exon:NA12877_ch_T0000256:3;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2377199	2377600	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=intron:NA12877_ch_T0000256:3;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2377601	2377742	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=exon:NA12877_ch_T0000256:4;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2377743	2378279	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=intron:NA12877_ch_T0000256:4;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2378280	2378357	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=exon:NA12877_ch_T0000256:5;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2378358	2380191	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=intron:NA12877_ch_T0000256:5;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2380192	2380372	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=exon:NA12877_ch_T0000256:6;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2380373	2381760	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=intron:NA12877_ch_T0000256:6;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2381761	2381804	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000256;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000256;transcript_name=NA12877_ch_T0000256;gene_name=XGY2;ID=exon:NA12877_ch_T0000256:7;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2288554	2323684	1000	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000257;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_G0000044;transcript_name=NA12877_ch_T0000257;gene_name=XGY2;ID=NA12877_ch_T0000257;Name=XGY2
NA12877_chrY	CAT	exon	2288554	2288593	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000257;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000257;transcript_name=NA12877_ch_T0000257;gene_name=XGY2;ID=exon:NA12877_ch_T0000257:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2288594	2306798	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000257;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000257;transcript_name=NA12877_ch_T0000257;gene_name=XGY2;ID=intron:NA12877_ch_T0000257:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2306799	2306840	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000257;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000257;transcript_name=NA12877_ch_T0000257;gene_name=XGY2;ID=exon:NA12877_ch_T0000257:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2306841	2310836	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000257;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000257;transcript_name=NA12877_ch_T0000257;gene_name=XGY2;ID=intron:NA12877_ch_T0000257:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2310837	2310860	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000257;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000257;transcript_name=NA12877_ch_T0000257;gene_name=XGY2;ID=exon:NA12877_ch_T0000257:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2310861	2323108	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000257;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000257;transcript_name=NA12877_ch_T0000257;gene_name=XGY2;ID=intron:NA12877_ch_T0000257:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2323109	2323684	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000257;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000257;transcript_name=NA12877_ch_T0000257;gene_name=XGY2;ID=exon:NA12877_ch_T0000257:3;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2288554	2381804	1000	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_G0000044;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=NA12877_ch_T0000258;Name=XGY2
NA12877_chrY	CAT	exon	2288554	2288593	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=exon:NA12877_ch_T0000258:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2288594	2306798	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=intron:NA12877_ch_T0000258:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2306799	2306840	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=exon:NA12877_ch_T0000258:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2306841	2310836	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=intron:NA12877_ch_T0000258:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2310837	2310860	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=exon:NA12877_ch_T0000258:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2310861	2377600	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=intron:NA12877_ch_T0000258:2;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2377601	2377742	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=exon:NA12877_ch_T0000258:3;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2377743	2378279	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=intron:NA12877_ch_T0000258:3;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2378280	2378357	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=exon:NA12877_ch_T0000258:4;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2378358	2380191	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=intron:NA12877_ch_T0000258:4;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2380192	2380372	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=exon:NA12877_ch_T0000258:5;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2380373	2381760	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=intron:NA12877_ch_T0000258:5;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2381761	2381804	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000258;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000258;transcript_name=NA12877_ch_T0000258;gene_name=XGY2;ID=exon:NA12877_ch_T0000258:6;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2323109	2326876	1000	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000262;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_G0000044;transcript_name=NA12877_ch_T0000262;gene_name=XGY2;ID=NA12877_ch_T0000262;Name=XGY2
NA12877_chrY	CAT	exon	2323109	2323167	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000262;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000262;transcript_name=NA12877_ch_T0000262;gene_name=XGY2;ID=exon:NA12877_ch_T0000262:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2323168	2325862	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000262;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000262;transcript_name=NA12877_ch_T0000262;gene_name=XGY2;ID=intron:NA12877_ch_T0000262:0;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2325863	2326876	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=NA12877_ch_T0000262;gene_id=NA12877_ch_G0000044;Parent=NA12877_ch_T0000262;transcript_name=NA12877_ch_T0000262;gene_name=XGY2;ID=exon:NA12877_ch_T0000262:1;Name=XGY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2288554	2310860	.	+	.	source_gene_common_name=ENSG00000288686;source_gene=ENSG00000288686.1;gene_id=NA12877_ch_G0000045;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000288686;gene_sources=liftoff;ID=NA12877_ch_G0000045;Name=ENSG00000288686
NA12877_chrY	CAT	transcript	2288554	2310860	1000	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=NA12877_ch_T0000259;gene_id=NA12877_ch_G0000045;Parent=NA12877_ch_G0000045;transcript_name=NA12877_ch_T0000259;gene_name=ENSG00000288686;ID=NA12877_ch_T0000259;Name=ENSG00000288686
NA12877_chrY	CAT	exon	2288554	2288593	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=NA12877_ch_T0000259;gene_id=NA12877_ch_G0000045;Parent=NA12877_ch_T0000259;transcript_name=NA12877_ch_T0000259;gene_name=ENSG00000288686;ID=exon:NA12877_ch_T0000259:0;Name=ENSG00000288686;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2288594	2306798	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=NA12877_ch_T0000259;gene_id=NA12877_ch_G0000045;Parent=NA12877_ch_T0000259;transcript_name=NA12877_ch_T0000259;gene_name=ENSG00000288686;ID=intron:NA12877_ch_T0000259:0;Name=ENSG00000288686;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2306799	2306840	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=NA12877_ch_T0000259;gene_id=NA12877_ch_G0000045;Parent=NA12877_ch_T0000259;transcript_name=NA12877_ch_T0000259;gene_name=ENSG00000288686;ID=exon:NA12877_ch_T0000259:1;Name=ENSG00000288686;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2306841	2310836	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=NA12877_ch_T0000259;gene_id=NA12877_ch_G0000045;Parent=NA12877_ch_T0000259;transcript_name=NA12877_ch_T0000259;gene_name=ENSG00000288686;ID=intron:NA12877_ch_T0000259:1;Name=ENSG00000288686;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2310837	2310860	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=NA12877_ch_T0000259;gene_id=NA12877_ch_G0000045;Parent=NA12877_ch_T0000259;transcript_name=NA12877_ch_T0000259;gene_name=ENSG00000288686;ID=exon:NA12877_ch_T0000259:2;Name=ENSG00000288686;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2320863	2320967	.	+	.	source_gene_common_name=RNU6-1334P;source_gene=ENSG00000251841.1;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;gene_id=NA12877_ch_G0000046;gene_biotype=snRNA;gene_name=RNU6-1334P;gene_sources=liftoff;ID=NA12877_ch_G0000046;Name=RNU6-1334P
NA12877_chrY	CAT	transcript	2320863	2320967	1000	+	.	source_transcript=ENST00000516032.1;source_transcript_name=RNU6-1334P-201;source_gene=ENSG00000251841.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251841.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516032.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1334P;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;transcript_id=NA12877_ch_T0000260;gene_id=NA12877_ch_G0000046;Parent=NA12877_ch_G0000046;transcript_name=NA12877_ch_T0000260;gene_name=RNU6-1334P;ID=NA12877_ch_T0000260;Name=RNU6-1334P
NA12877_chrY	CAT	exon	2320863	2320967	.	+	.	source_transcript=ENST00000516032.1;source_transcript_name=RNU6-1334P-201;source_gene=ENSG00000251841.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251841.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516032.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1334P;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;transcript_id=NA12877_ch_T0000260;gene_id=NA12877_ch_G0000046;Parent=NA12877_ch_T0000260;transcript_name=NA12877_ch_T0000260;gene_name=RNU6-1334P;ID=exon:NA12877_ch_T0000260:0;Name=RNU6-1334P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2322969	2323796	.	-	.	source_gene_common_name=SRY;source_gene=ENSG00000184895.8;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;gene_id=NA12877_ch_G0000047;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff;ID=NA12877_ch_G0000047;Name=SRY
NA12877_chrY	CAT	transcript	2322969	2323796	100	-	.	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=NA12877_ch_T0000261;gene_id=NA12877_ch_G0000047;Parent=NA12877_ch_G0000047;transcript_name=NA12877_ch_T0000261;gene_name=SRY;ID=NA12877_ch_T0000261;Name=SRY
NA12877_chrY	CAT	exon	2322969	2323796	.	-	.	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=NA12877_ch_T0000261;gene_id=NA12877_ch_G0000047;Parent=NA12877_ch_T0000261;transcript_name=NA12877_ch_T0000261;gene_name=SRY;ID=exon:NA12877_ch_T0000261:0;Name=SRY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2323103	2323717	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=NA12877_ch_T0000261;gene_id=NA12877_ch_G0000047;Parent=NA12877_ch_T0000261;transcript_name=NA12877_ch_T0000261;gene_name=SRY;ID=CDS:NA12877_ch_T0000261:0;Name=SRY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2323103	2323105	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=NA12877_ch_T0000261;gene_id=NA12877_ch_G0000047;Parent=NA12877_ch_T0000261;transcript_name=NA12877_ch_T0000261;gene_name=SRY;ID=stop_codon:NA12877_ch_T0000261;Name=SRY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2323715	2323717	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=NA12877_ch_T0000261;gene_id=NA12877_ch_G0000047;Parent=NA12877_ch_T0000261;transcript_name=NA12877_ch_T0000261;gene_name=SRY;ID=start_codon:NA12877_ch_T0000261;Name=SRY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2325941	2326442	.	+	.	source_gene_common_name=RNASEH2CP1;source_gene=ENSG00000237659.1;gene_id=NA12877_ch_G0000048;gene_biotype=transcribed_processed_pseudogene;gene_name=RNASEH2CP1;gene_sources=liftoff;ID=NA12877_ch_G0000048;Name=RNASEH2CP1
NA12877_chrY	CAT	transcript	2325941	2326442	1000	+	.	source_transcript=ENST00000454281.1;source_transcript_name=RNASEH2CP1-201;source_gene=ENSG00000237659.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000237659.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000454281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454281.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNASEH2CP1;transcript_id=NA12877_ch_T0000263;gene_id=NA12877_ch_G0000048;Parent=NA12877_ch_G0000048;transcript_name=NA12877_ch_T0000263;gene_name=RNASEH2CP1;ID=NA12877_ch_T0000263;Name=RNASEH2CP1
NA12877_chrY	CAT	exon	2325941	2326442	.	+	.	source_transcript=ENST00000454281.1;source_transcript_name=RNASEH2CP1-201;source_gene=ENSG00000237659.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000237659.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000454281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454281.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNASEH2CP1;transcript_id=NA12877_ch_T0000263;gene_id=NA12877_ch_G0000048;Parent=NA12877_ch_T0000263;transcript_name=NA12877_ch_T0000263;gene_name=RNASEH2CP1;ID=exon:NA12877_ch_T0000263:0;Name=RNASEH2CP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2350446	2361593	.	+	.	source_gene_common_name=ENSG00000300312;source_gene=ENSG00000300312.1;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;gene_id=NA12877_ch_G0000049;gene_biotype=lncRNA;gene_name=ENSG00000300312;gene_sources=liftoff;ID=NA12877_ch_G0000049;Name=ENSG00000300312
NA12877_chrY	CAT	transcript	2350446	2361593	1000	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=NA12877_ch_T0000264;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_G0000049;transcript_name=NA12877_ch_T0000264;gene_name=ENSG00000300312;ID=NA12877_ch_T0000264;Name=ENSG00000300312
NA12877_chrY	CAT	exon	2350446	2350481	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=NA12877_ch_T0000264;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_T0000264;transcript_name=NA12877_ch_T0000264;gene_name=ENSG00000300312;ID=exon:NA12877_ch_T0000264:0;Name=ENSG00000300312;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2350482	2360597	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=NA12877_ch_T0000264;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_T0000264;transcript_name=NA12877_ch_T0000264;gene_name=ENSG00000300312;ID=intron:NA12877_ch_T0000264:0;Name=ENSG00000300312;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2360598	2360820	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=NA12877_ch_T0000264;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_T0000264;transcript_name=NA12877_ch_T0000264;gene_name=ENSG00000300312;ID=exon:NA12877_ch_T0000264:1;Name=ENSG00000300312;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2360821	2361300	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=NA12877_ch_T0000264;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_T0000264;transcript_name=NA12877_ch_T0000264;gene_name=ENSG00000300312;ID=intron:NA12877_ch_T0000264:1;Name=ENSG00000300312;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2361301	2361593	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=NA12877_ch_T0000264;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_T0000264;transcript_name=NA12877_ch_T0000264;gene_name=ENSG00000300312;ID=exon:NA12877_ch_T0000264:2;Name=ENSG00000300312;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2350446	2360263	1000	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=NA12877_ch_T0000265;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_G0000049;transcript_name=NA12877_ch_T0000265;gene_name=ENSG00000300312;ID=NA12877_ch_T0000265;Name=ENSG00000300312
NA12877_chrY	CAT	exon	2350446	2350481	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=NA12877_ch_T0000265;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_T0000265;transcript_name=NA12877_ch_T0000265;gene_name=ENSG00000300312;ID=exon:NA12877_ch_T0000265:0;Name=ENSG00000300312;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2350482	2359557	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=NA12877_ch_T0000265;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_T0000265;transcript_name=NA12877_ch_T0000265;gene_name=ENSG00000300312;ID=intron:NA12877_ch_T0000265:0;Name=ENSG00000300312;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2359558	2360263	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=NA12877_ch_T0000265;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_T0000265;transcript_name=NA12877_ch_T0000265;gene_name=ENSG00000300312;ID=exon:NA12877_ch_T0000265:1;Name=ENSG00000300312;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2360693	2361581	1000	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=NA12877_ch_T0000266;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_G0000049;transcript_name=NA12877_ch_T0000266;gene_name=ENSG00000300312;ID=NA12877_ch_T0000266;Name=ENSG00000300312
NA12877_chrY	CAT	exon	2360693	2360820	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=NA12877_ch_T0000266;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_T0000266;transcript_name=NA12877_ch_T0000266;gene_name=ENSG00000300312;ID=exon:NA12877_ch_T0000266:0;Name=ENSG00000300312;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2360821	2361300	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=NA12877_ch_T0000266;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_T0000266;transcript_name=NA12877_ch_T0000266;gene_name=ENSG00000300312;ID=intron:NA12877_ch_T0000266:0;Name=ENSG00000300312;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2361301	2361581	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=NA12877_ch_T0000266;gene_id=NA12877_ch_G0000049;Parent=NA12877_ch_T0000266;transcript_name=NA12877_ch_T0000266;gene_name=ENSG00000300312;ID=exon:NA12877_ch_T0000266:1;Name=ENSG00000300312;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2364097	2364333	.	+	.	source_gene_common_name=TOMM22P2;source_gene=ENSG00000232195.1;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;gene_id=NA12877_ch_G0000050;gene_biotype=processed_pseudogene;gene_name=TOMM22P2;gene_sources=liftoff;ID=NA12877_ch_G0000050;Name=TOMM22P2
NA12877_chrY	CAT	transcript	2364097	2364333	1000	+	.	source_transcript=ENST00000430735.1;source_transcript_name=TOMM22P2-201;source_gene=ENSG00000232195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430735.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P2;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;transcript_id=NA12877_ch_T0000267;gene_id=NA12877_ch_G0000050;Parent=NA12877_ch_G0000050;transcript_name=NA12877_ch_T0000267;gene_name=TOMM22P2;ID=NA12877_ch_T0000267;Name=TOMM22P2
NA12877_chrY	CAT	exon	2364097	2364333	.	+	.	source_transcript=ENST00000430735.1;source_transcript_name=TOMM22P2-201;source_gene=ENSG00000232195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430735.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P2;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;transcript_id=NA12877_ch_T0000267;gene_id=NA12877_ch_G0000050;Parent=NA12877_ch_T0000267;transcript_name=NA12877_ch_T0000267;gene_name=TOMM22P2;ID=exon:NA12877_ch_T0000267:0;Name=TOMM22P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2364307	2376966	.	-	.	source_gene_common_name=ENSG00000286130;source_gene=ENSG00000286130.1;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;gene_id=NA12877_ch_G0000051;gene_biotype=lncRNA;gene_name=ENSG00000286130;gene_sources=liftoff;ID=NA12877_ch_G0000051;Name=ENSG00000286130
NA12877_chrY	CAT	transcript	2364307	2376966	1000	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=NA12877_ch_T0000268;gene_id=NA12877_ch_G0000051;Parent=NA12877_ch_G0000051;transcript_name=NA12877_ch_T0000268;gene_name=ENSG00000286130;ID=NA12877_ch_T0000268;Name=ENSG00000286130
NA12877_chrY	CAT	exon	2364307	2364850	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=NA12877_ch_T0000268;gene_id=NA12877_ch_G0000051;Parent=NA12877_ch_T0000268;transcript_name=NA12877_ch_T0000268;gene_name=ENSG00000286130;ID=exon:NA12877_ch_T0000268:0;Name=ENSG00000286130;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2364851	2365640	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=NA12877_ch_T0000268;gene_id=NA12877_ch_G0000051;Parent=NA12877_ch_T0000268;transcript_name=NA12877_ch_T0000268;gene_name=ENSG00000286130;ID=intron:NA12877_ch_T0000268:0;Name=ENSG00000286130;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2365641	2365866	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=NA12877_ch_T0000268;gene_id=NA12877_ch_G0000051;Parent=NA12877_ch_T0000268;transcript_name=NA12877_ch_T0000268;gene_name=ENSG00000286130;ID=exon:NA12877_ch_T0000268:1;Name=ENSG00000286130;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2365867	2376585	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=NA12877_ch_T0000268;gene_id=NA12877_ch_G0000051;Parent=NA12877_ch_T0000268;transcript_name=NA12877_ch_T0000268;gene_name=ENSG00000286130;ID=intron:NA12877_ch_T0000268:1;Name=ENSG00000286130;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2376586	2376966	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=NA12877_ch_T0000268;gene_id=NA12877_ch_G0000051;Parent=NA12877_ch_T0000268;transcript_name=NA12877_ch_T0000268;gene_name=ENSG00000286130;ID=exon:NA12877_ch_T0000268:2;Name=ENSG00000286130;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2377717	2468470	.	+	.	source_gene_common_name=RPS4Y1;source_gene=ENSG00000129824.16;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;gene_id=NA12877_ch_G0000052;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff;ID=NA12877_ch_G0000052;Name=RPS4Y1
NA12877_chrY	CAT	transcript	2377717	2403383	100	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_G0000052;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=NA12877_ch_T0000269;Name=RPS4Y1
NA12877_chrY	CAT	exon	2377717	2377742	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000269:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2377740	2377742	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000269:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2377740	2377742	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=start_codon:NA12877_ch_T0000269;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2377743	2378279	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000269:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2378280	2378357	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000269:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2378280	2378357	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000269:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2378358	2380191	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000269:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2380192	2380372	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000269:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2380192	2380372	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000269:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2380373	2381760	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000269:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2381761	2381858	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000269:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2381761	2381858	.	+	2	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000269:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2381859	2390714	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000269:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2390715	2390886	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000269:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2390715	2390886	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000269:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2390887	2401202	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000269:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2401203	2401360	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000269:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2401203	2401360	.	+	2	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000269:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2401361	2402907	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000269:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2402908	2403383	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000269:6;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2402908	2403009	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000269:6;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2403007	2403009	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=NA12877_ch_T0000269;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000269;transcript_name=NA12877_ch_T0000269;gene_name=RPS4Y1;ID=stop_codon:NA12877_ch_T0000269;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2378035	2402977	100	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_G0000052;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=NA12877_ch_T0000270;Name=RPS4Y1
NA12877_chrY	CAT	exon	2378035	2378088	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000270:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2378059	2378088	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000270:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2378059	2378061	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=start_codon:NA12877_ch_T0000270;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2378089	2378279	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000270:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2378280	2378357	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000270:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2378280	2378357	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000270:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2378358	2380191	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000270:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2380192	2380372	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000270:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2380192	2380372	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000270:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2380373	2381760	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000270:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2381761	2381858	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000270:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2381761	2381858	.	+	2	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000270:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2381859	2390714	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000270:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2390715	2390886	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000270:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2390715	2390886	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000270:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2390887	2401202	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000270:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2401203	2401360	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000270:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2401203	2401360	.	+	2	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000270:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2401361	2402907	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000270:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2402908	2402977	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000270:6;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2402908	2402977	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=NA12877_ch_T0000270;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000270;transcript_name=NA12877_ch_T0000270;gene_name=RPS4Y1;ID=CDS:NA12877_ch_T0000270:6;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2390211	2403071	1000	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=NA12877_ch_T0000271;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_G0000052;transcript_name=NA12877_ch_T0000271;gene_name=RPS4Y1;ID=NA12877_ch_T0000271;Name=RPS4Y1
NA12877_chrY	CAT	exon	2390211	2390886	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=NA12877_ch_T0000271;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000271;transcript_name=NA12877_ch_T0000271;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000271:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2390887	2401202	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=NA12877_ch_T0000271;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000271;transcript_name=NA12877_ch_T0000271;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000271:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2401203	2401360	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=NA12877_ch_T0000271;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000271;transcript_name=NA12877_ch_T0000271;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000271:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2401361	2402907	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=NA12877_ch_T0000271;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000271;transcript_name=NA12877_ch_T0000271;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000271:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2402908	2403071	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=NA12877_ch_T0000271;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000271;transcript_name=NA12877_ch_T0000271;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000271:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2390845	2468470	1000	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=NA12877_ch_T0000272;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_G0000052;transcript_name=NA12877_ch_T0000272;gene_name=RPS4Y1;ID=NA12877_ch_T0000272;Name=RPS4Y1
NA12877_chrY	CAT	exon	2390845	2390886	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=NA12877_ch_T0000272;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000272;transcript_name=NA12877_ch_T0000272;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000272:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2390887	2465333	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=NA12877_ch_T0000272;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000272;transcript_name=NA12877_ch_T0000272;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000272:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2465334	2465455	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=NA12877_ch_T0000272;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000272;transcript_name=NA12877_ch_T0000272;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000272:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2465456	2468180	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=NA12877_ch_T0000272;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000272;transcript_name=NA12877_ch_T0000272;gene_name=RPS4Y1;ID=intron:NA12877_ch_T0000272:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2468181	2468470	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=NA12877_ch_T0000272;gene_id=NA12877_ch_G0000052;Parent=NA12877_ch_T0000272;transcript_name=NA12877_ch_T0000272;gene_name=RPS4Y1;ID=exon:NA12877_ch_T0000272:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2417798	2419767	.	-	.	source_gene_common_name=HSFY3P;source_gene=ENSG00000227289.3;gene_id=NA12877_ch_G0000053;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY3P;gene_sources=liftoff;ID=NA12877_ch_G0000053;Name=HSFY3P
NA12877_chrY	CAT	transcript	2417798	2419767	1000	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=NA12877_ch_T0000273;gene_id=NA12877_ch_G0000053;Parent=NA12877_ch_G0000053;transcript_name=NA12877_ch_T0000273;gene_name=HSFY3P;ID=NA12877_ch_T0000273;Name=HSFY3P
NA12877_chrY	CAT	exon	2417798	2418476	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=NA12877_ch_T0000273;gene_id=NA12877_ch_G0000053;Parent=NA12877_ch_T0000273;transcript_name=NA12877_ch_T0000273;gene_name=HSFY3P;ID=exon:NA12877_ch_T0000273:0;Name=HSFY3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2418477	2419255	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=NA12877_ch_T0000273;gene_id=NA12877_ch_G0000053;Parent=NA12877_ch_T0000273;transcript_name=NA12877_ch_T0000273;gene_name=HSFY3P;ID=intron:NA12877_ch_T0000273:0;Name=HSFY3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2419256	2419767	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=NA12877_ch_T0000273;gene_id=NA12877_ch_G0000053;Parent=NA12877_ch_T0000273;transcript_name=NA12877_ch_T0000273;gene_name=HSFY3P;ID=exon:NA12877_ch_T0000273:1;Name=HSFY3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2419225	2426666	.	-	.	source_gene_common_name=ENSG00000290841;source_gene=ENSG00000290841.1;gene_id=NA12877_ch_G0000054;gene_biotype=lncRNA;gene_name=ENSG00000290841;gene_sources=liftoff;ID=NA12877_ch_G0000054;Name=ENSG00000290841
NA12877_chrY	CAT	transcript	2419225	2426666	1000	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=NA12877_ch_T0000274;gene_id=NA12877_ch_G0000054;Parent=NA12877_ch_G0000054;transcript_name=NA12877_ch_T0000274;gene_name=ENSG00000290841;ID=NA12877_ch_T0000274;Name=ENSG00000290841
NA12877_chrY	CAT	exon	2419225	2419522	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=NA12877_ch_T0000274;gene_id=NA12877_ch_G0000054;Parent=NA12877_ch_T0000274;transcript_name=NA12877_ch_T0000274;gene_name=ENSG00000290841;ID=exon:NA12877_ch_T0000274:0;Name=ENSG00000290841;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2419523	2423257	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=NA12877_ch_T0000274;gene_id=NA12877_ch_G0000054;Parent=NA12877_ch_T0000274;transcript_name=NA12877_ch_T0000274;gene_name=ENSG00000290841;ID=intron:NA12877_ch_T0000274:0;Name=ENSG00000290841;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2423258	2423358	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=NA12877_ch_T0000274;gene_id=NA12877_ch_G0000054;Parent=NA12877_ch_T0000274;transcript_name=NA12877_ch_T0000274;gene_name=ENSG00000290841;ID=exon:NA12877_ch_T0000274:1;Name=ENSG00000290841;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2423359	2424559	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=NA12877_ch_T0000274;gene_id=NA12877_ch_G0000054;Parent=NA12877_ch_T0000274;transcript_name=NA12877_ch_T0000274;gene_name=ENSG00000290841;ID=intron:NA12877_ch_T0000274:1;Name=ENSG00000290841;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2424560	2424677	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=NA12877_ch_T0000274;gene_id=NA12877_ch_G0000054;Parent=NA12877_ch_T0000274;transcript_name=NA12877_ch_T0000274;gene_name=ENSG00000290841;ID=exon:NA12877_ch_T0000274:2;Name=ENSG00000290841;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2424678	2426536	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=NA12877_ch_T0000274;gene_id=NA12877_ch_G0000054;Parent=NA12877_ch_T0000274;transcript_name=NA12877_ch_T0000274;gene_name=ENSG00000290841;ID=intron:NA12877_ch_T0000274:2;Name=ENSG00000290841;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2426537	2426666	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=NA12877_ch_T0000274;gene_id=NA12877_ch_G0000054;Parent=NA12877_ch_T0000274;transcript_name=NA12877_ch_T0000274;gene_name=ENSG00000290841;ID=exon:NA12877_ch_T0000274:3;Name=ENSG00000290841;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2465471	2467590	.	-	.	source_gene_common_name=NAP1L1P2;source_gene=ENSG00000229163.2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;gene_id=NA12877_ch_G0000055;gene_biotype=processed_pseudogene;gene_name=NAP1L1P2;gene_sources=liftoff;ID=NA12877_ch_G0000055;Name=NAP1L1P2
NA12877_chrY	CAT	transcript	2465471	2467590	1000	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=NA12877_ch_T0000275;gene_id=NA12877_ch_G0000055;Parent=NA12877_ch_G0000055;transcript_name=NA12877_ch_T0000275;gene_name=NAP1L1P2;ID=NA12877_ch_T0000275;Name=NAP1L1P2
NA12877_chrY	CAT	exon	2465471	2465512	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=NA12877_ch_T0000275;gene_id=NA12877_ch_G0000055;Parent=NA12877_ch_T0000275;transcript_name=NA12877_ch_T0000275;gene_name=NAP1L1P2;ID=exon:NA12877_ch_T0000275:0;Name=NAP1L1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2465513	2465839	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=NA12877_ch_T0000275;gene_id=NA12877_ch_G0000055;Parent=NA12877_ch_T0000275;transcript_name=NA12877_ch_T0000275;gene_name=NAP1L1P2;ID=intron:NA12877_ch_T0000275:0;Name=NAP1L1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2465840	2466836	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=NA12877_ch_T0000275;gene_id=NA12877_ch_G0000055;Parent=NA12877_ch_T0000275;transcript_name=NA12877_ch_T0000275;gene_name=NAP1L1P2;ID=exon:NA12877_ch_T0000275:1;Name=NAP1L1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2466837	2467540	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=NA12877_ch_T0000275;gene_id=NA12877_ch_G0000055;Parent=NA12877_ch_T0000275;transcript_name=NA12877_ch_T0000275;gene_name=NAP1L1P2;ID=intron:NA12877_ch_T0000275:1;Name=NAP1L1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2467541	2467590	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=NA12877_ch_T0000275;gene_id=NA12877_ch_G0000055;Parent=NA12877_ch_T0000275;transcript_name=NA12877_ch_T0000275;gene_name=NAP1L1P2;ID=exon:NA12877_ch_T0000275:2;Name=NAP1L1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2470876	2471241	.	-	.	source_gene_common_name=ENSG00000278847;source_gene=ENSG00000278847.1;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;gene_id=NA12877_ch_G0000056;gene_biotype=lncRNA;gene_name=ENSG00000278847;gene_sources=liftoff;ID=NA12877_ch_G0000056;Name=ENSG00000278847
NA12877_chrY	CAT	transcript	2470876	2471241	1000	-	.	source_transcript=ENST00000611750.1;source_transcript_name=ENST00000611750;source_gene=ENSG00000278847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000278847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000611750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000611750.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278847;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;transcript_id=NA12877_ch_T0000276;gene_id=NA12877_ch_G0000056;Parent=NA12877_ch_G0000056;transcript_name=NA12877_ch_T0000276;gene_name=ENSG00000278847;ID=NA12877_ch_T0000276;Name=ENSG00000278847
NA12877_chrY	CAT	exon	2470876	2471241	.	-	.	source_transcript=ENST00000611750.1;source_transcript_name=ENST00000611750;source_gene=ENSG00000278847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000278847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000611750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000611750.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278847;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;transcript_id=NA12877_ch_T0000276;gene_id=NA12877_ch_G0000056;Parent=NA12877_ch_T0000276;transcript_name=NA12877_ch_T0000276;gene_name=ENSG00000278847;ID=exon:NA12877_ch_T0000276:0;Name=ENSG00000278847;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2471751	2518976	.	+	.	source_gene_common_name=ZFY;source_gene=ENSG00000067646.12;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;gene_id=NA12877_ch_G0000057;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff;ID=NA12877_ch_G0000057;Name=ZFY
NA12877_chrY	CAT	transcript	2471751	2518976	100	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_G0000057;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=NA12877_ch_T0000277;Name=ZFY
NA12877_chrY	CAT	exon	2471751	2471916	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=exon:NA12877_ch_T0000277:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2471917	2490377	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=intron:NA12877_ch_T0000277:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2490378	2490466	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=exon:NA12877_ch_T0000277:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2490406	2490466	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=CDS:NA12877_ch_T0000277:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2490406	2490408	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=start_codon:NA12877_ch_T0000277;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2490467	2497542	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=intron:NA12877_ch_T0000277:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2497543	2498115	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=exon:NA12877_ch_T0000277:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2497543	2498115	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=CDS:NA12877_ch_T0000277:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2498116	2511563	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=intron:NA12877_ch_T0000277:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2511564	2511713	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=exon:NA12877_ch_T0000277:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2511564	2511713	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=CDS:NA12877_ch_T0000277:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2511714	2511979	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=intron:NA12877_ch_T0000277:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2511980	2512123	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=exon:NA12877_ch_T0000277:4;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2511980	2512123	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=CDS:NA12877_ch_T0000277:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2512124	2513138	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=intron:NA12877_ch_T0000277:4;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2513139	2513291	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=exon:NA12877_ch_T0000277:5;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2513139	2513291	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=CDS:NA12877_ch_T0000277:4;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2513292	2514409	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=intron:NA12877_ch_T0000277:5;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2514410	2514550	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=exon:NA12877_ch_T0000277:6;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2514410	2514550	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=CDS:NA12877_ch_T0000277:5;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2514551	2515279	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=intron:NA12877_ch_T0000277:6;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2515280	2518976	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=exon:NA12877_ch_T0000277:7;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2515280	2516463	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=CDS:NA12877_ch_T0000277:6;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2516461	2516463	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=NA12877_ch_T0000277;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000277;transcript_name=NA12877_ch_T0000277;gene_name=ZFY;ID=stop_codon:NA12877_ch_T0000277;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2471851	2518976	100	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_G0000057;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=NA12877_ch_T0000278;Name=ZFY
NA12877_chrY	CAT	exon	2471851	2472239	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=exon:NA12877_ch_T0000278:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2472240	2490377	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=intron:NA12877_ch_T0000278:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2490378	2490466	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=exon:NA12877_ch_T0000278:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2490406	2490466	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=CDS:NA12877_ch_T0000278:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2490406	2490408	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=start_codon:NA12877_ch_T0000278;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2490467	2497542	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=intron:NA12877_ch_T0000278:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2497543	2498115	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=exon:NA12877_ch_T0000278:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2497543	2498115	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=CDS:NA12877_ch_T0000278:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2498116	2511563	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=intron:NA12877_ch_T0000278:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2511564	2511713	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=exon:NA12877_ch_T0000278:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2511564	2511713	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=CDS:NA12877_ch_T0000278:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2511714	2511979	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=intron:NA12877_ch_T0000278:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2511980	2512123	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=exon:NA12877_ch_T0000278:4;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2511980	2512123	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=CDS:NA12877_ch_T0000278:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2512124	2513138	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=intron:NA12877_ch_T0000278:4;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2513139	2513291	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=exon:NA12877_ch_T0000278:5;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2513139	2513291	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=CDS:NA12877_ch_T0000278:4;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2513292	2514409	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=intron:NA12877_ch_T0000278:5;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2514410	2514550	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=exon:NA12877_ch_T0000278:6;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2514410	2514550	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=CDS:NA12877_ch_T0000278:5;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2514551	2515279	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=intron:NA12877_ch_T0000278:6;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2515280	2518976	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=exon:NA12877_ch_T0000278:7;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2515280	2516463	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=CDS:NA12877_ch_T0000278:6;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2516461	2516463	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=NA12877_ch_T0000278;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000278;transcript_name=NA12877_ch_T0000278;gene_name=ZFY;ID=stop_codon:NA12877_ch_T0000278;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2471859	2516817	100	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_G0000057;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=NA12877_ch_T0000279;Name=ZFY
NA12877_chrY	CAT	exon	2471859	2471916	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=exon:NA12877_ch_T0000279:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2471917	2490377	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=intron:NA12877_ch_T0000279:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2490378	2490466	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=exon:NA12877_ch_T0000279:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2490406	2490466	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=CDS:NA12877_ch_T0000279:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2490406	2490408	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=start_codon:NA12877_ch_T0000279;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2490467	2511563	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=intron:NA12877_ch_T0000279:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2511564	2511713	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=exon:NA12877_ch_T0000279:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2511564	2511713	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=CDS:NA12877_ch_T0000279:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2511714	2511979	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=intron:NA12877_ch_T0000279:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2511980	2512123	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=exon:NA12877_ch_T0000279:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2511980	2512123	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=CDS:NA12877_ch_T0000279:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2512124	2513138	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=intron:NA12877_ch_T0000279:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2513139	2513291	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=exon:NA12877_ch_T0000279:4;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2513139	2513291	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=CDS:NA12877_ch_T0000279:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2513292	2514409	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=intron:NA12877_ch_T0000279:4;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2514410	2514550	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=exon:NA12877_ch_T0000279:5;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2514410	2514550	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=CDS:NA12877_ch_T0000279:4;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2514551	2515279	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=intron:NA12877_ch_T0000279:5;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2515280	2516817	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=exon:NA12877_ch_T0000279:6;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2515280	2516463	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=CDS:NA12877_ch_T0000279:5;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2516461	2516463	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=NA12877_ch_T0000279;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000279;transcript_name=NA12877_ch_T0000279;gene_name=ZFY;ID=stop_codon:NA12877_ch_T0000279;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2471970	2514523	1000	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=NA12877_ch_T0000280;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_G0000057;transcript_name=NA12877_ch_T0000280;gene_name=ZFY;ID=NA12877_ch_T0000280;Name=ZFY
NA12877_chrY	CAT	exon	2471970	2472239	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=NA12877_ch_T0000280;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000280;transcript_name=NA12877_ch_T0000280;gene_name=ZFY;ID=exon:NA12877_ch_T0000280:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2472240	2511563	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=NA12877_ch_T0000280;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000280;transcript_name=NA12877_ch_T0000280;gene_name=ZFY;ID=intron:NA12877_ch_T0000280:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2511564	2511713	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=NA12877_ch_T0000280;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000280;transcript_name=NA12877_ch_T0000280;gene_name=ZFY;ID=exon:NA12877_ch_T0000280:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2511714	2511979	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=NA12877_ch_T0000280;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000280;transcript_name=NA12877_ch_T0000280;gene_name=ZFY;ID=intron:NA12877_ch_T0000280:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2511980	2512123	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=NA12877_ch_T0000280;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000280;transcript_name=NA12877_ch_T0000280;gene_name=ZFY;ID=exon:NA12877_ch_T0000280:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2512124	2514409	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=NA12877_ch_T0000280;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000280;transcript_name=NA12877_ch_T0000280;gene_name=ZFY;ID=intron:NA12877_ch_T0000280:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2514410	2514523	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=NA12877_ch_T0000280;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000280;transcript_name=NA12877_ch_T0000280;gene_name=ZFY;ID=exon:NA12877_ch_T0000280:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2471975	2497755	100	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=NA12877_ch_T0000281;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_G0000057;transcript_name=NA12877_ch_T0000281;gene_name=ZFY;ID=NA12877_ch_T0000281;Name=ZFY
NA12877_chrY	CAT	exon	2471975	2472239	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=NA12877_ch_T0000281;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000281;transcript_name=NA12877_ch_T0000281;gene_name=ZFY;ID=exon:NA12877_ch_T0000281:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2472240	2490377	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=NA12877_ch_T0000281;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000281;transcript_name=NA12877_ch_T0000281;gene_name=ZFY;ID=intron:NA12877_ch_T0000281:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2490378	2490466	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=NA12877_ch_T0000281;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000281;transcript_name=NA12877_ch_T0000281;gene_name=ZFY;ID=exon:NA12877_ch_T0000281:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2490406	2490466	.	+	0	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=NA12877_ch_T0000281;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000281;transcript_name=NA12877_ch_T0000281;gene_name=ZFY;ID=CDS:NA12877_ch_T0000281:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2490406	2490408	.	+	0	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=NA12877_ch_T0000281;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000281;transcript_name=NA12877_ch_T0000281;gene_name=ZFY;ID=start_codon:NA12877_ch_T0000281;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2490467	2497542	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=NA12877_ch_T0000281;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000281;transcript_name=NA12877_ch_T0000281;gene_name=ZFY;ID=intron:NA12877_ch_T0000281:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2497543	2497755	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=NA12877_ch_T0000281;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000281;transcript_name=NA12877_ch_T0000281;gene_name=ZFY;ID=exon:NA12877_ch_T0000281:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2497543	2497755	.	+	2	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=NA12877_ch_T0000281;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000281;transcript_name=NA12877_ch_T0000281;gene_name=ZFY;ID=CDS:NA12877_ch_T0000281:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2472121	2517616	100	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_G0000057;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=NA12877_ch_T0000282;Name=ZFY
NA12877_chrY	CAT	exon	2472121	2472239	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=exon:NA12877_ch_T0000282:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2472240	2497542	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=intron:NA12877_ch_T0000282:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2497543	2498115	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=exon:NA12877_ch_T0000282:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2497560	2498115	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=CDS:NA12877_ch_T0000282:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	2497560	2497562	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=start_codon:NA12877_ch_T0000282;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2498116	2511563	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=intron:NA12877_ch_T0000282:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2511564	2511713	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=exon:NA12877_ch_T0000282:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2511564	2511713	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=CDS:NA12877_ch_T0000282:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2511714	2511979	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=intron:NA12877_ch_T0000282:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2511980	2512123	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=exon:NA12877_ch_T0000282:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2511980	2512123	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=CDS:NA12877_ch_T0000282:2;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2512124	2514409	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=intron:NA12877_ch_T0000282:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2514410	2514550	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=exon:NA12877_ch_T0000282:4;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2514410	2514550	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=CDS:NA12877_ch_T0000282:3;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2514551	2515279	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=intron:NA12877_ch_T0000282:4;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2515280	2517616	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=exon:NA12877_ch_T0000282:5;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	2515280	2516463	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=CDS:NA12877_ch_T0000282:4;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	2516461	2516463	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=NA12877_ch_T0000282;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000282;transcript_name=NA12877_ch_T0000282;gene_name=ZFY;ID=stop_codon:NA12877_ch_T0000282;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2514289	2515820	1000	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=NA12877_ch_T0000284;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_G0000057;transcript_name=NA12877_ch_T0000284;gene_name=ZFY;ID=NA12877_ch_T0000284;Name=ZFY
NA12877_chrY	CAT	exon	2514289	2514550	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=NA12877_ch_T0000284;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000284;transcript_name=NA12877_ch_T0000284;gene_name=ZFY;ID=exon:NA12877_ch_T0000284:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2514551	2515279	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=NA12877_ch_T0000284;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000284;transcript_name=NA12877_ch_T0000284;gene_name=ZFY;ID=intron:NA12877_ch_T0000284:0;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2515280	2515820	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=NA12877_ch_T0000284;gene_id=NA12877_ch_G0000057;Parent=NA12877_ch_T0000284;transcript_name=NA12877_ch_T0000284;gene_name=ZFY;ID=exon:NA12877_ch_T0000284:1;Name=ZFY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2503298	2539041	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=ENSG00000233070.2;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;gene_id=NA12877_ch_G0000058;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=NA12877_ch_G0000058;Name=ZFY-AS1
NA12877_chrY	CAT	transcript	2503298	2539288	1000	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=NA12877_ch_T0000283;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_G0000058;transcript_name=NA12877_ch_T0000283;gene_name=ZFY-AS1;ID=NA12877_ch_T0000283;Name=ZFY-AS1
NA12877_chrY	CAT	exon	2503298	2503408	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=NA12877_ch_T0000283;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000283;transcript_name=NA12877_ch_T0000283;gene_name=ZFY-AS1;ID=exon:NA12877_ch_T0000283:0;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2503409	2518307	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=NA12877_ch_T0000283;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000283;transcript_name=NA12877_ch_T0000283;gene_name=ZFY-AS1;ID=intron:NA12877_ch_T0000283:0;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2518308	2518397	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=NA12877_ch_T0000283;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000283;transcript_name=NA12877_ch_T0000283;gene_name=ZFY-AS1;ID=exon:NA12877_ch_T0000283:1;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2518398	2538782	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=NA12877_ch_T0000283;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000283;transcript_name=NA12877_ch_T0000283;gene_name=ZFY-AS1;ID=intron:NA12877_ch_T0000283:1;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2538783	2539288	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=NA12877_ch_T0000283;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000283;transcript_name=NA12877_ch_T0000283;gene_name=ZFY-AS1;ID=exon:NA12877_ch_T0000283:2;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2538096	2539271	1000	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=NA12877_ch_T0000286;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_G0000058;transcript_name=NA12877_ch_T0000286;gene_name=ZFY-AS1;ID=NA12877_ch_T0000286;Name=ZFY-AS1
NA12877_chrY	CAT	exon	2538096	2538393	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=NA12877_ch_T0000286;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000286;transcript_name=NA12877_ch_T0000286;gene_name=ZFY-AS1;ID=exon:NA12877_ch_T0000286:0;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2538394	2538782	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=NA12877_ch_T0000286;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000286;transcript_name=NA12877_ch_T0000286;gene_name=ZFY-AS1;ID=intron:NA12877_ch_T0000286:0;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2538783	2539271	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=NA12877_ch_T0000286;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000286;transcript_name=NA12877_ch_T0000286;gene_name=ZFY-AS1;ID=exon:NA12877_ch_T0000286:1;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2538098	2539041	1000	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=NA12877_ch_T0000287;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_G0000058;transcript_name=NA12877_ch_T0000287;gene_name=ZFY-AS1;ID=NA12877_ch_T0000287;Name=ZFY-AS1
NA12877_chrY	CAT	exon	2538098	2538393	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=NA12877_ch_T0000287;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000287;transcript_name=NA12877_ch_T0000287;gene_name=ZFY-AS1;ID=exon:NA12877_ch_T0000287:0;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2538394	2538782	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=NA12877_ch_T0000287;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000287;transcript_name=NA12877_ch_T0000287;gene_name=ZFY-AS1;ID=intron:NA12877_ch_T0000287:0;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2538783	2538871	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=NA12877_ch_T0000287;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000287;transcript_name=NA12877_ch_T0000287;gene_name=ZFY-AS1;ID=exon:NA12877_ch_T0000287:1;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2538872	2539007	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=NA12877_ch_T0000287;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000287;transcript_name=NA12877_ch_T0000287;gene_name=ZFY-AS1;ID=intron:NA12877_ch_T0000287:1;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2539008	2539041	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=NA12877_ch_T0000287;gene_id=NA12877_ch_G0000058;Parent=NA12877_ch_T0000287;transcript_name=NA12877_ch_T0000287;gene_name=ZFY-AS1;ID=exon:NA12877_ch_T0000287:2;Name=ZFY-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2531537	2531743	.	-	.	source_gene_common_name=EEF1A1P41;source_gene=ENSG00000223600.1;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;gene_id=NA12877_ch_G0000059;gene_biotype=processed_pseudogene;gene_name=EEF1A1P41;gene_sources=liftoff;ID=NA12877_ch_G0000059;Name=EEF1A1P41
NA12877_chrY	CAT	transcript	2531537	2531743	1000	-	.	source_transcript=ENST00000414667.1;source_transcript_name=EEF1A1P41-201;source_gene=ENSG00000223600.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223600.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414667.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EEF1A1P41;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;transcript_id=NA12877_ch_T0000285;gene_id=NA12877_ch_G0000059;Parent=NA12877_ch_G0000059;transcript_name=NA12877_ch_T0000285;gene_name=EEF1A1P41;ID=NA12877_ch_T0000285;Name=EEF1A1P41
NA12877_chrY	CAT	exon	2531537	2531743	.	-	.	source_transcript=ENST00000414667.1;source_transcript_name=EEF1A1P41-201;source_gene=ENSG00000223600.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223600.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414667.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EEF1A1P41;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;transcript_id=NA12877_ch_T0000285;gene_id=NA12877_ch_G0000059;Parent=NA12877_ch_T0000285;transcript_name=NA12877_ch_T0000285;gene_name=EEF1A1P41;ID=exon:NA12877_ch_T0000285:0;Name=EEF1A1P41;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2539357	2736979	.	+	.	source_gene_common_name=LINC00278;source_gene=ENSG00000231535.9;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;gene_id=NA12877_ch_G0000060;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=NA12877_ch_G0000060;Name=LINC00278
NA12877_chrY	CAT	transcript	2539357	2540496	1000	+	.	source_transcript=ENST00000654222.1;source_transcript_name=LINC00278-206;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654222.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;transcript_id=NA12877_ch_T0000288;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000288;gene_name=LINC00278;ID=NA12877_ch_T0000288;Name=LINC00278
NA12877_chrY	CAT	exon	2539357	2540496	.	+	.	source_transcript=ENST00000654222.1;source_transcript_name=LINC00278-206;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;transcript_id=NA12877_ch_T0000288;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000288;transcript_name=NA12877_ch_T0000288;gene_name=LINC00278;ID=exon:NA12877_ch_T0000288:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539357	2657089	1000	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=NA12877_ch_T0000289;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000289;gene_name=LINC00278;ID=NA12877_ch_T0000289;Name=LINC00278
NA12877_chrY	CAT	exon	2539357	2539687	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=NA12877_ch_T0000289;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000289;transcript_name=NA12877_ch_T0000289;gene_name=LINC00278;ID=exon:NA12877_ch_T0000289:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2595126	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=NA12877_ch_T0000289;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000289;transcript_name=NA12877_ch_T0000289;gene_name=LINC00278;ID=intron:NA12877_ch_T0000289:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2595127	2595254	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=NA12877_ch_T0000289;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000289;transcript_name=NA12877_ch_T0000289;gene_name=LINC00278;ID=exon:NA12877_ch_T0000289:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2595255	2615753	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=NA12877_ch_T0000289;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000289;transcript_name=NA12877_ch_T0000289;gene_name=LINC00278;ID=intron:NA12877_ch_T0000289:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2615754	2615811	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=NA12877_ch_T0000289;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000289;transcript_name=NA12877_ch_T0000289;gene_name=LINC00278;ID=exon:NA12877_ch_T0000289:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2615812	2633467	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=NA12877_ch_T0000289;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000289;transcript_name=NA12877_ch_T0000289;gene_name=LINC00278;ID=intron:NA12877_ch_T0000289:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633468	2633526	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=NA12877_ch_T0000289;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000289;transcript_name=NA12877_ch_T0000289;gene_name=LINC00278;ID=exon:NA12877_ch_T0000289:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2633527	2647752	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=NA12877_ch_T0000289;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000289;transcript_name=NA12877_ch_T0000289;gene_name=LINC00278;ID=intron:NA12877_ch_T0000289:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2647753	2647818	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=NA12877_ch_T0000289;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000289;transcript_name=NA12877_ch_T0000289;gene_name=LINC00278;ID=exon:NA12877_ch_T0000289:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2647819	2656905	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=NA12877_ch_T0000289;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000289;transcript_name=NA12877_ch_T0000289;gene_name=LINC00278;ID=intron:NA12877_ch_T0000289:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2656906	2657089	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=NA12877_ch_T0000289;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000289;transcript_name=NA12877_ch_T0000289;gene_name=LINC00278;ID=exon:NA12877_ch_T0000289:5;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539357	2736979	1000	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=NA12877_ch_T0000290;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000290;gene_name=LINC00278;ID=NA12877_ch_T0000290;Name=LINC00278
NA12877_chrY	CAT	exon	2539357	2539687	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=NA12877_ch_T0000290;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000290;transcript_name=NA12877_ch_T0000290;gene_name=LINC00278;ID=exon:NA12877_ch_T0000290:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2735969	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=NA12877_ch_T0000290;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000290;transcript_name=NA12877_ch_T0000290;gene_name=LINC00278;ID=intron:NA12877_ch_T0000290:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2735970	2736979	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=NA12877_ch_T0000290;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000290;transcript_name=NA12877_ch_T0000290;gene_name=LINC00278;ID=exon:NA12877_ch_T0000290:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539364	2634291	1000	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=NA12877_ch_T0000291;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000291;gene_name=LINC00278;ID=NA12877_ch_T0000291;Name=LINC00278
NA12877_chrY	CAT	exon	2539364	2539687	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=NA12877_ch_T0000291;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000291;transcript_name=NA12877_ch_T0000291;gene_name=LINC00278;ID=exon:NA12877_ch_T0000291:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2615753	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=NA12877_ch_T0000291;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000291;transcript_name=NA12877_ch_T0000291;gene_name=LINC00278;ID=intron:NA12877_ch_T0000291:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2615754	2615811	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=NA12877_ch_T0000291;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000291;transcript_name=NA12877_ch_T0000291;gene_name=LINC00278;ID=exon:NA12877_ch_T0000291:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2615812	2633464	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=NA12877_ch_T0000291;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000291;transcript_name=NA12877_ch_T0000291;gene_name=LINC00278;ID=intron:NA12877_ch_T0000291:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633465	2634291	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=NA12877_ch_T0000291;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000291;transcript_name=NA12877_ch_T0000291;gene_name=LINC00278;ID=exon:NA12877_ch_T0000291:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539364	2736979	1000	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=NA12877_ch_T0000292;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000292;gene_name=LINC00278;ID=NA12877_ch_T0000292;Name=LINC00278
NA12877_chrY	CAT	exon	2539364	2539687	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=NA12877_ch_T0000292;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000292;transcript_name=NA12877_ch_T0000292;gene_name=LINC00278;ID=exon:NA12877_ch_T0000292:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2595126	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=NA12877_ch_T0000292;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000292;transcript_name=NA12877_ch_T0000292;gene_name=LINC00278;ID=intron:NA12877_ch_T0000292:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2595127	2595254	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=NA12877_ch_T0000292;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000292;transcript_name=NA12877_ch_T0000292;gene_name=LINC00278;ID=exon:NA12877_ch_T0000292:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2595255	2615753	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=NA12877_ch_T0000292;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000292;transcript_name=NA12877_ch_T0000292;gene_name=LINC00278;ID=intron:NA12877_ch_T0000292:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2615754	2615811	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=NA12877_ch_T0000292;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000292;transcript_name=NA12877_ch_T0000292;gene_name=LINC00278;ID=exon:NA12877_ch_T0000292:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2615812	2633464	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=NA12877_ch_T0000292;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000292;transcript_name=NA12877_ch_T0000292;gene_name=LINC00278;ID=intron:NA12877_ch_T0000292:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633465	2633526	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=NA12877_ch_T0000292;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000292;transcript_name=NA12877_ch_T0000292;gene_name=LINC00278;ID=exon:NA12877_ch_T0000292:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2633527	2735969	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=NA12877_ch_T0000292;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000292;transcript_name=NA12877_ch_T0000292;gene_name=LINC00278;ID=intron:NA12877_ch_T0000292:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2735970	2736979	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=NA12877_ch_T0000292;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000292;transcript_name=NA12877_ch_T0000292;gene_name=LINC00278;ID=exon:NA12877_ch_T0000292:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539364	2657175	1000	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=NA12877_ch_T0000293;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000293;gene_name=LINC00278;ID=NA12877_ch_T0000293;Name=LINC00278
NA12877_chrY	CAT	exon	2539364	2539687	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=NA12877_ch_T0000293;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000293;transcript_name=NA12877_ch_T0000293;gene_name=LINC00278;ID=exon:NA12877_ch_T0000293:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2615753	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=NA12877_ch_T0000293;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000293;transcript_name=NA12877_ch_T0000293;gene_name=LINC00278;ID=intron:NA12877_ch_T0000293:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2615754	2615811	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=NA12877_ch_T0000293;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000293;transcript_name=NA12877_ch_T0000293;gene_name=LINC00278;ID=exon:NA12877_ch_T0000293:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2615812	2633464	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=NA12877_ch_T0000293;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000293;transcript_name=NA12877_ch_T0000293;gene_name=LINC00278;ID=intron:NA12877_ch_T0000293:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633465	2633526	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=NA12877_ch_T0000293;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000293;transcript_name=NA12877_ch_T0000293;gene_name=LINC00278;ID=exon:NA12877_ch_T0000293:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2633527	2638554	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=NA12877_ch_T0000293;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000293;transcript_name=NA12877_ch_T0000293;gene_name=LINC00278;ID=intron:NA12877_ch_T0000293:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2638555	2638664	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=NA12877_ch_T0000293;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000293;transcript_name=NA12877_ch_T0000293;gene_name=LINC00278;ID=exon:NA12877_ch_T0000293:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2638665	2647752	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=NA12877_ch_T0000293;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000293;transcript_name=NA12877_ch_T0000293;gene_name=LINC00278;ID=intron:NA12877_ch_T0000293:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2647753	2647818	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=NA12877_ch_T0000293;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000293;transcript_name=NA12877_ch_T0000293;gene_name=LINC00278;ID=exon:NA12877_ch_T0000293:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2647819	2656905	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=NA12877_ch_T0000293;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000293;transcript_name=NA12877_ch_T0000293;gene_name=LINC00278;ID=intron:NA12877_ch_T0000293:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2656906	2657175	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=NA12877_ch_T0000293;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000293;transcript_name=NA12877_ch_T0000293;gene_name=LINC00278;ID=exon:NA12877_ch_T0000293:5;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539364	2596714	1000	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=NA12877_ch_T0000294;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000294;gene_name=LINC00278;ID=NA12877_ch_T0000294;Name=LINC00278
NA12877_chrY	CAT	exon	2539364	2539687	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=NA12877_ch_T0000294;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000294;transcript_name=NA12877_ch_T0000294;gene_name=LINC00278;ID=exon:NA12877_ch_T0000294:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2595126	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=NA12877_ch_T0000294;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000294;transcript_name=NA12877_ch_T0000294;gene_name=LINC00278;ID=intron:NA12877_ch_T0000294:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2595127	2596714	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=NA12877_ch_T0000294;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000294;transcript_name=NA12877_ch_T0000294;gene_name=LINC00278;ID=exon:NA12877_ch_T0000294:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539369	2650327	1000	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=NA12877_ch_T0000295;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000295;gene_name=LINC00278;ID=NA12877_ch_T0000295;Name=LINC00278
NA12877_chrY	CAT	exon	2539369	2539687	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=NA12877_ch_T0000295;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000295;transcript_name=NA12877_ch_T0000295;gene_name=LINC00278;ID=exon:NA12877_ch_T0000295:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2595126	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=NA12877_ch_T0000295;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000295;transcript_name=NA12877_ch_T0000295;gene_name=LINC00278;ID=intron:NA12877_ch_T0000295:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2595127	2595254	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=NA12877_ch_T0000295;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000295;transcript_name=NA12877_ch_T0000295;gene_name=LINC00278;ID=exon:NA12877_ch_T0000295:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2595255	2633467	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=NA12877_ch_T0000295;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000295;transcript_name=NA12877_ch_T0000295;gene_name=LINC00278;ID=intron:NA12877_ch_T0000295:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633468	2633526	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=NA12877_ch_T0000295;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000295;transcript_name=NA12877_ch_T0000295;gene_name=LINC00278;ID=exon:NA12877_ch_T0000295:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2633527	2647752	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=NA12877_ch_T0000295;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000295;transcript_name=NA12877_ch_T0000295;gene_name=LINC00278;ID=intron:NA12877_ch_T0000295:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2647753	2647818	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=NA12877_ch_T0000295;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000295;transcript_name=NA12877_ch_T0000295;gene_name=LINC00278;ID=exon:NA12877_ch_T0000295:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2647819	2650139	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=NA12877_ch_T0000295;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000295;transcript_name=NA12877_ch_T0000295;gene_name=LINC00278;ID=intron:NA12877_ch_T0000295:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2650140	2650327	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=NA12877_ch_T0000295;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000295;transcript_name=NA12877_ch_T0000295;gene_name=LINC00278;ID=exon:NA12877_ch_T0000295:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539371	2657089	1000	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=NA12877_ch_T0000296;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000296;gene_name=LINC00278;ID=NA12877_ch_T0000296;Name=LINC00278
NA12877_chrY	CAT	exon	2539371	2539687	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=NA12877_ch_T0000296;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000296;transcript_name=NA12877_ch_T0000296;gene_name=LINC00278;ID=exon:NA12877_ch_T0000296:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2595126	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=NA12877_ch_T0000296;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000296;transcript_name=NA12877_ch_T0000296;gene_name=LINC00278;ID=intron:NA12877_ch_T0000296:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2595127	2595254	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=NA12877_ch_T0000296;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000296;transcript_name=NA12877_ch_T0000296;gene_name=LINC00278;ID=exon:NA12877_ch_T0000296:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2595255	2615753	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=NA12877_ch_T0000296;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000296;transcript_name=NA12877_ch_T0000296;gene_name=LINC00278;ID=intron:NA12877_ch_T0000296:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2615754	2615811	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=NA12877_ch_T0000296;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000296;transcript_name=NA12877_ch_T0000296;gene_name=LINC00278;ID=exon:NA12877_ch_T0000296:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2615812	2633464	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=NA12877_ch_T0000296;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000296;transcript_name=NA12877_ch_T0000296;gene_name=LINC00278;ID=intron:NA12877_ch_T0000296:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633465	2633526	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=NA12877_ch_T0000296;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000296;transcript_name=NA12877_ch_T0000296;gene_name=LINC00278;ID=exon:NA12877_ch_T0000296:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2633527	2656905	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=NA12877_ch_T0000296;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000296;transcript_name=NA12877_ch_T0000296;gene_name=LINC00278;ID=intron:NA12877_ch_T0000296:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2656906	2657089	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=NA12877_ch_T0000296;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000296;transcript_name=NA12877_ch_T0000296;gene_name=LINC00278;ID=exon:NA12877_ch_T0000296:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539371	2697326	1000	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=NA12877_ch_T0000297;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000297;gene_name=LINC00278;ID=NA12877_ch_T0000297;Name=LINC00278
NA12877_chrY	CAT	exon	2539371	2539687	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=NA12877_ch_T0000297;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000297;transcript_name=NA12877_ch_T0000297;gene_name=LINC00278;ID=exon:NA12877_ch_T0000297:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2551373	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=NA12877_ch_T0000297;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000297;transcript_name=NA12877_ch_T0000297;gene_name=LINC00278;ID=intron:NA12877_ch_T0000297:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2551374	2551556	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=NA12877_ch_T0000297;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000297;transcript_name=NA12877_ch_T0000297;gene_name=LINC00278;ID=exon:NA12877_ch_T0000297:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2551557	2595126	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=NA12877_ch_T0000297;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000297;transcript_name=NA12877_ch_T0000297;gene_name=LINC00278;ID=intron:NA12877_ch_T0000297:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2595127	2595254	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=NA12877_ch_T0000297;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000297;transcript_name=NA12877_ch_T0000297;gene_name=LINC00278;ID=exon:NA12877_ch_T0000297:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2595255	2633467	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=NA12877_ch_T0000297;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000297;transcript_name=NA12877_ch_T0000297;gene_name=LINC00278;ID=intron:NA12877_ch_T0000297:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633468	2633526	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=NA12877_ch_T0000297;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000297;transcript_name=NA12877_ch_T0000297;gene_name=LINC00278;ID=exon:NA12877_ch_T0000297:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2633527	2697146	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=NA12877_ch_T0000297;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000297;transcript_name=NA12877_ch_T0000297;gene_name=LINC00278;ID=intron:NA12877_ch_T0000297:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2697147	2697326	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=NA12877_ch_T0000297;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000297;transcript_name=NA12877_ch_T0000297;gene_name=LINC00278;ID=exon:NA12877_ch_T0000297:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539371	2634044	1000	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=NA12877_ch_T0000298;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000298;gene_name=LINC00278;ID=NA12877_ch_T0000298;Name=LINC00278
NA12877_chrY	CAT	exon	2539371	2539687	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=NA12877_ch_T0000298;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000298;transcript_name=NA12877_ch_T0000298;gene_name=LINC00278;ID=exon:NA12877_ch_T0000298:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2595126	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=NA12877_ch_T0000298;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000298;transcript_name=NA12877_ch_T0000298;gene_name=LINC00278;ID=intron:NA12877_ch_T0000298:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2595127	2595254	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=NA12877_ch_T0000298;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000298;transcript_name=NA12877_ch_T0000298;gene_name=LINC00278;ID=exon:NA12877_ch_T0000298:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2595255	2615753	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=NA12877_ch_T0000298;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000298;transcript_name=NA12877_ch_T0000298;gene_name=LINC00278;ID=intron:NA12877_ch_T0000298:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2615754	2615811	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=NA12877_ch_T0000298;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000298;transcript_name=NA12877_ch_T0000298;gene_name=LINC00278;ID=exon:NA12877_ch_T0000298:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2615812	2633464	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=NA12877_ch_T0000298;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000298;transcript_name=NA12877_ch_T0000298;gene_name=LINC00278;ID=intron:NA12877_ch_T0000298:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633465	2634044	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=NA12877_ch_T0000298;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000298;transcript_name=NA12877_ch_T0000298;gene_name=LINC00278;ID=exon:NA12877_ch_T0000298:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539376	2638742	1000	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=NA12877_ch_T0000299;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000299;gene_name=LINC00278;ID=NA12877_ch_T0000299;Name=LINC00278
NA12877_chrY	CAT	exon	2539376	2539687	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=NA12877_ch_T0000299;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000299;transcript_name=NA12877_ch_T0000299;gene_name=LINC00278;ID=exon:NA12877_ch_T0000299:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2615753	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=NA12877_ch_T0000299;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000299;transcript_name=NA12877_ch_T0000299;gene_name=LINC00278;ID=intron:NA12877_ch_T0000299:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2615754	2615811	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=NA12877_ch_T0000299;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000299;transcript_name=NA12877_ch_T0000299;gene_name=LINC00278;ID=exon:NA12877_ch_T0000299:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2615812	2633464	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=NA12877_ch_T0000299;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000299;transcript_name=NA12877_ch_T0000299;gene_name=LINC00278;ID=intron:NA12877_ch_T0000299:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633465	2633526	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=NA12877_ch_T0000299;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000299;transcript_name=NA12877_ch_T0000299;gene_name=LINC00278;ID=exon:NA12877_ch_T0000299:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2633527	2638554	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=NA12877_ch_T0000299;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000299;transcript_name=NA12877_ch_T0000299;gene_name=LINC00278;ID=intron:NA12877_ch_T0000299:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2638555	2638742	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=NA12877_ch_T0000299;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000299;transcript_name=NA12877_ch_T0000299;gene_name=LINC00278;ID=exon:NA12877_ch_T0000299:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539376	2634056	1000	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=NA12877_ch_T0000300;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000300;gene_name=LINC00278;ID=NA12877_ch_T0000300;Name=LINC00278
NA12877_chrY	CAT	exon	2539376	2539687	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=NA12877_ch_T0000300;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000300;transcript_name=NA12877_ch_T0000300;gene_name=LINC00278;ID=exon:NA12877_ch_T0000300:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2633464	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=NA12877_ch_T0000300;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000300;transcript_name=NA12877_ch_T0000300;gene_name=LINC00278;ID=intron:NA12877_ch_T0000300:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633465	2634056	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=NA12877_ch_T0000300;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000300;transcript_name=NA12877_ch_T0000300;gene_name=LINC00278;ID=exon:NA12877_ch_T0000300:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539382	2657172	1000	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=NA12877_ch_T0000301;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000301;gene_name=LINC00278;ID=NA12877_ch_T0000301;Name=LINC00278
NA12877_chrY	CAT	exon	2539382	2539687	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=NA12877_ch_T0000301;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000301;transcript_name=NA12877_ch_T0000301;gene_name=LINC00278;ID=exon:NA12877_ch_T0000301:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2595126	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=NA12877_ch_T0000301;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000301;transcript_name=NA12877_ch_T0000301;gene_name=LINC00278;ID=intron:NA12877_ch_T0000301:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2595127	2595254	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=NA12877_ch_T0000301;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000301;transcript_name=NA12877_ch_T0000301;gene_name=LINC00278;ID=exon:NA12877_ch_T0000301:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2595255	2633464	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=NA12877_ch_T0000301;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000301;transcript_name=NA12877_ch_T0000301;gene_name=LINC00278;ID=intron:NA12877_ch_T0000301:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633465	2633526	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=NA12877_ch_T0000301;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000301;transcript_name=NA12877_ch_T0000301;gene_name=LINC00278;ID=exon:NA12877_ch_T0000301:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2633527	2638554	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=NA12877_ch_T0000301;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000301;transcript_name=NA12877_ch_T0000301;gene_name=LINC00278;ID=intron:NA12877_ch_T0000301:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2638555	2638664	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=NA12877_ch_T0000301;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000301;transcript_name=NA12877_ch_T0000301;gene_name=LINC00278;ID=exon:NA12877_ch_T0000301:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2638665	2647752	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=NA12877_ch_T0000301;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000301;transcript_name=NA12877_ch_T0000301;gene_name=LINC00278;ID=intron:NA12877_ch_T0000301:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2647753	2647818	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=NA12877_ch_T0000301;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000301;transcript_name=NA12877_ch_T0000301;gene_name=LINC00278;ID=exon:NA12877_ch_T0000301:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2647819	2656905	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=NA12877_ch_T0000301;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000301;transcript_name=NA12877_ch_T0000301;gene_name=LINC00278;ID=intron:NA12877_ch_T0000301:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2656906	2657172	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=NA12877_ch_T0000301;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000301;transcript_name=NA12877_ch_T0000301;gene_name=LINC00278;ID=exon:NA12877_ch_T0000301:5;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539382	2650327	1000	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=NA12877_ch_T0000302;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000302;gene_name=LINC00278;ID=NA12877_ch_T0000302;Name=LINC00278
NA12877_chrY	CAT	exon	2539382	2539687	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=NA12877_ch_T0000302;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000302;transcript_name=NA12877_ch_T0000302;gene_name=LINC00278;ID=exon:NA12877_ch_T0000302:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2595126	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=NA12877_ch_T0000302;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000302;transcript_name=NA12877_ch_T0000302;gene_name=LINC00278;ID=intron:NA12877_ch_T0000302:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2595127	2595254	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=NA12877_ch_T0000302;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000302;transcript_name=NA12877_ch_T0000302;gene_name=LINC00278;ID=exon:NA12877_ch_T0000302:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2595255	2647752	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=NA12877_ch_T0000302;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000302;transcript_name=NA12877_ch_T0000302;gene_name=LINC00278;ID=intron:NA12877_ch_T0000302:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2647753	2647818	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=NA12877_ch_T0000302;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000302;transcript_name=NA12877_ch_T0000302;gene_name=LINC00278;ID=exon:NA12877_ch_T0000302:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2647819	2650139	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=NA12877_ch_T0000302;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000302;transcript_name=NA12877_ch_T0000302;gene_name=LINC00278;ID=intron:NA12877_ch_T0000302:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2650140	2650327	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=NA12877_ch_T0000302;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000302;transcript_name=NA12877_ch_T0000302;gene_name=LINC00278;ID=exon:NA12877_ch_T0000302:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539382	2650327	1000	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=NA12877_ch_T0000303;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000303;gene_name=LINC00278;ID=NA12877_ch_T0000303;Name=LINC00278
NA12877_chrY	CAT	exon	2539382	2539687	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=NA12877_ch_T0000303;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000303;transcript_name=NA12877_ch_T0000303;gene_name=LINC00278;ID=exon:NA12877_ch_T0000303:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2595126	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=NA12877_ch_T0000303;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000303;transcript_name=NA12877_ch_T0000303;gene_name=LINC00278;ID=intron:NA12877_ch_T0000303:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2595127	2595254	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=NA12877_ch_T0000303;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000303;transcript_name=NA12877_ch_T0000303;gene_name=LINC00278;ID=exon:NA12877_ch_T0000303:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2595255	2615753	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=NA12877_ch_T0000303;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000303;transcript_name=NA12877_ch_T0000303;gene_name=LINC00278;ID=intron:NA12877_ch_T0000303:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2615754	2615811	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=NA12877_ch_T0000303;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000303;transcript_name=NA12877_ch_T0000303;gene_name=LINC00278;ID=exon:NA12877_ch_T0000303:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2615812	2633464	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=NA12877_ch_T0000303;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000303;transcript_name=NA12877_ch_T0000303;gene_name=LINC00278;ID=intron:NA12877_ch_T0000303:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633465	2633526	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=NA12877_ch_T0000303;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000303;transcript_name=NA12877_ch_T0000303;gene_name=LINC00278;ID=exon:NA12877_ch_T0000303:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2633527	2647752	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=NA12877_ch_T0000303;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000303;transcript_name=NA12877_ch_T0000303;gene_name=LINC00278;ID=intron:NA12877_ch_T0000303:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2647753	2647818	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=NA12877_ch_T0000303;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000303;transcript_name=NA12877_ch_T0000303;gene_name=LINC00278;ID=exon:NA12877_ch_T0000303:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2647819	2650139	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=NA12877_ch_T0000303;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000303;transcript_name=NA12877_ch_T0000303;gene_name=LINC00278;ID=intron:NA12877_ch_T0000303:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2650140	2650327	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=NA12877_ch_T0000303;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000303;transcript_name=NA12877_ch_T0000303;gene_name=LINC00278;ID=exon:NA12877_ch_T0000303:5;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539471	2646785	1000	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=NA12877_ch_T0000304;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000304;gene_name=LINC00278;ID=NA12877_ch_T0000304;Name=LINC00278
NA12877_chrY	CAT	exon	2539471	2539687	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=NA12877_ch_T0000304;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000304;transcript_name=NA12877_ch_T0000304;gene_name=LINC00278;ID=exon:NA12877_ch_T0000304:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2595126	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=NA12877_ch_T0000304;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000304;transcript_name=NA12877_ch_T0000304;gene_name=LINC00278;ID=intron:NA12877_ch_T0000304:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2595127	2595254	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=NA12877_ch_T0000304;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000304;transcript_name=NA12877_ch_T0000304;gene_name=LINC00278;ID=exon:NA12877_ch_T0000304:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2595255	2633464	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=NA12877_ch_T0000304;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000304;transcript_name=NA12877_ch_T0000304;gene_name=LINC00278;ID=intron:NA12877_ch_T0000304:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633465	2633526	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=NA12877_ch_T0000304;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000304;transcript_name=NA12877_ch_T0000304;gene_name=LINC00278;ID=exon:NA12877_ch_T0000304:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2633527	2638554	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=NA12877_ch_T0000304;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000304;transcript_name=NA12877_ch_T0000304;gene_name=LINC00278;ID=intron:NA12877_ch_T0000304:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2638555	2638664	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=NA12877_ch_T0000304;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000304;transcript_name=NA12877_ch_T0000304;gene_name=LINC00278;ID=exon:NA12877_ch_T0000304:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2638665	2646287	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=NA12877_ch_T0000304;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000304;transcript_name=NA12877_ch_T0000304;gene_name=LINC00278;ID=intron:NA12877_ch_T0000304:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2646288	2646785	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=NA12877_ch_T0000304;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000304;transcript_name=NA12877_ch_T0000304;gene_name=LINC00278;ID=exon:NA12877_ch_T0000304:4;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	2539479	2647591	1000	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=NA12877_ch_T0000305;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_G0000060;transcript_name=NA12877_ch_T0000305;gene_name=LINC00278;ID=NA12877_ch_T0000305;Name=LINC00278
NA12877_chrY	CAT	exon	2539479	2539687	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=NA12877_ch_T0000305;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000305;transcript_name=NA12877_ch_T0000305;gene_name=LINC00278;ID=exon:NA12877_ch_T0000305:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2539688	2615753	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=NA12877_ch_T0000305;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000305;transcript_name=NA12877_ch_T0000305;gene_name=LINC00278;ID=intron:NA12877_ch_T0000305:0;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2615754	2615811	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=NA12877_ch_T0000305;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000305;transcript_name=NA12877_ch_T0000305;gene_name=LINC00278;ID=exon:NA12877_ch_T0000305:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2615812	2633464	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=NA12877_ch_T0000305;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000305;transcript_name=NA12877_ch_T0000305;gene_name=LINC00278;ID=intron:NA12877_ch_T0000305:1;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2633465	2633526	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=NA12877_ch_T0000305;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000305;transcript_name=NA12877_ch_T0000305;gene_name=LINC00278;ID=exon:NA12877_ch_T0000305:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	2633527	2646287	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=NA12877_ch_T0000305;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000305;transcript_name=NA12877_ch_T0000305;gene_name=LINC00278;ID=intron:NA12877_ch_T0000305:2;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	2646288	2647591	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=NA12877_ch_T0000305;gene_id=NA12877_ch_G0000060;Parent=NA12877_ch_T0000305;transcript_name=NA12877_ch_T0000305;gene_name=LINC00278;ID=exon:NA12877_ch_T0000305:3;Name=LINC00278;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	2830277	2831295	.	+	.	source_gene_common_name=AGPAT5P1;source_gene=ENSG00000234652.1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;gene_id=NA12877_ch_G0000061;gene_biotype=processed_pseudogene;gene_name=AGPAT5P1;gene_sources=liftoff;ID=NA12877_ch_G0000061;Name=AGPAT5P1
NA12877_chrY	CAT	transcript	2830277	2831295	1000	+	.	source_transcript=ENST00000455855.1;source_transcript_name=AGPAT5P1-201;source_gene=ENSG00000234652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455855.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455855.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGPAT5P1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;transcript_id=NA12877_ch_T0000306;gene_id=NA12877_ch_G0000061;Parent=NA12877_ch_G0000061;transcript_name=NA12877_ch_T0000306;gene_name=AGPAT5P1;ID=NA12877_ch_T0000306;Name=AGPAT5P1
NA12877_chrY	CAT	exon	2830277	2831295	.	+	.	source_transcript=ENST00000455855.1;source_transcript_name=AGPAT5P1-201;source_gene=ENSG00000234652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455855.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455855.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGPAT5P1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;transcript_id=NA12877_ch_T0000306;gene_id=NA12877_ch_G0000061;Parent=NA12877_ch_T0000306;transcript_name=NA12877_ch_T0000306;gene_name=AGPAT5P1;ID=exon:NA12877_ch_T0000306:0;Name=AGPAT5P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	3086122	3086280	.	-	.	source_gene_common_name=PRRC2CP1;source_gene=ENSG00000216777.1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;gene_id=NA12877_ch_G0000062;gene_biotype=processed_pseudogene;gene_name=PRRC2CP1;gene_sources=liftoff;ID=NA12877_ch_G0000062;Name=PRRC2CP1
NA12877_chrY	CAT	transcript	3086122	3086280	1000	-	.	source_transcript=ENST00000404428.1;source_transcript_name=PRRC2CP1-201;source_gene=ENSG00000216777.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216777.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000404428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000404428.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRRC2CP1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;transcript_id=NA12877_ch_T0000307;gene_id=NA12877_ch_G0000062;Parent=NA12877_ch_G0000062;transcript_name=NA12877_ch_T0000307;gene_name=PRRC2CP1;ID=NA12877_ch_T0000307;Name=PRRC2CP1
NA12877_chrY	CAT	exon	3086122	3086280	.	-	.	source_transcript=ENST00000404428.1;source_transcript_name=PRRC2CP1-201;source_gene=ENSG00000216777.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216777.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000404428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000404428.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRRC2CP1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;transcript_id=NA12877_ch_T0000307;gene_id=NA12877_ch_G0000062;Parent=NA12877_ch_T0000307;transcript_name=NA12877_ch_T0000307;gene_name=PRRC2CP1;ID=exon:NA12877_ch_T0000307:0;Name=PRRC2CP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	3115541	3116515	.	+	.	source_gene_common_name=TGIF2LY;source_gene=ENSG00000176679.9;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;gene_id=NA12877_ch_G0000063;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff;ID=NA12877_ch_G0000063;Name=TGIF2LY
NA12877_chrY	CAT	transcript	3115541	3116515	100	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=NA12877_ch_T0000308;gene_id=NA12877_ch_G0000063;Parent=NA12877_ch_G0000063;transcript_name=NA12877_ch_T0000308;gene_name=TGIF2LY;ID=NA12877_ch_T0000308;Name=TGIF2LY
NA12877_chrY	CAT	exon	3115541	3115601	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=NA12877_ch_T0000308;gene_id=NA12877_ch_G0000063;Parent=NA12877_ch_T0000308;transcript_name=NA12877_ch_T0000308;gene_name=TGIF2LY;ID=exon:NA12877_ch_T0000308:0;Name=TGIF2LY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3115602	3115697	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=NA12877_ch_T0000308;gene_id=NA12877_ch_G0000063;Parent=NA12877_ch_T0000308;transcript_name=NA12877_ch_T0000308;gene_name=TGIF2LY;ID=intron:NA12877_ch_T0000308:0;Name=TGIF2LY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3115698	3116515	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=NA12877_ch_T0000308;gene_id=NA12877_ch_G0000063;Parent=NA12877_ch_T0000308;transcript_name=NA12877_ch_T0000308;gene_name=TGIF2LY;ID=exon:NA12877_ch_T0000308:1;Name=TGIF2LY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	3115719	3116276	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=NA12877_ch_T0000308;gene_id=NA12877_ch_G0000063;Parent=NA12877_ch_T0000308;transcript_name=NA12877_ch_T0000308;gene_name=TGIF2LY;ID=CDS:NA12877_ch_T0000308:0;Name=TGIF2LY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	3115719	3115721	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=NA12877_ch_T0000308;gene_id=NA12877_ch_G0000063;Parent=NA12877_ch_T0000308;transcript_name=NA12877_ch_T0000308;gene_name=TGIF2LY;ID=start_codon:NA12877_ch_T0000308;Name=TGIF2LY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	3116274	3116276	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=NA12877_ch_T0000308;gene_id=NA12877_ch_G0000063;Parent=NA12877_ch_T0000308;transcript_name=NA12877_ch_T0000308;gene_name=TGIF2LY;ID=stop_codon:NA12877_ch_T0000308;Name=TGIF2LY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	3115589	3116515	100	+	.	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=NA12877_ch_T0000309;gene_id=NA12877_ch_G0000063;Parent=NA12877_ch_G0000063;transcript_name=NA12877_ch_T0000309;gene_name=TGIF2LY;ID=NA12877_ch_T0000309;Name=TGIF2LY
NA12877_chrY	CAT	exon	3115589	3116515	.	+	.	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=NA12877_ch_T0000309;gene_id=NA12877_ch_G0000063;Parent=NA12877_ch_T0000309;transcript_name=NA12877_ch_T0000309;gene_name=TGIF2LY;ID=exon:NA12877_ch_T0000309:0;Name=TGIF2LY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	3115719	3116276	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=NA12877_ch_T0000309;gene_id=NA12877_ch_G0000063;Parent=NA12877_ch_T0000309;transcript_name=NA12877_ch_T0000309;gene_name=TGIF2LY;ID=CDS:NA12877_ch_T0000309:0;Name=TGIF2LY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	3115719	3115721	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=NA12877_ch_T0000309;gene_id=NA12877_ch_G0000063;Parent=NA12877_ch_T0000309;transcript_name=NA12877_ch_T0000309;gene_name=TGIF2LY;ID=start_codon:NA12877_ch_T0000309;Name=TGIF2LY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	3116274	3116276	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=NA12877_ch_T0000309;gene_id=NA12877_ch_G0000063;Parent=NA12877_ch_T0000309;transcript_name=NA12877_ch_T0000309;gene_name=TGIF2LY;ID=stop_codon:NA12877_ch_T0000309;Name=TGIF2LY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	3219280	3220343	.	+	.	source_gene_common_name=USP12PY;source_gene=ENSG00000232927.1;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;gene_id=NA12877_ch_G0000064;gene_biotype=processed_pseudogene;gene_name=USP12PY;gene_sources=liftoff;ID=NA12877_ch_G0000064;Name=USP12PY
NA12877_chrY	CAT	transcript	3219280	3220343	1000	+	.	source_transcript=ENST00000427677.1;source_transcript_name=USP12PY-201;source_gene=ENSG00000232927.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232927.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427677.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP12PY;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;transcript_id=NA12877_ch_T0000310;gene_id=NA12877_ch_G0000064;Parent=NA12877_ch_G0000064;transcript_name=NA12877_ch_T0000310;gene_name=USP12PY;ID=NA12877_ch_T0000310;Name=USP12PY
NA12877_chrY	CAT	exon	3219280	3220343	.	+	.	source_transcript=ENST00000427677.1;source_transcript_name=USP12PY-201;source_gene=ENSG00000232927.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232927.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427677.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP12PY;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;transcript_id=NA12877_ch_T0000310;gene_id=NA12877_ch_G0000064;Parent=NA12877_ch_T0000310;transcript_name=NA12877_ch_T0000310;gene_name=USP12PY;ID=exon:NA12877_ch_T0000310:0;Name=USP12PY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	3312683	3401391	.	+	.	source_gene_common_name=ENSG00000286050;source_gene=ENSG00000286050.2;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;gene_id=NA12877_ch_G0000065;gene_biotype=lncRNA;gene_name=ENSG00000286050;gene_sources=liftoff;ID=NA12877_ch_G0000065;Name=ENSG00000286050
NA12877_chrY	CAT	transcript	3312683	3371006	1000	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=NA12877_ch_T0000311;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_G0000065;transcript_name=NA12877_ch_T0000311;gene_name=ENSG00000286050;ID=NA12877_ch_T0000311;Name=ENSG00000286050
NA12877_chrY	CAT	exon	3312683	3312827	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=NA12877_ch_T0000311;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000311;transcript_name=NA12877_ch_T0000311;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000311:0;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3312828	3340318	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=NA12877_ch_T0000311;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000311;transcript_name=NA12877_ch_T0000311;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000311:0;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3340319	3340442	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=NA12877_ch_T0000311;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000311;transcript_name=NA12877_ch_T0000311;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000311:1;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3340443	3340874	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=NA12877_ch_T0000311;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000311;transcript_name=NA12877_ch_T0000311;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000311:1;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3340875	3340986	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=NA12877_ch_T0000311;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000311;transcript_name=NA12877_ch_T0000311;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000311:2;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3340987	3368900	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=NA12877_ch_T0000311;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000311;transcript_name=NA12877_ch_T0000311;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000311:2;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3368901	3368955	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=NA12877_ch_T0000311;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000311;transcript_name=NA12877_ch_T0000311;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000311:3;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3368956	3370851	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=NA12877_ch_T0000311;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000311;transcript_name=NA12877_ch_T0000311;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000311:3;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3370852	3371006	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=NA12877_ch_T0000311;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000311;transcript_name=NA12877_ch_T0000311;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000311:4;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	3322764	3401391	1000	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=NA12877_ch_T0000313;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_G0000065;transcript_name=NA12877_ch_T0000313;gene_name=ENSG00000286050;ID=NA12877_ch_T0000313;Name=ENSG00000286050
NA12877_chrY	CAT	exon	3322764	3322872	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=NA12877_ch_T0000313;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000313;transcript_name=NA12877_ch_T0000313;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000313:0;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3322873	3340318	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=NA12877_ch_T0000313;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000313;transcript_name=NA12877_ch_T0000313;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000313:0;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3340319	3340442	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=NA12877_ch_T0000313;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000313;transcript_name=NA12877_ch_T0000313;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000313:1;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3340443	3340874	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=NA12877_ch_T0000313;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000313;transcript_name=NA12877_ch_T0000313;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000313:1;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3340875	3340986	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=NA12877_ch_T0000313;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000313;transcript_name=NA12877_ch_T0000313;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000313:2;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3340987	3400071	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=NA12877_ch_T0000313;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000313;transcript_name=NA12877_ch_T0000313;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000313:2;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3400072	3400192	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=NA12877_ch_T0000313;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000313;transcript_name=NA12877_ch_T0000313;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000313:3;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3400193	3400330	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=NA12877_ch_T0000313;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000313;transcript_name=NA12877_ch_T0000313;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000313:3;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3400331	3400424	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=NA12877_ch_T0000313;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000313;transcript_name=NA12877_ch_T0000313;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000313:4;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3400425	3400890	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=NA12877_ch_T0000313;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000313;transcript_name=NA12877_ch_T0000313;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000313:4;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3400891	3401391	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=NA12877_ch_T0000313;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000313;transcript_name=NA12877_ch_T0000313;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000313:5;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	3322765	3373261	1000	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=NA12877_ch_T0000314;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_G0000065;transcript_name=NA12877_ch_T0000314;gene_name=ENSG00000286050;ID=NA12877_ch_T0000314;Name=ENSG00000286050
NA12877_chrY	CAT	exon	3322765	3322872	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=NA12877_ch_T0000314;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000314;transcript_name=NA12877_ch_T0000314;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000314:0;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3322873	3340318	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=NA12877_ch_T0000314;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000314;transcript_name=NA12877_ch_T0000314;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000314:0;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3340319	3340442	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=NA12877_ch_T0000314;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000314;transcript_name=NA12877_ch_T0000314;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000314:1;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3340443	3340874	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=NA12877_ch_T0000314;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000314;transcript_name=NA12877_ch_T0000314;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000314:1;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3340875	3340986	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=NA12877_ch_T0000314;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000314;transcript_name=NA12877_ch_T0000314;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000314:2;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3340987	3371957	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=NA12877_ch_T0000314;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000314;transcript_name=NA12877_ch_T0000314;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000314:2;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3371958	3372027	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=NA12877_ch_T0000314;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000314;transcript_name=NA12877_ch_T0000314;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000314:3;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3372028	3372487	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=NA12877_ch_T0000314;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000314;transcript_name=NA12877_ch_T0000314;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000314:3;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3372488	3373261	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=NA12877_ch_T0000314;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000314;transcript_name=NA12877_ch_T0000314;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000314:4;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	3322827	3373259	1000	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=NA12877_ch_T0000315;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_G0000065;transcript_name=NA12877_ch_T0000315;gene_name=ENSG00000286050;ID=NA12877_ch_T0000315;Name=ENSG00000286050
NA12877_chrY	CAT	exon	3322827	3322872	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=NA12877_ch_T0000315;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000315;transcript_name=NA12877_ch_T0000315;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000315:0;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3322873	3337140	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=NA12877_ch_T0000315;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000315;transcript_name=NA12877_ch_T0000315;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000315:0;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3337141	3337236	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=NA12877_ch_T0000315;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000315;transcript_name=NA12877_ch_T0000315;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000315:1;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3337237	3340318	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=NA12877_ch_T0000315;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000315;transcript_name=NA12877_ch_T0000315;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000315:1;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3340319	3340442	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=NA12877_ch_T0000315;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000315;transcript_name=NA12877_ch_T0000315;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000315:2;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3340443	3340874	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=NA12877_ch_T0000315;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000315;transcript_name=NA12877_ch_T0000315;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000315:2;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3340875	3340986	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=NA12877_ch_T0000315;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000315;transcript_name=NA12877_ch_T0000315;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000315:3;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3340987	3371957	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=NA12877_ch_T0000315;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000315;transcript_name=NA12877_ch_T0000315;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000315:3;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3371958	3372027	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=NA12877_ch_T0000315;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000315;transcript_name=NA12877_ch_T0000315;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000315:4;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3372028	3372487	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=NA12877_ch_T0000315;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000315;transcript_name=NA12877_ch_T0000315;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000315:4;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3372488	3373259	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=NA12877_ch_T0000315;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000315;transcript_name=NA12877_ch_T0000315;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000315:5;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	3337179	3371006	1000	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=NA12877_ch_T0000316;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_G0000065;transcript_name=NA12877_ch_T0000316;gene_name=ENSG00000286050;ID=NA12877_ch_T0000316;Name=ENSG00000286050
NA12877_chrY	CAT	exon	3337179	3337236	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=NA12877_ch_T0000316;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000316;transcript_name=NA12877_ch_T0000316;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000316:0;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3337237	3340318	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=NA12877_ch_T0000316;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000316;transcript_name=NA12877_ch_T0000316;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000316:0;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3340319	3340442	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=NA12877_ch_T0000316;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000316;transcript_name=NA12877_ch_T0000316;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000316:1;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3340443	3340874	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=NA12877_ch_T0000316;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000316;transcript_name=NA12877_ch_T0000316;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000316:1;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3340875	3340986	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=NA12877_ch_T0000316;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000316;transcript_name=NA12877_ch_T0000316;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000316:2;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3340987	3368900	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=NA12877_ch_T0000316;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000316;transcript_name=NA12877_ch_T0000316;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000316:2;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3368901	3368955	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=NA12877_ch_T0000316;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000316;transcript_name=NA12877_ch_T0000316;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000316:3;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3368956	3370851	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=NA12877_ch_T0000316;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000316;transcript_name=NA12877_ch_T0000316;gene_name=ENSG00000286050;ID=intron:NA12877_ch_T0000316:3;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3370852	3371006	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=NA12877_ch_T0000316;gene_id=NA12877_ch_G0000065;Parent=NA12877_ch_T0000316;transcript_name=NA12877_ch_T0000316;gene_name=ENSG00000286050;ID=exon:NA12877_ch_T0000316:4;Name=ENSG00000286050;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	3314479	3316028	.	-	.	source_gene_common_name=RNF19BPY;source_gene=ENSG00000225653.1;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;gene_id=NA12877_ch_G0000066;gene_biotype=processed_pseudogene;gene_name=RNF19BPY;gene_sources=liftoff;ID=NA12877_ch_G0000066;Name=RNF19BPY
NA12877_chrY	CAT	transcript	3314479	3316028	1000	-	.	source_transcript=ENST00000458209.1;source_transcript_name=RNF19BPY-201;source_gene=ENSG00000225653.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225653.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458209.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNF19BPY;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;transcript_id=NA12877_ch_T0000312;gene_id=NA12877_ch_G0000066;Parent=NA12877_ch_G0000066;transcript_name=NA12877_ch_T0000312;gene_name=RNF19BPY;ID=NA12877_ch_T0000312;Name=RNF19BPY
NA12877_chrY	CAT	exon	3314479	3316028	.	-	.	source_transcript=ENST00000458209.1;source_transcript_name=RNF19BPY-201;source_gene=ENSG00000225653.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225653.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNF19BPY;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;transcript_id=NA12877_ch_T0000312;gene_id=NA12877_ch_G0000066;Parent=NA12877_ch_T0000312;transcript_name=NA12877_ch_T0000312;gene_name=RNF19BPY;ID=exon:NA12877_ch_T0000312:0;Name=RNF19BPY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	3387718	3389363	.	-	.	source_gene_common_name=ENSG00000218410;source_gene=ENSG00000218410.1;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;gene_id=NA12877_ch_G0000067;gene_biotype=processed_pseudogene;gene_name=ENSG00000218410;gene_sources=liftoff;ID=NA12877_ch_G0000067;Name=ENSG00000218410
NA12877_chrY	CAT	transcript	3387718	3389363	1000	-	.	source_transcript=ENST00000405035.1;source_transcript_name=ENST00000405035;source_gene=ENSG00000218410.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000218410.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000405035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000405035.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000218410;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;transcript_id=NA12877_ch_T0000317;gene_id=NA12877_ch_G0000067;Parent=NA12877_ch_G0000067;transcript_name=NA12877_ch_T0000317;gene_name=ENSG00000218410;ID=NA12877_ch_T0000317;Name=ENSG00000218410
NA12877_chrY	CAT	exon	3387718	3389363	.	-	.	source_transcript=ENST00000405035.1;source_transcript_name=ENST00000405035;source_gene=ENSG00000218410.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000218410.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000405035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000405035.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000218410;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;transcript_id=NA12877_ch_T0000317;gene_id=NA12877_ch_G0000067;Parent=NA12877_ch_T0000317;transcript_name=NA12877_ch_T0000317;gene_name=ENSG00000218410;ID=exon:NA12877_ch_T0000317:0;Name=ENSG00000218410;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	3402800	3403216	.	-	.	source_gene_common_name=UBE2V1P3;source_gene=ENSG00000229518.1;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;gene_id=NA12877_ch_G0000068;gene_biotype=processed_pseudogene;gene_name=UBE2V1P3;gene_sources=liftoff;ID=NA12877_ch_G0000068;Name=UBE2V1P3
NA12877_chrY	CAT	transcript	3402800	3403216	1000	-	.	source_transcript=ENST00000439651.1;source_transcript_name=UBE2V1P3-201;source_gene=ENSG00000229518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439651.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439651.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2V1P3;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;transcript_id=NA12877_ch_T0000318;gene_id=NA12877_ch_G0000068;Parent=NA12877_ch_G0000068;transcript_name=NA12877_ch_T0000318;gene_name=UBE2V1P3;ID=NA12877_ch_T0000318;Name=UBE2V1P3
NA12877_chrY	CAT	exon	3402800	3403216	.	-	.	source_transcript=ENST00000439651.1;source_transcript_name=UBE2V1P3-201;source_gene=ENSG00000229518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439651.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439651.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2V1P3;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;transcript_id=NA12877_ch_T0000318;gene_id=NA12877_ch_G0000068;Parent=NA12877_ch_T0000318;transcript_name=NA12877_ch_T0000318;gene_name=UBE2V1P3;ID=exon:NA12877_ch_T0000318:0;Name=UBE2V1P3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	3575103	3639385	.	+	.	source_gene_common_name=ENSG00000229308;source_gene=ENSG00000229308.2;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;gene_id=NA12877_ch_G0000069;gene_biotype=lncRNA;gene_name=ENSG00000229308;gene_sources=liftoff;ID=NA12877_ch_G0000069;Name=ENSG00000229308
NA12877_chrY	CAT	transcript	3575103	3639385	1000	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=NA12877_ch_T0000319;gene_id=NA12877_ch_G0000069;Parent=NA12877_ch_G0000069;transcript_name=NA12877_ch_T0000319;gene_name=ENSG00000229308;ID=NA12877_ch_T0000319;Name=ENSG00000229308
NA12877_chrY	CAT	exon	3575103	3575167	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=NA12877_ch_T0000319;gene_id=NA12877_ch_G0000069;Parent=NA12877_ch_T0000319;transcript_name=NA12877_ch_T0000319;gene_name=ENSG00000229308;ID=exon:NA12877_ch_T0000319:0;Name=ENSG00000229308;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3575168	3638751	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=NA12877_ch_T0000319;gene_id=NA12877_ch_G0000069;Parent=NA12877_ch_T0000319;transcript_name=NA12877_ch_T0000319;gene_name=ENSG00000229308;ID=intron:NA12877_ch_T0000319:0;Name=ENSG00000229308;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3638752	3639385	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=NA12877_ch_T0000319;gene_id=NA12877_ch_G0000069;Parent=NA12877_ch_T0000319;transcript_name=NA12877_ch_T0000319;gene_name=ENSG00000229308;ID=exon:NA12877_ch_T0000319:1;Name=ENSG00000229308;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	3575220	3639385	1000	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=NA12877_ch_T0000320;gene_id=NA12877_ch_G0000069;Parent=NA12877_ch_G0000069;transcript_name=NA12877_ch_T0000320;gene_name=ENSG00000229308;ID=NA12877_ch_T0000320;Name=ENSG00000229308
NA12877_chrY	CAT	exon	3575220	3575488	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=NA12877_ch_T0000320;gene_id=NA12877_ch_G0000069;Parent=NA12877_ch_T0000320;transcript_name=NA12877_ch_T0000320;gene_name=ENSG00000229308;ID=exon:NA12877_ch_T0000320:0;Name=ENSG00000229308;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	3575489	3638751	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=NA12877_ch_T0000320;gene_id=NA12877_ch_G0000069;Parent=NA12877_ch_T0000320;transcript_name=NA12877_ch_T0000320;gene_name=ENSG00000229308;ID=intron:NA12877_ch_T0000320:0;Name=ENSG00000229308;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	3638752	3639385	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=NA12877_ch_T0000320;gene_id=NA12877_ch_G0000069;Parent=NA12877_ch_T0000320;transcript_name=NA12877_ch_T0000320;gene_name=ENSG00000229308;ID=exon:NA12877_ch_T0000320:1;Name=ENSG00000229308;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	3714108	3714213	.	-	.	source_gene_common_name=RNU6-303P;source_gene=ENSG00000252900.1;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;gene_id=NA12877_ch_G0000070;gene_biotype=snRNA;gene_name=RNU6-303P;gene_sources=liftoff;ID=NA12877_ch_G0000070;Name=RNU6-303P
NA12877_chrY	CAT	transcript	3714108	3714213	1000	-	.	source_transcript=ENST00000517091.1;source_transcript_name=RNU6-303P-201;source_gene=ENSG00000252900.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252900.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517091.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-303P;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;transcript_id=NA12877_ch_T0000321;gene_id=NA12877_ch_G0000070;Parent=NA12877_ch_G0000070;transcript_name=NA12877_ch_T0000321;gene_name=RNU6-303P;ID=NA12877_ch_T0000321;Name=RNU6-303P
NA12877_chrY	CAT	exon	3714108	3714213	.	-	.	source_transcript=ENST00000517091.1;source_transcript_name=RNU6-303P-201;source_gene=ENSG00000252900.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252900.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517091.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-303P;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;transcript_id=NA12877_ch_T0000321;gene_id=NA12877_ch_G0000070;Parent=NA12877_ch_T0000321;transcript_name=NA12877_ch_T0000321;gene_name=RNU6-303P;ID=exon:NA12877_ch_T0000321:0;Name=RNU6-303P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	4340813	4341976	.	-	.	source_gene_common_name=SERBP1P2;source_gene=ENSG00000225878.1;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;gene_id=NA12877_ch_G0000071;gene_biotype=processed_pseudogene;gene_name=SERBP1P2;gene_sources=liftoff;ID=NA12877_ch_G0000071;Name=SERBP1P2
NA12877_chrY	CAT	transcript	4340813	4341976	1000	-	.	source_transcript=ENST00000436888.1;source_transcript_name=SERBP1P2-201;source_gene=ENSG00000225878.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225878.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436888.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SERBP1P2;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;transcript_id=NA12877_ch_T0000322;gene_id=NA12877_ch_G0000071;Parent=NA12877_ch_G0000071;transcript_name=NA12877_ch_T0000322;gene_name=SERBP1P2;ID=NA12877_ch_T0000322;Name=SERBP1P2
NA12877_chrY	CAT	exon	4340813	4341976	.	-	.	source_transcript=ENST00000436888.1;source_transcript_name=SERBP1P2-201;source_gene=ENSG00000225878.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225878.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436888.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SERBP1P2;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;transcript_id=NA12877_ch_T0000322;gene_id=NA12877_ch_G0000071;Parent=NA12877_ch_T0000322;transcript_name=NA12877_ch_T0000322;gene_name=SERBP1P2;ID=exon:NA12877_ch_T0000322:0;Name=SERBP1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	4532506	4539352	.	-	.	source_gene_common_name=ENSG00000277930;source_gene=ENSG00000277930.2;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;gene_id=NA12877_ch_G0000072;gene_biotype=lncRNA;gene_name=ENSG00000277930;gene_sources=liftoff;ID=NA12877_ch_G0000072;Name=ENSG00000277930
NA12877_chrY	CAT	transcript	4532506	4538784	1000	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=NA12877_ch_T0000323;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_G0000072;transcript_name=NA12877_ch_T0000323;gene_name=ENSG00000277930;ID=NA12877_ch_T0000323;Name=ENSG00000277930
NA12877_chrY	CAT	exon	4532506	4533360	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=NA12877_ch_T0000323;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000323;transcript_name=NA12877_ch_T0000323;gene_name=ENSG00000277930;ID=exon:NA12877_ch_T0000323:0;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4533361	4536640	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=NA12877_ch_T0000323;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000323;transcript_name=NA12877_ch_T0000323;gene_name=ENSG00000277930;ID=intron:NA12877_ch_T0000323:0;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4536641	4536814	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=NA12877_ch_T0000323;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000323;transcript_name=NA12877_ch_T0000323;gene_name=ENSG00000277930;ID=exon:NA12877_ch_T0000323:1;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4536815	4538522	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=NA12877_ch_T0000323;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000323;transcript_name=NA12877_ch_T0000323;gene_name=ENSG00000277930;ID=intron:NA12877_ch_T0000323:1;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4538523	4538784	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=NA12877_ch_T0000323;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000323;transcript_name=NA12877_ch_T0000323;gene_name=ENSG00000277930;ID=exon:NA12877_ch_T0000323:2;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	4532506	4539352	1000	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=NA12877_ch_T0000324;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_G0000072;transcript_name=NA12877_ch_T0000324;gene_name=ENSG00000277930;ID=NA12877_ch_T0000324;Name=ENSG00000277930
NA12877_chrY	CAT	exon	4532506	4533360	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=NA12877_ch_T0000324;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000324;transcript_name=NA12877_ch_T0000324;gene_name=ENSG00000277930;ID=exon:NA12877_ch_T0000324:0;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4533361	4536640	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=NA12877_ch_T0000324;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000324;transcript_name=NA12877_ch_T0000324;gene_name=ENSG00000277930;ID=intron:NA12877_ch_T0000324:0;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4536641	4536814	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=NA12877_ch_T0000324;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000324;transcript_name=NA12877_ch_T0000324;gene_name=ENSG00000277930;ID=exon:NA12877_ch_T0000324:1;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4536815	4539155	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=NA12877_ch_T0000324;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000324;transcript_name=NA12877_ch_T0000324;gene_name=ENSG00000277930;ID=intron:NA12877_ch_T0000324:1;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4539156	4539352	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=NA12877_ch_T0000324;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000324;transcript_name=NA12877_ch_T0000324;gene_name=ENSG00000277930;ID=exon:NA12877_ch_T0000324:2;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	4532992	4536853	1000	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=NA12877_ch_T0000325;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_G0000072;transcript_name=NA12877_ch_T0000325;gene_name=ENSG00000277930;ID=NA12877_ch_T0000325;Name=ENSG00000277930
NA12877_chrY	CAT	exon	4532992	4533360	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=NA12877_ch_T0000325;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000325;transcript_name=NA12877_ch_T0000325;gene_name=ENSG00000277930;ID=exon:NA12877_ch_T0000325:0;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4533361	4536640	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=NA12877_ch_T0000325;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000325;transcript_name=NA12877_ch_T0000325;gene_name=ENSG00000277930;ID=intron:NA12877_ch_T0000325:0;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4536641	4536853	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=NA12877_ch_T0000325;gene_id=NA12877_ch_G0000072;Parent=NA12877_ch_T0000325;transcript_name=NA12877_ch_T0000325;gene_name=ENSG00000277930;ID=exon:NA12877_ch_T0000325:1;Name=ENSG00000277930;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	4539360	5281814	.	+	.	source_gene_common_name=PCDH11Y;source_gene=ENSG00000099715.15;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;gene_id=NA12877_ch_G0000073;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff;ID=NA12877_ch_G0000073;Name=PCDH11Y
NA12877_chrY	CAT	transcript	4539360	4644577	100	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_G0000073;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=NA12877_ch_T0000326;Name=PCDH11Y
NA12877_chrY	CAT	exon	4539360	4539739	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000326:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4539740	4571039	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000326:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4571040	4571145	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000326:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4571146	4571803	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000326:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4571804	4571862	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000326:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4571831	4571862	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000326:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	4571831	4571833	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=start_codon:NA12877_ch_T0000326;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4571863	4596022	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000326:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4596023	4596593	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000326:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4596023	4596593	.	+	1	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000326:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4596594	4637347	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000326:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4637348	4639840	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000326:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4637348	4639840	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000326:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4639841	4643476	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000326:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4643477	4644577	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000326:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4643477	4643494	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000326:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	4643492	4643494	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=NA12877_ch_T0000326;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000326;transcript_name=NA12877_ch_T0000326;gene_name=PCDH11Y;ID=stop_codon:NA12877_ch_T0000326;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	4539430	4644592	100	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_G0000073;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=NA12877_ch_T0000327;Name=PCDH11Y
NA12877_chrY	CAT	exon	4539430	4539739	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000327:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4539740	4570032	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000327:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4570033	4570201	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000327:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4570202	4571039	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000327:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4571040	4571145	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000327:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4571146	4571803	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000327:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4571804	4571862	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000327:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4571831	4571862	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000327:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	4571831	4571833	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=start_codon:NA12877_ch_T0000327;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4571863	4596022	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000327:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4596023	4596593	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000327:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4596023	4596593	.	+	1	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000327:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4596594	4637347	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000327:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4637348	4639840	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000327:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4637348	4639840	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000327:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4639841	4643476	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000327:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4643477	4644592	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000327:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4643477	4643494	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000327:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	4643492	4643494	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=NA12877_ch_T0000327;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000327;transcript_name=NA12877_ch_T0000327;gene_name=PCDH11Y;ID=stop_codon:NA12877_ch_T0000327;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	4539430	5281814	100	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_G0000073;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=NA12877_ch_T0000328;Name=PCDH11Y
NA12877_chrY	CAT	exon	4539430	4539739	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000328:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4539740	4596022	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000328:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4596023	4596593	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000328:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4596234	4596593	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000328:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	4596234	4596236	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=start_codon:NA12877_ch_T0000328;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4596594	4637347	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000328:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4637348	4639840	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000328:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4637348	4639840	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000328:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4639841	5040189	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000328:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5040190	5040388	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000328:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5040190	5040388	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000328:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5040389	5121357	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000328:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5121358	5121381	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000328:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5121358	5121381	.	+	2	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000328:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5121382	5276861	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000328:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5276862	5281814	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000328:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5276862	5277532	.	+	2	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000328:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	5277530	5277532	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=NA12877_ch_T0000328;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000328;transcript_name=NA12877_ch_T0000328;gene_name=PCDH11Y;ID=stop_codon:NA12877_ch_T0000328;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	4539430	4639398	100	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_G0000073;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=NA12877_ch_T0000329;Name=PCDH11Y
NA12877_chrY	CAT	exon	4539430	4539739	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000329:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4539740	4570032	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000329:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4570033	4570201	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000329:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4570202	4570348	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000329:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4570349	4570480	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000329:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4570481	4571039	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000329:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4571040	4571145	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000329:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4571146	4571803	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000329:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4571804	4571862	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000329:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4571831	4571862	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000329:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	4571831	4571833	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=start_codon:NA12877_ch_T0000329;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4571863	4596022	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000329:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4596023	4596593	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000329:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4596023	4596593	.	+	1	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000329:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4596594	4637347	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000329:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4637348	4639398	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000329:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4637348	4639398	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=NA12877_ch_T0000329;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000329;transcript_name=NA12877_ch_T0000329;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000329:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	4539524	4571081	1000	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=NA12877_ch_T0000330;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_G0000073;transcript_name=NA12877_ch_T0000330;gene_name=PCDH11Y;ID=NA12877_ch_T0000330;Name=PCDH11Y
NA12877_chrY	CAT	exon	4539524	4539739	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=NA12877_ch_T0000330;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000330;transcript_name=NA12877_ch_T0000330;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000330:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4539740	4541821	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=NA12877_ch_T0000330;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000330;transcript_name=NA12877_ch_T0000330;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000330:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4541822	4541892	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=NA12877_ch_T0000330;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000330;transcript_name=NA12877_ch_T0000330;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000330:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4541893	4571039	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=NA12877_ch_T0000330;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000330;transcript_name=NA12877_ch_T0000330;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000330:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4571040	4571081	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=NA12877_ch_T0000330;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000330;transcript_name=NA12877_ch_T0000330;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000330:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	4539534	4596222	100	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=NA12877_ch_T0000331;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_G0000073;transcript_name=NA12877_ch_T0000331;gene_name=PCDH11Y;ID=NA12877_ch_T0000331;Name=PCDH11Y
NA12877_chrY	CAT	exon	4539534	4539739	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=NA12877_ch_T0000331;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000331;transcript_name=NA12877_ch_T0000331;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000331:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4539740	4541821	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=NA12877_ch_T0000331;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000331;transcript_name=NA12877_ch_T0000331;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000331:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4541822	4541892	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=NA12877_ch_T0000331;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000331;transcript_name=NA12877_ch_T0000331;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000331:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4541893	4571803	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=NA12877_ch_T0000331;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000331;transcript_name=NA12877_ch_T0000331;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000331:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4571804	4571862	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=NA12877_ch_T0000331;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000331;transcript_name=NA12877_ch_T0000331;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000331:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4571831	4571862	.	+	0	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=NA12877_ch_T0000331;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000331;transcript_name=NA12877_ch_T0000331;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000331:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	4571831	4571833	.	+	0	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=NA12877_ch_T0000331;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000331;transcript_name=NA12877_ch_T0000331;gene_name=PCDH11Y;ID=start_codon:NA12877_ch_T0000331;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4571863	4596022	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=NA12877_ch_T0000331;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000331;transcript_name=NA12877_ch_T0000331;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000331:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4596023	4596222	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=NA12877_ch_T0000331;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000331;transcript_name=NA12877_ch_T0000331;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000331:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4596023	4596222	.	+	1	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=NA12877_ch_T0000331;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000331;transcript_name=NA12877_ch_T0000331;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000331:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	4595222	4640570	100	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=NA12877_ch_T0000333;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_G0000073;transcript_name=NA12877_ch_T0000333;gene_name=PCDH11Y;ID=NA12877_ch_T0000333;Name=PCDH11Y
NA12877_chrY	CAT	exon	4595222	4596593	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=NA12877_ch_T0000333;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000333;transcript_name=NA12877_ch_T0000333;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000333:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4595958	4596593	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=NA12877_ch_T0000333;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000333;transcript_name=NA12877_ch_T0000333;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000333:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	4595958	4595960	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=NA12877_ch_T0000333;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000333;transcript_name=NA12877_ch_T0000333;gene_name=PCDH11Y;ID=start_codon:NA12877_ch_T0000333;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4596594	4637347	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=NA12877_ch_T0000333;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000333;transcript_name=NA12877_ch_T0000333;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000333:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4637348	4640570	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=NA12877_ch_T0000333;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000333;transcript_name=NA12877_ch_T0000333;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000333:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4637348	4639873	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=NA12877_ch_T0000333;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000333;transcript_name=NA12877_ch_T0000333;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000333:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	4639871	4639873	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=NA12877_ch_T0000333;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000333;transcript_name=NA12877_ch_T0000333;gene_name=PCDH11Y;ID=stop_codon:NA12877_ch_T0000333;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	4595224	4643833	100	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=NA12877_ch_T0000334;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_G0000073;transcript_name=NA12877_ch_T0000334;gene_name=PCDH11Y;ID=NA12877_ch_T0000334;Name=PCDH11Y
NA12877_chrY	CAT	exon	4595224	4596593	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=NA12877_ch_T0000334;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000334;transcript_name=NA12877_ch_T0000334;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000334:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4595958	4596593	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=NA12877_ch_T0000334;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000334;transcript_name=NA12877_ch_T0000334;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000334:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	4595958	4595960	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=NA12877_ch_T0000334;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000334;transcript_name=NA12877_ch_T0000334;gene_name=PCDH11Y;ID=start_codon:NA12877_ch_T0000334;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4596594	4637347	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=NA12877_ch_T0000334;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000334;transcript_name=NA12877_ch_T0000334;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000334:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4637348	4639840	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=NA12877_ch_T0000334;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000334;transcript_name=NA12877_ch_T0000334;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000334:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4637348	4639840	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=NA12877_ch_T0000334;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000334;transcript_name=NA12877_ch_T0000334;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000334:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4639841	4643476	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=NA12877_ch_T0000334;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000334;transcript_name=NA12877_ch_T0000334;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000334:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4643477	4643833	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=NA12877_ch_T0000334;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000334;transcript_name=NA12877_ch_T0000334;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000334:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4643477	4643494	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=NA12877_ch_T0000334;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000334;transcript_name=NA12877_ch_T0000334;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000334:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	4643492	4643494	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=NA12877_ch_T0000334;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000334;transcript_name=NA12877_ch_T0000334;gene_name=PCDH11Y;ID=stop_codon:NA12877_ch_T0000334;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	4595224	5281814	100	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_G0000073;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=NA12877_ch_T0000335;Name=PCDH11Y
NA12877_chrY	CAT	exon	4595224	4596593	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000335:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4595958	4596593	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000335:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	4595958	4595960	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=start_codon:NA12877_ch_T0000335;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4596594	4637347	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000335:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	4637348	4639840	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000335:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	4637348	4639840	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000335:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	4639841	5040189	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000335:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5040190	5040388	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000335:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5040190	5040388	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000335:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5040389	5121357	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000335:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5121358	5121381	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000335:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5121358	5121381	.	+	2	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000335:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5121382	5276861	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=intron:NA12877_ch_T0000335:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5276862	5281814	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=exon:NA12877_ch_T0000335:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5276862	5277532	.	+	2	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=CDS:NA12877_ch_T0000335:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	5277530	5277532	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=NA12877_ch_T0000335;gene_id=NA12877_ch_G0000073;Parent=NA12877_ch_T0000335;transcript_name=NA12877_ch_T0000335;gene_name=PCDH11Y;ID=stop_codon:NA12877_ch_T0000335;Name=PCDH11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	4558210	4558400	.	+	.	source_gene_common_name=RNU2-57P;source_gene=ENSG00000252468.1;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;gene_id=NA12877_ch_G0000074;gene_biotype=snRNA;gene_name=RNU2-57P;gene_sources=liftoff;ID=NA12877_ch_G0000074;Name=RNU2-57P
NA12877_chrY	CAT	transcript	4558210	4558400	1000	+	.	source_transcript=ENST00000516659.1;source_transcript_name=RNU2-57P-201;source_gene=ENSG00000252468.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252468.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516659.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU2-57P;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;transcript_id=NA12877_ch_T0000332;gene_id=NA12877_ch_G0000074;Parent=NA12877_ch_G0000074;transcript_name=NA12877_ch_T0000332;gene_name=RNU2-57P;ID=NA12877_ch_T0000332;Name=RNU2-57P
NA12877_chrY	CAT	exon	4558210	4558400	.	+	.	source_transcript=ENST00000516659.1;source_transcript_name=RNU2-57P-201;source_gene=ENSG00000252468.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252468.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516659.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU2-57P;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;transcript_id=NA12877_ch_T0000332;gene_id=NA12877_ch_G0000074;Parent=NA12877_ch_T0000332;transcript_name=NA12877_ch_T0000332;gene_name=RNU2-57P;ID=exon:NA12877_ch_T0000332:0;Name=RNU2-57P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	4746351	4747205	.	-	.	source_gene_common_name=VDAC1P6;source_gene=ENSG00000231341.1;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;gene_id=NA12877_ch_G0000075;gene_biotype=processed_pseudogene;gene_name=VDAC1P6;gene_sources=liftoff;ID=NA12877_ch_G0000075;Name=VDAC1P6
NA12877_chrY	CAT	transcript	4746351	4747205	1000	-	.	source_transcript=ENST00000430062.1;source_transcript_name=VDAC1P6-201;source_gene=ENSG00000231341.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231341.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430062.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VDAC1P6;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;transcript_id=NA12877_ch_T0000336;gene_id=NA12877_ch_G0000075;Parent=NA12877_ch_G0000075;transcript_name=NA12877_ch_T0000336;gene_name=VDAC1P6;ID=NA12877_ch_T0000336;Name=VDAC1P6
NA12877_chrY	CAT	exon	4746351	4747205	.	-	.	source_transcript=ENST00000430062.1;source_transcript_name=VDAC1P6-201;source_gene=ENSG00000231341.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231341.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430062.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VDAC1P6;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;transcript_id=NA12877_ch_T0000336;gene_id=NA12877_ch_G0000075;Parent=NA12877_ch_T0000336;transcript_name=NA12877_ch_T0000336;gene_name=VDAC1P6;ID=exon:NA12877_ch_T0000336:0;Name=VDAC1P6;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	4876877	4878096	.	-	.	source_gene_common_name=EIF4A1P2;source_gene=ENSG00000235001.3;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;gene_id=NA12877_ch_G0000076;gene_biotype=processed_pseudogene;gene_name=EIF4A1P2;gene_sources=liftoff;ID=NA12877_ch_G0000076;Name=EIF4A1P2
NA12877_chrY	CAT	transcript	4876877	4878096	1000	-	.	source_transcript=ENST00000422633.1;source_transcript_name=EIF4A1P2-201;source_gene=ENSG00000235001.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235001.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422633.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422633.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF4A1P2;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;transcript_id=NA12877_ch_T0000337;gene_id=NA12877_ch_G0000076;Parent=NA12877_ch_G0000076;transcript_name=NA12877_ch_T0000337;gene_name=EIF4A1P2;ID=NA12877_ch_T0000337;Name=EIF4A1P2
NA12877_chrY	CAT	exon	4876877	4878096	.	-	.	source_transcript=ENST00000422633.1;source_transcript_name=EIF4A1P2-201;source_gene=ENSG00000235001.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235001.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422633.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422633.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF4A1P2;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;transcript_id=NA12877_ch_T0000337;gene_id=NA12877_ch_G0000076;Parent=NA12877_ch_T0000337;transcript_name=NA12877_ch_T0000337;gene_name=EIF4A1P2;ID=exon:NA12877_ch_T0000337:0;Name=EIF4A1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5112728	5114014	.	+	.	source_gene_common_name=KRT18P10;source_gene=ENSG00000214207.2;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;gene_id=NA12877_ch_G0000077;gene_biotype=processed_pseudogene;gene_name=KRT18P10;gene_sources=liftoff;ID=NA12877_ch_G0000077;Name=KRT18P10
NA12877_chrY	CAT	transcript	5112728	5114014	1000	+	.	source_transcript=ENST00000388836.3;source_transcript_name=KRT18P10-201;source_gene=ENSG00000214207.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000214207.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000388836.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000388836.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P10;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;transcript_id=NA12877_ch_T0000338;gene_id=NA12877_ch_G0000077;Parent=NA12877_ch_G0000077;transcript_name=NA12877_ch_T0000338;gene_name=KRT18P10;ID=NA12877_ch_T0000338;Name=KRT18P10
NA12877_chrY	CAT	exon	5112728	5114014	.	+	.	source_transcript=ENST00000388836.3;source_transcript_name=KRT18P10-201;source_gene=ENSG00000214207.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000214207.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000388836.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000388836.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P10;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;transcript_id=NA12877_ch_T0000338;gene_id=NA12877_ch_G0000077;Parent=NA12877_ch_T0000338;transcript_name=NA12877_ch_T0000338;gene_name=KRT18P10;ID=exon:NA12877_ch_T0000338:0;Name=KRT18P10;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5174071	5174246	.	-	.	source_gene_common_name=SNX3P1Y;source_gene=ENSG00000278585.1;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;gene_id=NA12877_ch_G0000078;gene_biotype=processed_pseudogene;gene_name=SNX3P1Y;gene_sources=liftoff;ID=NA12877_ch_G0000078;Name=SNX3P1Y
NA12877_chrY	CAT	transcript	5174071	5174246	1000	-	.	source_transcript=ENST00000615757.1;source_transcript_name=SNX3P1Y-201;source_gene=ENSG00000278585.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278585.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615757.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX3P1Y;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;transcript_id=NA12877_ch_T0000339;gene_id=NA12877_ch_G0000078;Parent=NA12877_ch_G0000078;transcript_name=NA12877_ch_T0000339;gene_name=SNX3P1Y;ID=NA12877_ch_T0000339;Name=SNX3P1Y
NA12877_chrY	CAT	exon	5174071	5174246	.	-	.	source_transcript=ENST00000615757.1;source_transcript_name=SNX3P1Y-201;source_gene=ENSG00000278585.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278585.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615757.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX3P1Y;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;transcript_id=NA12877_ch_T0000339;gene_id=NA12877_ch_G0000078;Parent=NA12877_ch_T0000339;transcript_name=NA12877_ch_T0000339;gene_name=SNX3P1Y;ID=exon:NA12877_ch_T0000339:0;Name=SNX3P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5332892	5333329	.	-	.	source_gene_common_name=RPL26P37;source_gene=ENSG00000235175.1;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;gene_id=NA12877_ch_G0000079;gene_biotype=processed_pseudogene;gene_name=RPL26P37;gene_sources=liftoff;ID=NA12877_ch_G0000079;Name=RPL26P37
NA12877_chrY	CAT	transcript	5332892	5333329	1000	-	.	source_transcript=ENST00000411983.1;source_transcript_name=RPL26P37-201;source_gene=ENSG00000235175.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235175.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000411983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411983.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL26P37;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;transcript_id=NA12877_ch_T0000340;gene_id=NA12877_ch_G0000079;Parent=NA12877_ch_G0000079;transcript_name=NA12877_ch_T0000340;gene_name=RPL26P37;ID=NA12877_ch_T0000340;Name=RPL26P37
NA12877_chrY	CAT	exon	5332892	5333329	.	-	.	source_transcript=ENST00000411983.1;source_transcript_name=RPL26P37-201;source_gene=ENSG00000235175.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235175.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000411983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411983.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL26P37;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;transcript_id=NA12877_ch_T0000340;gene_id=NA12877_ch_G0000079;Parent=NA12877_ch_T0000340;transcript_name=NA12877_ch_T0000340;gene_name=RPL26P37;ID=exon:NA12877_ch_T0000340:0;Name=RPL26P37;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5427096	5428332	.	+	.	source_gene_common_name=TUSC2P1;source_gene=ENSG00000285470.1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;gene_id=NA12877_ch_G0000080;gene_biotype=processed_pseudogene;gene_name=TUSC2P1;gene_sources=liftoff;ID=NA12877_ch_G0000080;Name=TUSC2P1
NA12877_chrY	CAT	transcript	5427096	5428332	1000	+	.	source_transcript=ENST00000645906.1;source_transcript_name=TUSC2P1-201;source_gene=ENSG00000285470.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000285470.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000645906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645906.1;transcript_score=199.91899999999998;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUSC2P1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;transcript_id=NA12877_ch_T0000341;gene_id=NA12877_ch_G0000080;Parent=NA12877_ch_G0000080;transcript_name=NA12877_ch_T0000341;gene_name=TUSC2P1;ID=NA12877_ch_T0000341;Name=TUSC2P1
NA12877_chrY	CAT	exon	5427096	5428332	.	+	.	source_transcript=ENST00000645906.1;source_transcript_name=TUSC2P1-201;source_gene=ENSG00000285470.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000285470.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000645906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645906.1;transcript_score=199.91899999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUSC2P1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;transcript_id=NA12877_ch_T0000341;gene_id=NA12877_ch_G0000080;Parent=NA12877_ch_T0000341;transcript_name=NA12877_ch_T0000341;gene_name=TUSC2P1;ID=exon:NA12877_ch_T0000341:0;Name=TUSC2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5698393	5698856	.	+	.	source_gene_common_name=DLGAP5P1;source_gene=ENSG00000237195.1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;gene_id=NA12877_ch_G0000081;gene_biotype=processed_pseudogene;gene_name=DLGAP5P1;gene_sources=liftoff;ID=NA12877_ch_G0000081;Name=DLGAP5P1
NA12877_chrY	CAT	transcript	5698393	5698856	1000	+	.	source_transcript=ENST00000430307.1;source_transcript_name=DLGAP5P1-201;source_gene=ENSG00000237195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430307.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DLGAP5P1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;transcript_id=NA12877_ch_T0000342;gene_id=NA12877_ch_G0000081;Parent=NA12877_ch_G0000081;transcript_name=NA12877_ch_T0000342;gene_name=DLGAP5P1;ID=NA12877_ch_T0000342;Name=DLGAP5P1
NA12877_chrY	CAT	exon	5698393	5698856	.	+	.	source_transcript=ENST00000430307.1;source_transcript_name=DLGAP5P1-201;source_gene=ENSG00000237195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430307.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DLGAP5P1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;transcript_id=NA12877_ch_T0000342;gene_id=NA12877_ch_G0000081;Parent=NA12877_ch_T0000342;transcript_name=NA12877_ch_T0000342;gene_name=DLGAP5P1;ID=exon:NA12877_ch_T0000342:0;Name=DLGAP5P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5780855	5785682	.	-	.	source_gene_common_name=ENSG00000290369;source_gene=ENSG00000290369.2;gene_id=NA12877_ch_G0000082;gene_biotype=lncRNA;gene_name=ENSG00000290369;gene_sources=liftoff;ID=NA12877_ch_G0000082;Name=ENSG00000290369
NA12877_chrY	CAT	transcript	5780855	5785671	1000	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000343;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_G0000082;transcript_name=NA12877_ch_T0000343;gene_name=ENSG00000290369;ID=NA12877_ch_T0000343;Name=ENSG00000290369
NA12877_chrY	CAT	exon	5780855	5781452	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000343;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000343;transcript_name=NA12877_ch_T0000343;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000343:0;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5781453	5782004	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000343;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000343;transcript_name=NA12877_ch_T0000343;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000343:0;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5782005	5782112	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000343;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000343;transcript_name=NA12877_ch_T0000343;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000343:1;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5782113	5782885	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000343;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000343;transcript_name=NA12877_ch_T0000343;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000343:1;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5782886	5783031	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000343;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000343;transcript_name=NA12877_ch_T0000343;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000343:2;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5783032	5783144	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000343;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000343;transcript_name=NA12877_ch_T0000343;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000343:2;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5783145	5783234	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000343;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000343;transcript_name=NA12877_ch_T0000343;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000343:3;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5783235	5783429	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000343;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000343;transcript_name=NA12877_ch_T0000343;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000343:3;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5783430	5783552	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000343;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000343;transcript_name=NA12877_ch_T0000343;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000343:4;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5783553	5785496	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000343;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000343;transcript_name=NA12877_ch_T0000343;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000343:4;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5785497	5785671	.	-	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000343;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000343;transcript_name=NA12877_ch_T0000343;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000343:5;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5781034	5785660	1000	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_G0000082;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=NA12877_ch_T0000344;Name=ENSG00000290369
NA12877_chrY	CAT	exon	5781034	5781452	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000344:0;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5781453	5782004	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000344:0;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5782005	5782112	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000344:1;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5782113	5782292	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000344:1;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5782293	5782345	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000344:2;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5782346	5782885	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000344:2;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5782886	5783031	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000344:3;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5783032	5783144	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000344:3;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5783145	5783230	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000344:4;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5783231	5783429	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000344:4;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5783430	5783552	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000344:5;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5783553	5785496	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000344:5;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5785497	5785660	.	-	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000344;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000344;transcript_name=NA12877_ch_T0000344;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000344:6;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5781034	5785682	1000	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000345;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_G0000082;transcript_name=NA12877_ch_T0000345;gene_name=ENSG00000290369;ID=NA12877_ch_T0000345;Name=ENSG00000290369
NA12877_chrY	CAT	exon	5781034	5782345	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000345;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000345;transcript_name=NA12877_ch_T0000345;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000345:0;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5782346	5782885	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000345;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000345;transcript_name=NA12877_ch_T0000345;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000345:0;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5782886	5783031	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000345;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000345;transcript_name=NA12877_ch_T0000345;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000345:1;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5783032	5783144	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000345;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000345;transcript_name=NA12877_ch_T0000345;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000345:1;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5783145	5783234	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000345;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000345;transcript_name=NA12877_ch_T0000345;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000345:2;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5783235	5783429	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000345;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000345;transcript_name=NA12877_ch_T0000345;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000345:2;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5783430	5783552	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000345;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000345;transcript_name=NA12877_ch_T0000345;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000345:3;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5783553	5785496	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000345;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000345;transcript_name=NA12877_ch_T0000345;gene_name=ENSG00000290369;ID=intron:NA12877_ch_T0000345:3;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5785497	5785682	.	-	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=NA12877_ch_T0000345;gene_id=NA12877_ch_G0000082;Parent=NA12877_ch_T0000345;transcript_name=NA12877_ch_T0000345;gene_name=ENSG00000290369;ID=exon:NA12877_ch_T0000345:4;Name=ENSG00000290369;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5782886	5784874	.	-	.	source_gene_common_name=TTTY23B;source_gene=ENSG00000250204.3;gene_id=NA12877_ch_G0000083;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TTTY23B;gene_sources=liftoff;ID=NA12877_ch_G0000083;Name=TTTY23B
NA12877_chrY	CAT	transcript	5782886	5784874	1000	-	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=NA12877_ch_T0000346;gene_id=NA12877_ch_G0000083;Parent=NA12877_ch_G0000083;transcript_name=NA12877_ch_T0000346;gene_name=TTTY23B;ID=NA12877_ch_T0000346;Name=TTTY23B
NA12877_chrY	CAT	exon	5782886	5783031	.	-	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=NA12877_ch_T0000346;gene_id=NA12877_ch_G0000083;Parent=NA12877_ch_T0000346;transcript_name=NA12877_ch_T0000346;gene_name=TTTY23B;ID=exon:NA12877_ch_T0000346:0;Name=TTTY23B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5783032	5783143	.	-	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=NA12877_ch_T0000346;gene_id=NA12877_ch_G0000083;Parent=NA12877_ch_T0000346;transcript_name=NA12877_ch_T0000346;gene_name=TTTY23B;ID=intron:NA12877_ch_T0000346:0;Name=TTTY23B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5783144	5783234	.	-	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=NA12877_ch_T0000346;gene_id=NA12877_ch_G0000083;Parent=NA12877_ch_T0000346;transcript_name=NA12877_ch_T0000346;gene_name=TTTY23B;ID=exon:NA12877_ch_T0000346:1;Name=TTTY23B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5783235	5784562	.	-	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=NA12877_ch_T0000346;gene_id=NA12877_ch_G0000083;Parent=NA12877_ch_T0000346;transcript_name=NA12877_ch_T0000346;gene_name=TTTY23B;ID=intron:NA12877_ch_T0000346:1;Name=TTTY23B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5784563	5784874	.	-	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=NA12877_ch_T0000346;gene_id=NA12877_ch_G0000083;Parent=NA12877_ch_T0000346;transcript_name=NA12877_ch_T0000346;gene_name=TTTY23B;ID=exon:NA12877_ch_T0000346:2;Name=TTTY23B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5785814	5788609	.	+	.	source_gene_common_name=TSPY2;source_gene=ENSG00000168757.13;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;gene_id=NA12877_ch_G0000084;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff;ID=NA12877_ch_G0000084;Name=TSPY2
NA12877_chrY	CAT	transcript	5785814	5788609	100	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_G0000084;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=NA12877_ch_T0000347;Name=TSPY2
NA12877_chrY	CAT	exon	5785814	5786345	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=exon:NA12877_ch_T0000347:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5785860	5786345	.	+	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000347:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	5785860	5785862	.	+	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=start_codon:NA12877_ch_T0000347;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5786346	5786946	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=intron:NA12877_ch_T0000347:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5786947	5787024	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=exon:NA12877_ch_T0000347:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5786947	5787024	.	+	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000347:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787025	5787152	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=intron:NA12877_ch_T0000347:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5787153	5787264	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=exon:NA12877_ch_T0000347:2;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5787153	5787264	.	+	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000347:2;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787265	5787365	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=intron:NA12877_ch_T0000347:2;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5787366	5787511	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=exon:NA12877_ch_T0000347:3;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5787366	5787511	.	+	2	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000347:3;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787512	5787617	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=intron:NA12877_ch_T0000347:3;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5787618	5787699	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=exon:NA12877_ch_T0000347:4;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5787618	5787699	.	+	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000347:4;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787700	5788393	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=intron:NA12877_ch_T0000347:4;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5788394	5788609	.	+	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=exon:NA12877_ch_T0000347:5;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5788394	5788416	.	+	2	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000347:5;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	5788414	5788416	.	+	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9,ENST00000320701.9;transcript_id=NA12877_ch_T0000347;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000347;transcript_name=NA12877_ch_T0000347;gene_name=TSPY2;ID=stop_codon:NA12877_ch_T0000347;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5785814	5788483	100	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_G0000084;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=NA12877_ch_T0000348;Name=TSPY2
NA12877_chrY	CAT	exon	5785814	5785946	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=exon:NA12877_ch_T0000348:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5785860	5785946	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000348:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	5785860	5785862	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=start_codon:NA12877_ch_T0000348;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5785947	5786207	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=intron:NA12877_ch_T0000348:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5786208	5786345	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=exon:NA12877_ch_T0000348:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5786208	5786345	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000348:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5786346	5786946	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=intron:NA12877_ch_T0000348:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5786947	5787024	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=exon:NA12877_ch_T0000348:2;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5786947	5787024	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000348:2;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787025	5787152	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=intron:NA12877_ch_T0000348:2;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5787153	5787264	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=exon:NA12877_ch_T0000348:3;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5787153	5787264	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000348:3;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787265	5787365	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=intron:NA12877_ch_T0000348:3;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5787366	5787511	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=exon:NA12877_ch_T0000348:4;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5787366	5787511	.	+	2	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000348:4;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787512	5787617	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=intron:NA12877_ch_T0000348:4;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5787618	5787699	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=exon:NA12877_ch_T0000348:5;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5787618	5787699	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000348:5;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787700	5788393	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=intron:NA12877_ch_T0000348:5;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5788394	5788483	.	+	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=exon:NA12877_ch_T0000348:6;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5788394	5788416	.	+	2	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000348:6;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	5788414	5788416	.	+	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5,ENST00000429039.5;transcript_id=NA12877_ch_T0000348;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000348;transcript_name=NA12877_ch_T0000348;gene_name=TSPY2;ID=stop_codon:NA12877_ch_T0000348;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5785860	5788603	100	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_G0000084;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=NA12877_ch_T0000349;Name=TSPY2
NA12877_chrY	CAT	exon	5785860	5786345	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=exon:NA12877_ch_T0000349:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5785860	5786345	.	+	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000349:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	5785860	5785862	.	+	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=start_codon:NA12877_ch_T0000349;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5786346	5786946	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=intron:NA12877_ch_T0000349:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5786947	5787024	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=exon:NA12877_ch_T0000349:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5786947	5787024	.	+	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000349:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787025	5787152	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=intron:NA12877_ch_T0000349:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5787153	5787264	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=exon:NA12877_ch_T0000349:2;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5787153	5787264	.	+	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000349:2;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787265	5787365	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=intron:NA12877_ch_T0000349:2;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5787366	5787511	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=exon:NA12877_ch_T0000349:3;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5787366	5787511	.	+	2	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000349:3;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787512	5787606	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=intron:NA12877_ch_T0000349:3;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5787607	5787699	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=exon:NA12877_ch_T0000349:4;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	5787607	5787669	.	+	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=CDS:NA12877_ch_T0000349:4;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	5787667	5787669	.	+	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=stop_codon:NA12877_ch_T0000349;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787700	5788393	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=intron:NA12877_ch_T0000349:4;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5788394	5788603	.	+	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1,ENST00000383042.1;transcript_id=NA12877_ch_T0000349;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000349;transcript_name=NA12877_ch_T0000349;gene_name=TSPY2;ID=exon:NA12877_ch_T0000349:5;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5785860	5788610	1000	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=NA12877_ch_T0000350;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_G0000084;transcript_name=NA12877_ch_T0000350;gene_name=TSPY2;ID=NA12877_ch_T0000350;Name=TSPY2
NA12877_chrY	CAT	exon	5785860	5786345	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=NA12877_ch_T0000350;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000350;transcript_name=NA12877_ch_T0000350;gene_name=TSPY2;ID=exon:NA12877_ch_T0000350:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5786346	5786946	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=NA12877_ch_T0000350;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000350;transcript_name=NA12877_ch_T0000350;gene_name=TSPY2;ID=intron:NA12877_ch_T0000350:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5786947	5787024	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=NA12877_ch_T0000350;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000350;transcript_name=NA12877_ch_T0000350;gene_name=TSPY2;ID=exon:NA12877_ch_T0000350:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787025	5787152	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=NA12877_ch_T0000350;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000350;transcript_name=NA12877_ch_T0000350;gene_name=TSPY2;ID=intron:NA12877_ch_T0000350:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5787153	5787699	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=NA12877_ch_T0000350;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000350;transcript_name=NA12877_ch_T0000350;gene_name=TSPY2;ID=exon:NA12877_ch_T0000350:2;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787700	5787826	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=NA12877_ch_T0000350;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000350;transcript_name=NA12877_ch_T0000350;gene_name=TSPY2;ID=intron:NA12877_ch_T0000350:2;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5787827	5788610	.	+	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1,ENST00000470569.1;transcript_id=NA12877_ch_T0000350;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000350;transcript_name=NA12877_ch_T0000350;gene_name=TSPY2;ID=exon:NA12877_ch_T0000350:3;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5787214	5788595	1000	+	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1,ENST00000464674.1;transcript_id=NA12877_ch_T0000351;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_G0000084;transcript_name=NA12877_ch_T0000351;gene_name=TSPY2;ID=NA12877_ch_T0000351;Name=TSPY2
NA12877_chrY	CAT	exon	5787214	5787511	.	+	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1,ENST00000464674.1;transcript_id=NA12877_ch_T0000351;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000351;transcript_name=NA12877_ch_T0000351;gene_name=TSPY2;ID=exon:NA12877_ch_T0000351:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787512	5787617	.	+	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1,ENST00000464674.1;transcript_id=NA12877_ch_T0000351;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000351;transcript_name=NA12877_ch_T0000351;gene_name=TSPY2;ID=intron:NA12877_ch_T0000351:0;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5787618	5787699	.	+	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1,ENST00000464674.1;transcript_id=NA12877_ch_T0000351;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000351;transcript_name=NA12877_ch_T0000351;gene_name=TSPY2;ID=exon:NA12877_ch_T0000351:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5787700	5788393	.	+	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1,ENST00000464674.1;transcript_id=NA12877_ch_T0000351;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000351;transcript_name=NA12877_ch_T0000351;gene_name=TSPY2;ID=intron:NA12877_ch_T0000351:1;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5788394	5788595	.	+	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1,ENST00000464674.1;transcript_id=NA12877_ch_T0000351;gene_id=NA12877_ch_G0000084;Parent=NA12877_ch_T0000351;transcript_name=NA12877_ch_T0000351;gene_name=TSPY2;ID=exon:NA12877_ch_T0000351:2;Name=TSPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5795858	5803545	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1;gene_id=NA12877_ch_G0000085;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000085;Name=FAM197Y9
NA12877_chrY	CAT	transcript	5795858	5803545	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000352;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_G0000085;transcript_name=NA12877_ch_T0000352;gene_name=FAM197Y9;ID=NA12877_ch_T0000352;Name=FAM197Y9
NA12877_chrY	CAT	exon	5795858	5797983	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000352;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_T0000352;transcript_name=NA12877_ch_T0000352;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000352:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5797984	5801534	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000352;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_T0000352;transcript_name=NA12877_ch_T0000352;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000352:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5801535	5801620	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000352;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_T0000352;transcript_name=NA12877_ch_T0000352;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000352:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5801621	5803425	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000352;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_T0000352;transcript_name=NA12877_ch_T0000352;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000352:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5803426	5803545	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000352;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_T0000352;transcript_name=NA12877_ch_T0000352;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000352:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5797924	5803527	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000353;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_G0000085;transcript_name=NA12877_ch_T0000353;gene_name=FAM197Y9;ID=NA12877_ch_T0000353;Name=FAM197Y9
NA12877_chrY	CAT	exon	5797924	5797983	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000353;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_T0000353;transcript_name=NA12877_ch_T0000353;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000353:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5797984	5801534	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000353;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_T0000353;transcript_name=NA12877_ch_T0000353;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000353:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5801535	5801693	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000353;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_T0000353;transcript_name=NA12877_ch_T0000353;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000353:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5801694	5803193	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000353;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_T0000353;transcript_name=NA12877_ch_T0000353;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000353:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5803194	5803339	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000353;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_T0000353;transcript_name=NA12877_ch_T0000353;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000353:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5803340	5803425	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000353;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_T0000353;transcript_name=NA12877_ch_T0000353;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000353:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5803426	5803527	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000353;gene_id=NA12877_ch_G0000085;Parent=NA12877_ch_T0000353;transcript_name=NA12877_ch_T0000353;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000353:3;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5803194	5805187	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9;gene_id=NA12877_ch_G0000086;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000086;Name=FAM197Y9
NA12877_chrY	CAT	transcript	5803194	5805187	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000354;gene_id=NA12877_ch_G0000086;Parent=NA12877_ch_G0000086;transcript_name=NA12877_ch_T0000354;gene_name=FAM197Y9;ID=NA12877_ch_T0000354;Name=FAM197Y9
NA12877_chrY	CAT	exon	5803194	5803339	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000354;gene_id=NA12877_ch_G0000086;Parent=NA12877_ch_T0000354;transcript_name=NA12877_ch_T0000354;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000354:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5803340	5803451	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000354;gene_id=NA12877_ch_G0000086;Parent=NA12877_ch_T0000354;transcript_name=NA12877_ch_T0000354;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000354:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5803452	5803535	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000354;gene_id=NA12877_ch_G0000086;Parent=NA12877_ch_T0000354;transcript_name=NA12877_ch_T0000354;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000354:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5803536	5804877	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000354;gene_id=NA12877_ch_G0000086;Parent=NA12877_ch_T0000354;transcript_name=NA12877_ch_T0000354;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000354:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5804878	5805187	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000354;gene_id=NA12877_ch_G0000086;Parent=NA12877_ch_T0000354;transcript_name=NA12877_ch_T0000354;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000354:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5806186	5808868	.	+	.	source_gene_common_name=TSPY11P;source_gene=ENSG00000238235.1;gene_id=NA12877_ch_G0000087;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY11P;gene_sources=liftoff;ID=NA12877_ch_G0000087;Name=TSPY11P
NA12877_chrY	CAT	transcript	5806186	5808868	1000	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=NA12877_ch_T0000355;gene_id=NA12877_ch_G0000087;Parent=NA12877_ch_G0000087;transcript_name=NA12877_ch_T0000355;gene_name=TSPY11P;ID=NA12877_ch_T0000355;Name=TSPY11P
NA12877_chrY	CAT	exon	5806186	5806662	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=NA12877_ch_T0000355;gene_id=NA12877_ch_G0000087;Parent=NA12877_ch_T0000355;transcript_name=NA12877_ch_T0000355;gene_name=TSPY11P;ID=exon:NA12877_ch_T0000355:0;Name=TSPY11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5806663	5807268	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=NA12877_ch_T0000355;gene_id=NA12877_ch_G0000087;Parent=NA12877_ch_T0000355;transcript_name=NA12877_ch_T0000355;gene_name=TSPY11P;ID=intron:NA12877_ch_T0000355:0;Name=TSPY11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807269	5807346	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=NA12877_ch_T0000355;gene_id=NA12877_ch_G0000087;Parent=NA12877_ch_T0000355;transcript_name=NA12877_ch_T0000355;gene_name=TSPY11P;ID=exon:NA12877_ch_T0000355:1;Name=TSPY11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807347	5807474	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=NA12877_ch_T0000355;gene_id=NA12877_ch_G0000087;Parent=NA12877_ch_T0000355;transcript_name=NA12877_ch_T0000355;gene_name=TSPY11P;ID=intron:NA12877_ch_T0000355:1;Name=TSPY11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807475	5807585	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=NA12877_ch_T0000355;gene_id=NA12877_ch_G0000087;Parent=NA12877_ch_T0000355;transcript_name=NA12877_ch_T0000355;gene_name=TSPY11P;ID=exon:NA12877_ch_T0000355:2;Name=TSPY11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807586	5807684	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=NA12877_ch_T0000355;gene_id=NA12877_ch_G0000087;Parent=NA12877_ch_T0000355;transcript_name=NA12877_ch_T0000355;gene_name=TSPY11P;ID=intron:NA12877_ch_T0000355:2;Name=TSPY11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807685	5807827	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=NA12877_ch_T0000355;gene_id=NA12877_ch_G0000087;Parent=NA12877_ch_T0000355;transcript_name=NA12877_ch_T0000355;gene_name=TSPY11P;ID=exon:NA12877_ch_T0000355:3;Name=TSPY11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807828	5807934	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=NA12877_ch_T0000355;gene_id=NA12877_ch_G0000087;Parent=NA12877_ch_T0000355;transcript_name=NA12877_ch_T0000355;gene_name=TSPY11P;ID=intron:NA12877_ch_T0000355:3;Name=TSPY11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807935	5808023	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=NA12877_ch_T0000355;gene_id=NA12877_ch_G0000087;Parent=NA12877_ch_T0000355;transcript_name=NA12877_ch_T0000355;gene_name=TSPY11P;ID=exon:NA12877_ch_T0000355:4;Name=TSPY11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5808024	5808721	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=NA12877_ch_T0000355;gene_id=NA12877_ch_G0000087;Parent=NA12877_ch_T0000355;transcript_name=NA12877_ch_T0000355;gene_name=TSPY11P;ID=intron:NA12877_ch_T0000355:4;Name=TSPY11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5808722	5808868	.	+	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=NA12877_ch_T0000355;gene_id=NA12877_ch_G0000087;Parent=NA12877_ch_T0000355;transcript_name=NA12877_ch_T0000355;gene_name=TSPY11P;ID=exon:NA12877_ch_T0000355:5;Name=TSPY11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5806195	5814806	.	+	.	source_gene_common_name=ENSG00000296934;source_gene=ENSG00000296934.1;gene_id=NA12877_ch_G0000088;gene_biotype=lncRNA;gene_name=ENSG00000296934;gene_sources=liftoff;ID=NA12877_ch_G0000088;Name=ENSG00000296934
NA12877_chrY	CAT	transcript	5806195	5810527	1000	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000356;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_G0000088;transcript_name=NA12877_ch_T0000356;gene_name=ENSG00000296934;ID=NA12877_ch_T0000356;Name=ENSG00000296934
NA12877_chrY	CAT	exon	5806195	5807346	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000356;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000356;transcript_name=NA12877_ch_T0000356;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000356:0;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807347	5807474	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000356;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000356;transcript_name=NA12877_ch_T0000356;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000356:0;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807475	5807585	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000356;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000356;transcript_name=NA12877_ch_T0000356;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000356:1;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807586	5807684	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000356;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000356;transcript_name=NA12877_ch_T0000356;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000356:1;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807685	5807827	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000356;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000356;transcript_name=NA12877_ch_T0000356;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000356:2;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807828	5807934	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000356;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000356;transcript_name=NA12877_ch_T0000356;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000356:2;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807935	5808057	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000356;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000356;transcript_name=NA12877_ch_T0000356;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000356:3;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5808058	5808710	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000356;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000356;transcript_name=NA12877_ch_T0000356;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000356:3;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5808711	5808724	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000356;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000356;transcript_name=NA12877_ch_T0000356;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000356:4;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5808725	5810145	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000356;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000356;transcript_name=NA12877_ch_T0000356;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000356:4;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5810146	5810527	.	+	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000356;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000356;transcript_name=NA12877_ch_T0000356;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000356:5;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5806206	5809271	1000	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000357;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_G0000088;transcript_name=NA12877_ch_T0000357;gene_name=ENSG00000296934;ID=NA12877_ch_T0000357;Name=ENSG00000296934
NA12877_chrY	CAT	exon	5806206	5807346	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000357;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000357;transcript_name=NA12877_ch_T0000357;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000357:0;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807347	5807474	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000357;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000357;transcript_name=NA12877_ch_T0000357;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000357:0;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807475	5807585	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000357;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000357;transcript_name=NA12877_ch_T0000357;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000357:1;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807586	5807684	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000357;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000357;transcript_name=NA12877_ch_T0000357;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000357:1;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807685	5807827	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000357;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000357;transcript_name=NA12877_ch_T0000357;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000357:2;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807828	5807934	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000357;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000357;transcript_name=NA12877_ch_T0000357;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000357:2;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807935	5808057	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000357;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000357;transcript_name=NA12877_ch_T0000357;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000357:3;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5808058	5808710	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000357;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000357;transcript_name=NA12877_ch_T0000357;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000357:3;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5808711	5809271	.	+	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000357;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000357;transcript_name=NA12877_ch_T0000357;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000357:4;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5806206	5810695	1000	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_G0000088;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=NA12877_ch_T0000358;Name=ENSG00000296934
NA12877_chrY	CAT	exon	5806206	5806272	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000358:0;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5806273	5806695	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000358:0;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5806696	5806770	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000358:1;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5806771	5807225	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000358:1;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807226	5807346	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000358:2;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807347	5807474	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000358:2;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807475	5807585	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000358:3;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807586	5807934	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000358:3;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807935	5808057	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000358:4;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5808058	5808710	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000358:4;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5808711	5808724	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000358:5;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5808725	5810126	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000358:5;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5810127	5810695	.	+	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000358;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000358;transcript_name=NA12877_ch_T0000358;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000358:6;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5806218	5814806	1000	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000359;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_G0000088;transcript_name=NA12877_ch_T0000359;gene_name=ENSG00000296934;ID=NA12877_ch_T0000359;Name=ENSG00000296934
NA12877_chrY	CAT	exon	5806218	5806662	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000359;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000359;transcript_name=NA12877_ch_T0000359;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000359:0;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5806663	5807268	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000359;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000359;transcript_name=NA12877_ch_T0000359;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000359:0;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807269	5807346	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000359;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000359;transcript_name=NA12877_ch_T0000359;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000359:1;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807347	5807474	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000359;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000359;transcript_name=NA12877_ch_T0000359;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000359:1;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5807475	5807585	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000359;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000359;transcript_name=NA12877_ch_T0000359;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000359:2;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5807586	5814192	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000359;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000359;transcript_name=NA12877_ch_T0000359;gene_name=ENSG00000296934;ID=intron:NA12877_ch_T0000359:2;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5814193	5814806	.	+	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=NA12877_ch_T0000359;gene_id=NA12877_ch_G0000088;Parent=NA12877_ch_T0000359;transcript_name=NA12877_ch_T0000359;gene_name=ENSG00000296934;ID=exon:NA12877_ch_T0000359:3;Name=ENSG00000296934;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5813172	5813658	.	-	.	source_gene_common_name=ENSG00000275352;source_gene=ENSG00000275352.1;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;gene_id=NA12877_ch_G0000089;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000275352;gene_sources=liftoff;ID=NA12877_ch_G0000089;Name=ENSG00000275352
NA12877_chrY	CAT	transcript	5813172	5813658	1000	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=NA12877_ch_T0000360;gene_id=NA12877_ch_G0000089;Parent=NA12877_ch_G0000089;transcript_name=NA12877_ch_T0000360;gene_name=ENSG00000275352;ID=NA12877_ch_T0000360;Name=ENSG00000275352
NA12877_chrY	CAT	exon	5813172	5813254	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=NA12877_ch_T0000360;gene_id=NA12877_ch_G0000089;Parent=NA12877_ch_T0000360;transcript_name=NA12877_ch_T0000360;gene_name=ENSG00000275352;ID=exon:NA12877_ch_T0000360:0;Name=ENSG00000275352;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5813255	5813360	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=NA12877_ch_T0000360;gene_id=NA12877_ch_G0000089;Parent=NA12877_ch_T0000360;transcript_name=NA12877_ch_T0000360;gene_name=ENSG00000275352;ID=intron:NA12877_ch_T0000360:0;Name=ENSG00000275352;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5813361	5813505	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=NA12877_ch_T0000360;gene_id=NA12877_ch_G0000089;Parent=NA12877_ch_T0000360;transcript_name=NA12877_ch_T0000360;gene_name=ENSG00000275352;ID=exon:NA12877_ch_T0000360:1;Name=ENSG00000275352;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5813506	5813594	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=NA12877_ch_T0000360;gene_id=NA12877_ch_G0000089;Parent=NA12877_ch_T0000360;transcript_name=NA12877_ch_T0000360;gene_name=ENSG00000275352;ID=intron:NA12877_ch_T0000360:1;Name=ENSG00000275352;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5813595	5813658	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=NA12877_ch_T0000360;gene_id=NA12877_ch_G0000089;Parent=NA12877_ch_T0000360;transcript_name=NA12877_ch_T0000360;gene_name=ENSG00000275352;ID=exon:NA12877_ch_T0000360:2;Name=ENSG00000275352;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5843548	5844665	.	-	.	source_gene_common_name=TSPY19P;source_gene=ENSG00000234583.1;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;gene_id=NA12877_ch_G0000090;gene_biotype=unprocessed_pseudogene;gene_name=TSPY19P;gene_sources=liftoff;ID=NA12877_ch_G0000090;Name=TSPY19P
NA12877_chrY	CAT	transcript	5843548	5844665	1000	-	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=NA12877_ch_T0000361;gene_id=NA12877_ch_G0000090;Parent=NA12877_ch_G0000090;transcript_name=NA12877_ch_T0000361;gene_name=TSPY19P;ID=NA12877_ch_T0000361;Name=TSPY19P
NA12877_chrY	CAT	exon	5843548	5843580	.	-	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=NA12877_ch_T0000361;gene_id=NA12877_ch_G0000090;Parent=NA12877_ch_T0000361;transcript_name=NA12877_ch_T0000361;gene_name=TSPY19P;ID=exon:NA12877_ch_T0000361:0;Name=TSPY19P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5843581	5844189	.	-	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=NA12877_ch_T0000361;gene_id=NA12877_ch_G0000090;Parent=NA12877_ch_T0000361;transcript_name=NA12877_ch_T0000361;gene_name=TSPY19P;ID=intron:NA12877_ch_T0000361:0;Name=TSPY19P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5844190	5844665	.	-	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=NA12877_ch_T0000361;gene_id=NA12877_ch_G0000090;Parent=NA12877_ch_T0000361;transcript_name=NA12877_ch_T0000361;gene_name=TSPY19P;ID=exon:NA12877_ch_T0000361:1;Name=TSPY19P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5845633	5847793	.	+	.	source_gene_common_name=ENSG00000235094;source_gene=ENSG00000235094.3;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;gene_id=NA12877_ch_G0000091;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000235094;gene_sources=liftoff;ID=NA12877_ch_G0000091;Name=ENSG00000235094
NA12877_chrY	CAT	transcript	5845633	5847793	1000	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=NA12877_ch_T0000362;gene_id=NA12877_ch_G0000091;Parent=NA12877_ch_G0000091;transcript_name=NA12877_ch_T0000362;gene_name=ENSG00000235094;ID=NA12877_ch_T0000362;Name=ENSG00000235094
NA12877_chrY	CAT	exon	5845633	5845962	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=NA12877_ch_T0000362;gene_id=NA12877_ch_G0000091;Parent=NA12877_ch_T0000362;transcript_name=NA12877_ch_T0000362;gene_name=ENSG00000235094;ID=exon:NA12877_ch_T0000362:0;Name=ENSG00000235094;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5845963	5847013	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=NA12877_ch_T0000362;gene_id=NA12877_ch_G0000091;Parent=NA12877_ch_T0000362;transcript_name=NA12877_ch_T0000362;gene_name=ENSG00000235094;ID=intron:NA12877_ch_T0000362:0;Name=ENSG00000235094;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5847014	5847091	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=NA12877_ch_T0000362;gene_id=NA12877_ch_G0000091;Parent=NA12877_ch_T0000362;transcript_name=NA12877_ch_T0000362;gene_name=ENSG00000235094;ID=exon:NA12877_ch_T0000362:1;Name=ENSG00000235094;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5847092	5847286	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=NA12877_ch_T0000362;gene_id=NA12877_ch_G0000091;Parent=NA12877_ch_T0000362;transcript_name=NA12877_ch_T0000362;gene_name=ENSG00000235094;ID=intron:NA12877_ch_T0000362:1;Name=ENSG00000235094;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5847287	5847402	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=NA12877_ch_T0000362;gene_id=NA12877_ch_G0000091;Parent=NA12877_ch_T0000362;transcript_name=NA12877_ch_T0000362;gene_name=ENSG00000235094;ID=exon:NA12877_ch_T0000362:2;Name=ENSG00000235094;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5847403	5847488	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=NA12877_ch_T0000362;gene_id=NA12877_ch_G0000091;Parent=NA12877_ch_T0000362;transcript_name=NA12877_ch_T0000362;gene_name=ENSG00000235094;ID=intron:NA12877_ch_T0000362:2;Name=ENSG00000235094;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5847489	5847511	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=NA12877_ch_T0000362;gene_id=NA12877_ch_G0000091;Parent=NA12877_ch_T0000362;transcript_name=NA12877_ch_T0000362;gene_name=ENSG00000235094;ID=exon:NA12877_ch_T0000362:3;Name=ENSG00000235094;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5847512	5847747	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=NA12877_ch_T0000362;gene_id=NA12877_ch_G0000091;Parent=NA12877_ch_T0000362;transcript_name=NA12877_ch_T0000362;gene_name=ENSG00000235094;ID=intron:NA12877_ch_T0000362:3;Name=ENSG00000235094;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5847748	5847793	.	+	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2,ENST00000445200.2;transcript_id=NA12877_ch_T0000362;gene_id=NA12877_ch_G0000091;Parent=NA12877_ch_T0000362;transcript_name=NA12877_ch_T0000362;gene_name=ENSG00000235094;ID=exon:NA12877_ch_T0000362:4;Name=ENSG00000235094;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5855788	5882191	.	+	.	source_gene_common_name=ENSG00000295986;source_gene=ENSG00000295986.1;gene_id=NA12877_ch_G0000092;gene_biotype=lncRNA;gene_name=ENSG00000295986;gene_sources=liftoff;ID=NA12877_ch_G0000092;Name=ENSG00000295986
NA12877_chrY	CAT	transcript	5855788	5882191	1000	+	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=NA12877_ch_T0000363;gene_id=NA12877_ch_G0000092;Parent=NA12877_ch_G0000092;transcript_name=NA12877_ch_T0000363;gene_name=ENSG00000295986;ID=NA12877_ch_T0000363;Name=ENSG00000295986
NA12877_chrY	CAT	exon	5855788	5856271	.	+	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=NA12877_ch_T0000363;gene_id=NA12877_ch_G0000092;Parent=NA12877_ch_T0000363;transcript_name=NA12877_ch_T0000363;gene_name=ENSG00000295986;ID=exon:NA12877_ch_T0000363:0;Name=ENSG00000295986;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5856272	5878369	.	+	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=NA12877_ch_T0000363;gene_id=NA12877_ch_G0000092;Parent=NA12877_ch_T0000363;transcript_name=NA12877_ch_T0000363;gene_name=ENSG00000295986;ID=intron:NA12877_ch_T0000363:0;Name=ENSG00000295986;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5878370	5878485	.	+	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=NA12877_ch_T0000363;gene_id=NA12877_ch_G0000092;Parent=NA12877_ch_T0000363;transcript_name=NA12877_ch_T0000363;gene_name=ENSG00000295986;ID=exon:NA12877_ch_T0000363:1;Name=ENSG00000295986;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5878486	5882121	.	+	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=NA12877_ch_T0000363;gene_id=NA12877_ch_G0000092;Parent=NA12877_ch_T0000363;transcript_name=NA12877_ch_T0000363;gene_name=ENSG00000295986;ID=intron:NA12877_ch_T0000363:1;Name=ENSG00000295986;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5882122	5882191	.	+	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=NA12877_ch_T0000363;gene_id=NA12877_ch_G0000092;Parent=NA12877_ch_T0000363;transcript_name=NA12877_ch_T0000363;gene_name=ENSG00000295986;ID=exon:NA12877_ch_T0000363:2;Name=ENSG00000295986;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5867643	5882914	.	+	.	source_gene_common_name=RBMY2GP;source_gene=ENSG00000223744.1;gene_id=NA12877_ch_G0000093;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2GP;gene_sources=liftoff;ID=NA12877_ch_G0000093;Name=RBMY2GP
NA12877_chrY	CAT	transcript	5867643	5882914	1000	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_G0000093;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=NA12877_ch_T0000364;Name=RBMY2GP
NA12877_chrY	CAT	exon	5867643	5867820	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=exon:NA12877_ch_T0000364:0;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5867821	5878335	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=intron:NA12877_ch_T0000364:0;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5878336	5878485	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=exon:NA12877_ch_T0000364:1;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5878486	5880485	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=intron:NA12877_ch_T0000364:1;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5880486	5880585	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=exon:NA12877_ch_T0000364:2;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5880586	5881392	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=intron:NA12877_ch_T0000364:2;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5881393	5881503	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=exon:NA12877_ch_T0000364:3;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5881504	5881900	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=intron:NA12877_ch_T0000364:3;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5881901	5882011	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=exon:NA12877_ch_T0000364:4;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5882012	5882121	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=intron:NA12877_ch_T0000364:4;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5882122	5882203	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=exon:NA12877_ch_T0000364:5;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5882204	5882612	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=intron:NA12877_ch_T0000364:5;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5882613	5882914	.	+	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=NA12877_ch_T0000364;gene_id=NA12877_ch_G0000093;Parent=NA12877_ch_T0000364;transcript_name=NA12877_ch_T0000364;gene_name=RBMY2GP;ID=exon:NA12877_ch_T0000364:6;Name=RBMY2GP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5896810	5909525	.	-	.	source_gene_common_name=LINC00280;source_gene=ENSG00000229643.2;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;gene_id=NA12877_ch_G0000094;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=NA12877_ch_G0000094;Name=LINC00280
NA12877_chrY	CAT	transcript	5896810	5901016	1000	-	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=NA12877_ch_T0000365;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_G0000094;transcript_name=NA12877_ch_T0000365;gene_name=LINC00280;ID=NA12877_ch_T0000365;Name=LINC00280
NA12877_chrY	CAT	exon	5896810	5897028	.	-	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=NA12877_ch_T0000365;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_T0000365;transcript_name=NA12877_ch_T0000365;gene_name=LINC00280;ID=exon:NA12877_ch_T0000365:0;Name=LINC00280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5897029	5898286	.	-	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=NA12877_ch_T0000365;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_T0000365;transcript_name=NA12877_ch_T0000365;gene_name=LINC00280;ID=intron:NA12877_ch_T0000365:0;Name=LINC00280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5898287	5898429	.	-	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=NA12877_ch_T0000365;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_T0000365;transcript_name=NA12877_ch_T0000365;gene_name=LINC00280;ID=exon:NA12877_ch_T0000365:1;Name=LINC00280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5898430	5900930	.	-	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=NA12877_ch_T0000365;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_T0000365;transcript_name=NA12877_ch_T0000365;gene_name=LINC00280;ID=intron:NA12877_ch_T0000365:1;Name=LINC00280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5900931	5901016	.	-	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=NA12877_ch_T0000365;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_T0000365;transcript_name=NA12877_ch_T0000365;gene_name=LINC00280;ID=exon:NA12877_ch_T0000365:2;Name=LINC00280;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5900165	5909525	1000	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=NA12877_ch_T0000366;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_G0000094;transcript_name=NA12877_ch_T0000366;gene_name=LINC00280;ID=NA12877_ch_T0000366;Name=LINC00280
NA12877_chrY	CAT	exon	5900165	5902024	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=NA12877_ch_T0000366;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_T0000366;transcript_name=NA12877_ch_T0000366;gene_name=LINC00280;ID=exon:NA12877_ch_T0000366:0;Name=LINC00280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5902025	5906113	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=NA12877_ch_T0000366;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_T0000366;transcript_name=NA12877_ch_T0000366;gene_name=LINC00280;ID=intron:NA12877_ch_T0000366:0;Name=LINC00280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5906114	5906366	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=NA12877_ch_T0000366;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_T0000366;transcript_name=NA12877_ch_T0000366;gene_name=LINC00280;ID=exon:NA12877_ch_T0000366:1;Name=LINC00280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5906367	5908907	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=NA12877_ch_T0000366;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_T0000366;transcript_name=NA12877_ch_T0000366;gene_name=LINC00280;ID=intron:NA12877_ch_T0000366:1;Name=LINC00280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5908908	5908980	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=NA12877_ch_T0000366;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_T0000366;transcript_name=NA12877_ch_T0000366;gene_name=LINC00280;ID=exon:NA12877_ch_T0000366:2;Name=LINC00280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5908981	5909356	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=NA12877_ch_T0000366;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_T0000366;transcript_name=NA12877_ch_T0000366;gene_name=LINC00280;ID=intron:NA12877_ch_T0000366:2;Name=LINC00280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5909357	5909525	.	-	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=NA12877_ch_T0000366;gene_id=NA12877_ch_G0000094;Parent=NA12877_ch_T0000366;transcript_name=NA12877_ch_T0000366;gene_name=LINC00280;ID=exon:NA12877_ch_T0000366:3;Name=LINC00280;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5914249	5920738	.	-	.	source_gene_common_name=ENSG00000303345;source_gene=ENSG00000303345.1;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;gene_id=NA12877_ch_G0000095;gene_biotype=lncRNA;gene_name=ENSG00000303345;gene_sources=liftoff;ID=NA12877_ch_G0000095;Name=ENSG00000303345
NA12877_chrY	CAT	transcript	5914249	5920738	1000	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=NA12877_ch_T0000367;gene_id=NA12877_ch_G0000095;Parent=NA12877_ch_G0000095;transcript_name=NA12877_ch_T0000367;gene_name=ENSG00000303345;ID=NA12877_ch_T0000367;Name=ENSG00000303345
NA12877_chrY	CAT	exon	5914249	5914632	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=NA12877_ch_T0000367;gene_id=NA12877_ch_G0000095;Parent=NA12877_ch_T0000367;transcript_name=NA12877_ch_T0000367;gene_name=ENSG00000303345;ID=exon:NA12877_ch_T0000367:0;Name=ENSG00000303345;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5914633	5916873	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=NA12877_ch_T0000367;gene_id=NA12877_ch_G0000095;Parent=NA12877_ch_T0000367;transcript_name=NA12877_ch_T0000367;gene_name=ENSG00000303345;ID=intron:NA12877_ch_T0000367:0;Name=ENSG00000303345;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5916874	5917029	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=NA12877_ch_T0000367;gene_id=NA12877_ch_G0000095;Parent=NA12877_ch_T0000367;transcript_name=NA12877_ch_T0000367;gene_name=ENSG00000303345;ID=exon:NA12877_ch_T0000367:1;Name=ENSG00000303345;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5917030	5920392	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=NA12877_ch_T0000367;gene_id=NA12877_ch_G0000095;Parent=NA12877_ch_T0000367;transcript_name=NA12877_ch_T0000367;gene_name=ENSG00000303345;ID=intron:NA12877_ch_T0000367:1;Name=ENSG00000303345;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5920393	5920479	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=NA12877_ch_T0000367;gene_id=NA12877_ch_G0000095;Parent=NA12877_ch_T0000367;transcript_name=NA12877_ch_T0000367;gene_name=ENSG00000303345;ID=exon:NA12877_ch_T0000367:2;Name=ENSG00000303345;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5920480	5920682	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=NA12877_ch_T0000367;gene_id=NA12877_ch_G0000095;Parent=NA12877_ch_T0000367;transcript_name=NA12877_ch_T0000367;gene_name=ENSG00000303345;ID=intron:NA12877_ch_T0000367:2;Name=ENSG00000303345;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5920683	5920738	.	-	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=NA12877_ch_T0000367;gene_id=NA12877_ch_G0000095;Parent=NA12877_ch_T0000367;transcript_name=NA12877_ch_T0000367;gene_name=ENSG00000303345;ID=exon:NA12877_ch_T0000367:3;Name=ENSG00000303345;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5929995	5951169	.	+	.	source_gene_common_name=TTTY1B;source_gene=ENSG00000129816.6;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;gene_id=NA12877_ch_G0000096;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=NA12877_ch_G0000096;Name=TTTY1B
NA12877_chrY	CAT	transcript	5929995	5945169	1000	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=NA12877_ch_T0000368;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_G0000096;transcript_name=NA12877_ch_T0000368;gene_name=TTTY1B;ID=NA12877_ch_T0000368;Name=TTTY1B
NA12877_chrY	CAT	exon	5929995	5930280	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=NA12877_ch_T0000368;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000368;transcript_name=NA12877_ch_T0000368;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000368:0;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5930281	5933704	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=NA12877_ch_T0000368;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000368;transcript_name=NA12877_ch_T0000368;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000368:0;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5933705	5933864	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=NA12877_ch_T0000368;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000368;transcript_name=NA12877_ch_T0000368;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000368:1;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5933865	5940727	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=NA12877_ch_T0000368;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000368;transcript_name=NA12877_ch_T0000368;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000368:1;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5940728	5940886	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=NA12877_ch_T0000368;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000368;transcript_name=NA12877_ch_T0000368;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000368:2;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5940887	5945011	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=NA12877_ch_T0000368;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000368;transcript_name=NA12877_ch_T0000368;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000368:2;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5945012	5945169	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735679.1,ENST00000735679.1;transcript_id=NA12877_ch_T0000368;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000368;transcript_name=NA12877_ch_T0000368;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000368:3;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5930023	5951169	1000	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=NA12877_ch_T0000369;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_G0000096;transcript_name=NA12877_ch_T0000369;gene_name=TTTY1B;ID=NA12877_ch_T0000369;Name=TTTY1B
NA12877_chrY	CAT	exon	5930023	5930280	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=NA12877_ch_T0000369;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000369;transcript_name=NA12877_ch_T0000369;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000369:0;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5930281	5940727	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=NA12877_ch_T0000369;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000369;transcript_name=NA12877_ch_T0000369;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000369:0;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5940728	5940886	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=NA12877_ch_T0000369;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000369;transcript_name=NA12877_ch_T0000369;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000369:1;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5940887	5942457	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=NA12877_ch_T0000369;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000369;transcript_name=NA12877_ch_T0000369;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000369:1;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5942458	5942544	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=NA12877_ch_T0000369;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000369;transcript_name=NA12877_ch_T0000369;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000369:2;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5942545	5943192	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=NA12877_ch_T0000369;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000369;transcript_name=NA12877_ch_T0000369;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000369:2;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5943193	5943330	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=NA12877_ch_T0000369;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000369;transcript_name=NA12877_ch_T0000369;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000369:3;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5943331	5948437	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=NA12877_ch_T0000369;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000369;transcript_name=NA12877_ch_T0000369;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000369:3;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5948438	5948581	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=NA12877_ch_T0000369;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000369;transcript_name=NA12877_ch_T0000369;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000369:4;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5948582	5950911	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=NA12877_ch_T0000369;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000369;transcript_name=NA12877_ch_T0000369;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000369:4;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950912	5951169	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735677.1,ENST00000735677.1;transcript_id=NA12877_ch_T0000369;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000369;transcript_name=NA12877_ch_T0000369;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000369:5;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5930023	5945176	1000	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735680.1,ENST00000735680.1;transcript_id=NA12877_ch_T0000370;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_G0000096;transcript_name=NA12877_ch_T0000370;gene_name=TTTY1B;ID=NA12877_ch_T0000370;Name=TTTY1B
NA12877_chrY	CAT	exon	5930023	5930280	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735680.1,ENST00000735680.1;transcript_id=NA12877_ch_T0000370;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000370;transcript_name=NA12877_ch_T0000370;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000370:0;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5930281	5940727	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735680.1,ENST00000735680.1;transcript_id=NA12877_ch_T0000370;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000370;transcript_name=NA12877_ch_T0000370;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000370:0;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5940728	5940886	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735680.1,ENST00000735680.1;transcript_id=NA12877_ch_T0000370;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000370;transcript_name=NA12877_ch_T0000370;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000370:1;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5940887	5945011	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735680.1,ENST00000735680.1;transcript_id=NA12877_ch_T0000370;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000370;transcript_name=NA12877_ch_T0000370;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000370:1;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5945012	5945176	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735680.1,ENST00000735680.1;transcript_id=NA12877_ch_T0000370;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000370;transcript_name=NA12877_ch_T0000370;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000370:2;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5930036	5951169	1000	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=NA12877_ch_T0000371;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_G0000096;transcript_name=NA12877_ch_T0000371;gene_name=TTTY1B;ID=NA12877_ch_T0000371;Name=TTTY1B
NA12877_chrY	CAT	exon	5930036	5930280	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=NA12877_ch_T0000371;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000371;transcript_name=NA12877_ch_T0000371;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000371:0;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5930281	5933704	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=NA12877_ch_T0000371;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000371;transcript_name=NA12877_ch_T0000371;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000371:0;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5933705	5933864	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=NA12877_ch_T0000371;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000371;transcript_name=NA12877_ch_T0000371;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000371:1;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5933865	5940727	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=NA12877_ch_T0000371;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000371;transcript_name=NA12877_ch_T0000371;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000371:1;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5940728	5940836	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=NA12877_ch_T0000371;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000371;transcript_name=NA12877_ch_T0000371;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000371:2;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5940837	5943192	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=NA12877_ch_T0000371;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000371;transcript_name=NA12877_ch_T0000371;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000371:2;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5943193	5943330	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=NA12877_ch_T0000371;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000371;transcript_name=NA12877_ch_T0000371;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000371:3;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5943331	5950911	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=NA12877_ch_T0000371;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000371;transcript_name=NA12877_ch_T0000371;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000371:3;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950912	5951169	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=NA12877_ch_T0000371;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000371;transcript_name=NA12877_ch_T0000371;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000371:4;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5930041	5936314	1000	+	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735682.1,ENST00000735682.1;transcript_id=NA12877_ch_T0000372;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_G0000096;transcript_name=NA12877_ch_T0000372;gene_name=TTTY1B;ID=NA12877_ch_T0000372;Name=TTTY1B
NA12877_chrY	CAT	exon	5930041	5930280	.	+	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735682.1,ENST00000735682.1;transcript_id=NA12877_ch_T0000372;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000372;transcript_name=NA12877_ch_T0000372;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000372:0;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5930281	5936066	.	+	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735682.1,ENST00000735682.1;transcript_id=NA12877_ch_T0000372;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000372;transcript_name=NA12877_ch_T0000372;gene_name=TTTY1B;ID=intron:NA12877_ch_T0000372:0;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5936067	5936314	.	+	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000735682.1,ENST00000735682.1;transcript_id=NA12877_ch_T0000372;gene_id=NA12877_ch_G0000096;Parent=NA12877_ch_T0000372;transcript_name=NA12877_ch_T0000372;gene_name=TTTY1B;ID=exon:NA12877_ch_T0000372:1;Name=TTTY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5945664	6001697	.	-	.	source_gene_common_name=TTTY2B;source_gene=ENSG00000212856.7;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;gene_id=NA12877_ch_G0000097;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=NA12877_ch_G0000097;Name=TTTY2B
NA12877_chrY	CAT	transcript	5945664	5985252	1000	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=NA12877_ch_T0000373;Name=TTTY2B
NA12877_chrY	CAT	exon	5945664	5946528	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000373:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000373:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000373:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5950978	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000373:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000373:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951748	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000373:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951749	5951976	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000373:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5959370	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000373:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5959371	5959457	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000373:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5959458	5959808	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000373:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5959809	5959913	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000373:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5959914	5961933	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000373:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5961934	5962011	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000373:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5962012	5968536	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000373:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5968537	5968747	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000373:7;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5968748	5968921	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000373:7;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5968922	5969009	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000373:8;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5969010	5985051	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000373:8;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5985052	5985252	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=NA12877_ch_T0000373;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000373;transcript_name=NA12877_ch_T0000373;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000373:9;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5945664	5968057	1000	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=NA12877_ch_T0000374;Name=TTTY2B
NA12877_chrY	CAT	exon	5945664	5946528	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000374:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000374:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000374:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5950978	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000374:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000374:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951827	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000374:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951828	5951976	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000374:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5959370	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000374:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5959371	5959457	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000374:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5959458	5959808	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000374:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5959809	5959913	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000374:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5959914	5961933	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000374:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5961934	5962011	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000374:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5962012	5967845	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000374:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5967846	5968057	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=NA12877_ch_T0000374;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000374;transcript_name=NA12877_ch_T0000374;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000374:7;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5945664	5968056	1000	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=NA12877_ch_T0000375;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000375;gene_name=TTTY2B;ID=NA12877_ch_T0000375;Name=TTTY2B
NA12877_chrY	CAT	exon	5945664	5946528	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=NA12877_ch_T0000375;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000375;transcript_name=NA12877_ch_T0000375;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000375:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=NA12877_ch_T0000375;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000375;transcript_name=NA12877_ch_T0000375;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000375:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=NA12877_ch_T0000375;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000375;transcript_name=NA12877_ch_T0000375;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000375:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5950978	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=NA12877_ch_T0000375;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000375;transcript_name=NA12877_ch_T0000375;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000375:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=NA12877_ch_T0000375;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000375;transcript_name=NA12877_ch_T0000375;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000375:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951827	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=NA12877_ch_T0000375;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000375;transcript_name=NA12877_ch_T0000375;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000375:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951828	5951976	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=NA12877_ch_T0000375;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000375;transcript_name=NA12877_ch_T0000375;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000375:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5961933	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=NA12877_ch_T0000375;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000375;transcript_name=NA12877_ch_T0000375;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000375:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5961934	5962011	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=NA12877_ch_T0000375;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000375;transcript_name=NA12877_ch_T0000375;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000375:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5962012	5967845	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=NA12877_ch_T0000375;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000375;transcript_name=NA12877_ch_T0000375;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000375:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5967846	5968056	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=NA12877_ch_T0000375;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000375;transcript_name=NA12877_ch_T0000375;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000375:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5945664	5968056	1000	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=NA12877_ch_T0000376;Name=TTTY2B
NA12877_chrY	CAT	exon	5945664	5946528	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000376:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000376:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000376:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5948069	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000376:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5948070	5948148	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000376:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5948149	5949781	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000376:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5949782	5949999	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000376:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5950000	5950362	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000376:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950363	5950457	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000376:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5950458	5950978	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000376:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000376:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951748	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000376:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951749	5951976	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000376:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5961933	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000376:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5961934	5962011	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000376:7;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5962012	5967851	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000376:7;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5967852	5968056	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=NA12877_ch_T0000376;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000376;transcript_name=NA12877_ch_T0000376;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000376:8;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5945664	5968044	1000	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=NA12877_ch_T0000377;Name=TTTY2B
NA12877_chrY	CAT	exon	5945664	5946528	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000377:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000377:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000377:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5948069	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000377:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5948070	5948148	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000377:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5948149	5950978	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000377:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000377:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951827	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000377:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951828	5951976	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000377:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5959370	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000377:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5959371	5959457	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000377:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5959458	5961933	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000377:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5961934	5962011	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000377:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5962012	5967845	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000377:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5967846	5968044	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=NA12877_ch_T0000377;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000377;transcript_name=NA12877_ch_T0000377;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000377:7;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5945664	5954225	1000	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=NA12877_ch_T0000378;Name=TTTY2B
NA12877_chrY	CAT	exon	5945664	5946528	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000378:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000378:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000378:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5948069	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000378:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5948070	5948148	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000378:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5948149	5949781	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000378:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5949782	5949999	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000378:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5950000	5950978	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000378:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000378:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951827	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000378:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951828	5951976	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000378:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5952268	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000378:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5952269	5952355	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000378:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5952356	5954088	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000378:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5954089	5954225	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=NA12877_ch_T0000378;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000378;transcript_name=NA12877_ch_T0000378;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000378:7;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5945849	5963751	1000	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=NA12877_ch_T0000379;Name=TTTY2B
NA12877_chrY	CAT	exon	5945849	5946528	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000379:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000379:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000379:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5948069	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000379:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5948070	5948148	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000379:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5948149	5950978	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000379:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000379:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951827	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000379:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951828	5951976	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000379:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5959370	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000379:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5959371	5959457	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000379:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5959458	5961933	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000379:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5961934	5963751	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=NA12877_ch_T0000379;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000379;transcript_name=NA12877_ch_T0000379;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000379:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5945849	5985268	1000	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=NA12877_ch_T0000380;Name=TTTY2B
NA12877_chrY	CAT	exon	5945849	5946528	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000380:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000380:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000380:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5948069	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000380:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5948070	5948148	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000380:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5948149	5950978	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000380:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000380:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951827	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000380:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951828	5951976	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000380:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5961933	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000380:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5961934	5962011	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000380:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5962012	5968536	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000380:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5968537	5968747	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000380:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5968748	5985051	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000380:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5985052	5985268	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=NA12877_ch_T0000380;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000380;transcript_name=NA12877_ch_T0000380;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000380:7;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5945849	5954230	1000	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=NA12877_ch_T0000381;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000381;gene_name=TTTY2B;ID=NA12877_ch_T0000381;Name=TTTY2B
NA12877_chrY	CAT	exon	5945849	5946528	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=NA12877_ch_T0000381;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000381;transcript_name=NA12877_ch_T0000381;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000381:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=NA12877_ch_T0000381;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000381;transcript_name=NA12877_ch_T0000381;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000381:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=NA12877_ch_T0000381;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000381;transcript_name=NA12877_ch_T0000381;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000381:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5950978	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=NA12877_ch_T0000381;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000381;transcript_name=NA12877_ch_T0000381;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000381:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=NA12877_ch_T0000381;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000381;transcript_name=NA12877_ch_T0000381;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000381:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951827	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=NA12877_ch_T0000381;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000381;transcript_name=NA12877_ch_T0000381;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000381:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951828	5951976	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=NA12877_ch_T0000381;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000381;transcript_name=NA12877_ch_T0000381;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000381:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5952268	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=NA12877_ch_T0000381;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000381;transcript_name=NA12877_ch_T0000381;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000381:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5952269	5952355	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=NA12877_ch_T0000381;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000381;transcript_name=NA12877_ch_T0000381;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000381:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5952356	5954094	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=NA12877_ch_T0000381;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000381;transcript_name=NA12877_ch_T0000381;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000381:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5954095	5954230	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=NA12877_ch_T0000381;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000381;transcript_name=NA12877_ch_T0000381;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000381:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5945852	6001697	1000	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=NA12877_ch_T0000382;Name=TTTY2B
NA12877_chrY	CAT	exon	5945852	5946528	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000382:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5950978	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000382:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951827	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000382:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951828	5951976	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5961933	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000382:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5961934	5962011	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5962012	5968536	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000382:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5968537	5968747	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5968748	5968921	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000382:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5968922	5969009	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5969010	5985051	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000382:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5985052	5985958	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:7;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5985959	5988942	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000382:7;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5988943	5989163	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:8;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5989164	5990098	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000382:8;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990099	5990266	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:9;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5990267	5991425	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000382:9;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5991426	5991607	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:10;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5991608	5995553	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000382:10;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5995554	5995692	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:11;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5995693	6000930	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000382:11;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6000931	6001697	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=NA12877_ch_T0000382;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000382;transcript_name=NA12877_ch_T0000382;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000382:12;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5945853	5968044	1000	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=NA12877_ch_T0000383;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000383;gene_name=TTTY2B;ID=NA12877_ch_T0000383;Name=TTTY2B
NA12877_chrY	CAT	exon	5945853	5946528	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=NA12877_ch_T0000383;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000383;transcript_name=NA12877_ch_T0000383;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000383:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=NA12877_ch_T0000383;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000383;transcript_name=NA12877_ch_T0000383;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000383:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=NA12877_ch_T0000383;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000383;transcript_name=NA12877_ch_T0000383;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000383:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5950978	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=NA12877_ch_T0000383;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000383;transcript_name=NA12877_ch_T0000383;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000383:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=NA12877_ch_T0000383;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000383;transcript_name=NA12877_ch_T0000383;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000383:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951748	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=NA12877_ch_T0000383;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000383;transcript_name=NA12877_ch_T0000383;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000383:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951749	5951976	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=NA12877_ch_T0000383;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000383;transcript_name=NA12877_ch_T0000383;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000383:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5961933	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=NA12877_ch_T0000383;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000383;transcript_name=NA12877_ch_T0000383;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000383:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5961934	5962011	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=NA12877_ch_T0000383;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000383;transcript_name=NA12877_ch_T0000383;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000383:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5962012	5967845	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=NA12877_ch_T0000383;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000383;transcript_name=NA12877_ch_T0000383;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000383:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5967846	5968044	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=NA12877_ch_T0000383;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000383;transcript_name=NA12877_ch_T0000383;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000383:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5945853	5954215	1000	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=NA12877_ch_T0000384;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000384;gene_name=TTTY2B;ID=NA12877_ch_T0000384;Name=TTTY2B
NA12877_chrY	CAT	exon	5945853	5946528	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=NA12877_ch_T0000384;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000384;transcript_name=NA12877_ch_T0000384;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000384:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=NA12877_ch_T0000384;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000384;transcript_name=NA12877_ch_T0000384;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000384:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=NA12877_ch_T0000384;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000384;transcript_name=NA12877_ch_T0000384;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000384:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5950978	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=NA12877_ch_T0000384;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000384;transcript_name=NA12877_ch_T0000384;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000384:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=NA12877_ch_T0000384;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000384;transcript_name=NA12877_ch_T0000384;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000384:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951827	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=NA12877_ch_T0000384;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000384;transcript_name=NA12877_ch_T0000384;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000384:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951828	5951976	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=NA12877_ch_T0000384;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000384;transcript_name=NA12877_ch_T0000384;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000384:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5954088	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=NA12877_ch_T0000384;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000384;transcript_name=NA12877_ch_T0000384;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000384:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5954089	5954215	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=NA12877_ch_T0000384;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000384;transcript_name=NA12877_ch_T0000384;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000384:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5946385	5968020	1000	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=NA12877_ch_T0000385;Name=TTTY2B
NA12877_chrY	CAT	exon	5946385	5946528	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000385:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5946529	5947751	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000385:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5947752	5947949	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000385:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5947950	5948069	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000385:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5948070	5948148	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000385:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5948149	5950978	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000385:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5950979	5951135	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000385:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951827	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000385:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951828	5951976	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000385:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5961933	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000385:4;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5961934	5962011	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000385:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5962012	5967845	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000385:5;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5967846	5968020	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=NA12877_ch_T0000385;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000385;transcript_name=NA12877_ch_T0000385;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000385:6;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5950887	5992018	1000	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=NA12877_ch_T0000386;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_G0000097;transcript_name=NA12877_ch_T0000386;gene_name=TTTY2B;ID=NA12877_ch_T0000386;Name=TTTY2B
NA12877_chrY	CAT	exon	5950887	5951135	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=NA12877_ch_T0000386;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000386;transcript_name=NA12877_ch_T0000386;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000386:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951136	5951827	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=NA12877_ch_T0000386;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000386;transcript_name=NA12877_ch_T0000386;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000386:0;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5951828	5951976	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=NA12877_ch_T0000386;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000386;transcript_name=NA12877_ch_T0000386;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000386:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5951977	5991425	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=NA12877_ch_T0000386;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000386;transcript_name=NA12877_ch_T0000386;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000386:1;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5991426	5991607	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=NA12877_ch_T0000386;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000386;transcript_name=NA12877_ch_T0000386;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000386:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5991608	5991955	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=NA12877_ch_T0000386;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000386;transcript_name=NA12877_ch_T0000386;gene_name=TTTY2B;ID=intron:NA12877_ch_T0000386:2;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5991956	5992018	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=NA12877_ch_T0000386;gene_id=NA12877_ch_G0000097;Parent=NA12877_ch_T0000386;transcript_name=NA12877_ch_T0000386;gene_name=TTTY2B;ID=exon:NA12877_ch_T0000386:3;Name=TTTY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	5980472	5997512	.	+	.	source_gene_common_name=TTTY7;source_gene=ENSG00000147753.11;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;gene_id=NA12877_ch_G0000098;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=NA12877_ch_G0000098;Name=TTTY7
NA12877_chrY	CAT	transcript	5980472	5990294	1000	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=NA12877_ch_T0000387;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000387;gene_name=TTTY7;ID=NA12877_ch_T0000387;Name=TTTY7
NA12877_chrY	CAT	exon	5980472	5980724	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=NA12877_ch_T0000387;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000387;transcript_name=NA12877_ch_T0000387;gene_name=TTTY7;ID=exon:NA12877_ch_T0000387:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5980725	5984365	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=NA12877_ch_T0000387;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000387;transcript_name=NA12877_ch_T0000387;gene_name=TTTY7;ID=intron:NA12877_ch_T0000387:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5984366	5984523	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=NA12877_ch_T0000387;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000387;transcript_name=NA12877_ch_T0000387;gene_name=TTTY7;ID=exon:NA12877_ch_T0000387:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5984524	5990131	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=NA12877_ch_T0000387;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000387;transcript_name=NA12877_ch_T0000387;gene_name=TTTY7;ID=intron:NA12877_ch_T0000387:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990132	5990294	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=NA12877_ch_T0000387;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000387;transcript_name=NA12877_ch_T0000387;gene_name=TTTY7;ID=exon:NA12877_ch_T0000387:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5982929	5990303	1000	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=NA12877_ch_T0000388;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000388;gene_name=TTTY7;ID=NA12877_ch_T0000388;Name=TTTY7
NA12877_chrY	CAT	exon	5982929	5983241	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=NA12877_ch_T0000388;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000388;transcript_name=NA12877_ch_T0000388;gene_name=TTTY7;ID=exon:NA12877_ch_T0000388:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5983242	5984365	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=NA12877_ch_T0000388;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000388;transcript_name=NA12877_ch_T0000388;gene_name=TTTY7;ID=intron:NA12877_ch_T0000388:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5984366	5984523	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=NA12877_ch_T0000388;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000388;transcript_name=NA12877_ch_T0000388;gene_name=TTTY7;ID=exon:NA12877_ch_T0000388:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5984524	5990131	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=NA12877_ch_T0000388;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000388;transcript_name=NA12877_ch_T0000388;gene_name=TTTY7;ID=intron:NA12877_ch_T0000388:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990132	5990303	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=NA12877_ch_T0000388;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000388;transcript_name=NA12877_ch_T0000388;gene_name=TTTY7;ID=exon:NA12877_ch_T0000388:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5982950	5990302	1000	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=NA12877_ch_T0000389;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000389;gene_name=TTTY7;ID=NA12877_ch_T0000389;Name=TTTY7
NA12877_chrY	CAT	exon	5982950	5983241	.	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=NA12877_ch_T0000389;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000389;transcript_name=NA12877_ch_T0000389;gene_name=TTTY7;ID=exon:NA12877_ch_T0000389:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5983242	5990131	.	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=NA12877_ch_T0000389;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000389;transcript_name=NA12877_ch_T0000389;gene_name=TTTY7;ID=intron:NA12877_ch_T0000389:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990132	5990302	.	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=NA12877_ch_T0000389;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000389;transcript_name=NA12877_ch_T0000389;gene_name=TTTY7;ID=exon:NA12877_ch_T0000389:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5982951	5997512	1000	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=NA12877_ch_T0000390;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000390;gene_name=TTTY7;ID=NA12877_ch_T0000390;Name=TTTY7
NA12877_chrY	CAT	exon	5982951	5983241	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=NA12877_ch_T0000390;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000390;transcript_name=NA12877_ch_T0000390;gene_name=TTTY7;ID=exon:NA12877_ch_T0000390:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5983242	5984365	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=NA12877_ch_T0000390;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000390;transcript_name=NA12877_ch_T0000390;gene_name=TTTY7;ID=intron:NA12877_ch_T0000390:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5984366	5984523	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=NA12877_ch_T0000390;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000390;transcript_name=NA12877_ch_T0000390;gene_name=TTTY7;ID=exon:NA12877_ch_T0000390:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5984524	5990131	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=NA12877_ch_T0000390;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000390;transcript_name=NA12877_ch_T0000390;gene_name=TTTY7;ID=intron:NA12877_ch_T0000390:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990132	5990213	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=NA12877_ch_T0000390;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000390;transcript_name=NA12877_ch_T0000390;gene_name=TTTY7;ID=exon:NA12877_ch_T0000390:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5990214	5992433	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=NA12877_ch_T0000390;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000390;transcript_name=NA12877_ch_T0000390;gene_name=TTTY7;ID=intron:NA12877_ch_T0000390:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5992434	5992595	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=NA12877_ch_T0000390;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000390;transcript_name=NA12877_ch_T0000390;gene_name=TTTY7;ID=exon:NA12877_ch_T0000390:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5992596	5995677	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=NA12877_ch_T0000390;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000390;transcript_name=NA12877_ch_T0000390;gene_name=TTTY7;ID=intron:NA12877_ch_T0000390:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5995678	5995791	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=NA12877_ch_T0000390;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000390;transcript_name=NA12877_ch_T0000390;gene_name=TTTY7;ID=exon:NA12877_ch_T0000390:4;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5995792	5997266	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=NA12877_ch_T0000390;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000390;transcript_name=NA12877_ch_T0000390;gene_name=TTTY7;ID=intron:NA12877_ch_T0000390:4;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5997267	5997512	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=NA12877_ch_T0000390;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000390;transcript_name=NA12877_ch_T0000390;gene_name=TTTY7;ID=exon:NA12877_ch_T0000390:5;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5982951	5997512	1000	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=NA12877_ch_T0000391;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000391;gene_name=TTTY7;ID=NA12877_ch_T0000391;Name=TTTY7
NA12877_chrY	CAT	exon	5982951	5983241	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=NA12877_ch_T0000391;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000391;transcript_name=NA12877_ch_T0000391;gene_name=TTTY7;ID=exon:NA12877_ch_T0000391:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5983242	5990131	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=NA12877_ch_T0000391;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000391;transcript_name=NA12877_ch_T0000391;gene_name=TTTY7;ID=intron:NA12877_ch_T0000391:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990132	5990213	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=NA12877_ch_T0000391;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000391;transcript_name=NA12877_ch_T0000391;gene_name=TTTY7;ID=exon:NA12877_ch_T0000391:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5990214	5992433	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=NA12877_ch_T0000391;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000391;transcript_name=NA12877_ch_T0000391;gene_name=TTTY7;ID=intron:NA12877_ch_T0000391:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5992434	5992595	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=NA12877_ch_T0000391;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000391;transcript_name=NA12877_ch_T0000391;gene_name=TTTY7;ID=exon:NA12877_ch_T0000391:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5992596	5995677	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=NA12877_ch_T0000391;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000391;transcript_name=NA12877_ch_T0000391;gene_name=TTTY7;ID=intron:NA12877_ch_T0000391:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5995678	5995791	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=NA12877_ch_T0000391;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000391;transcript_name=NA12877_ch_T0000391;gene_name=TTTY7;ID=exon:NA12877_ch_T0000391:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5995792	5997266	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=NA12877_ch_T0000391;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000391;transcript_name=NA12877_ch_T0000391;gene_name=TTTY7;ID=intron:NA12877_ch_T0000391:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5997267	5997512	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=NA12877_ch_T0000391;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000391;transcript_name=NA12877_ch_T0000391;gene_name=TTTY7;ID=exon:NA12877_ch_T0000391:4;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5982951	5990302	1000	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=NA12877_ch_T0000392;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000392;gene_name=TTTY7;ID=NA12877_ch_T0000392;Name=TTTY7
NA12877_chrY	CAT	exon	5982951	5983241	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=NA12877_ch_T0000392;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000392;transcript_name=NA12877_ch_T0000392;gene_name=TTTY7;ID=exon:NA12877_ch_T0000392:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5983242	5984365	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=NA12877_ch_T0000392;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000392;transcript_name=NA12877_ch_T0000392;gene_name=TTTY7;ID=intron:NA12877_ch_T0000392:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5984366	5984523	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=NA12877_ch_T0000392;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000392;transcript_name=NA12877_ch_T0000392;gene_name=TTTY7;ID=exon:NA12877_ch_T0000392:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5984524	5986578	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=NA12877_ch_T0000392;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000392;transcript_name=NA12877_ch_T0000392;gene_name=TTTY7;ID=intron:NA12877_ch_T0000392:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5986579	5986712	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=NA12877_ch_T0000392;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000392;transcript_name=NA12877_ch_T0000392;gene_name=TTTY7;ID=exon:NA12877_ch_T0000392:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5986713	5987108	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=NA12877_ch_T0000392;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000392;transcript_name=NA12877_ch_T0000392;gene_name=TTTY7;ID=intron:NA12877_ch_T0000392:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5987109	5987215	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=NA12877_ch_T0000392;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000392;transcript_name=NA12877_ch_T0000392;gene_name=TTTY7;ID=exon:NA12877_ch_T0000392:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5987216	5990131	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=NA12877_ch_T0000392;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000392;transcript_name=NA12877_ch_T0000392;gene_name=TTTY7;ID=intron:NA12877_ch_T0000392:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990132	5990302	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=NA12877_ch_T0000392;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000392;transcript_name=NA12877_ch_T0000392;gene_name=TTTY7;ID=exon:NA12877_ch_T0000392:4;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5982953	5990294	1000	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=NA12877_ch_T0000393;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000393;gene_name=TTTY7;ID=NA12877_ch_T0000393;Name=TTTY7
NA12877_chrY	CAT	exon	5982953	5983241	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=NA12877_ch_T0000393;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000393;transcript_name=NA12877_ch_T0000393;gene_name=TTTY7;ID=exon:NA12877_ch_T0000393:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5983242	5987108	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=NA12877_ch_T0000393;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000393;transcript_name=NA12877_ch_T0000393;gene_name=TTTY7;ID=intron:NA12877_ch_T0000393:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5987109	5987215	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=NA12877_ch_T0000393;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000393;transcript_name=NA12877_ch_T0000393;gene_name=TTTY7;ID=exon:NA12877_ch_T0000393:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5987216	5990131	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=NA12877_ch_T0000393;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000393;transcript_name=NA12877_ch_T0000393;gene_name=TTTY7;ID=intron:NA12877_ch_T0000393:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990132	5990294	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=NA12877_ch_T0000393;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000393;transcript_name=NA12877_ch_T0000393;gene_name=TTTY7;ID=exon:NA12877_ch_T0000393:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5982954	5990300	1000	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=NA12877_ch_T0000394;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000394;gene_name=TTTY7;ID=NA12877_ch_T0000394;Name=TTTY7
NA12877_chrY	CAT	exon	5982954	5983241	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=NA12877_ch_T0000394;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000394;transcript_name=NA12877_ch_T0000394;gene_name=TTTY7;ID=exon:NA12877_ch_T0000394:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5983242	5986578	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=NA12877_ch_T0000394;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000394;transcript_name=NA12877_ch_T0000394;gene_name=TTTY7;ID=intron:NA12877_ch_T0000394:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5986579	5986712	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=NA12877_ch_T0000394;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000394;transcript_name=NA12877_ch_T0000394;gene_name=TTTY7;ID=exon:NA12877_ch_T0000394:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5986713	5990131	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=NA12877_ch_T0000394;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000394;transcript_name=NA12877_ch_T0000394;gene_name=TTTY7;ID=intron:NA12877_ch_T0000394:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990132	5990300	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=NA12877_ch_T0000394;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000394;transcript_name=NA12877_ch_T0000394;gene_name=TTTY7;ID=exon:NA12877_ch_T0000394:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5982954	5990301	1000	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=NA12877_ch_T0000395;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000395;gene_name=TTTY7;ID=NA12877_ch_T0000395;Name=TTTY7
NA12877_chrY	CAT	exon	5982954	5983241	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=NA12877_ch_T0000395;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000395;transcript_name=NA12877_ch_T0000395;gene_name=TTTY7;ID=exon:NA12877_ch_T0000395:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5983242	5986578	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=NA12877_ch_T0000395;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000395;transcript_name=NA12877_ch_T0000395;gene_name=TTTY7;ID=intron:NA12877_ch_T0000395:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5986579	5986712	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=NA12877_ch_T0000395;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000395;transcript_name=NA12877_ch_T0000395;gene_name=TTTY7;ID=exon:NA12877_ch_T0000395:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5986713	5987108	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=NA12877_ch_T0000395;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000395;transcript_name=NA12877_ch_T0000395;gene_name=TTTY7;ID=intron:NA12877_ch_T0000395:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5987109	5987215	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=NA12877_ch_T0000395;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000395;transcript_name=NA12877_ch_T0000395;gene_name=TTTY7;ID=exon:NA12877_ch_T0000395:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5987216	5990131	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=NA12877_ch_T0000395;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000395;transcript_name=NA12877_ch_T0000395;gene_name=TTTY7;ID=intron:NA12877_ch_T0000395:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990132	5990301	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=NA12877_ch_T0000395;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000395;transcript_name=NA12877_ch_T0000395;gene_name=TTTY7;ID=exon:NA12877_ch_T0000395:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5982955	5984609	1000	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=NA12877_ch_T0000396;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000396;gene_name=TTTY7;ID=NA12877_ch_T0000396;Name=TTTY7
NA12877_chrY	CAT	exon	5982955	5983241	.	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=NA12877_ch_T0000396;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000396;transcript_name=NA12877_ch_T0000396;gene_name=TTTY7;ID=exon:NA12877_ch_T0000396:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5983242	5984365	.	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=NA12877_ch_T0000396;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000396;transcript_name=NA12877_ch_T0000396;gene_name=TTTY7;ID=intron:NA12877_ch_T0000396:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5984366	5984609	.	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=NA12877_ch_T0000396;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000396;transcript_name=NA12877_ch_T0000396;gene_name=TTTY7;ID=exon:NA12877_ch_T0000396:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5982976	5997509	1000	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=NA12877_ch_T0000397;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000397;gene_name=TTTY7;ID=NA12877_ch_T0000397;Name=TTTY7
NA12877_chrY	CAT	exon	5982976	5983241	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=NA12877_ch_T0000397;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000397;transcript_name=NA12877_ch_T0000397;gene_name=TTTY7;ID=exon:NA12877_ch_T0000397:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5983242	5990131	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=NA12877_ch_T0000397;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000397;transcript_name=NA12877_ch_T0000397;gene_name=TTTY7;ID=intron:NA12877_ch_T0000397:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990132	5990213	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=NA12877_ch_T0000397;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000397;transcript_name=NA12877_ch_T0000397;gene_name=TTTY7;ID=exon:NA12877_ch_T0000397:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5990214	5992520	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=NA12877_ch_T0000397;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000397;transcript_name=NA12877_ch_T0000397;gene_name=TTTY7;ID=intron:NA12877_ch_T0000397:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5992521	5992595	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=NA12877_ch_T0000397;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000397;transcript_name=NA12877_ch_T0000397;gene_name=TTTY7;ID=exon:NA12877_ch_T0000397:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5992596	5995677	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=NA12877_ch_T0000397;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000397;transcript_name=NA12877_ch_T0000397;gene_name=TTTY7;ID=intron:NA12877_ch_T0000397:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5995678	5995791	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=NA12877_ch_T0000397;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000397;transcript_name=NA12877_ch_T0000397;gene_name=TTTY7;ID=exon:NA12877_ch_T0000397:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5995792	5997266	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=NA12877_ch_T0000397;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000397;transcript_name=NA12877_ch_T0000397;gene_name=TTTY7;ID=intron:NA12877_ch_T0000397:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5997267	5997509	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=NA12877_ch_T0000397;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000397;transcript_name=NA12877_ch_T0000397;gene_name=TTTY7;ID=exon:NA12877_ch_T0000397:4;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5982976	5990297	1000	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=NA12877_ch_T0000398;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000398;gene_name=TTTY7;ID=NA12877_ch_T0000398;Name=TTTY7
NA12877_chrY	CAT	exon	5982976	5983241	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=NA12877_ch_T0000398;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000398;transcript_name=NA12877_ch_T0000398;gene_name=TTTY7;ID=exon:NA12877_ch_T0000398:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5983242	5984365	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=NA12877_ch_T0000398;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000398;transcript_name=NA12877_ch_T0000398;gene_name=TTTY7;ID=intron:NA12877_ch_T0000398:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5984366	5984523	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=NA12877_ch_T0000398;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000398;transcript_name=NA12877_ch_T0000398;gene_name=TTTY7;ID=exon:NA12877_ch_T0000398:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5984524	5986578	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=NA12877_ch_T0000398;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000398;transcript_name=NA12877_ch_T0000398;gene_name=TTTY7;ID=intron:NA12877_ch_T0000398:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5986579	5986712	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=NA12877_ch_T0000398;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000398;transcript_name=NA12877_ch_T0000398;gene_name=TTTY7;ID=exon:NA12877_ch_T0000398:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5986713	5990131	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=NA12877_ch_T0000398;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000398;transcript_name=NA12877_ch_T0000398;gene_name=TTTY7;ID=intron:NA12877_ch_T0000398:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990132	5990297	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=NA12877_ch_T0000398;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000398;transcript_name=NA12877_ch_T0000398;gene_name=TTTY7;ID=exon:NA12877_ch_T0000398:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5985359	5990301	1000	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=NA12877_ch_T0000399;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000399;gene_name=TTTY7;ID=NA12877_ch_T0000399;Name=TTTY7
NA12877_chrY	CAT	exon	5985359	5985658	.	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=NA12877_ch_T0000399;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000399;transcript_name=NA12877_ch_T0000399;gene_name=TTTY7;ID=exon:NA12877_ch_T0000399:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5985659	5990131	.	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=NA12877_ch_T0000399;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000399;transcript_name=NA12877_ch_T0000399;gene_name=TTTY7;ID=intron:NA12877_ch_T0000399:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990132	5990301	.	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=NA12877_ch_T0000399;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000399;transcript_name=NA12877_ch_T0000399;gene_name=TTTY7;ID=exon:NA12877_ch_T0000399:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5989074	5997512	1000	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=NA12877_ch_T0000400;Name=TTTY7
NA12877_chrY	CAT	exon	5989074	5989110	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=exon:NA12877_ch_T0000400:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5989111	5990051	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=intron:NA12877_ch_T0000400:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990052	5990213	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=exon:NA12877_ch_T0000400:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5990214	5992520	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=intron:NA12877_ch_T0000400:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5992521	5992595	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=exon:NA12877_ch_T0000400:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5992596	5993283	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=intron:NA12877_ch_T0000400:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5993284	5993760	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=exon:NA12877_ch_T0000400:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5993761	5995677	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=intron:NA12877_ch_T0000400:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5995678	5995791	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=exon:NA12877_ch_T0000400:4;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5995792	5996764	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=intron:NA12877_ch_T0000400:4;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5996765	5997020	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=exon:NA12877_ch_T0000400:5;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5997021	5997266	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=intron:NA12877_ch_T0000400:5;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5997267	5997512	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=NA12877_ch_T0000400;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000400;transcript_name=NA12877_ch_T0000400;gene_name=TTTY7;ID=exon:NA12877_ch_T0000400:6;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5989074	5997512	1000	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=NA12877_ch_T0000401;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000401;gene_name=TTTY7;ID=NA12877_ch_T0000401;Name=TTTY7
NA12877_chrY	CAT	exon	5989074	5989110	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=NA12877_ch_T0000401;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000401;transcript_name=NA12877_ch_T0000401;gene_name=TTTY7;ID=exon:NA12877_ch_T0000401:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5989111	5990051	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=NA12877_ch_T0000401;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000401;transcript_name=NA12877_ch_T0000401;gene_name=TTTY7;ID=intron:NA12877_ch_T0000401:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5990052	5990213	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=NA12877_ch_T0000401;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000401;transcript_name=NA12877_ch_T0000401;gene_name=TTTY7;ID=exon:NA12877_ch_T0000401:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5990214	5992520	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=NA12877_ch_T0000401;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000401;transcript_name=NA12877_ch_T0000401;gene_name=TTTY7;ID=intron:NA12877_ch_T0000401:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5992521	5992595	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=NA12877_ch_T0000401;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000401;transcript_name=NA12877_ch_T0000401;gene_name=TTTY7;ID=exon:NA12877_ch_T0000401:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5992596	5993283	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=NA12877_ch_T0000401;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000401;transcript_name=NA12877_ch_T0000401;gene_name=TTTY7;ID=intron:NA12877_ch_T0000401:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5993284	5993760	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=NA12877_ch_T0000401;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000401;transcript_name=NA12877_ch_T0000401;gene_name=TTTY7;ID=exon:NA12877_ch_T0000401:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5993761	5995677	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=NA12877_ch_T0000401;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000401;transcript_name=NA12877_ch_T0000401;gene_name=TTTY7;ID=intron:NA12877_ch_T0000401:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5995678	5995791	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=NA12877_ch_T0000401;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000401;transcript_name=NA12877_ch_T0000401;gene_name=TTTY7;ID=exon:NA12877_ch_T0000401:4;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5995792	5997266	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=NA12877_ch_T0000401;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000401;transcript_name=NA12877_ch_T0000401;gene_name=TTTY7;ID=intron:NA12877_ch_T0000401:4;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5997267	5997512	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=NA12877_ch_T0000401;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000401;transcript_name=NA12877_ch_T0000401;gene_name=TTTY7;ID=exon:NA12877_ch_T0000401:5;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5993492	5997512	1000	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=NA12877_ch_T0000402;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000402;gene_name=TTTY7;ID=NA12877_ch_T0000402;Name=TTTY7
NA12877_chrY	CAT	exon	5993492	5993760	.	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=NA12877_ch_T0000402;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000402;transcript_name=NA12877_ch_T0000402;gene_name=TTTY7;ID=exon:NA12877_ch_T0000402:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5993761	5997266	.	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=NA12877_ch_T0000402;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000402;transcript_name=NA12877_ch_T0000402;gene_name=TTTY7;ID=intron:NA12877_ch_T0000402:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5997267	5997512	.	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=NA12877_ch_T0000402;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000402;transcript_name=NA12877_ch_T0000402;gene_name=TTTY7;ID=exon:NA12877_ch_T0000402:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5993511	5997512	1000	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=NA12877_ch_T0000403;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000403;gene_name=TTTY7;ID=NA12877_ch_T0000403;Name=TTTY7
NA12877_chrY	CAT	exon	5993511	5993760	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=NA12877_ch_T0000403;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000403;transcript_name=NA12877_ch_T0000403;gene_name=TTTY7;ID=exon:NA12877_ch_T0000403:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5993761	5995578	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=NA12877_ch_T0000403;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000403;transcript_name=NA12877_ch_T0000403;gene_name=TTTY7;ID=intron:NA12877_ch_T0000403:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5995579	5995791	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=NA12877_ch_T0000403;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000403;transcript_name=NA12877_ch_T0000403;gene_name=TTTY7;ID=exon:NA12877_ch_T0000403:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5995792	5997266	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=NA12877_ch_T0000403;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000403;transcript_name=NA12877_ch_T0000403;gene_name=TTTY7;ID=intron:NA12877_ch_T0000403:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5997267	5997512	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=NA12877_ch_T0000403;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000403;transcript_name=NA12877_ch_T0000403;gene_name=TTTY7;ID=exon:NA12877_ch_T0000403:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5994674	5997512	1000	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=NA12877_ch_T0000404;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000404;gene_name=TTTY7;ID=NA12877_ch_T0000404;Name=TTTY7
NA12877_chrY	CAT	exon	5994674	5995037	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=NA12877_ch_T0000404;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000404;transcript_name=NA12877_ch_T0000404;gene_name=TTTY7;ID=exon:NA12877_ch_T0000404:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5995038	5995677	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=NA12877_ch_T0000404;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000404;transcript_name=NA12877_ch_T0000404;gene_name=TTTY7;ID=intron:NA12877_ch_T0000404:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5995678	5995791	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=NA12877_ch_T0000404;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000404;transcript_name=NA12877_ch_T0000404;gene_name=TTTY7;ID=exon:NA12877_ch_T0000404:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5995792	5996764	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=NA12877_ch_T0000404;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000404;transcript_name=NA12877_ch_T0000404;gene_name=TTTY7;ID=intron:NA12877_ch_T0000404:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5996765	5997020	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=NA12877_ch_T0000404;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000404;transcript_name=NA12877_ch_T0000404;gene_name=TTTY7;ID=exon:NA12877_ch_T0000404:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5997021	5997266	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=NA12877_ch_T0000404;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000404;transcript_name=NA12877_ch_T0000404;gene_name=TTTY7;ID=intron:NA12877_ch_T0000404:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5997267	5997512	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=NA12877_ch_T0000404;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000404;transcript_name=NA12877_ch_T0000404;gene_name=TTTY7;ID=exon:NA12877_ch_T0000404:3;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	5994674	5997502	1000	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=NA12877_ch_T0000405;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_G0000098;transcript_name=NA12877_ch_T0000405;gene_name=TTTY7;ID=NA12877_ch_T0000405;Name=TTTY7
NA12877_chrY	CAT	exon	5994674	5995037	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=NA12877_ch_T0000405;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000405;transcript_name=NA12877_ch_T0000405;gene_name=TTTY7;ID=exon:NA12877_ch_T0000405:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5995038	5995677	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=NA12877_ch_T0000405;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000405;transcript_name=NA12877_ch_T0000405;gene_name=TTTY7;ID=intron:NA12877_ch_T0000405:0;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5995678	5995791	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=NA12877_ch_T0000405;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000405;transcript_name=NA12877_ch_T0000405;gene_name=TTTY7;ID=exon:NA12877_ch_T0000405:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	5995792	5997266	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=NA12877_ch_T0000405;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000405;transcript_name=NA12877_ch_T0000405;gene_name=TTTY7;ID=intron:NA12877_ch_T0000405:1;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	5997267	5997502	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=NA12877_ch_T0000405;gene_id=NA12877_ch_G0000098;Parent=NA12877_ch_T0000405;transcript_name=NA12877_ch_T0000405;gene_name=TTTY7;ID=exon:NA12877_ch_T0000405:2;Name=TTTY7;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6001994	6013297	.	-	.	source_gene_common_name=TTTY8B;source_gene=ENSG00000185700.11;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;gene_id=NA12877_ch_G0000099;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=NA12877_ch_G0000099;Name=TTTY8B
NA12877_chrY	CAT	transcript	6001994	6013283	1000	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=NA12877_ch_T0000406;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_G0000099;transcript_name=NA12877_ch_T0000406;gene_name=TTTY8B;ID=NA12877_ch_T0000406;Name=TTTY8B
NA12877_chrY	CAT	exon	6001994	6002891	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=NA12877_ch_T0000406;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000406;transcript_name=NA12877_ch_T0000406;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000406:0;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6002892	6012418	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=NA12877_ch_T0000406;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000406;transcript_name=NA12877_ch_T0000406;gene_name=TTTY8B;ID=intron:NA12877_ch_T0000406:0;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6012419	6012623	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=NA12877_ch_T0000406;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000406;transcript_name=NA12877_ch_T0000406;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000406:1;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6012624	6013100	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=NA12877_ch_T0000406;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000406;transcript_name=NA12877_ch_T0000406;gene_name=TTTY8B;ID=intron:NA12877_ch_T0000406:1;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6013101	6013283	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=NA12877_ch_T0000406;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000406;transcript_name=NA12877_ch_T0000406;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000406:2;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6002671	6013297	1000	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=NA12877_ch_T0000407;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_G0000099;transcript_name=NA12877_ch_T0000407;gene_name=TTTY8B;ID=NA12877_ch_T0000407;Name=TTTY8B
NA12877_chrY	CAT	exon	6002671	6002891	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=NA12877_ch_T0000407;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000407;transcript_name=NA12877_ch_T0000407;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000407:0;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6002892	6012418	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=NA12877_ch_T0000407;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000407;transcript_name=NA12877_ch_T0000407;gene_name=TTTY8B;ID=intron:NA12877_ch_T0000407:0;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6012419	6012623	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=NA12877_ch_T0000407;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000407;transcript_name=NA12877_ch_T0000407;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000407:1;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6012624	6013257	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=NA12877_ch_T0000407;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000407;transcript_name=NA12877_ch_T0000407;gene_name=TTTY8B;ID=intron:NA12877_ch_T0000407:1;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6013258	6013297	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=NA12877_ch_T0000407;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000407;transcript_name=NA12877_ch_T0000407;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000407:2;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6010379	6013267	1000	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=NA12877_ch_T0000408;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_G0000099;transcript_name=NA12877_ch_T0000408;gene_name=TTTY8B;ID=NA12877_ch_T0000408;Name=TTTY8B
NA12877_chrY	CAT	exon	6010379	6010555	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=NA12877_ch_T0000408;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000408;transcript_name=NA12877_ch_T0000408;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000408:0;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6010556	6012418	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=NA12877_ch_T0000408;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000408;transcript_name=NA12877_ch_T0000408;gene_name=TTTY8B;ID=intron:NA12877_ch_T0000408:0;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6012419	6012623	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=NA12877_ch_T0000408;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000408;transcript_name=NA12877_ch_T0000408;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000408:1;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6012624	6013100	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=NA12877_ch_T0000408;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000408;transcript_name=NA12877_ch_T0000408;gene_name=TTTY8B;ID=intron:NA12877_ch_T0000408:1;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6013101	6013267	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=NA12877_ch_T0000408;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000408;transcript_name=NA12877_ch_T0000408;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000408:2;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6010637	6013261	1000	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=NA12877_ch_T0000409;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_G0000099;transcript_name=NA12877_ch_T0000409;gene_name=TTTY8B;ID=NA12877_ch_T0000409;Name=TTTY8B
NA12877_chrY	CAT	exon	6010637	6010826	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=NA12877_ch_T0000409;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000409;transcript_name=NA12877_ch_T0000409;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000409:0;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6010827	6012418	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=NA12877_ch_T0000409;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000409;transcript_name=NA12877_ch_T0000409;gene_name=TTTY8B;ID=intron:NA12877_ch_T0000409:0;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6012419	6012623	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=NA12877_ch_T0000409;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000409;transcript_name=NA12877_ch_T0000409;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000409:1;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6012624	6013100	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=NA12877_ch_T0000409;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000409;transcript_name=NA12877_ch_T0000409;gene_name=TTTY8B;ID=intron:NA12877_ch_T0000409:1;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6013101	6013261	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=NA12877_ch_T0000409;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000409;transcript_name=NA12877_ch_T0000409;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000409:2;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6010637	6013297	1000	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=NA12877_ch_T0000410;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_G0000099;transcript_name=NA12877_ch_T0000410;gene_name=TTTY8B;ID=NA12877_ch_T0000410;Name=TTTY8B
NA12877_chrY	CAT	exon	6010637	6010826	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=NA12877_ch_T0000410;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000410;transcript_name=NA12877_ch_T0000410;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000410:0;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6010827	6012418	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=NA12877_ch_T0000410;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000410;transcript_name=NA12877_ch_T0000410;gene_name=TTTY8B;ID=intron:NA12877_ch_T0000410:0;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6012419	6012623	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=NA12877_ch_T0000410;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000410;transcript_name=NA12877_ch_T0000410;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000410:1;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6012624	6013257	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=NA12877_ch_T0000410;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000410;transcript_name=NA12877_ch_T0000410;gene_name=TTTY8B;ID=intron:NA12877_ch_T0000410:1;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6013258	6013297	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=NA12877_ch_T0000410;gene_id=NA12877_ch_G0000099;Parent=NA12877_ch_T0000410;transcript_name=NA12877_ch_T0000410;gene_name=TTTY8B;ID=exon:NA12877_ch_T0000410:2;Name=TTTY8B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6032601	6036382	.	-	.	source_gene_common_name=ENSG00000235895;source_gene=ENSG00000235895.1;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;gene_id=NA12877_ch_G0000100;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000235895;gene_sources=liftoff;ID=NA12877_ch_G0000100;Name=ENSG00000235895
NA12877_chrY	CAT	transcript	6032601	6036382	1000	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=NA12877_ch_T0000411;gene_id=NA12877_ch_G0000100;Parent=NA12877_ch_G0000100;transcript_name=NA12877_ch_T0000411;gene_name=ENSG00000235895;ID=NA12877_ch_T0000411;Name=ENSG00000235895
NA12877_chrY	CAT	exon	6032601	6032696	.	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=NA12877_ch_T0000411;gene_id=NA12877_ch_G0000100;Parent=NA12877_ch_T0000411;transcript_name=NA12877_ch_T0000411;gene_name=ENSG00000235895;ID=exon:NA12877_ch_T0000411:0;Name=ENSG00000235895;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6032697	6036209	.	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=NA12877_ch_T0000411;gene_id=NA12877_ch_G0000100;Parent=NA12877_ch_T0000411;transcript_name=NA12877_ch_T0000411;gene_name=ENSG00000235895;ID=intron:NA12877_ch_T0000411:0;Name=ENSG00000235895;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6036210	6036382	.	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=NA12877_ch_T0000411;gene_id=NA12877_ch_G0000100;Parent=NA12877_ch_T0000411;transcript_name=NA12877_ch_T0000411;gene_name=ENSG00000235895;ID=exon:NA12877_ch_T0000411:1;Name=ENSG00000235895;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6060088	6060555	.	+	.	source_gene_common_name=TSPY17P;source_gene=ENSG00000232620.1;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;gene_id=NA12877_ch_G0000101;gene_biotype=unprocessed_pseudogene;gene_name=TSPY17P;gene_sources=liftoff;ID=NA12877_ch_G0000101;Name=TSPY17P
NA12877_chrY	CAT	transcript	6060088	6060555	1000	+	.	source_transcript=ENST00000450329.1;source_transcript_name=TSPY17P-201;source_gene=ENSG00000232620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450329.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY17P;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;transcript_id=NA12877_ch_T0000412;gene_id=NA12877_ch_G0000101;Parent=NA12877_ch_G0000101;transcript_name=NA12877_ch_T0000412;gene_name=TSPY17P;ID=NA12877_ch_T0000412;Name=TSPY17P
NA12877_chrY	CAT	exon	6060088	6060555	.	+	.	source_transcript=ENST00000450329.1;source_transcript_name=TSPY17P-201;source_gene=ENSG00000232620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450329.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY17P;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;transcript_id=NA12877_ch_T0000412;gene_id=NA12877_ch_G0000101;Parent=NA12877_ch_T0000412;transcript_name=NA12877_ch_T0000412;gene_name=TSPY17P;ID=exon:NA12877_ch_T0000412:0;Name=TSPY17P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6258588	6258806	.	-	.	source_gene_common_name=SRIP3;source_gene=ENSG00000224953.1;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;gene_id=NA12877_ch_G0000102;gene_biotype=processed_pseudogene;gene_name=SRIP3;gene_sources=liftoff;ID=NA12877_ch_G0000102;Name=SRIP3
NA12877_chrY	CAT	transcript	6258588	6258806	1000	-	.	source_transcript=ENST00000413200.1;source_transcript_name=SRIP3-201;source_gene=ENSG00000224953.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224953.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413200.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRIP3;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;transcript_id=NA12877_ch_T0000413;gene_id=NA12877_ch_G0000102;Parent=NA12877_ch_G0000102;transcript_name=NA12877_ch_T0000413;gene_name=SRIP3;ID=NA12877_ch_T0000413;Name=SRIP3
NA12877_chrY	CAT	exon	6258588	6258806	.	-	.	source_transcript=ENST00000413200.1;source_transcript_name=SRIP3-201;source_gene=ENSG00000224953.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224953.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRIP3;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;transcript_id=NA12877_ch_T0000413;gene_id=NA12877_ch_G0000102;Parent=NA12877_ch_T0000413;transcript_name=NA12877_ch_T0000413;gene_name=SRIP3;ID=exon:NA12877_ch_T0000413:0;Name=SRIP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6328780	6328971	.	+	.	source_gene_common_name=ENSG00000274365;source_gene=ENSG00000274365.1;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;gene_id=NA12877_ch_G0000103;gene_biotype=processed_pseudogene;gene_name=ENSG00000274365;gene_sources=liftoff;ID=NA12877_ch_G0000103;Name=ENSG00000274365
NA12877_chrY	CAT	transcript	6328780	6328971	1000	+	.	source_transcript=ENST00000610687.1;source_transcript_name=ENST00000610687;source_gene=ENSG00000274365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610687.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274365;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;transcript_id=NA12877_ch_T0000414;gene_id=NA12877_ch_G0000103;Parent=NA12877_ch_G0000103;transcript_name=NA12877_ch_T0000414;gene_name=ENSG00000274365;ID=NA12877_ch_T0000414;Name=ENSG00000274365
NA12877_chrY	CAT	exon	6328780	6328971	.	+	.	source_transcript=ENST00000610687.1;source_transcript_name=ENST00000610687;source_gene=ENSG00000274365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274365;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;transcript_id=NA12877_ch_T0000414;gene_id=NA12877_ch_G0000103;Parent=NA12877_ch_T0000414;transcript_name=NA12877_ch_T0000414;gene_name=ENSG00000274365;ID=exon:NA12877_ch_T0000414:0;Name=ENSG00000274365;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6377337	6377882	.	+	.	source_gene_common_name=GOT2P5;source_gene=ENSG00000233634.1;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;gene_id=NA12877_ch_G0000104;gene_biotype=processed_pseudogene;gene_name=GOT2P5;gene_sources=liftoff;ID=NA12877_ch_G0000104;Name=GOT2P5
NA12877_chrY	CAT	transcript	6377337	6377882	1000	+	.	source_transcript=ENST00000433995.1;source_transcript_name=GOT2P5-201;source_gene=ENSG00000233634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000433995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433995.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOT2P5;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;transcript_id=NA12877_ch_T0000415;gene_id=NA12877_ch_G0000104;Parent=NA12877_ch_G0000104;transcript_name=NA12877_ch_T0000415;gene_name=GOT2P5;ID=NA12877_ch_T0000415;Name=GOT2P5
NA12877_chrY	CAT	exon	6377337	6377882	.	+	.	source_transcript=ENST00000433995.1;source_transcript_name=GOT2P5-201;source_gene=ENSG00000233634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000433995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433995.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOT2P5;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;transcript_id=NA12877_ch_T0000415;gene_id=NA12877_ch_G0000104;Parent=NA12877_ch_T0000415;transcript_name=NA12877_ch_T0000415;gene_name=GOT2P5;ID=exon:NA12877_ch_T0000415:0;Name=GOT2P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6405548	6451382	.	-	.	source_gene_common_name=AMELY;source_gene=ENSG00000099721.16;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;gene_id=NA12877_ch_G0000105;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff;ID=NA12877_ch_G0000105;Name=AMELY
NA12877_chrY	CAT	transcript	6405548	6451382	100	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_G0000105;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=NA12877_ch_T0000416;Name=AMELY
NA12877_chrY	CAT	exon	6405548	6405708	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=exon:NA12877_ch_T0000416:0;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6405703	6405708	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=CDS:NA12877_ch_T0000416:0;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	6405703	6405705	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=stop_codon:NA12877_ch_T0000416;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6405709	6407666	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=intron:NA12877_ch_T0000416:0;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6407667	6408092	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=exon:NA12877_ch_T0000416:1;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6407667	6408092	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=CDS:NA12877_ch_T0000416:1;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6408093	6408361	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=intron:NA12877_ch_T0000416:1;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6408362	6408406	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=exon:NA12877_ch_T0000416:2;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6408362	6408406	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=CDS:NA12877_ch_T0000416:2;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6408407	6409635	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=intron:NA12877_ch_T0000416:2;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6409636	6409683	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=exon:NA12877_ch_T0000416:3;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6409636	6409683	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=CDS:NA12877_ch_T0000416:3;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6409684	6412184	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=intron:NA12877_ch_T0000416:3;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6412185	6412250	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=exon:NA12877_ch_T0000416:4;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6412185	6412238	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=CDS:NA12877_ch_T0000416:4;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	6412236	6412238	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=start_codon:NA12877_ch_T0000416;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6412251	6413601	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=intron:NA12877_ch_T0000416:4;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6413602	6413701	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=exon:NA12877_ch_T0000416:5;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6413702	6451302	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=intron:NA12877_ch_T0000416:5;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6451303	6451382	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=NA12877_ch_T0000416;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000416;transcript_name=NA12877_ch_T0000416;gene_name=AMELY;ID=exon:NA12877_ch_T0000416:6;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6405703	6412238	100	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_G0000105;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=NA12877_ch_T0000417;Name=AMELY
NA12877_chrY	CAT	exon	6405703	6405708	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=exon:NA12877_ch_T0000417:0;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6405703	6405708	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=CDS:NA12877_ch_T0000417:0;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	6405703	6405705	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=stop_codon:NA12877_ch_T0000417;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6405709	6407666	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=intron:NA12877_ch_T0000417:0;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6407667	6408092	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=exon:NA12877_ch_T0000417:1;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6407667	6408092	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=CDS:NA12877_ch_T0000417:1;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6408093	6408361	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=intron:NA12877_ch_T0000417:1;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6408362	6408406	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=exon:NA12877_ch_T0000417:2;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6408362	6408406	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=CDS:NA12877_ch_T0000417:2;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6408407	6408497	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=intron:NA12877_ch_T0000417:2;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6408498	6408539	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=exon:NA12877_ch_T0000417:3;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6408498	6408539	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=CDS:NA12877_ch_T0000417:3;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6408540	6409635	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=intron:NA12877_ch_T0000417:3;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6409636	6409683	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=exon:NA12877_ch_T0000417:4;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6409636	6409683	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=CDS:NA12877_ch_T0000417:4;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6409684	6412184	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=intron:NA12877_ch_T0000417:4;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6412185	6412238	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=exon:NA12877_ch_T0000417:5;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6412185	6412238	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=CDS:NA12877_ch_T0000417:5;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	6412236	6412238	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=NA12877_ch_T0000417;gene_id=NA12877_ch_G0000105;Parent=NA12877_ch_T0000417;transcript_name=NA12877_ch_T0000417;gene_name=AMELY;ID=start_codon:NA12877_ch_T0000417;Name=AMELY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6440383	6441002	.	+	.	source_gene_common_name=ATP5PFP1;source_gene=ENSG00000237701.1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;gene_id=NA12877_ch_G0000106;gene_biotype=processed_pseudogene;gene_name=ATP5PFP1;gene_sources=liftoff;ID=NA12877_ch_G0000106;Name=ATP5PFP1
NA12877_chrY	CAT	transcript	6440383	6441002	1000	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;transcript_id=NA12877_ch_T0000418;gene_id=NA12877_ch_G0000106;Parent=NA12877_ch_G0000106;transcript_name=NA12877_ch_T0000418;gene_name=ATP5PFP1;ID=NA12877_ch_T0000418;Name=ATP5PFP1
NA12877_chrY	CAT	exon	6440383	6440478	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;transcript_id=NA12877_ch_T0000418;gene_id=NA12877_ch_G0000106;Parent=NA12877_ch_T0000418;transcript_name=NA12877_ch_T0000418;gene_name=ATP5PFP1;ID=exon:NA12877_ch_T0000418:0;Name=ATP5PFP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6440479	6440776	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;transcript_id=NA12877_ch_T0000418;gene_id=NA12877_ch_G0000106;Parent=NA12877_ch_T0000418;transcript_name=NA12877_ch_T0000418;gene_name=ATP5PFP1;ID=intron:NA12877_ch_T0000418:0;Name=ATP5PFP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6440777	6441002	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;transcript_id=NA12877_ch_T0000418;gene_id=NA12877_ch_G0000106;Parent=NA12877_ch_T0000418;transcript_name=NA12877_ch_T0000418;gene_name=ATP5PFP1;ID=exon:NA12877_ch_T0000418:1;Name=ATP5PFP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6450316	6641608	.	+	.	source_gene_common_name=TBL1Y;source_gene=ENSG00000092377.15;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;gene_id=NA12877_ch_G0000107;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff;ID=NA12877_ch_G0000107;Name=TBL1Y
NA12877_chrY	CAT	transcript	6450316	6631321	100	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_G0000107;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=NA12877_ch_T0000419;Name=TBL1Y
NA12877_chrY	CAT	exon	6450316	6450612	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:0;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6450613	6451717	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:0;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6451718	6451802	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:1;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6451803	6517842	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:1;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6517843	6517873	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:2;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6517874	6561083	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:2;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6561084	6561172	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:3;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6561173	6564669	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:3;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6564670	6564777	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:4;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6564720	6564777	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:0;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	6564720	6564722	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=start_codon:NA12877_ch_T0000419;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6564778	6582613	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:4;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6582614	6582759	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:5;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6582614	6582759	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:1;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6582760	6603534	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:5;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6603535	6603787	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:6;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6603535	6603787	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:2;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6603788	6609833	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:6;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6609834	6609966	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:7;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6609834	6609966	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:3;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6609967	6610357	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:7;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6610358	6610499	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:8;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6610358	6610499	.	+	1	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:4;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6610500	6611197	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:8;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6611198	6611261	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:9;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6611198	6611261	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:5;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6611262	6611370	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:9;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6611371	6611468	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:10;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6611371	6611468	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:6;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6611469	6614197	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:10;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6614198	6614258	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:11;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6614198	6614258	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:7;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6614259	6620369	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:11;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6620370	6620491	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:12;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6620370	6620491	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:8;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6620492	6625535	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:12;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6625536	6625610	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:13;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6625536	6625610	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:9;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6625611	6625927	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:13;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6625928	6626055	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:14;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6625928	6626055	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:10;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6626056	6626904	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:14;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6626905	6627070	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:15;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6626905	6627070	.	+	1	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:11;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6627071	6629726	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:15;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6629727	6629828	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:16;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6629727	6629828	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:12;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6629829	6631109	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000419:16;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6631110	6631321	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000419:17;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6631110	6631130	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000419:13;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	6631128	6631130	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=NA12877_ch_T0000419;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000419;transcript_name=NA12877_ch_T0000419;gene_name=TBL1Y;ID=stop_codon:NA12877_ch_T0000419;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6450316	6631321	100	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_G0000107;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=NA12877_ch_T0000420;Name=TBL1Y
NA12877_chrY	CAT	exon	6450316	6450612	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:0;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6450613	6451717	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:0;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6451718	6451802	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:1;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6451803	6535438	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:1;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6535439	6535533	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:2;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6535534	6561083	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:2;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6561084	6561172	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:3;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6561173	6564669	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:3;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6564670	6564777	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:4;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6564720	6564777	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:0;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	6564720	6564722	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=start_codon:NA12877_ch_T0000420;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6564778	6582613	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:4;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6582614	6582759	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:5;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6582614	6582759	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:1;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6582760	6603534	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:5;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6603535	6603787	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:6;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6603535	6603787	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:2;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6603788	6609833	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:6;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6609834	6609966	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:7;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6609834	6609966	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:3;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6609967	6610357	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:7;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6610358	6610499	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:8;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6610358	6610499	.	+	1	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:4;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6610500	6611197	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:8;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6611198	6611261	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:9;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6611198	6611261	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:5;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6611262	6611370	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:9;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6611371	6611468	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:10;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6611371	6611468	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:6;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6611469	6614197	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:10;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6614198	6614258	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:11;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6614198	6614258	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:7;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6614259	6620369	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:11;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6620370	6620491	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:12;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6620370	6620491	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:8;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6620492	6625535	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:12;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6625536	6625610	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:13;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6625536	6625610	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:9;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6625611	6625927	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:13;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6625928	6626055	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:14;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6625928	6626055	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:10;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6626056	6626904	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:14;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6626905	6627070	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:15;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6626905	6627070	.	+	1	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:11;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6627071	6629726	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:15;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6629727	6629828	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:16;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6629727	6629828	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:12;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6629829	6631109	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000420:16;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6631110	6631321	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000420:17;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6631110	6631130	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000420:13;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	6631128	6631130	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=NA12877_ch_T0000420;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000420;transcript_name=NA12877_ch_T0000420;gene_name=TBL1Y;ID=stop_codon:NA12877_ch_T0000420;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6450327	6631321	100	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_G0000107;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=NA12877_ch_T0000421;Name=TBL1Y
NA12877_chrY	CAT	exon	6450327	6450612	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:0;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6450613	6451717	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:0;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6451718	6451802	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:1;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6451803	6517842	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:1;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6517843	6517873	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:2;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6517874	6535438	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:2;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6535439	6535533	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:3;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6535534	6561083	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:3;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6561084	6561172	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:4;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6561173	6564669	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:4;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6564670	6564777	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:5;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6564720	6564777	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:0;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	6564720	6564722	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=start_codon:NA12877_ch_T0000421;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6564778	6582613	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:5;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6582614	6582759	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:6;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6582614	6582759	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:1;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6582760	6603534	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:6;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6603535	6603787	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:7;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6603535	6603787	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:2;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6603788	6609833	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:7;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6609834	6609966	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:8;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6609834	6609966	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:3;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6609967	6610357	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:8;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6610358	6610499	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:9;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6610358	6610499	.	+	1	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:4;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6610500	6611197	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:9;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6611198	6611261	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:10;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6611198	6611261	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:5;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6611262	6611370	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:10;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6611371	6611468	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:11;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6611371	6611468	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:6;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6611469	6614197	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:11;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6614198	6614258	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:12;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6614198	6614258	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:7;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6614259	6620369	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:12;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6620370	6620491	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:13;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6620370	6620491	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:8;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6620492	6625535	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:13;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6625536	6625610	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:14;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6625536	6625610	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:9;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6625611	6625927	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:14;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6625928	6626055	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:15;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6625928	6626055	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:10;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6626056	6626904	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:15;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6626905	6627070	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:16;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6626905	6627070	.	+	1	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:11;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6627071	6629726	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:16;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6629727	6629828	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:17;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6629727	6629828	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:12;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6629829	6631109	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000421:17;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6631110	6631321	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000421:18;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6631110	6631130	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000421:13;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	6631128	6631130	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=NA12877_ch_T0000421;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000421;transcript_name=NA12877_ch_T0000421;gene_name=TBL1Y;ID=stop_codon:NA12877_ch_T0000421;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6626019	6641608	100	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_G0000107;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=NA12877_ch_T0000423;Name=TBL1Y
NA12877_chrY	CAT	exon	6626019	6626055	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000423:0;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6626019	6626055	.	+	2	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000423:0;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6626056	6626904	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000423:0;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6626905	6627070	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000423:1;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6626905	6627070	.	+	1	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000423:1;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6627071	6629726	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000423:1;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6629727	6629828	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000423:2;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6629727	6629828	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000423:2;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6629829	6640422	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000423:2;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6640423	6640488	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000423:3;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6640423	6640488	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000423:3;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6640489	6641456	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=intron:NA12877_ch_T0000423:3;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6641457	6641608	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=exon:NA12877_ch_T0000423:4;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	6641457	6641504	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=CDS:NA12877_ch_T0000423:4;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	6641502	6641504	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=NA12877_ch_T0000423;gene_id=NA12877_ch_G0000107;Parent=NA12877_ch_T0000423;transcript_name=NA12877_ch_T0000423;gene_name=TBL1Y;ID=stop_codon:NA12877_ch_T0000423;Name=TBL1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6458312	6460421	.	+	.	source_gene_common_name=ENSG00000273906;source_gene=ENSG00000273906.1;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;gene_id=NA12877_ch_G0000108;gene_biotype=lncRNA;gene_name=ENSG00000273906;gene_sources=liftoff;ID=NA12877_ch_G0000108;Name=ENSG00000273906
NA12877_chrY	CAT	transcript	6458312	6460421	1000	+	.	source_transcript=ENST00000620503.1;source_transcript_name=ENST00000620503;source_gene=ENSG00000273906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000273906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000620503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620503.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273906;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;transcript_id=NA12877_ch_T0000422;gene_id=NA12877_ch_G0000108;Parent=NA12877_ch_G0000108;transcript_name=NA12877_ch_T0000422;gene_name=ENSG00000273906;ID=NA12877_ch_T0000422;Name=ENSG00000273906
NA12877_chrY	CAT	exon	6458312	6460421	.	+	.	source_transcript=ENST00000620503.1;source_transcript_name=ENST00000620503;source_gene=ENSG00000273906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000273906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000620503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620503.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273906;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;transcript_id=NA12877_ch_T0000422;gene_id=NA12877_ch_G0000108;Parent=NA12877_ch_T0000422;transcript_name=NA12877_ch_T0000422;gene_name=ENSG00000273906;ID=exon:NA12877_ch_T0000422:0;Name=ENSG00000273906;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6639707	6717444	.	-	.	source_gene_common_name=ENSG00000309393;source_gene=ENSG00000309393.1;gene_id=NA12877_ch_G0000109;gene_biotype=lncRNA;gene_name=ENSG00000309393;gene_sources=liftoff;ID=NA12877_ch_G0000109;Name=ENSG00000309393
NA12877_chrY	CAT	transcript	6639707	6717454	1000	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=NA12877_ch_T0000424;gene_id=NA12877_ch_G0000109;Parent=NA12877_ch_G0000109;transcript_name=NA12877_ch_T0000424;gene_name=ENSG00000309393;ID=NA12877_ch_T0000424;Name=ENSG00000309393
NA12877_chrY	CAT	exon	6639707	6640465	.	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=NA12877_ch_T0000424;gene_id=NA12877_ch_G0000109;Parent=NA12877_ch_T0000424;transcript_name=NA12877_ch_T0000424;gene_name=ENSG00000309393;ID=exon:NA12877_ch_T0000424:0;Name=ENSG00000309393;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6640466	6717301	.	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=NA12877_ch_T0000424;gene_id=NA12877_ch_G0000109;Parent=NA12877_ch_T0000424;transcript_name=NA12877_ch_T0000424;gene_name=ENSG00000309393;ID=intron:NA12877_ch_T0000424:0;Name=ENSG00000309393;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6717302	6717454	.	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=NA12877_ch_T0000424;gene_id=NA12877_ch_G0000109;Parent=NA12877_ch_T0000424;transcript_name=NA12877_ch_T0000424;gene_name=ENSG00000309393;ID=exon:NA12877_ch_T0000424:1;Name=ENSG00000309393;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6640034	6717444	1000	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=NA12877_ch_T0000425;gene_id=NA12877_ch_G0000109;Parent=NA12877_ch_G0000109;transcript_name=NA12877_ch_T0000425;gene_name=ENSG00000309393;ID=NA12877_ch_T0000425;Name=ENSG00000309393
NA12877_chrY	CAT	exon	6640034	6640465	.	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=NA12877_ch_T0000425;gene_id=NA12877_ch_G0000109;Parent=NA12877_ch_T0000425;transcript_name=NA12877_ch_T0000425;gene_name=ENSG00000309393;ID=exon:NA12877_ch_T0000425:0;Name=ENSG00000309393;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6640466	6717341	.	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=NA12877_ch_T0000425;gene_id=NA12877_ch_G0000109;Parent=NA12877_ch_T0000425;transcript_name=NA12877_ch_T0000425;gene_name=ENSG00000309393;ID=intron:NA12877_ch_T0000425:0;Name=ENSG00000309393;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6717342	6717444	.	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=NA12877_ch_T0000425;gene_id=NA12877_ch_G0000109;Parent=NA12877_ch_T0000425;transcript_name=NA12877_ch_T0000425;gene_name=ENSG00000309393;ID=exon:NA12877_ch_T0000425:1;Name=ENSG00000309393;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6640035	6646359	1000	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=NA12877_ch_T0000426;gene_id=NA12877_ch_G0000109;Parent=NA12877_ch_G0000109;transcript_name=NA12877_ch_T0000426;gene_name=ENSG00000309393;ID=NA12877_ch_T0000426;Name=ENSG00000309393
NA12877_chrY	CAT	exon	6640035	6640465	.	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=NA12877_ch_T0000426;gene_id=NA12877_ch_G0000109;Parent=NA12877_ch_T0000426;transcript_name=NA12877_ch_T0000426;gene_name=ENSG00000309393;ID=exon:NA12877_ch_T0000426:0;Name=ENSG00000309393;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6640466	6646194	.	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=NA12877_ch_T0000426;gene_id=NA12877_ch_G0000109;Parent=NA12877_ch_T0000426;transcript_name=NA12877_ch_T0000426;gene_name=ENSG00000309393;ID=intron:NA12877_ch_T0000426:0;Name=ENSG00000309393;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6646195	6646359	.	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=NA12877_ch_T0000426;gene_id=NA12877_ch_G0000109;Parent=NA12877_ch_T0000426;transcript_name=NA12877_ch_T0000426;gene_name=ENSG00000309393;ID=exon:NA12877_ch_T0000426:1;Name=ENSG00000309393;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6640371	6646140	.	-	.	source_gene_common_name=GPR143YP;source_gene=ENSG00000232583.1;gene_id=NA12877_ch_G0000110;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GPR143YP;gene_sources=liftoff;ID=NA12877_ch_G0000110;Name=GPR143YP
NA12877_chrY	CAT	transcript	6640371	6646140	1000	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=NA12877_ch_T0000427;gene_id=NA12877_ch_G0000110;Parent=NA12877_ch_G0000110;transcript_name=NA12877_ch_T0000427;gene_name=GPR143YP;ID=NA12877_ch_T0000427;Name=GPR143YP
NA12877_chrY	CAT	exon	6640371	6640465	.	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=NA12877_ch_T0000427;gene_id=NA12877_ch_G0000110;Parent=NA12877_ch_T0000427;transcript_name=NA12877_ch_T0000427;gene_name=GPR143YP;ID=exon:NA12877_ch_T0000427:0;Name=GPR143YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6640466	6646030	.	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=NA12877_ch_T0000427;gene_id=NA12877_ch_G0000110;Parent=NA12877_ch_T0000427;transcript_name=NA12877_ch_T0000427;gene_name=GPR143YP;ID=intron:NA12877_ch_T0000427:0;Name=GPR143YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6646031	6646140	.	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=NA12877_ch_T0000427;gene_id=NA12877_ch_G0000110;Parent=NA12877_ch_T0000427;transcript_name=NA12877_ch_T0000427;gene_name=GPR143YP;ID=exon:NA12877_ch_T0000427:1;Name=GPR143YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6813615	6921192	.	+	.	source_gene_common_name=PRKY;source_gene=ENSG00000293442.2;gene_id=NA12877_ch_G0000111;gene_biotype=lncRNA;gene_name=PRKY;gene_sources=liftoff;ID=NA12877_ch_G0000111;Name=PRKY
NA12877_chrY	CAT	transcript	6813615	6921192	1000	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_G0000111;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=NA12877_ch_T0000428;Name=PRKY
NA12877_chrY	CAT	exon	6813615	6814121	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=exon:NA12877_ch_T0000428:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6814122	6843579	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=intron:NA12877_ch_T0000428:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6843580	6843748	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=exon:NA12877_ch_T0000428:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6843749	6865548	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=intron:NA12877_ch_T0000428:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6865549	6865812	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=exon:NA12877_ch_T0000428:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6865813	6880757	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=intron:NA12877_ch_T0000428:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6880758	6880877	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=exon:NA12877_ch_T0000428:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6880878	6895778	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=intron:NA12877_ch_T0000428:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6895779	6895874	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=exon:NA12877_ch_T0000428:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6895875	6906999	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=intron:NA12877_ch_T0000428:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6907000	6907077	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=exon:NA12877_ch_T0000428:5;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6907078	6911386	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=intron:NA12877_ch_T0000428:5;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6911387	6911533	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=exon:NA12877_ch_T0000428:6;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6911534	6915355	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=intron:NA12877_ch_T0000428:6;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6915356	6921192	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000428;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000428;transcript_name=NA12877_ch_T0000428;gene_name=PRKY;ID=exon:NA12877_ch_T0000428:7;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6814220	6830400	1000	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000430;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_G0000111;transcript_name=NA12877_ch_T0000430;gene_name=PRKY;ID=NA12877_ch_T0000430;Name=PRKY
NA12877_chrY	CAT	exon	6814220	6814708	.	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000430;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000430;transcript_name=NA12877_ch_T0000430;gene_name=PRKY;ID=exon:NA12877_ch_T0000430:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6814709	6830157	.	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000430;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000430;transcript_name=NA12877_ch_T0000430;gene_name=PRKY;ID=intron:NA12877_ch_T0000430:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6830158	6830400	.	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000430;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000430;transcript_name=NA12877_ch_T0000430;gene_name=PRKY;ID=exon:NA12877_ch_T0000430:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6814417	6830400	1000	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000431;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_G0000111;transcript_name=NA12877_ch_T0000431;gene_name=PRKY;ID=NA12877_ch_T0000431;Name=PRKY
NA12877_chrY	CAT	exon	6814417	6814708	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000431;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000431;transcript_name=NA12877_ch_T0000431;gene_name=PRKY;ID=exon:NA12877_ch_T0000431:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6814709	6824670	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000431;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000431;transcript_name=NA12877_ch_T0000431;gene_name=PRKY;ID=intron:NA12877_ch_T0000431:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6824671	6824762	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000431;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000431;transcript_name=NA12877_ch_T0000431;gene_name=PRKY;ID=exon:NA12877_ch_T0000431:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6824763	6830157	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000431;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000431;transcript_name=NA12877_ch_T0000431;gene_name=PRKY;ID=intron:NA12877_ch_T0000431:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6830158	6830400	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000431;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000431;transcript_name=NA12877_ch_T0000431;gene_name=PRKY;ID=exon:NA12877_ch_T0000431:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6814469	6915743	1000	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_G0000111;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=NA12877_ch_T0000432;Name=PRKY
NA12877_chrY	CAT	exon	6814469	6814708	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=exon:NA12877_ch_T0000432:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6814709	6843579	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=intron:NA12877_ch_T0000432:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6843580	6843748	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=exon:NA12877_ch_T0000432:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6843749	6865548	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=intron:NA12877_ch_T0000432:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6865549	6865812	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=exon:NA12877_ch_T0000432:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6865813	6867669	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=intron:NA12877_ch_T0000432:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6867670	6867791	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=exon:NA12877_ch_T0000432:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6867792	6880757	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=intron:NA12877_ch_T0000432:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6880758	6880877	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=exon:NA12877_ch_T0000432:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6880878	6895778	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=intron:NA12877_ch_T0000432:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6895779	6895874	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=exon:NA12877_ch_T0000432:5;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6895875	6906999	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=intron:NA12877_ch_T0000432:5;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6907000	6907077	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=exon:NA12877_ch_T0000432:6;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6907078	6911386	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=intron:NA12877_ch_T0000432:6;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6911387	6911533	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=exon:NA12877_ch_T0000432:7;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6911534	6915355	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=intron:NA12877_ch_T0000432:7;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6915356	6915743	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000432;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000432;transcript_name=NA12877_ch_T0000432;gene_name=PRKY;ID=exon:NA12877_ch_T0000432:8;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6814561	6881858	1000	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000433;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_G0000111;transcript_name=NA12877_ch_T0000433;gene_name=PRKY;ID=NA12877_ch_T0000433;Name=PRKY
NA12877_chrY	CAT	exon	6814561	6814708	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000433;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000433;transcript_name=NA12877_ch_T0000433;gene_name=PRKY;ID=exon:NA12877_ch_T0000433:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6814709	6843579	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000433;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000433;transcript_name=NA12877_ch_T0000433;gene_name=PRKY;ID=intron:NA12877_ch_T0000433:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6843580	6843748	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000433;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000433;transcript_name=NA12877_ch_T0000433;gene_name=PRKY;ID=exon:NA12877_ch_T0000433:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6843749	6865548	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000433;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000433;transcript_name=NA12877_ch_T0000433;gene_name=PRKY;ID=intron:NA12877_ch_T0000433:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6865549	6865812	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000433;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000433;transcript_name=NA12877_ch_T0000433;gene_name=PRKY;ID=exon:NA12877_ch_T0000433:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6865813	6880757	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000433;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000433;transcript_name=NA12877_ch_T0000433;gene_name=PRKY;ID=intron:NA12877_ch_T0000433:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6880758	6881858	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000433;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000433;transcript_name=NA12877_ch_T0000433;gene_name=PRKY;ID=exon:NA12877_ch_T0000433:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6814605	6916071	1000	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_G0000111;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=NA12877_ch_T0000434;Name=PRKY
NA12877_chrY	CAT	exon	6814605	6814708	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=exon:NA12877_ch_T0000434:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6814709	6843579	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=intron:NA12877_ch_T0000434:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6843580	6843748	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=exon:NA12877_ch_T0000434:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6843749	6865548	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=intron:NA12877_ch_T0000434:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6865549	6865812	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=exon:NA12877_ch_T0000434:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6865813	6895778	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=intron:NA12877_ch_T0000434:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6895779	6895874	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=exon:NA12877_ch_T0000434:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6895875	6906999	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=intron:NA12877_ch_T0000434:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6907000	6907077	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=exon:NA12877_ch_T0000434:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6907078	6911386	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=intron:NA12877_ch_T0000434:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6911387	6911533	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=exon:NA12877_ch_T0000434:5;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6911534	6915355	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=intron:NA12877_ch_T0000434:5;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6915356	6916071	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000434;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000434;transcript_name=NA12877_ch_T0000434;gene_name=PRKY;ID=exon:NA12877_ch_T0000434:6;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6865710	6868046	1000	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000436;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_G0000111;transcript_name=NA12877_ch_T0000436;gene_name=PRKY;ID=NA12877_ch_T0000436;Name=PRKY
NA12877_chrY	CAT	exon	6865710	6865812	.	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000436;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000436;transcript_name=NA12877_ch_T0000436;gene_name=PRKY;ID=exon:NA12877_ch_T0000436:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6865813	6867669	.	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000436;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000436;transcript_name=NA12877_ch_T0000436;gene_name=PRKY;ID=intron:NA12877_ch_T0000436:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6867670	6868046	.	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000436;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000436;transcript_name=NA12877_ch_T0000436;gene_name=PRKY;ID=exon:NA12877_ch_T0000436:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6872673	6895867	1000	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000437;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_G0000111;transcript_name=NA12877_ch_T0000437;gene_name=PRKY;ID=NA12877_ch_T0000437;Name=PRKY
NA12877_chrY	CAT	exon	6872673	6872751	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000437;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000437;transcript_name=NA12877_ch_T0000437;gene_name=PRKY;ID=exon:NA12877_ch_T0000437:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6872752	6880757	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000437;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000437;transcript_name=NA12877_ch_T0000437;gene_name=PRKY;ID=intron:NA12877_ch_T0000437:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6880758	6880877	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000437;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000437;transcript_name=NA12877_ch_T0000437;gene_name=PRKY;ID=exon:NA12877_ch_T0000437:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6880878	6895778	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000437;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000437;transcript_name=NA12877_ch_T0000437;gene_name=PRKY;ID=intron:NA12877_ch_T0000437:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6895779	6895867	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000437;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000437;transcript_name=NA12877_ch_T0000437;gene_name=PRKY;ID=exon:NA12877_ch_T0000437:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6879603	6915743	1000	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000438;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_G0000111;transcript_name=NA12877_ch_T0000438;gene_name=PRKY;ID=NA12877_ch_T0000438;Name=PRKY
NA12877_chrY	CAT	exon	6879603	6879665	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000438;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000438;transcript_name=NA12877_ch_T0000438;gene_name=PRKY;ID=exon:NA12877_ch_T0000438:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6879666	6880757	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000438;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000438;transcript_name=NA12877_ch_T0000438;gene_name=PRKY;ID=intron:NA12877_ch_T0000438:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6880758	6880877	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000438;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000438;transcript_name=NA12877_ch_T0000438;gene_name=PRKY;ID=exon:NA12877_ch_T0000438:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6880878	6895778	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000438;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000438;transcript_name=NA12877_ch_T0000438;gene_name=PRKY;ID=intron:NA12877_ch_T0000438:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6895779	6895874	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000438;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000438;transcript_name=NA12877_ch_T0000438;gene_name=PRKY;ID=exon:NA12877_ch_T0000438:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6895875	6906999	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000438;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000438;transcript_name=NA12877_ch_T0000438;gene_name=PRKY;ID=intron:NA12877_ch_T0000438:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6907000	6907077	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000438;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000438;transcript_name=NA12877_ch_T0000438;gene_name=PRKY;ID=exon:NA12877_ch_T0000438:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6907078	6911386	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000438;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000438;transcript_name=NA12877_ch_T0000438;gene_name=PRKY;ID=intron:NA12877_ch_T0000438:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6911387	6911533	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000438;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000438;transcript_name=NA12877_ch_T0000438;gene_name=PRKY;ID=exon:NA12877_ch_T0000438:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6911534	6915355	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000438;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000438;transcript_name=NA12877_ch_T0000438;gene_name=PRKY;ID=intron:NA12877_ch_T0000438:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6915356	6915743	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000438;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000438;transcript_name=NA12877_ch_T0000438;gene_name=PRKY;ID=exon:NA12877_ch_T0000438:5;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6879604	6912759	1000	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000439;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_G0000111;transcript_name=NA12877_ch_T0000439;gene_name=PRKY;ID=NA12877_ch_T0000439;Name=PRKY
NA12877_chrY	CAT	exon	6879604	6879665	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000439;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000439;transcript_name=NA12877_ch_T0000439;gene_name=PRKY;ID=exon:NA12877_ch_T0000439:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6879666	6880757	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000439;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000439;transcript_name=NA12877_ch_T0000439;gene_name=PRKY;ID=intron:NA12877_ch_T0000439:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6880758	6880877	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000439;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000439;transcript_name=NA12877_ch_T0000439;gene_name=PRKY;ID=exon:NA12877_ch_T0000439:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6880878	6895778	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000439;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000439;transcript_name=NA12877_ch_T0000439;gene_name=PRKY;ID=intron:NA12877_ch_T0000439:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6895779	6895874	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000439;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000439;transcript_name=NA12877_ch_T0000439;gene_name=PRKY;ID=exon:NA12877_ch_T0000439:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6895875	6906999	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000439;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000439;transcript_name=NA12877_ch_T0000439;gene_name=PRKY;ID=intron:NA12877_ch_T0000439:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6907000	6907077	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000439;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000439;transcript_name=NA12877_ch_T0000439;gene_name=PRKY;ID=exon:NA12877_ch_T0000439:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6907078	6911386	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000439;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000439;transcript_name=NA12877_ch_T0000439;gene_name=PRKY;ID=intron:NA12877_ch_T0000439:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6911387	6911533	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000439;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000439;transcript_name=NA12877_ch_T0000439;gene_name=PRKY;ID=exon:NA12877_ch_T0000439:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6911534	6912375	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000439;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000439;transcript_name=NA12877_ch_T0000439;gene_name=PRKY;ID=intron:NA12877_ch_T0000439:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6912376	6912759	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000439;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000439;transcript_name=NA12877_ch_T0000439;gene_name=PRKY;ID=exon:NA12877_ch_T0000439:5;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	6879662	6915744	1000	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000440;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_G0000111;transcript_name=NA12877_ch_T0000440;gene_name=PRKY;ID=NA12877_ch_T0000440;Name=PRKY
NA12877_chrY	CAT	exon	6879662	6879807	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000440;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000440;transcript_name=NA12877_ch_T0000440;gene_name=PRKY;ID=exon:NA12877_ch_T0000440:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6879808	6880757	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000440;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000440;transcript_name=NA12877_ch_T0000440;gene_name=PRKY;ID=intron:NA12877_ch_T0000440:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6880758	6880877	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000440;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000440;transcript_name=NA12877_ch_T0000440;gene_name=PRKY;ID=exon:NA12877_ch_T0000440:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6880878	6895778	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000440;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000440;transcript_name=NA12877_ch_T0000440;gene_name=PRKY;ID=intron:NA12877_ch_T0000440:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6895779	6895874	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000440;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000440;transcript_name=NA12877_ch_T0000440;gene_name=PRKY;ID=exon:NA12877_ch_T0000440:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6895875	6906999	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000440;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000440;transcript_name=NA12877_ch_T0000440;gene_name=PRKY;ID=intron:NA12877_ch_T0000440:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6907000	6907077	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000440;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000440;transcript_name=NA12877_ch_T0000440;gene_name=PRKY;ID=exon:NA12877_ch_T0000440:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6907078	6911386	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000440;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000440;transcript_name=NA12877_ch_T0000440;gene_name=PRKY;ID=intron:NA12877_ch_T0000440:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6911387	6911533	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000440;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000440;transcript_name=NA12877_ch_T0000440;gene_name=PRKY;ID=exon:NA12877_ch_T0000440:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6911534	6915355	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000440;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000440;transcript_name=NA12877_ch_T0000440;gene_name=PRKY;ID=intron:NA12877_ch_T0000440:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6915356	6915744	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000440;gene_id=NA12877_ch_G0000111;Parent=NA12877_ch_T0000440;transcript_name=NA12877_ch_T0000440;gene_name=PRKY;ID=exon:NA12877_ch_T0000440:5;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6813956	6911512	.	+	.	source_gene_common_name=PRKY;source_gene=ENSG00000099725.15;gene_id=NA12877_ch_G0000112;gene_biotype=transcribed_unitary_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=NA12877_ch_G0000112;Name=PRKY
NA12877_chrY	CAT	transcript	6813956	6911512	1000	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_G0000112;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=NA12877_ch_T0000429;Name=PRKY
NA12877_chrY	CAT	exon	6813956	6814121	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=exon:NA12877_ch_T0000429:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6814122	6843579	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=intron:NA12877_ch_T0000429:0;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6843580	6843748	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=exon:NA12877_ch_T0000429:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6843749	6865548	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=intron:NA12877_ch_T0000429:1;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6865549	6865812	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=exon:NA12877_ch_T0000429:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6865813	6880757	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=intron:NA12877_ch_T0000429:2;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6880758	6880877	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=exon:NA12877_ch_T0000429:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6880878	6895778	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=intron:NA12877_ch_T0000429:3;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6895779	6895874	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=exon:NA12877_ch_T0000429:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6895875	6906999	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=intron:NA12877_ch_T0000429:4;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6907000	6907077	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=exon:NA12877_ch_T0000429:5;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6907078	6911386	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=intron:NA12877_ch_T0000429:5;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	6911387	6911512	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=NA12877_ch_T0000429;gene_id=NA12877_ch_G0000112;Parent=NA12877_ch_T0000429;transcript_name=NA12877_ch_T0000429;gene_name=PRKY;ID=exon:NA12877_ch_T0000429:6;Name=PRKY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6863940	6864238	.	-	.	source_gene_common_name=RN7SKP282;source_gene=ENSG00000252633.1;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;gene_id=NA12877_ch_G0000113;gene_biotype=misc_RNA;gene_name=RN7SKP282;gene_sources=liftoff;ID=NA12877_ch_G0000113;Name=RN7SKP282
NA12877_chrY	CAT	transcript	6863940	6864238	1000	-	.	source_transcript=ENST00000516824.1;source_transcript_name=RN7SKP282-201;source_gene=ENSG00000252633.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000252633.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516824.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SKP282;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;transcript_id=NA12877_ch_T0000435;gene_id=NA12877_ch_G0000113;Parent=NA12877_ch_G0000113;transcript_name=NA12877_ch_T0000435;gene_name=RN7SKP282;ID=NA12877_ch_T0000435;Name=RN7SKP282
NA12877_chrY	CAT	exon	6863940	6864238	.	-	.	source_transcript=ENST00000516824.1;source_transcript_name=RN7SKP282-201;source_gene=ENSG00000252633.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000252633.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516824.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SKP282;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;transcript_id=NA12877_ch_T0000435;gene_id=NA12877_ch_G0000113;Parent=NA12877_ch_T0000435;transcript_name=NA12877_ch_T0000435;gene_name=RN7SKP282;ID=exon:NA12877_ch_T0000435:0;Name=RN7SKP282;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6881174	6881285	.	+	.	source_gene_common_name=Y_RNA;source_gene=ENSG00000251996.1;gene_id=NA12877_ch_G0000114;gene_biotype=misc_RNA;gene_name=Y_RNA;gene_sources=liftoff;ID=NA12877_ch_G0000114;Name=Y_RNA
NA12877_chrY	CAT	transcript	6881174	6881285	1000	+	.	source_transcript=ENST00000516187.1;source_transcript_name=Y_RNA.666-201;source_gene=ENSG00000251996.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000251996.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Y_RNA;transcript_id=NA12877_ch_T0000441;gene_id=NA12877_ch_G0000114;Parent=NA12877_ch_G0000114;transcript_name=NA12877_ch_T0000441;gene_name=Y_RNA;ID=NA12877_ch_T0000441;Name=Y_RNA
NA12877_chrY	CAT	exon	6881174	6881285	.	+	.	source_transcript=ENST00000516187.1;source_transcript_name=Y_RNA.666-201;source_gene=ENSG00000251996.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000251996.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Y_RNA;transcript_id=NA12877_ch_T0000441;gene_id=NA12877_ch_G0000114;Parent=NA12877_ch_T0000441;transcript_name=NA12877_ch_T0000441;gene_name=Y_RNA;ID=exon:NA12877_ch_T0000441:0;Name=Y_RNA;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6918316	6918423	.	+	.	source_gene_common_name=RNU6-941P;source_gene=ENSG00000252155.1;gene_id=NA12877_ch_G0000115;gene_biotype=snRNA;gene_name=RNU6-941P;gene_sources=liftoff;ID=NA12877_ch_G0000115;Name=RNU6-941P
NA12877_chrY	CAT	transcript	6918316	6918423	1000	+	.	source_transcript=ENST00000516346.1;source_transcript_name=RNU6-941P-201;source_gene=ENSG00000252155.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252155.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-941P;transcript_id=NA12877_ch_T0000442;gene_id=NA12877_ch_G0000115;Parent=NA12877_ch_G0000115;transcript_name=NA12877_ch_T0000442;gene_name=RNU6-941P;ID=NA12877_ch_T0000442;Name=RNU6-941P
NA12877_chrY	CAT	exon	6918316	6918423	.	+	.	source_transcript=ENST00000516346.1;source_transcript_name=RNU6-941P-201;source_gene=ENSG00000252155.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252155.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-941P;transcript_id=NA12877_ch_T0000442;gene_id=NA12877_ch_G0000115;Parent=NA12877_ch_T0000442;transcript_name=NA12877_ch_T0000442;gene_name=RNU6-941P;ID=exon:NA12877_ch_T0000442:0;Name=RNU6-941P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6962698	6962802	.	-	.	source_gene_common_name=RNU6-521P;source_gene=ENSG00000252472.1;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;gene_id=NA12877_ch_G0000116;gene_biotype=snRNA;gene_name=RNU6-521P;gene_sources=liftoff;ID=NA12877_ch_G0000116;Name=RNU6-521P
NA12877_chrY	CAT	transcript	6962698	6962802	1000	-	.	source_transcript=ENST00000516663.1;source_transcript_name=RNU6-521P-201;source_gene=ENSG00000252472.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252472.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516663.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-521P;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;transcript_id=NA12877_ch_T0000443;gene_id=NA12877_ch_G0000116;Parent=NA12877_ch_G0000116;transcript_name=NA12877_ch_T0000443;gene_name=RNU6-521P;ID=NA12877_ch_T0000443;Name=RNU6-521P
NA12877_chrY	CAT	exon	6962698	6962802	.	-	.	source_transcript=ENST00000516663.1;source_transcript_name=RNU6-521P-201;source_gene=ENSG00000252472.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252472.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516663.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-521P;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;transcript_id=NA12877_ch_T0000443;gene_id=NA12877_ch_G0000116;Parent=NA12877_ch_T0000443;transcript_name=NA12877_ch_T0000443;gene_name=RNU6-521P;ID=exon:NA12877_ch_T0000443:0;Name=RNU6-521P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	6974132	7060185	.	+	.	source_gene_common_name=ENSG00000295056;source_gene=ENSG00000295056.1;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;gene_id=NA12877_ch_G0000117;gene_biotype=lncRNA;gene_name=ENSG00000295056;gene_sources=liftoff;ID=NA12877_ch_G0000117;Name=ENSG00000295056
NA12877_chrY	CAT	transcript	6974132	7060185	1000	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=NA12877_ch_T0000444;gene_id=NA12877_ch_G0000117;Parent=NA12877_ch_G0000117;transcript_name=NA12877_ch_T0000444;gene_name=ENSG00000295056;ID=NA12877_ch_T0000444;Name=ENSG00000295056
NA12877_chrY	CAT	exon	6974132	6974221	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=NA12877_ch_T0000444;gene_id=NA12877_ch_G0000117;Parent=NA12877_ch_T0000444;transcript_name=NA12877_ch_T0000444;gene_name=ENSG00000295056;ID=exon:NA12877_ch_T0000444:0;Name=ENSG00000295056;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	6974222	7040652	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=NA12877_ch_T0000444;gene_id=NA12877_ch_G0000117;Parent=NA12877_ch_T0000444;transcript_name=NA12877_ch_T0000444;gene_name=ENSG00000295056;ID=intron:NA12877_ch_T0000444:0;Name=ENSG00000295056;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7040653	7040811	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=NA12877_ch_T0000444;gene_id=NA12877_ch_G0000117;Parent=NA12877_ch_T0000444;transcript_name=NA12877_ch_T0000444;gene_name=ENSG00000295056;ID=exon:NA12877_ch_T0000444:1;Name=ENSG00000295056;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7040812	7058583	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=NA12877_ch_T0000444;gene_id=NA12877_ch_G0000117;Parent=NA12877_ch_T0000444;transcript_name=NA12877_ch_T0000444;gene_name=ENSG00000295056;ID=intron:NA12877_ch_T0000444:1;Name=ENSG00000295056;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7058584	7058692	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=NA12877_ch_T0000444;gene_id=NA12877_ch_G0000117;Parent=NA12877_ch_T0000444;transcript_name=NA12877_ch_T0000444;gene_name=ENSG00000295056;ID=exon:NA12877_ch_T0000444:2;Name=ENSG00000295056;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7058693	7059724	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=NA12877_ch_T0000444;gene_id=NA12877_ch_G0000117;Parent=NA12877_ch_T0000444;transcript_name=NA12877_ch_T0000444;gene_name=ENSG00000295056;ID=intron:NA12877_ch_T0000444:2;Name=ENSG00000295056;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7059725	7060185	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=NA12877_ch_T0000444;gene_id=NA12877_ch_G0000117;Parent=NA12877_ch_T0000444;transcript_name=NA12877_ch_T0000444;gene_name=ENSG00000295056;ID=exon:NA12877_ch_T0000444:3;Name=ENSG00000295056;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7196711	7197095	.	+	.	source_gene_common_name=ENSG00000275280;source_gene=ENSG00000275280.1;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;gene_id=NA12877_ch_G0000118;gene_biotype=processed_pseudogene;gene_name=ENSG00000275280;gene_sources=liftoff;ID=NA12877_ch_G0000118;Name=ENSG00000275280
NA12877_chrY	CAT	transcript	7196711	7197095	1000	+	.	source_transcript=ENST00000619838.1;source_transcript_name=ENST00000619838;source_gene=ENSG00000275280.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275280.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619838.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275280;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;transcript_id=NA12877_ch_T0000445;gene_id=NA12877_ch_G0000118;Parent=NA12877_ch_G0000118;transcript_name=NA12877_ch_T0000445;gene_name=ENSG00000275280;ID=NA12877_ch_T0000445;Name=ENSG00000275280
NA12877_chrY	CAT	exon	7196711	7197095	.	+	.	source_transcript=ENST00000619838.1;source_transcript_name=ENST00000619838;source_gene=ENSG00000275280.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275280.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619838.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275280;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;transcript_id=NA12877_ch_T0000445;gene_id=NA12877_ch_G0000118;Parent=NA12877_ch_T0000445;transcript_name=NA12877_ch_T0000445;gene_name=ENSG00000275280;ID=exon:NA12877_ch_T0000445:0;Name=ENSG00000275280;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7211483	7215764	.	-	.	source_gene_common_name=RBMY2HP;source_gene=ENSG00000238073.1;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;gene_id=NA12877_ch_G0000119;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2HP;gene_sources=liftoff;ID=NA12877_ch_G0000119;Name=RBMY2HP
NA12877_chrY	CAT	transcript	7211483	7215764	1000	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=NA12877_ch_T0000446;gene_id=NA12877_ch_G0000119;Parent=NA12877_ch_G0000119;transcript_name=NA12877_ch_T0000446;gene_name=RBMY2HP;ID=NA12877_ch_T0000446;Name=RBMY2HP
NA12877_chrY	CAT	exon	7211483	7211782	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=NA12877_ch_T0000446;gene_id=NA12877_ch_G0000119;Parent=NA12877_ch_T0000446;transcript_name=NA12877_ch_T0000446;gene_name=RBMY2HP;ID=exon:NA12877_ch_T0000446:0;Name=RBMY2HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7211783	7212189	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=NA12877_ch_T0000446;gene_id=NA12877_ch_G0000119;Parent=NA12877_ch_T0000446;transcript_name=NA12877_ch_T0000446;gene_name=RBMY2HP;ID=intron:NA12877_ch_T0000446:0;Name=RBMY2HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7212190	7212278	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=NA12877_ch_T0000446;gene_id=NA12877_ch_G0000119;Parent=NA12877_ch_T0000446;transcript_name=NA12877_ch_T0000446;gene_name=RBMY2HP;ID=exon:NA12877_ch_T0000446:1;Name=RBMY2HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7212279	7212367	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=NA12877_ch_T0000446;gene_id=NA12877_ch_G0000119;Parent=NA12877_ch_T0000446;transcript_name=NA12877_ch_T0000446;gene_name=RBMY2HP;ID=intron:NA12877_ch_T0000446:1;Name=RBMY2HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7212368	7212478	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=NA12877_ch_T0000446;gene_id=NA12877_ch_G0000119;Parent=NA12877_ch_T0000446;transcript_name=NA12877_ch_T0000446;gene_name=RBMY2HP;ID=exon:NA12877_ch_T0000446:2;Name=RBMY2HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7212479	7215105	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=NA12877_ch_T0000446;gene_id=NA12877_ch_G0000119;Parent=NA12877_ch_T0000446;transcript_name=NA12877_ch_T0000446;gene_name=RBMY2HP;ID=intron:NA12877_ch_T0000446:2;Name=RBMY2HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7215106	7215211	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=NA12877_ch_T0000446;gene_id=NA12877_ch_G0000119;Parent=NA12877_ch_T0000446;transcript_name=NA12877_ch_T0000446;gene_name=RBMY2HP;ID=exon:NA12877_ch_T0000446:3;Name=RBMY2HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7215212	7215650	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=NA12877_ch_T0000446;gene_id=NA12877_ch_G0000119;Parent=NA12877_ch_T0000446;transcript_name=NA12877_ch_T0000446;gene_name=RBMY2HP;ID=intron:NA12877_ch_T0000446:3;Name=RBMY2HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7215651	7215764	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=NA12877_ch_T0000446;gene_id=NA12877_ch_G0000119;Parent=NA12877_ch_T0000446;transcript_name=NA12877_ch_T0000446;gene_name=RBMY2HP;ID=exon:NA12877_ch_T0000446:4;Name=RBMY2HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7218640	7220769	.	+	.	source_gene_common_name=ENSG00000223422;source_gene=ENSG00000223422.1;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;gene_id=NA12877_ch_G0000120;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000223422;gene_sources=liftoff;ID=NA12877_ch_G0000120;Name=ENSG00000223422
NA12877_chrY	CAT	transcript	7218640	7220769	1000	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=NA12877_ch_T0000447;gene_id=NA12877_ch_G0000120;Parent=NA12877_ch_G0000120;transcript_name=NA12877_ch_T0000447;gene_name=ENSG00000223422;ID=NA12877_ch_T0000447;Name=ENSG00000223422
NA12877_chrY	CAT	exon	7218640	7218951	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=NA12877_ch_T0000447;gene_id=NA12877_ch_G0000120;Parent=NA12877_ch_T0000447;transcript_name=NA12877_ch_T0000447;gene_name=ENSG00000223422;ID=exon:NA12877_ch_T0000447:0;Name=ENSG00000223422;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7218952	7220007	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=NA12877_ch_T0000447;gene_id=NA12877_ch_G0000120;Parent=NA12877_ch_T0000447;transcript_name=NA12877_ch_T0000447;gene_name=ENSG00000223422;ID=intron:NA12877_ch_T0000447:0;Name=ENSG00000223422;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7220008	7220073	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=NA12877_ch_T0000447;gene_id=NA12877_ch_G0000120;Parent=NA12877_ch_T0000447;transcript_name=NA12877_ch_T0000447;gene_name=ENSG00000223422;ID=exon:NA12877_ch_T0000447:1;Name=ENSG00000223422;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7220074	7220268	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=NA12877_ch_T0000447;gene_id=NA12877_ch_G0000120;Parent=NA12877_ch_T0000447;transcript_name=NA12877_ch_T0000447;gene_name=ENSG00000223422;ID=intron:NA12877_ch_T0000447:1;Name=ENSG00000223422;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7220269	7220361	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=NA12877_ch_T0000447;gene_id=NA12877_ch_G0000120;Parent=NA12877_ch_T0000447;transcript_name=NA12877_ch_T0000447;gene_name=ENSG00000223422;ID=exon:NA12877_ch_T0000447:2;Name=ENSG00000223422;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7220362	7220460	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=NA12877_ch_T0000447;gene_id=NA12877_ch_G0000120;Parent=NA12877_ch_T0000447;transcript_name=NA12877_ch_T0000447;gene_name=ENSG00000223422;ID=intron:NA12877_ch_T0000447:2;Name=ENSG00000223422;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7220461	7220605	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=NA12877_ch_T0000447;gene_id=NA12877_ch_G0000120;Parent=NA12877_ch_T0000447;transcript_name=NA12877_ch_T0000447;gene_name=ENSG00000223422;ID=exon:NA12877_ch_T0000447:3;Name=ENSG00000223422;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7220606	7220723	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=NA12877_ch_T0000447;gene_id=NA12877_ch_G0000120;Parent=NA12877_ch_T0000447;transcript_name=NA12877_ch_T0000447;gene_name=ENSG00000223422;ID=intron:NA12877_ch_T0000447:3;Name=ENSG00000223422;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7220724	7220769	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=NA12877_ch_T0000447;gene_id=NA12877_ch_G0000120;Parent=NA12877_ch_T0000447;transcript_name=NA12877_ch_T0000447;gene_name=ENSG00000223422;ID=exon:NA12877_ch_T0000447:4;Name=ENSG00000223422;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7227476	7229285	.	-	.	source_gene_common_name=TSPY12P;source_gene=ENSG00000236435.1;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;gene_id=NA12877_ch_G0000121;gene_biotype=unprocessed_pseudogene;gene_name=TSPY12P;gene_sources=liftoff;ID=NA12877_ch_G0000121;Name=TSPY12P
NA12877_chrY	CAT	transcript	7227476	7229285	1000	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=NA12877_ch_T0000448;gene_id=NA12877_ch_G0000121;Parent=NA12877_ch_G0000121;transcript_name=NA12877_ch_T0000448;gene_name=TSPY12P;ID=NA12877_ch_T0000448;Name=TSPY12P
NA12877_chrY	CAT	exon	7227476	7227540	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=NA12877_ch_T0000448;gene_id=NA12877_ch_G0000121;Parent=NA12877_ch_T0000448;transcript_name=NA12877_ch_T0000448;gene_name=TSPY12P;ID=exon:NA12877_ch_T0000448:0;Name=TSPY12P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7227541	7227633	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=NA12877_ch_T0000448;gene_id=NA12877_ch_G0000121;Parent=NA12877_ch_T0000448;transcript_name=NA12877_ch_T0000448;gene_name=TSPY12P;ID=intron:NA12877_ch_T0000448:0;Name=TSPY12P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7227634	7227779	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=NA12877_ch_T0000448;gene_id=NA12877_ch_G0000121;Parent=NA12877_ch_T0000448;transcript_name=NA12877_ch_T0000448;gene_name=TSPY12P;ID=exon:NA12877_ch_T0000448:1;Name=TSPY12P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7227780	7227877	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=NA12877_ch_T0000448;gene_id=NA12877_ch_G0000121;Parent=NA12877_ch_T0000448;transcript_name=NA12877_ch_T0000448;gene_name=TSPY12P;ID=intron:NA12877_ch_T0000448:1;Name=TSPY12P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7227878	7227988	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=NA12877_ch_T0000448;gene_id=NA12877_ch_G0000121;Parent=NA12877_ch_T0000448;transcript_name=NA12877_ch_T0000448;gene_name=TSPY12P;ID=exon:NA12877_ch_T0000448:2;Name=TSPY12P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7227989	7228119	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=NA12877_ch_T0000448;gene_id=NA12877_ch_G0000121;Parent=NA12877_ch_T0000448;transcript_name=NA12877_ch_T0000448;gene_name=TSPY12P;ID=intron:NA12877_ch_T0000448:2;Name=TSPY12P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7228120	7228193	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=NA12877_ch_T0000448;gene_id=NA12877_ch_G0000121;Parent=NA12877_ch_T0000448;transcript_name=NA12877_ch_T0000448;gene_name=TSPY12P;ID=exon:NA12877_ch_T0000448:3;Name=TSPY12P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7228194	7228813	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=NA12877_ch_T0000448;gene_id=NA12877_ch_G0000121;Parent=NA12877_ch_T0000448;transcript_name=NA12877_ch_T0000448;gene_name=TSPY12P;ID=intron:NA12877_ch_T0000448:3;Name=TSPY12P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7228814	7229285	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=NA12877_ch_T0000448;gene_id=NA12877_ch_G0000121;Parent=NA12877_ch_T0000448;transcript_name=NA12877_ch_T0000448;gene_name=TSPY12P;ID=exon:NA12877_ch_T0000448:4;Name=TSPY12P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7230248	7232415	.	+	.	source_gene_common_name=ENSG00000236690;source_gene=ENSG00000236690.2;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;gene_id=NA12877_ch_G0000122;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236690;gene_sources=liftoff;ID=NA12877_ch_G0000122;Name=ENSG00000236690
NA12877_chrY	CAT	transcript	7230248	7232415	1000	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=NA12877_ch_T0000449;gene_id=NA12877_ch_G0000122;Parent=NA12877_ch_G0000122;transcript_name=NA12877_ch_T0000449;gene_name=ENSG00000236690;ID=NA12877_ch_T0000449;Name=ENSG00000236690
NA12877_chrY	CAT	exon	7230248	7230574	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=NA12877_ch_T0000449;gene_id=NA12877_ch_G0000122;Parent=NA12877_ch_T0000449;transcript_name=NA12877_ch_T0000449;gene_name=ENSG00000236690;ID=exon:NA12877_ch_T0000449:0;Name=ENSG00000236690;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7230575	7231896	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=NA12877_ch_T0000449;gene_id=NA12877_ch_G0000122;Parent=NA12877_ch_T0000449;transcript_name=NA12877_ch_T0000449;gene_name=ENSG00000236690;ID=intron:NA12877_ch_T0000449:0;Name=ENSG00000236690;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7231897	7232014	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=NA12877_ch_T0000449;gene_id=NA12877_ch_G0000122;Parent=NA12877_ch_T0000449;transcript_name=NA12877_ch_T0000449;gene_name=ENSG00000236690;ID=exon:NA12877_ch_T0000449:1;Name=ENSG00000236690;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7232015	7232100	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=NA12877_ch_T0000449;gene_id=NA12877_ch_G0000122;Parent=NA12877_ch_T0000449;transcript_name=NA12877_ch_T0000449;gene_name=ENSG00000236690;ID=intron:NA12877_ch_T0000449:1;Name=ENSG00000236690;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7232101	7232270	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=NA12877_ch_T0000449;gene_id=NA12877_ch_G0000122;Parent=NA12877_ch_T0000449;transcript_name=NA12877_ch_T0000449;gene_name=ENSG00000236690;ID=exon:NA12877_ch_T0000449:2;Name=ENSG00000236690;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7232271	7232368	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=NA12877_ch_T0000449;gene_id=NA12877_ch_G0000122;Parent=NA12877_ch_T0000449;transcript_name=NA12877_ch_T0000449;gene_name=ENSG00000236690;ID=intron:NA12877_ch_T0000449:2;Name=ENSG00000236690;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7232369	7232415	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=NA12877_ch_T0000449;gene_id=NA12877_ch_G0000122;Parent=NA12877_ch_T0000449;transcript_name=NA12877_ch_T0000449;gene_name=ENSG00000236690;ID=exon:NA12877_ch_T0000449:3;Name=ENSG00000236690;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7234444	7350038	.	-	.	source_gene_common_name=TTTY16;source_gene=ENSG00000290323.2;gene_id=NA12877_ch_G0000123;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=NA12877_ch_G0000123;Name=TTTY16
NA12877_chrY	CAT	transcript	7234444	7349000	1000	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=NA12877_ch_T0000450;Name=TTTY16
NA12877_chrY	CAT	exon	7234444	7234854	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=exon:NA12877_ch_T0000450:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7234855	7236816	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=intron:NA12877_ch_T0000450:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7236817	7237011	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=exon:NA12877_ch_T0000450:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7237012	7238923	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=intron:NA12877_ch_T0000450:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7238924	7239224	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=exon:NA12877_ch_T0000450:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7239225	7240923	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=intron:NA12877_ch_T0000450:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7240924	7241000	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=exon:NA12877_ch_T0000450:3;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7241001	7250907	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=intron:NA12877_ch_T0000450:3;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7250908	7251056	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=exon:NA12877_ch_T0000450:4;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7251057	7252605	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=intron:NA12877_ch_T0000450:4;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7252606	7252834	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=exon:NA12877_ch_T0000450:5;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7252835	7316253	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=intron:NA12877_ch_T0000450:5;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316254	7316437	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=exon:NA12877_ch_T0000450:6;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7316438	7348886	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=intron:NA12877_ch_T0000450:6;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7348887	7349000	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000450;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000450;transcript_name=NA12877_ch_T0000450;gene_name=TTTY16;ID=exon:NA12877_ch_T0000450:7;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7234447	7316960	1000	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=NA12877_ch_T0000451;Name=TTTY16
NA12877_chrY	CAT	exon	7234447	7235521	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=exon:NA12877_ch_T0000451:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7235522	7236816	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=intron:NA12877_ch_T0000451:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7236817	7237011	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=exon:NA12877_ch_T0000451:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7237012	7238923	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=intron:NA12877_ch_T0000451:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7238924	7239224	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=exon:NA12877_ch_T0000451:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7239225	7240923	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=intron:NA12877_ch_T0000451:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7240924	7241000	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=exon:NA12877_ch_T0000451:3;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7241001	7250907	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=intron:NA12877_ch_T0000451:3;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7250908	7251056	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=exon:NA12877_ch_T0000451:4;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7251057	7252605	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=intron:NA12877_ch_T0000451:4;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7252606	7252834	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=exon:NA12877_ch_T0000451:5;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7252835	7309666	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=intron:NA12877_ch_T0000451:5;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7309667	7309730	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=exon:NA12877_ch_T0000451:6;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7309731	7316253	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=intron:NA12877_ch_T0000451:6;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316254	7316437	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=exon:NA12877_ch_T0000451:7;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7316438	7316817	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=intron:NA12877_ch_T0000451:7;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316818	7316960	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000451;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000451;transcript_name=NA12877_ch_T0000451;gene_name=TTTY16;ID=exon:NA12877_ch_T0000451:8;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7236297	7343444	1000	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000452;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000452;gene_name=TTTY16;ID=NA12877_ch_T0000452;Name=TTTY16
NA12877_chrY	CAT	exon	7236297	7237011	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000452;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000452;transcript_name=NA12877_ch_T0000452;gene_name=TTTY16;ID=exon:NA12877_ch_T0000452:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7237012	7316253	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000452;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000452;transcript_name=NA12877_ch_T0000452;gene_name=TTTY16;ID=intron:NA12877_ch_T0000452:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316254	7316440	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000452;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000452;transcript_name=NA12877_ch_T0000452;gene_name=TTTY16;ID=exon:NA12877_ch_T0000452:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7316441	7343330	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000452;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000452;transcript_name=NA12877_ch_T0000452;gene_name=TTTY16;ID=intron:NA12877_ch_T0000452:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7343331	7343444	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000452;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000452;transcript_name=NA12877_ch_T0000452;gene_name=TTTY16;ID=exon:NA12877_ch_T0000452:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7244600	7309923	1000	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000453;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000453;gene_name=TTTY16;ID=NA12877_ch_T0000453;Name=TTTY16
NA12877_chrY	CAT	exon	7244600	7244660	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000453;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000453;transcript_name=NA12877_ch_T0000453;gene_name=TTTY16;ID=exon:NA12877_ch_T0000453:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7244661	7250907	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000453;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000453;transcript_name=NA12877_ch_T0000453;gene_name=TTTY16;ID=intron:NA12877_ch_T0000453:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7250908	7251056	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000453;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000453;transcript_name=NA12877_ch_T0000453;gene_name=TTTY16;ID=exon:NA12877_ch_T0000453:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7251057	7252605	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000453;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000453;transcript_name=NA12877_ch_T0000453;gene_name=TTTY16;ID=intron:NA12877_ch_T0000453:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7252606	7252834	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000453;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000453;transcript_name=NA12877_ch_T0000453;gene_name=TTTY16;ID=exon:NA12877_ch_T0000453:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7252835	7309666	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000453;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000453;transcript_name=NA12877_ch_T0000453;gene_name=TTTY16;ID=intron:NA12877_ch_T0000453:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7309667	7309923	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000453;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000453;transcript_name=NA12877_ch_T0000453;gene_name=TTTY16;ID=exon:NA12877_ch_T0000453:3;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7282320	7343654	1000	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000455;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000455;gene_name=TTTY16;ID=NA12877_ch_T0000455;Name=TTTY16
NA12877_chrY	CAT	exon	7282320	7282760	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000455;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000455;transcript_name=NA12877_ch_T0000455;gene_name=TTTY16;ID=exon:NA12877_ch_T0000455:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7282761	7316253	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000455;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000455;transcript_name=NA12877_ch_T0000455;gene_name=TTTY16;ID=intron:NA12877_ch_T0000455:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316254	7316440	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000455;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000455;transcript_name=NA12877_ch_T0000455;gene_name=TTTY16;ID=exon:NA12877_ch_T0000455:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7316441	7343547	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000455;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000455;transcript_name=NA12877_ch_T0000455;gene_name=TTTY16;ID=intron:NA12877_ch_T0000455:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7343548	7343654	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000455;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000455;transcript_name=NA12877_ch_T0000455;gene_name=TTTY16;ID=exon:NA12877_ch_T0000455:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7282320	7348934	1000	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000456;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000456;gene_name=TTTY16;ID=NA12877_ch_T0000456;Name=TTTY16
NA12877_chrY	CAT	exon	7282320	7282760	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000456;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000456;transcript_name=NA12877_ch_T0000456;gene_name=TTTY16;ID=exon:NA12877_ch_T0000456:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7282761	7316253	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000456;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000456;transcript_name=NA12877_ch_T0000456;gene_name=TTTY16;ID=intron:NA12877_ch_T0000456:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316254	7316437	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000456;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000456;transcript_name=NA12877_ch_T0000456;gene_name=TTTY16;ID=exon:NA12877_ch_T0000456:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7316438	7348886	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000456;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000456;transcript_name=NA12877_ch_T0000456;gene_name=TTTY16;ID=intron:NA12877_ch_T0000456:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7348887	7348934	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000456;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000456;transcript_name=NA12877_ch_T0000456;gene_name=TTTY16;ID=exon:NA12877_ch_T0000456:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7282322	7343658	1000	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000457;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000457;gene_name=TTTY16;ID=NA12877_ch_T0000457;Name=TTTY16
NA12877_chrY	CAT	exon	7282322	7282760	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000457;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000457;transcript_name=NA12877_ch_T0000457;gene_name=TTTY16;ID=exon:NA12877_ch_T0000457:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7282761	7316253	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000457;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000457;transcript_name=NA12877_ch_T0000457;gene_name=TTTY16;ID=intron:NA12877_ch_T0000457:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316254	7316437	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000457;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000457;transcript_name=NA12877_ch_T0000457;gene_name=TTTY16;ID=exon:NA12877_ch_T0000457:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7316438	7343547	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000457;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000457;transcript_name=NA12877_ch_T0000457;gene_name=TTTY16;ID=intron:NA12877_ch_T0000457:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7343548	7343658	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000457;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000457;transcript_name=NA12877_ch_T0000457;gene_name=TTTY16;ID=exon:NA12877_ch_T0000457:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7282328	7309980	1000	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000458;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000458;gene_name=TTTY16;ID=NA12877_ch_T0000458;Name=TTTY16
NA12877_chrY	CAT	exon	7282328	7282760	.	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000458;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000458;transcript_name=NA12877_ch_T0000458;gene_name=TTTY16;ID=exon:NA12877_ch_T0000458:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7282761	7309666	.	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000458;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000458;transcript_name=NA12877_ch_T0000458;gene_name=TTTY16;ID=intron:NA12877_ch_T0000458:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7309667	7309980	.	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000458;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000458;transcript_name=NA12877_ch_T0000458;gene_name=TTTY16;ID=exon:NA12877_ch_T0000458:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7282328	7343585	1000	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000459;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000459;gene_name=TTTY16;ID=NA12877_ch_T0000459;Name=TTTY16
NA12877_chrY	CAT	exon	7282328	7282760	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000459;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000459;transcript_name=NA12877_ch_T0000459;gene_name=TTTY16;ID=exon:NA12877_ch_T0000459:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7282761	7309666	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000459;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000459;transcript_name=NA12877_ch_T0000459;gene_name=TTTY16;ID=intron:NA12877_ch_T0000459:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7309667	7309726	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000459;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000459;transcript_name=NA12877_ch_T0000459;gene_name=TTTY16;ID=exon:NA12877_ch_T0000459:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7309727	7316253	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000459;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000459;transcript_name=NA12877_ch_T0000459;gene_name=TTTY16;ID=intron:NA12877_ch_T0000459:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316254	7316437	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000459;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000459;transcript_name=NA12877_ch_T0000459;gene_name=TTTY16;ID=exon:NA12877_ch_T0000459:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7316438	7343547	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000459;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000459;transcript_name=NA12877_ch_T0000459;gene_name=TTTY16;ID=intron:NA12877_ch_T0000459:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7343548	7343585	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000459;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000459;transcript_name=NA12877_ch_T0000459;gene_name=TTTY16;ID=exon:NA12877_ch_T0000459:3;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7282328	7316974	1000	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000460;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000460;gene_name=TTTY16;ID=NA12877_ch_T0000460;Name=TTTY16
NA12877_chrY	CAT	exon	7282328	7282760	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000460;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000460;transcript_name=NA12877_ch_T0000460;gene_name=TTTY16;ID=exon:NA12877_ch_T0000460:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7282761	7316253	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000460;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000460;transcript_name=NA12877_ch_T0000460;gene_name=TTTY16;ID=intron:NA12877_ch_T0000460:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316254	7316437	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000460;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000460;transcript_name=NA12877_ch_T0000460;gene_name=TTTY16;ID=exon:NA12877_ch_T0000460:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7316438	7316817	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000460;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000460;transcript_name=NA12877_ch_T0000460;gene_name=TTTY16;ID=intron:NA12877_ch_T0000460:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316818	7316974	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000460;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000460;transcript_name=NA12877_ch_T0000460;gene_name=TTTY16;ID=exon:NA12877_ch_T0000460:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7282328	7343542	1000	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000461;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000461;gene_name=TTTY16;ID=NA12877_ch_T0000461;Name=TTTY16
NA12877_chrY	CAT	exon	7282328	7282760	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000461;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000461;transcript_name=NA12877_ch_T0000461;gene_name=TTTY16;ID=exon:NA12877_ch_T0000461:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7282761	7316253	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000461;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000461;transcript_name=NA12877_ch_T0000461;gene_name=TTTY16;ID=intron:NA12877_ch_T0000461:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316254	7316440	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000461;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000461;transcript_name=NA12877_ch_T0000461;gene_name=TTTY16;ID=exon:NA12877_ch_T0000461:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7316441	7343330	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000461;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000461;transcript_name=NA12877_ch_T0000461;gene_name=TTTY16;ID=intron:NA12877_ch_T0000461:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7343331	7343542	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000461;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000461;transcript_name=NA12877_ch_T0000461;gene_name=TTTY16;ID=exon:NA12877_ch_T0000461:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7282328	7348994	1000	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000462;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000462;gene_name=TTTY16;ID=NA12877_ch_T0000462;Name=TTTY16
NA12877_chrY	CAT	exon	7282328	7282760	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000462;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000462;transcript_name=NA12877_ch_T0000462;gene_name=TTTY16;ID=exon:NA12877_ch_T0000462:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7282761	7316253	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000462;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000462;transcript_name=NA12877_ch_T0000462;gene_name=TTTY16;ID=intron:NA12877_ch_T0000462:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316254	7316440	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000462;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000462;transcript_name=NA12877_ch_T0000462;gene_name=TTTY16;ID=exon:NA12877_ch_T0000462:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7316441	7316566	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000462;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000462;transcript_name=NA12877_ch_T0000462;gene_name=TTTY16;ID=intron:NA12877_ch_T0000462:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316567	7316761	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000462;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000462;transcript_name=NA12877_ch_T0000462;gene_name=TTTY16;ID=exon:NA12877_ch_T0000462:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7316762	7345227	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000462;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000462;transcript_name=NA12877_ch_T0000462;gene_name=TTTY16;ID=intron:NA12877_ch_T0000462:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7345228	7345337	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000462;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000462;transcript_name=NA12877_ch_T0000462;gene_name=TTTY16;ID=exon:NA12877_ch_T0000462:3;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7345338	7348886	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000462;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000462;transcript_name=NA12877_ch_T0000462;gene_name=TTTY16;ID=intron:NA12877_ch_T0000462:3;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7348887	7348994	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000462;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000462;transcript_name=NA12877_ch_T0000462;gene_name=TTTY16;ID=exon:NA12877_ch_T0000462:4;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7282332	7350038	1000	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000463;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_G0000123;transcript_name=NA12877_ch_T0000463;gene_name=TTTY16;ID=NA12877_ch_T0000463;Name=TTTY16
NA12877_chrY	CAT	exon	7282332	7282760	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000463;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000463;transcript_name=NA12877_ch_T0000463;gene_name=TTTY16;ID=exon:NA12877_ch_T0000463:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7282761	7316253	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000463;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000463;transcript_name=NA12877_ch_T0000463;gene_name=TTTY16;ID=intron:NA12877_ch_T0000463:0;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316254	7316437	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000463;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000463;transcript_name=NA12877_ch_T0000463;gene_name=TTTY16;ID=exon:NA12877_ch_T0000463:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7316438	7345227	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000463;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000463;transcript_name=NA12877_ch_T0000463;gene_name=TTTY16;ID=intron:NA12877_ch_T0000463:1;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7345228	7345337	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000463;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000463;transcript_name=NA12877_ch_T0000463;gene_name=TTTY16;ID=exon:NA12877_ch_T0000463:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7345338	7348886	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000463;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000463;transcript_name=NA12877_ch_T0000463;gene_name=TTTY16;ID=intron:NA12877_ch_T0000463:2;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7348887	7348975	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000463;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000463;transcript_name=NA12877_ch_T0000463;gene_name=TTTY16;ID=exon:NA12877_ch_T0000463:3;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7348976	7349211	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000463;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000463;transcript_name=NA12877_ch_T0000463;gene_name=TTTY16;ID=intron:NA12877_ch_T0000463:3;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7349212	7350038	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=NA12877_ch_T0000463;gene_id=NA12877_ch_G0000123;Parent=NA12877_ch_T0000463;transcript_name=NA12877_ch_T0000463;gene_name=TTTY16;ID=exon:NA12877_ch_T0000463:4;Name=TTTY16;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7252722	7316440	.	-	.	source_gene_common_name=RFTN1P1;source_gene=ENSG00000234795.11;gene_id=NA12877_ch_G0000124;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RFTN1P1;gene_sources=liftoff;ID=NA12877_ch_G0000124;Name=RFTN1P1
NA12877_chrY	CAT	transcript	7252722	7316440	1000	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=NA12877_ch_T0000454;gene_id=NA12877_ch_G0000124;Parent=NA12877_ch_G0000124;transcript_name=NA12877_ch_T0000454;gene_name=RFTN1P1;ID=NA12877_ch_T0000454;Name=RFTN1P1
NA12877_chrY	CAT	exon	7252722	7252834	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=NA12877_ch_T0000454;gene_id=NA12877_ch_G0000124;Parent=NA12877_ch_T0000454;transcript_name=NA12877_ch_T0000454;gene_name=RFTN1P1;ID=exon:NA12877_ch_T0000454:0;Name=RFTN1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7252835	7261592	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=NA12877_ch_T0000454;gene_id=NA12877_ch_G0000124;Parent=NA12877_ch_T0000454;transcript_name=NA12877_ch_T0000454;gene_name=RFTN1P1;ID=intron:NA12877_ch_T0000454:0;Name=RFTN1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7261593	7261795	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=NA12877_ch_T0000454;gene_id=NA12877_ch_G0000124;Parent=NA12877_ch_T0000454;transcript_name=NA12877_ch_T0000454;gene_name=RFTN1P1;ID=exon:NA12877_ch_T0000454:1;Name=RFTN1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7261796	7269193	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=NA12877_ch_T0000454;gene_id=NA12877_ch_G0000124;Parent=NA12877_ch_T0000454;transcript_name=NA12877_ch_T0000454;gene_name=RFTN1P1;ID=intron:NA12877_ch_T0000454:1;Name=RFTN1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7269194	7269577	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=NA12877_ch_T0000454;gene_id=NA12877_ch_G0000124;Parent=NA12877_ch_T0000454;transcript_name=NA12877_ch_T0000454;gene_name=RFTN1P1;ID=exon:NA12877_ch_T0000454:2;Name=RFTN1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7269578	7289095	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=NA12877_ch_T0000454;gene_id=NA12877_ch_G0000124;Parent=NA12877_ch_T0000454;transcript_name=NA12877_ch_T0000454;gene_name=RFTN1P1;ID=intron:NA12877_ch_T0000454:2;Name=RFTN1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7289096	7289204	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=NA12877_ch_T0000454;gene_id=NA12877_ch_G0000124;Parent=NA12877_ch_T0000454;transcript_name=NA12877_ch_T0000454;gene_name=RFTN1P1;ID=exon:NA12877_ch_T0000454:3;Name=RFTN1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7289205	7316253	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=NA12877_ch_T0000454;gene_id=NA12877_ch_G0000124;Parent=NA12877_ch_T0000454;transcript_name=NA12877_ch_T0000454;gene_name=RFTN1P1;ID=intron:NA12877_ch_T0000454:3;Name=RFTN1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7316254	7316440	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=NA12877_ch_T0000454;gene_id=NA12877_ch_G0000124;Parent=NA12877_ch_T0000454;transcript_name=NA12877_ch_T0000454;gene_name=RFTN1P1;ID=exon:NA12877_ch_T0000454:4;Name=RFTN1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7327068	7330759	.	+	.	source_gene_common_name=ENSG00000298447;source_gene=ENSG00000298447.1;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;gene_id=NA12877_ch_G0000125;gene_biotype=lncRNA;gene_name=ENSG00000298447;gene_sources=liftoff;ID=NA12877_ch_G0000125;Name=ENSG00000298447
NA12877_chrY	CAT	transcript	7327068	7330759	1000	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=NA12877_ch_T0000464;gene_id=NA12877_ch_G0000125;Parent=NA12877_ch_G0000125;transcript_name=NA12877_ch_T0000464;gene_name=ENSG00000298447;ID=NA12877_ch_T0000464;Name=ENSG00000298447
NA12877_chrY	CAT	exon	7327068	7327362	.	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=NA12877_ch_T0000464;gene_id=NA12877_ch_G0000125;Parent=NA12877_ch_T0000464;transcript_name=NA12877_ch_T0000464;gene_name=ENSG00000298447;ID=exon:NA12877_ch_T0000464:0;Name=ENSG00000298447;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7327363	7330012	.	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=NA12877_ch_T0000464;gene_id=NA12877_ch_G0000125;Parent=NA12877_ch_T0000464;transcript_name=NA12877_ch_T0000464;gene_name=ENSG00000298447;ID=intron:NA12877_ch_T0000464:0;Name=ENSG00000298447;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7330013	7330759	.	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=NA12877_ch_T0000464;gene_id=NA12877_ch_G0000125;Parent=NA12877_ch_T0000464;transcript_name=NA12877_ch_T0000464;gene_name=ENSG00000298447;ID=exon:NA12877_ch_T0000464:1;Name=ENSG00000298447;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7343729	7354417	.	+	.	source_gene_common_name=TTTY12;source_gene=ENSG00000237048.5;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;gene_id=NA12877_ch_G0000126;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=NA12877_ch_G0000126;Name=TTTY12
NA12877_chrY	CAT	transcript	7343729	7350416	1000	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=NA12877_ch_T0000465;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_G0000126;transcript_name=NA12877_ch_T0000465;gene_name=TTTY12;ID=NA12877_ch_T0000465;Name=TTTY12
NA12877_chrY	CAT	exon	7343729	7343795	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=NA12877_ch_T0000465;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000465;transcript_name=NA12877_ch_T0000465;gene_name=TTTY12;ID=exon:NA12877_ch_T0000465:0;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7343796	7344656	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=NA12877_ch_T0000465;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000465;transcript_name=NA12877_ch_T0000465;gene_name=TTTY12;ID=intron:NA12877_ch_T0000465:0;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7344657	7344812	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=NA12877_ch_T0000465;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000465;transcript_name=NA12877_ch_T0000465;gene_name=TTTY12;ID=exon:NA12877_ch_T0000465:1;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7344813	7349593	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=NA12877_ch_T0000465;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000465;transcript_name=NA12877_ch_T0000465;gene_name=TTTY12;ID=intron:NA12877_ch_T0000465:1;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7349594	7350416	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=NA12877_ch_T0000465;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000465;transcript_name=NA12877_ch_T0000465;gene_name=TTTY12;ID=exon:NA12877_ch_T0000465:2;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7343734	7350416	1000	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=NA12877_ch_T0000466;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_G0000126;transcript_name=NA12877_ch_T0000466;gene_name=TTTY12;ID=NA12877_ch_T0000466;Name=TTTY12
NA12877_chrY	CAT	exon	7343734	7343795	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=NA12877_ch_T0000466;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000466;transcript_name=NA12877_ch_T0000466;gene_name=TTTY12;ID=exon:NA12877_ch_T0000466:0;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7343796	7344656	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=NA12877_ch_T0000466;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000466;transcript_name=NA12877_ch_T0000466;gene_name=TTTY12;ID=intron:NA12877_ch_T0000466:0;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7344657	7344812	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=NA12877_ch_T0000466;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000466;transcript_name=NA12877_ch_T0000466;gene_name=TTTY12;ID=exon:NA12877_ch_T0000466:1;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7344813	7345276	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=NA12877_ch_T0000466;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000466;transcript_name=NA12877_ch_T0000466;gene_name=TTTY12;ID=intron:NA12877_ch_T0000466:1;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7345277	7345358	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=NA12877_ch_T0000466;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000466;transcript_name=NA12877_ch_T0000466;gene_name=TTTY12;ID=exon:NA12877_ch_T0000466:2;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7345359	7349593	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=NA12877_ch_T0000466;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000466;transcript_name=NA12877_ch_T0000466;gene_name=TTTY12;ID=intron:NA12877_ch_T0000466:2;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7349594	7350416	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=NA12877_ch_T0000466;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000466;transcript_name=NA12877_ch_T0000466;gene_name=TTTY12;ID=exon:NA12877_ch_T0000466:3;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7343734	7354417	1000	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=NA12877_ch_T0000467;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_G0000126;transcript_name=NA12877_ch_T0000467;gene_name=TTTY12;ID=NA12877_ch_T0000467;Name=TTTY12
NA12877_chrY	CAT	exon	7343734	7343795	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=NA12877_ch_T0000467;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000467;transcript_name=NA12877_ch_T0000467;gene_name=TTTY12;ID=exon:NA12877_ch_T0000467:0;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7343796	7344656	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=NA12877_ch_T0000467;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000467;transcript_name=NA12877_ch_T0000467;gene_name=TTTY12;ID=intron:NA12877_ch_T0000467:0;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7344657	7344812	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=NA12877_ch_T0000467;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000467;transcript_name=NA12877_ch_T0000467;gene_name=TTTY12;ID=exon:NA12877_ch_T0000467:1;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7344813	7354311	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=NA12877_ch_T0000467;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000467;transcript_name=NA12877_ch_T0000467;gene_name=TTTY12;ID=intron:NA12877_ch_T0000467:1;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7354312	7354417	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=NA12877_ch_T0000467;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000467;transcript_name=NA12877_ch_T0000467;gene_name=TTTY12;ID=exon:NA12877_ch_T0000467:2;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7344655	7350416	1000	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=NA12877_ch_T0000468;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_G0000126;transcript_name=NA12877_ch_T0000468;gene_name=TTTY12;ID=NA12877_ch_T0000468;Name=TTTY12
NA12877_chrY	CAT	exon	7344655	7344812	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=NA12877_ch_T0000468;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000468;transcript_name=NA12877_ch_T0000468;gene_name=TTTY12;ID=exon:NA12877_ch_T0000468:0;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7344813	7345276	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=NA12877_ch_T0000468;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000468;transcript_name=NA12877_ch_T0000468;gene_name=TTTY12;ID=intron:NA12877_ch_T0000468:0;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7345277	7345358	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=NA12877_ch_T0000468;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000468;transcript_name=NA12877_ch_T0000468;gene_name=TTTY12;ID=exon:NA12877_ch_T0000468:1;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7345359	7350264	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=NA12877_ch_T0000468;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000468;transcript_name=NA12877_ch_T0000468;gene_name=TTTY12;ID=intron:NA12877_ch_T0000468:1;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7350265	7350416	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=NA12877_ch_T0000468;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000468;transcript_name=NA12877_ch_T0000468;gene_name=TTTY12;ID=exon:NA12877_ch_T0000468:2;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7347546	7350416	1000	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=NA12877_ch_T0000469;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_G0000126;transcript_name=NA12877_ch_T0000469;gene_name=TTTY12;ID=NA12877_ch_T0000469;Name=TTTY12
NA12877_chrY	CAT	exon	7347546	7347588	.	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=NA12877_ch_T0000469;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000469;transcript_name=NA12877_ch_T0000469;gene_name=TTTY12;ID=exon:NA12877_ch_T0000469:0;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7347589	7349593	.	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=NA12877_ch_T0000469;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000469;transcript_name=NA12877_ch_T0000469;gene_name=TTTY12;ID=intron:NA12877_ch_T0000469:0;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7349594	7350416	.	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=NA12877_ch_T0000469;gene_id=NA12877_ch_G0000126;Parent=NA12877_ch_T0000469;transcript_name=NA12877_ch_T0000469;gene_name=TTTY12;ID=exon:NA12877_ch_T0000469:1;Name=TTTY12;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7370652	7371260	.	+	.	source_gene_common_name=ENSG00000310556;source_gene=ENSG00000310556.1;gene_id=NA12877_ch_G0000127;gene_biotype=lncRNA;gene_name=ENSG00000310556;gene_sources=liftoff;ID=NA12877_ch_G0000127;Name=ENSG00000310556
NA12877_chrY	CAT	transcript	7370652	7371260	1000	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;transcript_id=NA12877_ch_T0000470;gene_id=NA12877_ch_G0000127;Parent=NA12877_ch_G0000127;transcript_name=NA12877_ch_T0000470;gene_name=ENSG00000310556;ID=NA12877_ch_T0000470;Name=ENSG00000310556
NA12877_chrY	CAT	exon	7370652	7371260	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;transcript_id=NA12877_ch_T0000470;gene_id=NA12877_ch_G0000127;Parent=NA12877_ch_T0000470;transcript_name=NA12877_ch_T0000470;gene_name=ENSG00000310556;ID=exon:NA12877_ch_T0000470:0;Name=ENSG00000310556;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7385218	7386187	.	-	.	source_gene_common_name=ENSG00000278854;source_gene=ENSG00000278854.1;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;gene_id=NA12877_ch_G0000128;gene_biotype=processed_pseudogene;gene_name=ENSG00000278854;gene_sources=liftoff;ID=NA12877_ch_G0000128;Name=ENSG00000278854
NA12877_chrY	CAT	transcript	7385218	7386187	1000	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=NA12877_ch_T0000471;gene_id=NA12877_ch_G0000128;Parent=NA12877_ch_G0000128;transcript_name=NA12877_ch_T0000471;gene_name=ENSG00000278854;ID=NA12877_ch_T0000471;Name=ENSG00000278854
NA12877_chrY	CAT	exon	7385218	7385614	.	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=NA12877_ch_T0000471;gene_id=NA12877_ch_G0000128;Parent=NA12877_ch_T0000471;transcript_name=NA12877_ch_T0000471;gene_name=ENSG00000278854;ID=exon:NA12877_ch_T0000471:0;Name=ENSG00000278854;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7385615	7385913	.	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=NA12877_ch_T0000471;gene_id=NA12877_ch_G0000128;Parent=NA12877_ch_T0000471;transcript_name=NA12877_ch_T0000471;gene_name=ENSG00000278854;ID=intron:NA12877_ch_T0000471:0;Name=ENSG00000278854;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7385914	7386187	.	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=NA12877_ch_T0000471;gene_id=NA12877_ch_G0000128;Parent=NA12877_ch_T0000471;transcript_name=NA12877_ch_T0000471;gene_name=ENSG00000278854;ID=exon:NA12877_ch_T0000471:1;Name=ENSG00000278854;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7393419	7394609	.	-	.	source_gene_common_name=ZNF92P1Y;source_gene=ENSG00000215603.4;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;gene_id=NA12877_ch_G0000129;gene_biotype=processed_pseudogene;gene_name=ZNF92P1Y;gene_sources=liftoff;ID=NA12877_ch_G0000129;Name=ZNF92P1Y
NA12877_chrY	CAT	transcript	7393419	7394609	1000	-	.	source_transcript=ENST00000415010.1;source_transcript_name=ZNF92P1Y-201;source_gene=ENSG00000215603.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215603.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415010.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF92P1Y;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;transcript_id=NA12877_ch_T0000472;gene_id=NA12877_ch_G0000129;Parent=NA12877_ch_G0000129;transcript_name=NA12877_ch_T0000472;gene_name=ZNF92P1Y;ID=NA12877_ch_T0000472;Name=ZNF92P1Y
NA12877_chrY	CAT	exon	7393419	7394609	.	-	.	source_transcript=ENST00000415010.1;source_transcript_name=ZNF92P1Y-201;source_gene=ENSG00000215603.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215603.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415010.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF92P1Y;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;transcript_id=NA12877_ch_T0000472;gene_id=NA12877_ch_G0000129;Parent=NA12877_ch_T0000472;transcript_name=NA12877_ch_T0000472;gene_name=ZNF92P1Y;ID=exon:NA12877_ch_T0000472:0;Name=ZNF92P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7445273	7447040	.	-	.	source_gene_common_name=ENSG00000273863;source_gene=ENSG00000273863.1;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;gene_id=NA12877_ch_G0000130;gene_biotype=processed_pseudogene;gene_name=ENSG00000273863;gene_sources=liftoff;ID=NA12877_ch_G0000130;Name=ENSG00000273863
NA12877_chrY	CAT	transcript	7445273	7447040	1000	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=NA12877_ch_T0000473;gene_id=NA12877_ch_G0000130;Parent=NA12877_ch_G0000130;transcript_name=NA12877_ch_T0000473;gene_name=ENSG00000273863;ID=NA12877_ch_T0000473;Name=ENSG00000273863
NA12877_chrY	CAT	exon	7445273	7445795	.	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=NA12877_ch_T0000473;gene_id=NA12877_ch_G0000130;Parent=NA12877_ch_T0000473;transcript_name=NA12877_ch_T0000473;gene_name=ENSG00000273863;ID=exon:NA12877_ch_T0000473:0;Name=ENSG00000273863;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7445796	7446850	.	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=NA12877_ch_T0000473;gene_id=NA12877_ch_G0000130;Parent=NA12877_ch_T0000473;transcript_name=NA12877_ch_T0000473;gene_name=ENSG00000273863;ID=intron:NA12877_ch_T0000473:0;Name=ENSG00000273863;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7446851	7447040	.	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=NA12877_ch_T0000473;gene_id=NA12877_ch_G0000130;Parent=NA12877_ch_T0000473;transcript_name=NA12877_ch_T0000473;gene_name=ENSG00000273863;ID=exon:NA12877_ch_T0000473:1;Name=ENSG00000273863;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7453159	7453827	.	-	.	source_gene_common_name=ZNF736P8Y;source_gene=ENSG00000244246.1;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;gene_id=NA12877_ch_G0000131;gene_biotype=processed_pseudogene;gene_name=ZNF736P8Y;gene_sources=liftoff;ID=NA12877_ch_G0000131;Name=ZNF736P8Y
NA12877_chrY	CAT	transcript	7453159	7453827	1000	-	.	source_transcript=ENST00000451913.1;source_transcript_name=ZNF736P8Y-201;source_gene=ENSG00000244246.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244246.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451913.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P8Y;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;transcript_id=NA12877_ch_T0000474;gene_id=NA12877_ch_G0000131;Parent=NA12877_ch_G0000131;transcript_name=NA12877_ch_T0000474;gene_name=ZNF736P8Y;ID=NA12877_ch_T0000474;Name=ZNF736P8Y
NA12877_chrY	CAT	exon	7453159	7453827	.	-	.	source_transcript=ENST00000451913.1;source_transcript_name=ZNF736P8Y-201;source_gene=ENSG00000244246.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244246.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P8Y;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;transcript_id=NA12877_ch_T0000474;gene_id=NA12877_ch_G0000131;Parent=NA12877_ch_T0000474;transcript_name=NA12877_ch_T0000474;gene_name=ZNF736P8Y;ID=exon:NA12877_ch_T0000474:0;Name=ZNF736P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7472734	7477377	.	-	.	source_gene_common_name=BPY2DP;source_gene=ENSG00000229745.1;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;gene_id=NA12877_ch_G0000132;gene_biotype=unprocessed_pseudogene;gene_name=BPY2DP;gene_sources=liftoff;ID=NA12877_ch_G0000132;Name=BPY2DP
NA12877_chrY	CAT	transcript	7472734	7477377	1000	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=NA12877_ch_T0000475;gene_id=NA12877_ch_G0000132;Parent=NA12877_ch_G0000132;transcript_name=NA12877_ch_T0000475;gene_name=BPY2DP;ID=NA12877_ch_T0000475;Name=BPY2DP
NA12877_chrY	CAT	exon	7472734	7472752	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=NA12877_ch_T0000475;gene_id=NA12877_ch_G0000132;Parent=NA12877_ch_T0000475;transcript_name=NA12877_ch_T0000475;gene_name=BPY2DP;ID=exon:NA12877_ch_T0000475:0;Name=BPY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7472753	7473430	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=NA12877_ch_T0000475;gene_id=NA12877_ch_G0000132;Parent=NA12877_ch_T0000475;transcript_name=NA12877_ch_T0000475;gene_name=BPY2DP;ID=intron:NA12877_ch_T0000475:0;Name=BPY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7473431	7473536	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=NA12877_ch_T0000475;gene_id=NA12877_ch_G0000132;Parent=NA12877_ch_T0000475;transcript_name=NA12877_ch_T0000475;gene_name=BPY2DP;ID=exon:NA12877_ch_T0000475:1;Name=BPY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7473537	7476371	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=NA12877_ch_T0000475;gene_id=NA12877_ch_G0000132;Parent=NA12877_ch_T0000475;transcript_name=NA12877_ch_T0000475;gene_name=BPY2DP;ID=intron:NA12877_ch_T0000475:1;Name=BPY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7476372	7476441	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=NA12877_ch_T0000475;gene_id=NA12877_ch_G0000132;Parent=NA12877_ch_T0000475;transcript_name=NA12877_ch_T0000475;gene_name=BPY2DP;ID=exon:NA12877_ch_T0000475:2;Name=BPY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7476442	7477307	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=NA12877_ch_T0000475;gene_id=NA12877_ch_G0000132;Parent=NA12877_ch_T0000475;transcript_name=NA12877_ch_T0000475;gene_name=BPY2DP;ID=intron:NA12877_ch_T0000475:2;Name=BPY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7477308	7477377	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=NA12877_ch_T0000475;gene_id=NA12877_ch_G0000132;Parent=NA12877_ch_T0000475;transcript_name=NA12877_ch_T0000475;gene_name=BPY2DP;ID=exon:NA12877_ch_T0000475:3;Name=BPY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7530724	7531543	.	-	.	source_gene_common_name=ZNF736P7Y;source_gene=ENSG00000241200.1;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;gene_id=NA12877_ch_G0000133;gene_biotype=processed_pseudogene;gene_name=ZNF736P7Y;gene_sources=liftoff;ID=NA12877_ch_G0000133;Name=ZNF736P7Y
NA12877_chrY	CAT	transcript	7530724	7531543	1000	-	.	source_transcript=ENST00000425158.1;source_transcript_name=ZNF736P7Y-201;source_gene=ENSG00000241200.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000241200.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425158.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P7Y;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;transcript_id=NA12877_ch_T0000476;gene_id=NA12877_ch_G0000133;Parent=NA12877_ch_G0000133;transcript_name=NA12877_ch_T0000476;gene_name=ZNF736P7Y;ID=NA12877_ch_T0000476;Name=ZNF736P7Y
NA12877_chrY	CAT	exon	7530724	7531543	.	-	.	source_transcript=ENST00000425158.1;source_transcript_name=ZNF736P7Y-201;source_gene=ENSG00000241200.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000241200.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P7Y;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;transcript_id=NA12877_ch_T0000476;gene_id=NA12877_ch_G0000133;Parent=NA12877_ch_T0000476;transcript_name=NA12877_ch_T0000476;gene_name=ZNF736P7Y;ID=exon:NA12877_ch_T0000476:0;Name=ZNF736P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7608188	7666035	.	-	.	source_gene_common_name=ENSG00000293305;source_gene=ENSG00000293305.2;gene_id=NA12877_ch_G0000134;gene_biotype=lncRNA;gene_name=ENSG00000293305;gene_sources=liftoff;ID=NA12877_ch_G0000134;Name=ENSG00000293305
NA12877_chrY	CAT	transcript	7608188	7666035	1000	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000477;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_G0000134;transcript_name=NA12877_ch_T0000477;gene_name=ENSG00000293305;ID=NA12877_ch_T0000477;Name=ENSG00000293305
NA12877_chrY	CAT	exon	7608188	7609860	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000477;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000477;transcript_name=NA12877_ch_T0000477;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000477:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7609861	7616731	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000477;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000477;transcript_name=NA12877_ch_T0000477;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000477:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7616732	7616916	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000477;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000477;transcript_name=NA12877_ch_T0000477;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000477:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7616917	7651591	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000477;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000477;transcript_name=NA12877_ch_T0000477;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000477:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7651592	7651706	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000477;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000477;transcript_name=NA12877_ch_T0000477;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000477:2;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7651707	7665825	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000477;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000477;transcript_name=NA12877_ch_T0000477;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000477:2;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7665826	7666035	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000477;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000477;transcript_name=NA12877_ch_T0000477;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000477:3;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7609615	7666034	1000	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000479;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_G0000134;transcript_name=NA12877_ch_T0000479;gene_name=ENSG00000293305;ID=NA12877_ch_T0000479;Name=ENSG00000293305
NA12877_chrY	CAT	exon	7609615	7609860	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000479;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000479;transcript_name=NA12877_ch_T0000479;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000479:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7609861	7651591	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000479;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000479;transcript_name=NA12877_ch_T0000479;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000479:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7651592	7651706	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000479;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000479;transcript_name=NA12877_ch_T0000479;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000479:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7651707	7665799	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000479;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000479;transcript_name=NA12877_ch_T0000479;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000479:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7665800	7666034	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000479;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000479;transcript_name=NA12877_ch_T0000479;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000479:2;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7609620	7665985	1000	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000480;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_G0000134;transcript_name=NA12877_ch_T0000480;gene_name=ENSG00000293305;ID=NA12877_ch_T0000480;Name=ENSG00000293305
NA12877_chrY	CAT	exon	7609620	7609860	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000480;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000480;transcript_name=NA12877_ch_T0000480;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000480:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7609861	7616731	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000480;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000480;transcript_name=NA12877_ch_T0000480;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000480:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7616732	7616916	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000480;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000480;transcript_name=NA12877_ch_T0000480;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000480:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7616917	7665799	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000480;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000480;transcript_name=NA12877_ch_T0000480;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000480:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7665800	7665985	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000480;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000480;transcript_name=NA12877_ch_T0000480;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000480:2;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7609620	7666023	1000	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000481;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_G0000134;transcript_name=NA12877_ch_T0000481;gene_name=ENSG00000293305;ID=NA12877_ch_T0000481;Name=ENSG00000293305
NA12877_chrY	CAT	exon	7609620	7609860	.	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000481;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000481;transcript_name=NA12877_ch_T0000481;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000481:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7609861	7665799	.	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000481;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000481;transcript_name=NA12877_ch_T0000481;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000481:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7665800	7666023	.	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000481;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000481;transcript_name=NA12877_ch_T0000481;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000481:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7609620	7631813	1000	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000482;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_G0000134;transcript_name=NA12877_ch_T0000482;gene_name=ENSG00000293305;ID=NA12877_ch_T0000482;Name=ENSG00000293305
NA12877_chrY	CAT	exon	7609620	7609860	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000482;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000482;transcript_name=NA12877_ch_T0000482;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000482:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7609861	7616793	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000482;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000482;transcript_name=NA12877_ch_T0000482;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000482:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7616794	7616916	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000482;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000482;transcript_name=NA12877_ch_T0000482;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000482:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7616917	7631774	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000482;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000482;transcript_name=NA12877_ch_T0000482;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000482:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7631775	7631813	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000482;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000482;transcript_name=NA12877_ch_T0000482;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000482:2;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7609620	7666076	1000	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000483;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_G0000134;transcript_name=NA12877_ch_T0000483;gene_name=ENSG00000293305;ID=NA12877_ch_T0000483;Name=ENSG00000293305
NA12877_chrY	CAT	exon	7609620	7609860	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000483;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000483;transcript_name=NA12877_ch_T0000483;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000483:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7609861	7616731	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000483;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000483;transcript_name=NA12877_ch_T0000483;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000483:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7616732	7616916	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000483;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000483;transcript_name=NA12877_ch_T0000483;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000483:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7616917	7651591	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000483;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000483;transcript_name=NA12877_ch_T0000483;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000483:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7651592	7651706	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000483;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000483;transcript_name=NA12877_ch_T0000483;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000483:2;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7651707	7665799	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000483;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000483;transcript_name=NA12877_ch_T0000483;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000483:2;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7665800	7666076	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000483;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000483;transcript_name=NA12877_ch_T0000483;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000483:3;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7609623	7631811	1000	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000484;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_G0000134;transcript_name=NA12877_ch_T0000484;gene_name=ENSG00000293305;ID=NA12877_ch_T0000484;Name=ENSG00000293305
NA12877_chrY	CAT	exon	7609623	7609860	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000484;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000484;transcript_name=NA12877_ch_T0000484;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000484:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7609861	7616731	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000484;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000484;transcript_name=NA12877_ch_T0000484;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000484:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7616732	7616916	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000484;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000484;transcript_name=NA12877_ch_T0000484;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000484:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7616917	7631774	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000484;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000484;transcript_name=NA12877_ch_T0000484;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000484:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7631775	7631811	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000484;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000484;transcript_name=NA12877_ch_T0000484;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000484:2;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7609624	7665985	1000	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000485;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_G0000134;transcript_name=NA12877_ch_T0000485;gene_name=ENSG00000293305;ID=NA12877_ch_T0000485;Name=ENSG00000293305
NA12877_chrY	CAT	exon	7609624	7609860	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000485;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000485;transcript_name=NA12877_ch_T0000485;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000485:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7609861	7616793	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000485;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000485;transcript_name=NA12877_ch_T0000485;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000485:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7616794	7616916	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000485;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000485;transcript_name=NA12877_ch_T0000485;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000485:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7616917	7665799	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000485;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000485;transcript_name=NA12877_ch_T0000485;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000485:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7665800	7665985	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000485;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000485;transcript_name=NA12877_ch_T0000485;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000485:2;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7609624	7631867	1000	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000486;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_G0000134;transcript_name=NA12877_ch_T0000486;gene_name=ENSG00000293305;ID=NA12877_ch_T0000486;Name=ENSG00000293305
NA12877_chrY	CAT	exon	7609624	7609860	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000486;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000486;transcript_name=NA12877_ch_T0000486;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000486:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7609861	7616731	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000486;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000486;transcript_name=NA12877_ch_T0000486;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000486:0;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7616732	7616916	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000486;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000486;transcript_name=NA12877_ch_T0000486;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000486:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7616917	7631339	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000486;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000486;transcript_name=NA12877_ch_T0000486;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000486:1;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7631340	7631490	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000486;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000486;transcript_name=NA12877_ch_T0000486;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000486:2;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7631491	7631774	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000486;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000486;transcript_name=NA12877_ch_T0000486;gene_name=ENSG00000293305;ID=intron:NA12877_ch_T0000486:2;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7631775	7631867	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=NA12877_ch_T0000486;gene_id=NA12877_ch_G0000134;Parent=NA12877_ch_T0000486;transcript_name=NA12877_ch_T0000486;gene_name=ENSG00000293305;ID=exon:NA12877_ch_T0000486:3;Name=ENSG00000293305;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7608639	7610466	.	-	.	source_gene_common_name=ZNF736P9Y;source_gene=ENSG00000239893.4;gene_id=NA12877_ch_G0000135;gene_biotype=transcribed_processed_pseudogene;gene_name=ZNF736P9Y;gene_sources=liftoff;ID=NA12877_ch_G0000135;Name=ZNF736P9Y
NA12877_chrY	CAT	transcript	7608639	7610466	1000	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=NA12877_ch_T0000478;gene_id=NA12877_ch_G0000135;Parent=NA12877_ch_G0000135;transcript_name=NA12877_ch_T0000478;gene_name=ZNF736P9Y;ID=NA12877_ch_T0000478;Name=ZNF736P9Y
NA12877_chrY	CAT	exon	7608639	7609861	.	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=NA12877_ch_T0000478;gene_id=NA12877_ch_G0000135;Parent=NA12877_ch_T0000478;transcript_name=NA12877_ch_T0000478;gene_name=ZNF736P9Y;ID=exon:NA12877_ch_T0000478:0;Name=ZNF736P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7609862	7610344	.	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=NA12877_ch_T0000478;gene_id=NA12877_ch_G0000135;Parent=NA12877_ch_T0000478;transcript_name=NA12877_ch_T0000478;gene_name=ZNF736P9Y;ID=intron:NA12877_ch_T0000478:0;Name=ZNF736P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7610345	7610466	.	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=NA12877_ch_T0000478;gene_id=NA12877_ch_G0000135;Parent=NA12877_ch_T0000478;transcript_name=NA12877_ch_T0000478;gene_name=ZNF736P9Y;ID=exon:NA12877_ch_T0000478:1;Name=ZNF736P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7666872	7683945	.	+	.	source_gene_common_name=RBMY2JP;source_gene=ENSG00000227204.1;gene_id=NA12877_ch_G0000136;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2JP;gene_sources=liftoff;ID=NA12877_ch_G0000136;Name=RBMY2JP
NA12877_chrY	CAT	transcript	7666872	7683945	1000	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_G0000136;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=NA12877_ch_T0000487;Name=RBMY2JP
NA12877_chrY	CAT	exon	7666872	7666980	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=exon:NA12877_ch_T0000487:0;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7666981	7668974	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=intron:NA12877_ch_T0000487:0;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7668975	7668977	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=exon:NA12877_ch_T0000487:1;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7668978	7671389	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=intron:NA12877_ch_T0000487:1;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7671390	7671567	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=exon:NA12877_ch_T0000487:2;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7671568	7673426	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=intron:NA12877_ch_T0000487:2;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7673427	7673542	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=exon:NA12877_ch_T0000487:3;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7673543	7673867	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=intron:NA12877_ch_T0000487:3;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7673868	7673904	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=exon:NA12877_ch_T0000487:4;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7673905	7681967	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=intron:NA12877_ch_T0000487:4;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7681968	7682080	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=exon:NA12877_ch_T0000487:5;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7682081	7682949	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=intron:NA12877_ch_T0000487:5;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7682950	7683056	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=exon:NA12877_ch_T0000487:6;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7683057	7683135	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=intron:NA12877_ch_T0000487:6;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7683136	7683229	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=exon:NA12877_ch_T0000487:7;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7683230	7683643	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=intron:NA12877_ch_T0000487:7;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7683644	7683945	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=NA12877_ch_T0000487;gene_id=NA12877_ch_G0000136;Parent=NA12877_ch_T0000487;transcript_name=NA12877_ch_T0000487;gene_name=RBMY2JP;ID=exon:NA12877_ch_T0000487:8;Name=RBMY2JP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7668181	7683456	.	+	.	source_gene_common_name=ENSG00000299821;source_gene=ENSG00000299821.1;gene_id=NA12877_ch_G0000137;gene_biotype=lncRNA;gene_name=ENSG00000299821;gene_sources=liftoff;ID=NA12877_ch_G0000137;Name=ENSG00000299821
NA12877_chrY	CAT	transcript	7668181	7683456	1000	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=NA12877_ch_T0000488;gene_id=NA12877_ch_G0000137;Parent=NA12877_ch_G0000137;transcript_name=NA12877_ch_T0000488;gene_name=ENSG00000299821;ID=NA12877_ch_T0000488;Name=ENSG00000299821
NA12877_chrY	CAT	exon	7668181	7668830	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=NA12877_ch_T0000488;gene_id=NA12877_ch_G0000137;Parent=NA12877_ch_T0000488;transcript_name=NA12877_ch_T0000488;gene_name=ENSG00000299821;ID=exon:NA12877_ch_T0000488:0;Name=ENSG00000299821;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7668831	7680541	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=NA12877_ch_T0000488;gene_id=NA12877_ch_G0000137;Parent=NA12877_ch_T0000488;transcript_name=NA12877_ch_T0000488;gene_name=ENSG00000299821;ID=intron:NA12877_ch_T0000488:0;Name=ENSG00000299821;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7680542	7680702	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=NA12877_ch_T0000488;gene_id=NA12877_ch_G0000137;Parent=NA12877_ch_T0000488;transcript_name=NA12877_ch_T0000488;gene_name=ENSG00000299821;ID=exon:NA12877_ch_T0000488:1;Name=ENSG00000299821;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7680703	7683140	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=NA12877_ch_T0000488;gene_id=NA12877_ch_G0000137;Parent=NA12877_ch_T0000488;transcript_name=NA12877_ch_T0000488;gene_name=ENSG00000299821;ID=intron:NA12877_ch_T0000488:1;Name=ENSG00000299821;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7683141	7683456	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=NA12877_ch_T0000488;gene_id=NA12877_ch_G0000137;Parent=NA12877_ch_T0000488;transcript_name=NA12877_ch_T0000488;gene_name=ENSG00000299821;ID=exon:NA12877_ch_T0000488:2;Name=ENSG00000299821;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7681923	7691398	.	-	.	source_gene_common_name=ENSG00000299844;source_gene=ENSG00000299844.1;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;gene_id=NA12877_ch_G0000138;gene_biotype=lncRNA;gene_name=ENSG00000299844;gene_sources=liftoff;ID=NA12877_ch_G0000138;Name=ENSG00000299844
NA12877_chrY	CAT	transcript	7681923	7691398	1000	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=NA12877_ch_T0000489;gene_id=NA12877_ch_G0000138;Parent=NA12877_ch_G0000138;transcript_name=NA12877_ch_T0000489;gene_name=ENSG00000299844;ID=NA12877_ch_T0000489;Name=ENSG00000299844
NA12877_chrY	CAT	exon	7681923	7682070	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=NA12877_ch_T0000489;gene_id=NA12877_ch_G0000138;Parent=NA12877_ch_T0000489;transcript_name=NA12877_ch_T0000489;gene_name=ENSG00000299844;ID=exon:NA12877_ch_T0000489:0;Name=ENSG00000299844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7682071	7683970	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=NA12877_ch_T0000489;gene_id=NA12877_ch_G0000138;Parent=NA12877_ch_T0000489;transcript_name=NA12877_ch_T0000489;gene_name=ENSG00000299844;ID=intron:NA12877_ch_T0000489:0;Name=ENSG00000299844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7683971	7684078	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=NA12877_ch_T0000489;gene_id=NA12877_ch_G0000138;Parent=NA12877_ch_T0000489;transcript_name=NA12877_ch_T0000489;gene_name=ENSG00000299844;ID=exon:NA12877_ch_T0000489:1;Name=ENSG00000299844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7684079	7691333	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=NA12877_ch_T0000489;gene_id=NA12877_ch_G0000138;Parent=NA12877_ch_T0000489;transcript_name=NA12877_ch_T0000489;gene_name=ENSG00000299844;ID=intron:NA12877_ch_T0000489:1;Name=ENSG00000299844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7691334	7691398	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=NA12877_ch_T0000489;gene_id=NA12877_ch_G0000138;Parent=NA12877_ch_T0000489;transcript_name=NA12877_ch_T0000489;gene_name=ENSG00000299844;ID=exon:NA12877_ch_T0000489:2;Name=ENSG00000299844;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7804200	7816939	.	-	.	source_gene_common_name=RBMY2KP;source_gene=ENSG00000225809.1;alternative_source_transcripts=ENST00000418221.1;gene_id=NA12877_ch_G0000139;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2KP;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000139;Name=RBMY2KP
NA12877_chrY	CAT	transcript	7804200	7816939	1000	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=NA12877_ch_T0000490;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_G0000139;transcript_name=NA12877_ch_T0000490;gene_name=RBMY2KP;ID=NA12877_ch_T0000490;Name=RBMY2KP
NA12877_chrY	CAT	exon	7804200	7804516	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=NA12877_ch_T0000490;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000490;transcript_name=NA12877_ch_T0000490;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000490:0;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7804517	7804925	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=NA12877_ch_T0000490;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000490;transcript_name=NA12877_ch_T0000490;gene_name=RBMY2KP;ID=intron:NA12877_ch_T0000490:0;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7804926	7805195	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=NA12877_ch_T0000490;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000490;transcript_name=NA12877_ch_T0000490;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000490:1;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7805196	7806065	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=NA12877_ch_T0000490;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000490;transcript_name=NA12877_ch_T0000490;gene_name=RBMY2KP;ID=intron:NA12877_ch_T0000490:1;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7806066	7806180	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=NA12877_ch_T0000490;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000490;transcript_name=NA12877_ch_T0000490;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000490:2;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7806181	7811030	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=NA12877_ch_T0000490;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000490;transcript_name=NA12877_ch_T0000490;gene_name=RBMY2KP;ID=intron:NA12877_ch_T0000490:2;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7811031	7811180	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=NA12877_ch_T0000490;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000490;transcript_name=NA12877_ch_T0000490;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000490:3;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7811181	7816304	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=NA12877_ch_T0000490;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000490;transcript_name=NA12877_ch_T0000490;gene_name=RBMY2KP;ID=intron:NA12877_ch_T0000490:3;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7816305	7816407	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=NA12877_ch_T0000490;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000490;transcript_name=NA12877_ch_T0000490;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000490:4;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7816408	7816831	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=NA12877_ch_T0000490;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000490;transcript_name=NA12877_ch_T0000490;gene_name=RBMY2KP;ID=intron:NA12877_ch_T0000490:4;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7816832	7816939	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=NA12877_ch_T0000490;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000490;transcript_name=NA12877_ch_T0000490;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000490:5;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7804200	7816939	1000	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_G0000139;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=NA12877_ch_T0000491;Name=RBMY2KP
NA12877_chrY	CAT	exon	7804200	7804516	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000491:0;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7804517	7804925	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=intron:NA12877_ch_T0000491:0;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7804926	7805013	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000491:1;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7805014	7805084	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=intron:NA12877_ch_T0000491:1;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7805085	7805195	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000491:2;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7805196	7806065	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=intron:NA12877_ch_T0000491:2;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7806066	7806180	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000491:3;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7806181	7811030	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=intron:NA12877_ch_T0000491:3;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7811031	7811180	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000491:4;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7811181	7816304	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=intron:NA12877_ch_T0000491:4;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7816305	7816407	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000491:5;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7816408	7816831	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=intron:NA12877_ch_T0000491:5;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7816832	7816939	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=NA12877_ch_T0000491;gene_id=NA12877_ch_G0000139;Parent=NA12877_ch_T0000491;transcript_name=NA12877_ch_T0000491;gene_name=RBMY2KP;ID=exon:NA12877_ch_T0000491:6;Name=RBMY2KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7819949	7821960	.	+	.	source_gene_common_name=TSPY24P;source_gene=ENSG00000215601.3;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;gene_id=NA12877_ch_G0000140;gene_biotype=unprocessed_pseudogene;gene_name=TSPY24P;gene_sources=liftoff;ID=NA12877_ch_G0000140;Name=TSPY24P
NA12877_chrY	CAT	transcript	7819949	7821960	1000	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=NA12877_ch_T0000492;gene_id=NA12877_ch_G0000140;Parent=NA12877_ch_G0000140;transcript_name=NA12877_ch_T0000492;gene_name=TSPY24P;ID=NA12877_ch_T0000492;Name=TSPY24P
NA12877_chrY	CAT	exon	7819949	7820086	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=NA12877_ch_T0000492;gene_id=NA12877_ch_G0000140;Parent=NA12877_ch_T0000492;transcript_name=NA12877_ch_T0000492;gene_name=TSPY24P;ID=exon:NA12877_ch_T0000492:0;Name=TSPY24P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7820087	7821451	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=NA12877_ch_T0000492;gene_id=NA12877_ch_G0000140;Parent=NA12877_ch_T0000492;transcript_name=NA12877_ch_T0000492;gene_name=TSPY24P;ID=intron:NA12877_ch_T0000492:0;Name=TSPY24P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7821452	7821561	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=NA12877_ch_T0000492;gene_id=NA12877_ch_G0000140;Parent=NA12877_ch_T0000492;transcript_name=NA12877_ch_T0000492;gene_name=TSPY24P;ID=exon:NA12877_ch_T0000492:1;Name=TSPY24P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7821562	7821647	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=NA12877_ch_T0000492;gene_id=NA12877_ch_G0000140;Parent=NA12877_ch_T0000492;transcript_name=NA12877_ch_T0000492;gene_name=TSPY24P;ID=intron:NA12877_ch_T0000492:1;Name=TSPY24P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7821648	7821793	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=NA12877_ch_T0000492;gene_id=NA12877_ch_G0000140;Parent=NA12877_ch_T0000492;transcript_name=NA12877_ch_T0000492;gene_name=TSPY24P;ID=exon:NA12877_ch_T0000492:2;Name=TSPY24P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7821794	7821911	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=NA12877_ch_T0000492;gene_id=NA12877_ch_G0000140;Parent=NA12877_ch_T0000492;transcript_name=NA12877_ch_T0000492;gene_name=TSPY24P;ID=intron:NA12877_ch_T0000492:2;Name=TSPY24P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7821912	7821960	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=NA12877_ch_T0000492;gene_id=NA12877_ch_G0000140;Parent=NA12877_ch_T0000492;transcript_name=NA12877_ch_T0000492;gene_name=TSPY24P;ID=exon:NA12877_ch_T0000492:3;Name=TSPY24P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7890664	7891876	.	+	.	source_gene_common_name=ZNF736P6Y;source_gene=ENSG00000224634.1;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;gene_id=NA12877_ch_G0000141;gene_biotype=processed_pseudogene;gene_name=ZNF736P6Y;gene_sources=liftoff;ID=NA12877_ch_G0000141;Name=ZNF736P6Y
NA12877_chrY	CAT	transcript	7890664	7891876	1000	+	.	source_transcript=ENST00000447526.1;source_transcript_name=ZNF736P6Y-201;source_gene=ENSG00000224634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447526.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P6Y;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;transcript_id=NA12877_ch_T0000493;gene_id=NA12877_ch_G0000141;Parent=NA12877_ch_G0000141;transcript_name=NA12877_ch_T0000493;gene_name=ZNF736P6Y;ID=NA12877_ch_T0000493;Name=ZNF736P6Y
NA12877_chrY	CAT	exon	7890664	7891876	.	+	.	source_transcript=ENST00000447526.1;source_transcript_name=ZNF736P6Y-201;source_gene=ENSG00000224634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P6Y;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;transcript_id=NA12877_ch_T0000493;gene_id=NA12877_ch_G0000141;Parent=NA12877_ch_T0000493;transcript_name=NA12877_ch_T0000493;gene_name=ZNF736P6Y;ID=exon:NA12877_ch_T0000493:0;Name=ZNF736P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7903268	7903691	.	-	.	source_gene_common_name=MTND6P1;source_gene=ENSG00000223955.1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;gene_id=NA12877_ch_G0000142;gene_biotype=processed_pseudogene;gene_name=MTND6P1;gene_sources=liftoff;ID=NA12877_ch_G0000142;Name=MTND6P1
NA12877_chrY	CAT	transcript	7903268	7903691	1000	-	.	source_transcript=ENST00000417434.1;source_transcript_name=MTND6P1-201;source_gene=ENSG00000223955.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223955.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417434.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND6P1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;transcript_id=NA12877_ch_T0000494;gene_id=NA12877_ch_G0000142;Parent=NA12877_ch_G0000142;transcript_name=NA12877_ch_T0000494;gene_name=MTND6P1;ID=NA12877_ch_T0000494;Name=MTND6P1
NA12877_chrY	CAT	exon	7903268	7903691	.	-	.	source_transcript=ENST00000417434.1;source_transcript_name=MTND6P1-201;source_gene=ENSG00000223955.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223955.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417434.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND6P1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;transcript_id=NA12877_ch_T0000494;gene_id=NA12877_ch_G0000142;Parent=NA12877_ch_T0000494;transcript_name=NA12877_ch_T0000494;gene_name=MTND6P1;ID=exon:NA12877_ch_T0000494:0;Name=MTND6P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7903764	7904874	.	+	.	source_gene_common_name=MTCYBP1;source_gene=ENSG00000234179.1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;gene_id=NA12877_ch_G0000143;gene_biotype=processed_pseudogene;gene_name=MTCYBP1;gene_sources=liftoff;ID=NA12877_ch_G0000143;Name=MTCYBP1
NA12877_chrY	CAT	transcript	7903764	7904874	1000	+	.	source_transcript=ENST00000454315.1;source_transcript_name=MTCYBP1-201;source_gene=ENSG00000234179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454315.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454315.1;transcript_score=198.57;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;transcript_id=NA12877_ch_T0000495;gene_id=NA12877_ch_G0000143;Parent=NA12877_ch_G0000143;transcript_name=NA12877_ch_T0000495;gene_name=MTCYBP1;ID=NA12877_ch_T0000495;Name=MTCYBP1
NA12877_chrY	CAT	exon	7903764	7904874	.	+	.	source_transcript=ENST00000454315.1;source_transcript_name=MTCYBP1-201;source_gene=ENSG00000234179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454315.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454315.1;transcript_score=198.57;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;transcript_id=NA12877_ch_T0000495;gene_id=NA12877_ch_G0000143;Parent=NA12877_ch_T0000495;transcript_name=NA12877_ch_T0000495;gene_name=MTCYBP1;ID=exon:NA12877_ch_T0000495:0;Name=MTCYBP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7911387	7911754	.	+	.	source_gene_common_name=MTND1P1;source_gene=ENSG00000226529.1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;gene_id=NA12877_ch_G0000144;gene_biotype=processed_pseudogene;gene_name=MTND1P1;gene_sources=liftoff;ID=NA12877_ch_G0000144;Name=MTND1P1
NA12877_chrY	CAT	transcript	7911387	7911754	1000	+	.	source_transcript=ENST00000445453.1;source_transcript_name=MTND1P1-201;source_gene=ENSG00000226529.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226529.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445453.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;transcript_id=NA12877_ch_T0000496;gene_id=NA12877_ch_G0000144;Parent=NA12877_ch_G0000144;transcript_name=NA12877_ch_T0000496;gene_name=MTND1P1;ID=NA12877_ch_T0000496;Name=MTND1P1
NA12877_chrY	CAT	exon	7911387	7911754	.	+	.	source_transcript=ENST00000445453.1;source_transcript_name=MTND1P1-201;source_gene=ENSG00000226529.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226529.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445453.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;transcript_id=NA12877_ch_T0000496;gene_id=NA12877_ch_G0000144;Parent=NA12877_ch_T0000496;transcript_name=NA12877_ch_T0000496;gene_name=MTND1P1;ID=exon:NA12877_ch_T0000496:0;Name=MTND1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7911965	7912434	.	+	.	source_gene_common_name=MTND2P3;source_gene=ENSG00000234850.1;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;gene_id=NA12877_ch_G0000145;gene_biotype=processed_pseudogene;gene_name=MTND2P3;gene_sources=liftoff;ID=NA12877_ch_G0000145;Name=MTND2P3
NA12877_chrY	CAT	transcript	7911965	7912434	1000	+	.	source_transcript=ENST00000452458.1;source_transcript_name=MTND2P3-201;source_gene=ENSG00000234850.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234850.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452458.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND2P3;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;transcript_id=NA12877_ch_T0000497;gene_id=NA12877_ch_G0000145;Parent=NA12877_ch_G0000145;transcript_name=NA12877_ch_T0000497;gene_name=MTND2P3;ID=NA12877_ch_T0000497;Name=MTND2P3
NA12877_chrY	CAT	exon	7911965	7912434	.	+	.	source_transcript=ENST00000452458.1;source_transcript_name=MTND2P3-201;source_gene=ENSG00000234850.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234850.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452458.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND2P3;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;transcript_id=NA12877_ch_T0000497;gene_id=NA12877_ch_G0000145;Parent=NA12877_ch_T0000497;transcript_name=NA12877_ch_T0000497;gene_name=MTND2P3;ID=exon:NA12877_ch_T0000497:0;Name=MTND2P3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7934765	7947124	.	+	.	source_gene_common_name=ENSG00000303338;source_gene=ENSG00000303338.1;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;gene_id=NA12877_ch_G0000146;gene_biotype=lncRNA;gene_name=ENSG00000303338;gene_sources=liftoff;ID=NA12877_ch_G0000146;Name=ENSG00000303338
NA12877_chrY	CAT	transcript	7934765	7942565	1000	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=NA12877_ch_T0000498;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_G0000146;transcript_name=NA12877_ch_T0000498;gene_name=ENSG00000303338;ID=NA12877_ch_T0000498;Name=ENSG00000303338
NA12877_chrY	CAT	exon	7934765	7934856	.	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=NA12877_ch_T0000498;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000498;transcript_name=NA12877_ch_T0000498;gene_name=ENSG00000303338;ID=exon:NA12877_ch_T0000498:0;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7934857	7942450	.	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=NA12877_ch_T0000498;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000498;transcript_name=NA12877_ch_T0000498;gene_name=ENSG00000303338;ID=intron:NA12877_ch_T0000498:0;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7942451	7942565	.	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=NA12877_ch_T0000498;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000498;transcript_name=NA12877_ch_T0000498;gene_name=ENSG00000303338;ID=exon:NA12877_ch_T0000498:1;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7934765	7940054	1000	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=NA12877_ch_T0000499;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_G0000146;transcript_name=NA12877_ch_T0000499;gene_name=ENSG00000303338;ID=NA12877_ch_T0000499;Name=ENSG00000303338
NA12877_chrY	CAT	exon	7934765	7934856	.	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=NA12877_ch_T0000499;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000499;transcript_name=NA12877_ch_T0000499;gene_name=ENSG00000303338;ID=exon:NA12877_ch_T0000499:0;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7934857	7939797	.	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=NA12877_ch_T0000499;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000499;transcript_name=NA12877_ch_T0000499;gene_name=ENSG00000303338;ID=intron:NA12877_ch_T0000499:0;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7939798	7940054	.	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=NA12877_ch_T0000499;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000499;transcript_name=NA12877_ch_T0000499;gene_name=ENSG00000303338;ID=exon:NA12877_ch_T0000499:1;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7934771	7942560	1000	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=NA12877_ch_T0000500;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_G0000146;transcript_name=NA12877_ch_T0000500;gene_name=ENSG00000303338;ID=NA12877_ch_T0000500;Name=ENSG00000303338
NA12877_chrY	CAT	exon	7934771	7934856	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=NA12877_ch_T0000500;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000500;transcript_name=NA12877_ch_T0000500;gene_name=ENSG00000303338;ID=exon:NA12877_ch_T0000500:0;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7934857	7939797	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=NA12877_ch_T0000500;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000500;transcript_name=NA12877_ch_T0000500;gene_name=ENSG00000303338;ID=intron:NA12877_ch_T0000500:0;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7939798	7939883	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=NA12877_ch_T0000500;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000500;transcript_name=NA12877_ch_T0000500;gene_name=ENSG00000303338;ID=exon:NA12877_ch_T0000500:1;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7939884	7942450	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=NA12877_ch_T0000500;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000500;transcript_name=NA12877_ch_T0000500;gene_name=ENSG00000303338;ID=intron:NA12877_ch_T0000500:1;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7942451	7942560	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=NA12877_ch_T0000500;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000500;transcript_name=NA12877_ch_T0000500;gene_name=ENSG00000303338;ID=exon:NA12877_ch_T0000500:2;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	7934797	7947124	1000	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=NA12877_ch_T0000501;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_G0000146;transcript_name=NA12877_ch_T0000501;gene_name=ENSG00000303338;ID=NA12877_ch_T0000501;Name=ENSG00000303338
NA12877_chrY	CAT	exon	7934797	7934856	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=NA12877_ch_T0000501;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000501;transcript_name=NA12877_ch_T0000501;gene_name=ENSG00000303338;ID=exon:NA12877_ch_T0000501:0;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7934857	7942450	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=NA12877_ch_T0000501;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000501;transcript_name=NA12877_ch_T0000501;gene_name=ENSG00000303338;ID=intron:NA12877_ch_T0000501:0;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7942451	7942704	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=NA12877_ch_T0000501;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000501;transcript_name=NA12877_ch_T0000501;gene_name=ENSG00000303338;ID=exon:NA12877_ch_T0000501:1;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7942705	7943405	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=NA12877_ch_T0000501;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000501;transcript_name=NA12877_ch_T0000501;gene_name=ENSG00000303338;ID=intron:NA12877_ch_T0000501:1;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7943406	7943558	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=NA12877_ch_T0000501;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000501;transcript_name=NA12877_ch_T0000501;gene_name=ENSG00000303338;ID=exon:NA12877_ch_T0000501:2;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7943559	7946850	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=NA12877_ch_T0000501;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000501;transcript_name=NA12877_ch_T0000501;gene_name=ENSG00000303338;ID=intron:NA12877_ch_T0000501:2;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7946851	7947124	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=NA12877_ch_T0000501;gene_id=NA12877_ch_G0000146;Parent=NA12877_ch_T0000501;transcript_name=NA12877_ch_T0000501;gene_name=ENSG00000303338;ID=exon:NA12877_ch_T0000501:3;Name=ENSG00000303338;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7952761	7953778	.	-	.	source_gene_common_name=TRIM60P3Y;source_gene=ENSG00000227830.1;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;gene_id=NA12877_ch_G0000147;gene_biotype=processed_pseudogene;gene_name=TRIM60P3Y;gene_sources=liftoff;ID=NA12877_ch_G0000147;Name=TRIM60P3Y
NA12877_chrY	CAT	transcript	7952761	7953778	1000	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=NA12877_ch_T0000502;gene_id=NA12877_ch_G0000147;Parent=NA12877_ch_G0000147;transcript_name=NA12877_ch_T0000502;gene_name=TRIM60P3Y;ID=NA12877_ch_T0000502;Name=TRIM60P3Y
NA12877_chrY	CAT	exon	7952761	7953178	.	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=NA12877_ch_T0000502;gene_id=NA12877_ch_G0000147;Parent=NA12877_ch_T0000502;transcript_name=NA12877_ch_T0000502;gene_name=TRIM60P3Y;ID=exon:NA12877_ch_T0000502:0;Name=TRIM60P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	7953179	7953523	.	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=NA12877_ch_T0000502;gene_id=NA12877_ch_G0000147;Parent=NA12877_ch_T0000502;transcript_name=NA12877_ch_T0000502;gene_name=TRIM60P3Y;ID=intron:NA12877_ch_T0000502:0;Name=TRIM60P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	7953524	7953778	.	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=NA12877_ch_T0000502;gene_id=NA12877_ch_G0000147;Parent=NA12877_ch_T0000502;transcript_name=NA12877_ch_T0000502;gene_name=TRIM60P3Y;ID=exon:NA12877_ch_T0000502:1;Name=TRIM60P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	7958515	7959624	.	-	.	source_gene_common_name=ZNF736P10Y;source_gene=ENSG00000216824.2;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;gene_id=NA12877_ch_G0000148;gene_biotype=processed_pseudogene;gene_name=ZNF736P10Y;gene_sources=liftoff;ID=NA12877_ch_G0000148;Name=ZNF736P10Y
NA12877_chrY	CAT	transcript	7958515	7959624	1000	-	.	source_transcript=ENST00000403990.2;source_transcript_name=ZNF736P10Y-201;source_gene=ENSG00000216824.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216824.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403990.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P10Y;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;transcript_id=NA12877_ch_T0000503;gene_id=NA12877_ch_G0000148;Parent=NA12877_ch_G0000148;transcript_name=NA12877_ch_T0000503;gene_name=ZNF736P10Y;ID=NA12877_ch_T0000503;Name=ZNF736P10Y
NA12877_chrY	CAT	exon	7958515	7959624	.	-	.	source_transcript=ENST00000403990.2;source_transcript_name=ZNF736P10Y-201;source_gene=ENSG00000216824.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216824.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403990.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P10Y;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;transcript_id=NA12877_ch_T0000503;gene_id=NA12877_ch_G0000148;Parent=NA12877_ch_T0000503;transcript_name=NA12877_ch_T0000503;gene_name=ZNF736P10Y;ID=exon:NA12877_ch_T0000503:0;Name=ZNF736P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8057091	8057475	.	-	.	source_gene_common_name=ENSG00000275866;source_gene=ENSG00000275866.1;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;gene_id=NA12877_ch_G0000149;gene_biotype=processed_pseudogene;gene_name=ENSG00000275866;gene_sources=liftoff;ID=NA12877_ch_G0000149;Name=ENSG00000275866
NA12877_chrY	CAT	transcript	8057091	8057475	1000	-	.	source_transcript=ENST00000621514.1;source_transcript_name=ENST00000621514;source_gene=ENSG00000275866.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275866.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621514.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275866;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;transcript_id=NA12877_ch_T0000504;gene_id=NA12877_ch_G0000149;Parent=NA12877_ch_G0000149;transcript_name=NA12877_ch_T0000504;gene_name=ENSG00000275866;ID=NA12877_ch_T0000504;Name=ENSG00000275866
NA12877_chrY	CAT	exon	8057091	8057475	.	-	.	source_transcript=ENST00000621514.1;source_transcript_name=ENST00000621514;source_gene=ENSG00000275866.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275866.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621514.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275866;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;transcript_id=NA12877_ch_T0000504;gene_id=NA12877_ch_G0000149;Parent=NA12877_ch_T0000504;transcript_name=NA12877_ch_T0000504;gene_name=ENSG00000275866;ID=exon:NA12877_ch_T0000504:0;Name=ENSG00000275866;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8090222	8253630	.	+	.	source_gene_common_name=LINC00279;source_gene=ENSG00000286217.3;gene_id=NA12877_ch_G0000150;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=NA12877_ch_G0000150;Name=LINC00279
NA12877_chrY	CAT	transcript	8090222	8100650	1000	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000505;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000505;gene_name=LINC00279;ID=NA12877_ch_T0000505;Name=LINC00279
NA12877_chrY	CAT	exon	8090222	8090333	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000505;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000505;transcript_name=NA12877_ch_T0000505;gene_name=LINC00279;ID=exon:NA12877_ch_T0000505:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8090334	8099159	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000505;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000505;transcript_name=NA12877_ch_T0000505;gene_name=LINC00279;ID=intron:NA12877_ch_T0000505:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8099160	8099267	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000505;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000505;transcript_name=NA12877_ch_T0000505;gene_name=LINC00279;ID=exon:NA12877_ch_T0000505:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8099268	8100118	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000505;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000505;transcript_name=NA12877_ch_T0000505;gene_name=LINC00279;ID=intron:NA12877_ch_T0000505:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8100119	8100650	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000505;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000505;transcript_name=NA12877_ch_T0000505;gene_name=LINC00279;ID=exon:NA12877_ch_T0000505:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8090246	8142267	1000	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=NA12877_ch_T0000506;Name=LINC00279
NA12877_chrY	CAT	exon	8090246	8090333	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8090334	8099159	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8099160	8099267	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8099268	8100118	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8100119	8100238	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8100239	8100808	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8100809	8100886	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8100887	8101780	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8101781	8102015	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8102016	8121380	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8121381	8121544	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:5;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8121545	8123311	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:5;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8123312	8123427	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:6;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8123428	8124935	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:6;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8124936	8124986	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:7;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8124987	8134944	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:7;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8134945	8135184	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:8;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8135185	8136531	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:8;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8136532	8136612	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:9;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8136613	8136837	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:9;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8136838	8136931	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:10;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8136932	8137282	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:10;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8137283	8137442	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:11;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8137443	8140359	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:11;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8140360	8140440	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:12;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8140441	8140652	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:12;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8140653	8140760	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:13;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8140761	8140931	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=intron:NA12877_ch_T0000506:13;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8140932	8142267	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000506;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000506;transcript_name=NA12877_ch_T0000506;gene_name=LINC00279;ID=exon:NA12877_ch_T0000506:14;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8123175	8190295	1000	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000507;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000507;gene_name=LINC00279;ID=NA12877_ch_T0000507;Name=LINC00279
NA12877_chrY	CAT	exon	8123175	8123427	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000507;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000507;transcript_name=NA12877_ch_T0000507;gene_name=LINC00279;ID=exon:NA12877_ch_T0000507:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8123428	8172254	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000507;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000507;transcript_name=NA12877_ch_T0000507;gene_name=LINC00279;ID=intron:NA12877_ch_T0000507:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8172255	8172341	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000507;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000507;transcript_name=NA12877_ch_T0000507;gene_name=LINC00279;ID=exon:NA12877_ch_T0000507:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8172342	8172801	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000507;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000507;transcript_name=NA12877_ch_T0000507;gene_name=LINC00279;ID=intron:NA12877_ch_T0000507:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8172802	8173024	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000507;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000507;transcript_name=NA12877_ch_T0000507;gene_name=LINC00279;ID=exon:NA12877_ch_T0000507:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8173025	8189231	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000507;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000507;transcript_name=NA12877_ch_T0000507;gene_name=LINC00279;ID=intron:NA12877_ch_T0000507:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8189232	8189381	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000507;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000507;transcript_name=NA12877_ch_T0000507;gene_name=LINC00279;ID=exon:NA12877_ch_T0000507:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8189382	8189957	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000507;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000507;transcript_name=NA12877_ch_T0000507;gene_name=LINC00279;ID=intron:NA12877_ch_T0000507:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8189958	8190295	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000507;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000507;transcript_name=NA12877_ch_T0000507;gene_name=LINC00279;ID=exon:NA12877_ch_T0000507:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8123175	8227262	1000	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000508;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000508;gene_name=LINC00279;ID=NA12877_ch_T0000508;Name=LINC00279
NA12877_chrY	CAT	exon	8123175	8123427	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000508;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000508;transcript_name=NA12877_ch_T0000508;gene_name=LINC00279;ID=exon:NA12877_ch_T0000508:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8123428	8218153	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000508;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000508;transcript_name=NA12877_ch_T0000508;gene_name=LINC00279;ID=intron:NA12877_ch_T0000508:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8218154	8218228	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000508;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000508;transcript_name=NA12877_ch_T0000508;gene_name=LINC00279;ID=exon:NA12877_ch_T0000508:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8218229	8220552	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000508;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000508;transcript_name=NA12877_ch_T0000508;gene_name=LINC00279;ID=intron:NA12877_ch_T0000508:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8220553	8220712	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000508;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000508;transcript_name=NA12877_ch_T0000508;gene_name=LINC00279;ID=exon:NA12877_ch_T0000508:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8220713	8222143	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000508;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000508;transcript_name=NA12877_ch_T0000508;gene_name=LINC00279;ID=intron:NA12877_ch_T0000508:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8222144	8222305	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000508;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000508;transcript_name=NA12877_ch_T0000508;gene_name=LINC00279;ID=exon:NA12877_ch_T0000508:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8222306	8227014	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000508;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000508;transcript_name=NA12877_ch_T0000508;gene_name=LINC00279;ID=intron:NA12877_ch_T0000508:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8227015	8227262	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000508;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000508;transcript_name=NA12877_ch_T0000508;gene_name=LINC00279;ID=exon:NA12877_ch_T0000508:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8123186	8253630	1000	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=NA12877_ch_T0000509;Name=LINC00279
NA12877_chrY	CAT	exon	8123186	8123427	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=exon:NA12877_ch_T0000509:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8123428	8218153	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=intron:NA12877_ch_T0000509:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8218154	8218228	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=exon:NA12877_ch_T0000509:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8218229	8220552	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=intron:NA12877_ch_T0000509:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8220553	8220712	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=exon:NA12877_ch_T0000509:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8220713	8222143	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=intron:NA12877_ch_T0000509:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8222144	8222305	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=exon:NA12877_ch_T0000509:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8222306	8227014	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=intron:NA12877_ch_T0000509:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8227015	8227218	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=exon:NA12877_ch_T0000509:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8227219	8230000	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=intron:NA12877_ch_T0000509:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8230001	8230162	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=exon:NA12877_ch_T0000509:5;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8230163	8232833	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=intron:NA12877_ch_T0000509:5;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8232834	8233029	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=exon:NA12877_ch_T0000509:6;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8233030	8237562	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=intron:NA12877_ch_T0000509:6;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8237563	8237724	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=exon:NA12877_ch_T0000509:7;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8237725	8239877	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=intron:NA12877_ch_T0000509:7;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8239878	8240039	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=exon:NA12877_ch_T0000509:8;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8240040	8244906	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=intron:NA12877_ch_T0000509:8;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8244907	8245068	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=exon:NA12877_ch_T0000509:9;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8245069	8249903	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=intron:NA12877_ch_T0000509:9;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8249904	8250065	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=exon:NA12877_ch_T0000509:10;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8250066	8253058	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=intron:NA12877_ch_T0000509:10;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8253059	8253630	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000509;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000509;transcript_name=NA12877_ch_T0000509;gene_name=LINC00279;ID=exon:NA12877_ch_T0000509:11;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8123203	8135787	1000	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000510;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000510;gene_name=LINC00279;ID=NA12877_ch_T0000510;Name=LINC00279
NA12877_chrY	CAT	exon	8123203	8123433	.	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000510;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000510;transcript_name=NA12877_ch_T0000510;gene_name=LINC00279;ID=exon:NA12877_ch_T0000510:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8123434	8134922	.	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000510;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000510;transcript_name=NA12877_ch_T0000510;gene_name=LINC00279;ID=intron:NA12877_ch_T0000510:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8134923	8135787	.	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000510;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000510;transcript_name=NA12877_ch_T0000510;gene_name=LINC00279;ID=exon:NA12877_ch_T0000510:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8123203	8190293	1000	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000511;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000511;gene_name=LINC00279;ID=NA12877_ch_T0000511;Name=LINC00279
NA12877_chrY	CAT	exon	8123203	8123427	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000511;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000511;transcript_name=NA12877_ch_T0000511;gene_name=LINC00279;ID=exon:NA12877_ch_T0000511:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8123428	8189231	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000511;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000511;transcript_name=NA12877_ch_T0000511;gene_name=LINC00279;ID=intron:NA12877_ch_T0000511:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8189232	8189381	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000511;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000511;transcript_name=NA12877_ch_T0000511;gene_name=LINC00279;ID=exon:NA12877_ch_T0000511:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8189382	8189957	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000511;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000511;transcript_name=NA12877_ch_T0000511;gene_name=LINC00279;ID=intron:NA12877_ch_T0000511:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8189958	8190293	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000511;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000511;transcript_name=NA12877_ch_T0000511;gene_name=LINC00279;ID=exon:NA12877_ch_T0000511:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8123214	8190292	1000	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000512;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000512;gene_name=LINC00279;ID=NA12877_ch_T0000512;Name=LINC00279
NA12877_chrY	CAT	exon	8123214	8123433	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000512;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000512;transcript_name=NA12877_ch_T0000512;gene_name=LINC00279;ID=exon:NA12877_ch_T0000512:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8123434	8189231	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000512;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000512;transcript_name=NA12877_ch_T0000512;gene_name=LINC00279;ID=intron:NA12877_ch_T0000512:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8189232	8189381	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000512;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000512;transcript_name=NA12877_ch_T0000512;gene_name=LINC00279;ID=exon:NA12877_ch_T0000512:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8189382	8189957	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000512;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000512;transcript_name=NA12877_ch_T0000512;gene_name=LINC00279;ID=intron:NA12877_ch_T0000512:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8189958	8190292	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000512;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000512;transcript_name=NA12877_ch_T0000512;gene_name=LINC00279;ID=exon:NA12877_ch_T0000512:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8123233	8234642	1000	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=NA12877_ch_T0000513;Name=LINC00279
NA12877_chrY	CAT	exon	8123233	8123427	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=exon:NA12877_ch_T0000513:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8123428	8218153	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=intron:NA12877_ch_T0000513:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8218154	8218228	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=exon:NA12877_ch_T0000513:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8218229	8220552	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=intron:NA12877_ch_T0000513:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8220553	8220712	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=exon:NA12877_ch_T0000513:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8220713	8222143	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=intron:NA12877_ch_T0000513:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8222144	8222305	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=exon:NA12877_ch_T0000513:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8222306	8227014	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=intron:NA12877_ch_T0000513:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8227015	8227218	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=exon:NA12877_ch_T0000513:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8227219	8230000	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=intron:NA12877_ch_T0000513:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8230001	8230162	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=exon:NA12877_ch_T0000513:5;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8230163	8232833	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=intron:NA12877_ch_T0000513:5;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8232834	8233968	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=exon:NA12877_ch_T0000513:6;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8233969	8234193	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=intron:NA12877_ch_T0000513:6;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8234194	8234642	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000513;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000513;transcript_name=NA12877_ch_T0000513;gene_name=LINC00279;ID=exon:NA12877_ch_T0000513:7;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8123233	8205819	1000	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000514;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000514;gene_name=LINC00279;ID=NA12877_ch_T0000514;Name=LINC00279
NA12877_chrY	CAT	exon	8123233	8123427	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000514;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000514;transcript_name=NA12877_ch_T0000514;gene_name=LINC00279;ID=exon:NA12877_ch_T0000514:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8123428	8197753	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000514;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000514;transcript_name=NA12877_ch_T0000514;gene_name=LINC00279;ID=intron:NA12877_ch_T0000514:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8197754	8197826	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000514;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000514;transcript_name=NA12877_ch_T0000514;gene_name=LINC00279;ID=exon:NA12877_ch_T0000514:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8197827	8200295	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000514;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000514;transcript_name=NA12877_ch_T0000514;gene_name=LINC00279;ID=intron:NA12877_ch_T0000514:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8200296	8205819	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000514;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000514;transcript_name=NA12877_ch_T0000514;gene_name=LINC00279;ID=exon:NA12877_ch_T0000514:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8123353	8137534	1000	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000515;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000515;gene_name=LINC00279;ID=NA12877_ch_T0000515;Name=LINC00279
NA12877_chrY	CAT	exon	8123353	8123433	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000515;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000515;transcript_name=NA12877_ch_T0000515;gene_name=LINC00279;ID=exon:NA12877_ch_T0000515:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8123434	8124935	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000515;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000515;transcript_name=NA12877_ch_T0000515;gene_name=LINC00279;ID=intron:NA12877_ch_T0000515:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8124936	8124986	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000515;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000515;transcript_name=NA12877_ch_T0000515;gene_name=LINC00279;ID=exon:NA12877_ch_T0000515:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8124987	8134944	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000515;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000515;transcript_name=NA12877_ch_T0000515;gene_name=LINC00279;ID=intron:NA12877_ch_T0000515:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8134945	8135184	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000515;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000515;transcript_name=NA12877_ch_T0000515;gene_name=LINC00279;ID=exon:NA12877_ch_T0000515:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8135185	8137282	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000515;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000515;transcript_name=NA12877_ch_T0000515;gene_name=LINC00279;ID=intron:NA12877_ch_T0000515:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8137283	8137534	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000515;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000515;transcript_name=NA12877_ch_T0000515;gene_name=LINC00279;ID=exon:NA12877_ch_T0000515:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8139783	8190267	1000	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=NA12877_ch_T0000516;Name=LINC00279
NA12877_chrY	CAT	exon	8139783	8140760	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=exon:NA12877_ch_T0000516:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8140761	8146690	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=intron:NA12877_ch_T0000516:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8146691	8146763	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=exon:NA12877_ch_T0000516:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8146764	8146970	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=intron:NA12877_ch_T0000516:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8146971	8147057	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=exon:NA12877_ch_T0000516:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8147058	8172254	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=intron:NA12877_ch_T0000516:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8172255	8172341	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=exon:NA12877_ch_T0000516:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8172342	8172801	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=intron:NA12877_ch_T0000516:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8172802	8173024	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=exon:NA12877_ch_T0000516:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8173025	8189231	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=intron:NA12877_ch_T0000516:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8189232	8189381	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=exon:NA12877_ch_T0000516:5;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8189382	8189957	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=intron:NA12877_ch_T0000516:5;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8189958	8190267	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000516;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000516;transcript_name=NA12877_ch_T0000516;gene_name=LINC00279;ID=exon:NA12877_ch_T0000516:6;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8172735	8227257	1000	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000517;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000517;gene_name=LINC00279;ID=NA12877_ch_T0000517;Name=LINC00279
NA12877_chrY	CAT	exon	8172735	8173024	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000517;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000517;transcript_name=NA12877_ch_T0000517;gene_name=LINC00279;ID=exon:NA12877_ch_T0000517:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8173025	8218153	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000517;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000517;transcript_name=NA12877_ch_T0000517;gene_name=LINC00279;ID=intron:NA12877_ch_T0000517:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8218154	8218228	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000517;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000517;transcript_name=NA12877_ch_T0000517;gene_name=LINC00279;ID=exon:NA12877_ch_T0000517:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8218229	8220552	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000517;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000517;transcript_name=NA12877_ch_T0000517;gene_name=LINC00279;ID=intron:NA12877_ch_T0000517:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8220553	8220712	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000517;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000517;transcript_name=NA12877_ch_T0000517;gene_name=LINC00279;ID=exon:NA12877_ch_T0000517:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8220713	8222143	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000517;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000517;transcript_name=NA12877_ch_T0000517;gene_name=LINC00279;ID=intron:NA12877_ch_T0000517:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8222144	8222305	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000517;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000517;transcript_name=NA12877_ch_T0000517;gene_name=LINC00279;ID=exon:NA12877_ch_T0000517:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8222306	8227014	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000517;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000517;transcript_name=NA12877_ch_T0000517;gene_name=LINC00279;ID=intron:NA12877_ch_T0000517:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8227015	8227257	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000517;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000517;transcript_name=NA12877_ch_T0000517;gene_name=LINC00279;ID=exon:NA12877_ch_T0000517:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8172787	8190295	1000	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000518;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000518;gene_name=LINC00279;ID=NA12877_ch_T0000518;Name=LINC00279
NA12877_chrY	CAT	exon	8172787	8173024	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000518;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000518;transcript_name=NA12877_ch_T0000518;gene_name=LINC00279;ID=exon:NA12877_ch_T0000518:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8173025	8189231	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000518;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000518;transcript_name=NA12877_ch_T0000518;gene_name=LINC00279;ID=intron:NA12877_ch_T0000518:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8189232	8189381	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000518;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000518;transcript_name=NA12877_ch_T0000518;gene_name=LINC00279;ID=exon:NA12877_ch_T0000518:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8189382	8189957	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000518;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000518;transcript_name=NA12877_ch_T0000518;gene_name=LINC00279;ID=intron:NA12877_ch_T0000518:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8189958	8190295	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000518;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000518;transcript_name=NA12877_ch_T0000518;gene_name=LINC00279;ID=exon:NA12877_ch_T0000518:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8172878	8190201	1000	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000519;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000519;gene_name=LINC00279;ID=NA12877_ch_T0000519;Name=LINC00279
NA12877_chrY	CAT	exon	8172878	8173024	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000519;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000519;transcript_name=NA12877_ch_T0000519;gene_name=LINC00279;ID=exon:NA12877_ch_T0000519:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8173025	8179356	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000519;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000519;transcript_name=NA12877_ch_T0000519;gene_name=LINC00279;ID=intron:NA12877_ch_T0000519:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8179357	8179585	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000519;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000519;transcript_name=NA12877_ch_T0000519;gene_name=LINC00279;ID=exon:NA12877_ch_T0000519:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8179586	8183928	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000519;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000519;transcript_name=NA12877_ch_T0000519;gene_name=LINC00279;ID=intron:NA12877_ch_T0000519:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8183929	8184124	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000519;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000519;transcript_name=NA12877_ch_T0000519;gene_name=LINC00279;ID=exon:NA12877_ch_T0000519:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8184125	8189231	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000519;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000519;transcript_name=NA12877_ch_T0000519;gene_name=LINC00279;ID=intron:NA12877_ch_T0000519:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8189232	8189381	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000519;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000519;transcript_name=NA12877_ch_T0000519;gene_name=LINC00279;ID=exon:NA12877_ch_T0000519:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8189382	8189957	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000519;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000519;transcript_name=NA12877_ch_T0000519;gene_name=LINC00279;ID=intron:NA12877_ch_T0000519:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8189958	8190201	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000519;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000519;transcript_name=NA12877_ch_T0000519;gene_name=LINC00279;ID=exon:NA12877_ch_T0000519:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8178091	8184639	1000	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000520;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000520;gene_name=LINC00279;ID=NA12877_ch_T0000520;Name=LINC00279
NA12877_chrY	CAT	exon	8178091	8178203	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000520;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000520;transcript_name=NA12877_ch_T0000520;gene_name=LINC00279;ID=exon:NA12877_ch_T0000520:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8178204	8183928	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000520;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000520;transcript_name=NA12877_ch_T0000520;gene_name=LINC00279;ID=intron:NA12877_ch_T0000520:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8183929	8184124	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000520;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000520;transcript_name=NA12877_ch_T0000520;gene_name=LINC00279;ID=exon:NA12877_ch_T0000520:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8184125	8184475	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000520;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000520;transcript_name=NA12877_ch_T0000520;gene_name=LINC00279;ID=intron:NA12877_ch_T0000520:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8184476	8184639	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000520;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000520;transcript_name=NA12877_ch_T0000520;gene_name=LINC00279;ID=exon:NA12877_ch_T0000520:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8199769	8200510	1000	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000521;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000521;gene_name=LINC00279;ID=NA12877_ch_T0000521;Name=LINC00279
NA12877_chrY	CAT	exon	8199769	8199960	.	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000521;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000521;transcript_name=NA12877_ch_T0000521;gene_name=LINC00279;ID=exon:NA12877_ch_T0000521:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8199961	8200295	.	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000521;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000521;transcript_name=NA12877_ch_T0000521;gene_name=LINC00279;ID=intron:NA12877_ch_T0000521:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8200296	8200510	.	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000521;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000521;transcript_name=NA12877_ch_T0000521;gene_name=LINC00279;ID=exon:NA12877_ch_T0000521:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8217518	8222530	1000	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000534;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000534;gene_name=LINC00279;ID=NA12877_ch_T0000534;Name=LINC00279
NA12877_chrY	CAT	exon	8217518	8217882	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000534;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000534;transcript_name=NA12877_ch_T0000534;gene_name=LINC00279;ID=exon:NA12877_ch_T0000534:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8217883	8218153	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000534;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000534;transcript_name=NA12877_ch_T0000534;gene_name=LINC00279;ID=intron:NA12877_ch_T0000534:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8218154	8218228	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000534;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000534;transcript_name=NA12877_ch_T0000534;gene_name=LINC00279;ID=exon:NA12877_ch_T0000534:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8218229	8220552	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000534;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000534;transcript_name=NA12877_ch_T0000534;gene_name=LINC00279;ID=intron:NA12877_ch_T0000534:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8220553	8220712	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000534;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000534;transcript_name=NA12877_ch_T0000534;gene_name=LINC00279;ID=exon:NA12877_ch_T0000534:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8220713	8222143	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000534;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000534;transcript_name=NA12877_ch_T0000534;gene_name=LINC00279;ID=intron:NA12877_ch_T0000534:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8222144	8222530	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000534;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000534;transcript_name=NA12877_ch_T0000534;gene_name=LINC00279;ID=exon:NA12877_ch_T0000534:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8217525	8218556	1000	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000535;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000535;gene_name=LINC00279;ID=NA12877_ch_T0000535;Name=LINC00279
NA12877_chrY	CAT	exon	8217525	8217882	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000535;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000535;transcript_name=NA12877_ch_T0000535;gene_name=LINC00279;ID=exon:NA12877_ch_T0000535:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8217883	8218153	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000535;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000535;transcript_name=NA12877_ch_T0000535;gene_name=LINC00279;ID=intron:NA12877_ch_T0000535:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8218154	8218228	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000535;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000535;transcript_name=NA12877_ch_T0000535;gene_name=LINC00279;ID=exon:NA12877_ch_T0000535:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8218229	8218388	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000535;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000535;transcript_name=NA12877_ch_T0000535;gene_name=LINC00279;ID=intron:NA12877_ch_T0000535:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8218389	8218556	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000535;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000535;transcript_name=NA12877_ch_T0000535;gene_name=LINC00279;ID=exon:NA12877_ch_T0000535:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8217670	8227258	1000	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000536;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000536;gene_name=LINC00279;ID=NA12877_ch_T0000536;Name=LINC00279
NA12877_chrY	CAT	exon	8217670	8217882	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000536;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000536;transcript_name=NA12877_ch_T0000536;gene_name=LINC00279;ID=exon:NA12877_ch_T0000536:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8217883	8218153	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000536;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000536;transcript_name=NA12877_ch_T0000536;gene_name=LINC00279;ID=intron:NA12877_ch_T0000536:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8218154	8218228	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000536;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000536;transcript_name=NA12877_ch_T0000536;gene_name=LINC00279;ID=exon:NA12877_ch_T0000536:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8218229	8220552	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000536;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000536;transcript_name=NA12877_ch_T0000536;gene_name=LINC00279;ID=intron:NA12877_ch_T0000536:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8220553	8220712	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000536;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000536;transcript_name=NA12877_ch_T0000536;gene_name=LINC00279;ID=exon:NA12877_ch_T0000536:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8220713	8222143	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000536;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000536;transcript_name=NA12877_ch_T0000536;gene_name=LINC00279;ID=intron:NA12877_ch_T0000536:2;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8222144	8222305	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000536;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000536;transcript_name=NA12877_ch_T0000536;gene_name=LINC00279;ID=exon:NA12877_ch_T0000536:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8222306	8227014	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000536;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000536;transcript_name=NA12877_ch_T0000536;gene_name=LINC00279;ID=intron:NA12877_ch_T0000536:3;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8227015	8227258	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000536;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000536;transcript_name=NA12877_ch_T0000536;gene_name=LINC00279;ID=exon:NA12877_ch_T0000536:4;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8225647	8227261	1000	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000544;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_G0000150;transcript_name=NA12877_ch_T0000544;gene_name=LINC00279;ID=NA12877_ch_T0000544;Name=LINC00279
NA12877_chrY	CAT	exon	8225647	8225901	.	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000544;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000544;transcript_name=NA12877_ch_T0000544;gene_name=LINC00279;ID=exon:NA12877_ch_T0000544:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8225902	8227014	.	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000544;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000544;transcript_name=NA12877_ch_T0000544;gene_name=LINC00279;ID=intron:NA12877_ch_T0000544:0;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8227015	8227261	.	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=NA12877_ch_T0000544;gene_id=NA12877_ch_G0000150;Parent=NA12877_ch_T0000544;transcript_name=NA12877_ch_T0000544;gene_name=LINC00279;ID=exon:NA12877_ch_T0000544:1;Name=LINC00279;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8207210	8218995	.	-	.	source_gene_common_name=ENSG00000309700;source_gene=ENSG00000309700.1;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;gene_id=NA12877_ch_G0000151;gene_biotype=lncRNA;gene_name=ENSG00000309700;gene_sources=liftoff;ID=NA12877_ch_G0000151;Name=ENSG00000309700
NA12877_chrY	CAT	transcript	8207210	8217531	1000	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=NA12877_ch_T0000522;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_G0000151;transcript_name=NA12877_ch_T0000522;gene_name=ENSG00000309700;ID=NA12877_ch_T0000522;Name=ENSG00000309700
NA12877_chrY	CAT	exon	8207210	8207452	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=NA12877_ch_T0000522;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000522;transcript_name=NA12877_ch_T0000522;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000522:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8207453	8213560	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=NA12877_ch_T0000522;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000522;transcript_name=NA12877_ch_T0000522;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000522:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8213561	8213709	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=NA12877_ch_T0000522;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000522;transcript_name=NA12877_ch_T0000522;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000522:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8213710	8214687	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=NA12877_ch_T0000522;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000522;transcript_name=NA12877_ch_T0000522;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000522:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8214688	8214762	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=NA12877_ch_T0000522;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000522;transcript_name=NA12877_ch_T0000522;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000522:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8214763	8217060	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=NA12877_ch_T0000522;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000522;transcript_name=NA12877_ch_T0000522;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000522:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8217061	8217531	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=NA12877_ch_T0000522;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000522;transcript_name=NA12877_ch_T0000522;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000522:3;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8207210	8213863	1000	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=NA12877_ch_T0000523;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_G0000151;transcript_name=NA12877_ch_T0000523;gene_name=ENSG00000309700;ID=NA12877_ch_T0000523;Name=ENSG00000309700
NA12877_chrY	CAT	exon	8207210	8207452	.	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=NA12877_ch_T0000523;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000523;transcript_name=NA12877_ch_T0000523;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000523:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8207453	8213560	.	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=NA12877_ch_T0000523;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000523;transcript_name=NA12877_ch_T0000523;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000523:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8213561	8213863	.	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=NA12877_ch_T0000523;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000523;transcript_name=NA12877_ch_T0000523;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000523:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8207211	8218974	1000	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=NA12877_ch_T0000524;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_G0000151;transcript_name=NA12877_ch_T0000524;gene_name=ENSG00000309700;ID=NA12877_ch_T0000524;Name=ENSG00000309700
NA12877_chrY	CAT	exon	8207211	8207452	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=NA12877_ch_T0000524;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000524;transcript_name=NA12877_ch_T0000524;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000524:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8207453	8213560	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=NA12877_ch_T0000524;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000524;transcript_name=NA12877_ch_T0000524;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000524:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8213561	8213709	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=NA12877_ch_T0000524;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000524;transcript_name=NA12877_ch_T0000524;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000524:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8213710	8214687	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=NA12877_ch_T0000524;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000524;transcript_name=NA12877_ch_T0000524;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000524:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8214688	8214762	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=NA12877_ch_T0000524;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000524;transcript_name=NA12877_ch_T0000524;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000524:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8214763	8217060	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=NA12877_ch_T0000524;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000524;transcript_name=NA12877_ch_T0000524;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000524:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8217061	8217291	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=NA12877_ch_T0000524;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000524;transcript_name=NA12877_ch_T0000524;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000524:3;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8217292	8218783	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=NA12877_ch_T0000524;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000524;transcript_name=NA12877_ch_T0000524;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000524:3;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8218784	8218974	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=NA12877_ch_T0000524;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000524;transcript_name=NA12877_ch_T0000524;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000524:4;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8207211	8218966	1000	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=NA12877_ch_T0000525;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_G0000151;transcript_name=NA12877_ch_T0000525;gene_name=ENSG00000309700;ID=NA12877_ch_T0000525;Name=ENSG00000309700
NA12877_chrY	CAT	exon	8207211	8207452	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=NA12877_ch_T0000525;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000525;transcript_name=NA12877_ch_T0000525;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000525:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8207453	8213560	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=NA12877_ch_T0000525;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000525;transcript_name=NA12877_ch_T0000525;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000525:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8213561	8213709	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=NA12877_ch_T0000525;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000525;transcript_name=NA12877_ch_T0000525;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000525:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8213710	8214687	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=NA12877_ch_T0000525;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000525;transcript_name=NA12877_ch_T0000525;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000525:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8214688	8214762	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=NA12877_ch_T0000525;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000525;transcript_name=NA12877_ch_T0000525;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000525:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8214763	8217060	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=NA12877_ch_T0000525;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000525;transcript_name=NA12877_ch_T0000525;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000525:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8217061	8217144	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=NA12877_ch_T0000525;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000525;transcript_name=NA12877_ch_T0000525;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000525:3;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8217145	8218783	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=NA12877_ch_T0000525;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000525;transcript_name=NA12877_ch_T0000525;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000525:3;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8218784	8218966	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=NA12877_ch_T0000525;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000525;transcript_name=NA12877_ch_T0000525;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000525:4;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8207211	8218880	1000	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=NA12877_ch_T0000526;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_G0000151;transcript_name=NA12877_ch_T0000526;gene_name=ENSG00000309700;ID=NA12877_ch_T0000526;Name=ENSG00000309700
NA12877_chrY	CAT	exon	8207211	8207452	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=NA12877_ch_T0000526;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000526;transcript_name=NA12877_ch_T0000526;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000526:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8207453	8214687	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=NA12877_ch_T0000526;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000526;transcript_name=NA12877_ch_T0000526;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000526:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8214688	8214762	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=NA12877_ch_T0000526;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000526;transcript_name=NA12877_ch_T0000526;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000526:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8214763	8217060	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=NA12877_ch_T0000526;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000526;transcript_name=NA12877_ch_T0000526;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000526:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8217061	8217144	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=NA12877_ch_T0000526;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000526;transcript_name=NA12877_ch_T0000526;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000526:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8217145	8218783	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=NA12877_ch_T0000526;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000526;transcript_name=NA12877_ch_T0000526;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000526:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8218784	8218880	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=NA12877_ch_T0000526;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000526;transcript_name=NA12877_ch_T0000526;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000526:3;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8207211	8217443	1000	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=NA12877_ch_T0000527;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_G0000151;transcript_name=NA12877_ch_T0000527;gene_name=ENSG00000309700;ID=NA12877_ch_T0000527;Name=ENSG00000309700
NA12877_chrY	CAT	exon	8207211	8207452	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=NA12877_ch_T0000527;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000527;transcript_name=NA12877_ch_T0000527;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000527:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8207453	8213560	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=NA12877_ch_T0000527;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000527;transcript_name=NA12877_ch_T0000527;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000527:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8213561	8213709	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=NA12877_ch_T0000527;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000527;transcript_name=NA12877_ch_T0000527;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000527:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8213710	8217060	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=NA12877_ch_T0000527;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000527;transcript_name=NA12877_ch_T0000527;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000527:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8217061	8217443	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=NA12877_ch_T0000527;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000527;transcript_name=NA12877_ch_T0000527;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000527:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8207211	8217397	1000	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=NA12877_ch_T0000528;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_G0000151;transcript_name=NA12877_ch_T0000528;gene_name=ENSG00000309700;ID=NA12877_ch_T0000528;Name=ENSG00000309700
NA12877_chrY	CAT	exon	8207211	8207452	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=NA12877_ch_T0000528;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000528;transcript_name=NA12877_ch_T0000528;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000528:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8207453	8214687	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=NA12877_ch_T0000528;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000528;transcript_name=NA12877_ch_T0000528;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000528:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8214688	8214762	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=NA12877_ch_T0000528;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000528;transcript_name=NA12877_ch_T0000528;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000528:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8214763	8217060	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=NA12877_ch_T0000528;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000528;transcript_name=NA12877_ch_T0000528;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000528:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8217061	8217397	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=NA12877_ch_T0000528;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000528;transcript_name=NA12877_ch_T0000528;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000528:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8207211	8217262	1000	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=NA12877_ch_T0000529;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_G0000151;transcript_name=NA12877_ch_T0000529;gene_name=ENSG00000309700;ID=NA12877_ch_T0000529;Name=ENSG00000309700
NA12877_chrY	CAT	exon	8207211	8207452	.	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=NA12877_ch_T0000529;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000529;transcript_name=NA12877_ch_T0000529;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000529:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8207453	8217060	.	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=NA12877_ch_T0000529;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000529;transcript_name=NA12877_ch_T0000529;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000529:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8217061	8217262	.	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=NA12877_ch_T0000529;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000529;transcript_name=NA12877_ch_T0000529;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000529:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8207212	8213853	1000	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=NA12877_ch_T0000530;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_G0000151;transcript_name=NA12877_ch_T0000530;gene_name=ENSG00000309700;ID=NA12877_ch_T0000530;Name=ENSG00000309700
NA12877_chrY	CAT	exon	8207212	8207452	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=NA12877_ch_T0000530;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000530;transcript_name=NA12877_ch_T0000530;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000530:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8207453	8209047	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=NA12877_ch_T0000530;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000530;transcript_name=NA12877_ch_T0000530;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000530:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8209048	8209086	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=NA12877_ch_T0000530;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000530;transcript_name=NA12877_ch_T0000530;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000530:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8209087	8213560	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=NA12877_ch_T0000530;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000530;transcript_name=NA12877_ch_T0000530;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000530:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8213561	8213853	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=NA12877_ch_T0000530;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000530;transcript_name=NA12877_ch_T0000530;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000530:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8211942	8218995	1000	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=NA12877_ch_T0000531;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_G0000151;transcript_name=NA12877_ch_T0000531;gene_name=ENSG00000309700;ID=NA12877_ch_T0000531;Name=ENSG00000309700
NA12877_chrY	CAT	exon	8211942	8212406	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=NA12877_ch_T0000531;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000531;transcript_name=NA12877_ch_T0000531;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000531:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8212407	8213560	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=NA12877_ch_T0000531;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000531;transcript_name=NA12877_ch_T0000531;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000531:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8213561	8213709	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=NA12877_ch_T0000531;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000531;transcript_name=NA12877_ch_T0000531;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000531:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8213710	8214687	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=NA12877_ch_T0000531;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000531;transcript_name=NA12877_ch_T0000531;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000531:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8214688	8214762	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=NA12877_ch_T0000531;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000531;transcript_name=NA12877_ch_T0000531;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000531:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8214763	8217060	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=NA12877_ch_T0000531;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000531;transcript_name=NA12877_ch_T0000531;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000531:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8217061	8217144	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=NA12877_ch_T0000531;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000531;transcript_name=NA12877_ch_T0000531;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000531:3;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8217145	8218783	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=NA12877_ch_T0000531;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000531;transcript_name=NA12877_ch_T0000531;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000531:3;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8218784	8218995	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=NA12877_ch_T0000531;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000531;transcript_name=NA12877_ch_T0000531;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000531:4;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8211942	8213859	1000	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=NA12877_ch_T0000532;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_G0000151;transcript_name=NA12877_ch_T0000532;gene_name=ENSG00000309700;ID=NA12877_ch_T0000532;Name=ENSG00000309700
NA12877_chrY	CAT	exon	8211942	8212406	.	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=NA12877_ch_T0000532;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000532;transcript_name=NA12877_ch_T0000532;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000532:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8212407	8213560	.	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=NA12877_ch_T0000532;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000532;transcript_name=NA12877_ch_T0000532;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000532:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8213561	8213859	.	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=NA12877_ch_T0000532;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000532;transcript_name=NA12877_ch_T0000532;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000532:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8211945	8217230	1000	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=NA12877_ch_T0000533;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_G0000151;transcript_name=NA12877_ch_T0000533;gene_name=ENSG00000309700;ID=NA12877_ch_T0000533;Name=ENSG00000309700
NA12877_chrY	CAT	exon	8211945	8212406	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=NA12877_ch_T0000533;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000533;transcript_name=NA12877_ch_T0000533;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000533:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8212407	8213560	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=NA12877_ch_T0000533;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000533;transcript_name=NA12877_ch_T0000533;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000533:0;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8213561	8213709	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=NA12877_ch_T0000533;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000533;transcript_name=NA12877_ch_T0000533;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000533:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8213710	8214687	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=NA12877_ch_T0000533;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000533;transcript_name=NA12877_ch_T0000533;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000533:1;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8214688	8214762	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=NA12877_ch_T0000533;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000533;transcript_name=NA12877_ch_T0000533;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000533:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8214763	8217060	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=NA12877_ch_T0000533;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000533;transcript_name=NA12877_ch_T0000533;gene_name=ENSG00000309700;ID=intron:NA12877_ch_T0000533:2;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8217061	8217230	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=NA12877_ch_T0000533;gene_id=NA12877_ch_G0000151;Parent=NA12877_ch_T0000533;transcript_name=NA12877_ch_T0000533;gene_name=ENSG00000309700;ID=exon:NA12877_ch_T0000533:3;Name=ENSG00000309700;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8222391	8250716	.	-	.	source_gene_common_name=TTTY18;source_gene=ENSG00000233699.3;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;gene_id=NA12877_ch_G0000152;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=NA12877_ch_G0000152;Name=TTTY18
NA12877_chrY	CAT	transcript	8222391	8240781	1000	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_G0000152;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=NA12877_ch_T0000537;Name=TTTY18
NA12877_chrY	CAT	exon	8222391	8223229	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=exon:NA12877_ch_T0000537:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223230	8223517	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=intron:NA12877_ch_T0000537:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8223518	8223736	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=exon:NA12877_ch_T0000537:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223737	8226479	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=intron:NA12877_ch_T0000537:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8226480	8226534	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=exon:NA12877_ch_T0000537:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8226535	8228873	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=intron:NA12877_ch_T0000537:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8228874	8228958	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=exon:NA12877_ch_T0000537:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8228959	8233560	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=intron:NA12877_ch_T0000537:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8233561	8233766	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=exon:NA12877_ch_T0000537:4;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8233767	8234250	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=intron:NA12877_ch_T0000537:4;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8234251	8234328	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=exon:NA12877_ch_T0000537:5;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8234329	8240621	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=intron:NA12877_ch_T0000537:5;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8240622	8240781	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=NA12877_ch_T0000537;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000537;transcript_name=NA12877_ch_T0000537;gene_name=TTTY18;ID=exon:NA12877_ch_T0000537:6;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8222394	8231277	1000	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=NA12877_ch_T0000538;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_G0000152;transcript_name=NA12877_ch_T0000538;gene_name=TTTY18;ID=NA12877_ch_T0000538;Name=TTTY18
NA12877_chrY	CAT	exon	8222394	8223229	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=NA12877_ch_T0000538;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000538;transcript_name=NA12877_ch_T0000538;gene_name=TTTY18;ID=exon:NA12877_ch_T0000538:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223230	8223517	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=NA12877_ch_T0000538;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000538;transcript_name=NA12877_ch_T0000538;gene_name=TTTY18;ID=intron:NA12877_ch_T0000538:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8223518	8223736	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=NA12877_ch_T0000538;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000538;transcript_name=NA12877_ch_T0000538;gene_name=TTTY18;ID=exon:NA12877_ch_T0000538:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223737	8226479	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=NA12877_ch_T0000538;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000538;transcript_name=NA12877_ch_T0000538;gene_name=TTTY18;ID=intron:NA12877_ch_T0000538:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8226480	8226534	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=NA12877_ch_T0000538;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000538;transcript_name=NA12877_ch_T0000538;gene_name=TTTY18;ID=exon:NA12877_ch_T0000538:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8226535	8228873	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=NA12877_ch_T0000538;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000538;transcript_name=NA12877_ch_T0000538;gene_name=TTTY18;ID=intron:NA12877_ch_T0000538:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8228874	8228958	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=NA12877_ch_T0000538;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000538;transcript_name=NA12877_ch_T0000538;gene_name=TTTY18;ID=exon:NA12877_ch_T0000538:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8228959	8231067	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=NA12877_ch_T0000538;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000538;transcript_name=NA12877_ch_T0000538;gene_name=TTTY18;ID=intron:NA12877_ch_T0000538:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8231068	8231277	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=NA12877_ch_T0000538;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000538;transcript_name=NA12877_ch_T0000538;gene_name=TTTY18;ID=exon:NA12877_ch_T0000538:4;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8222916	8231277	1000	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=NA12877_ch_T0000539;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_G0000152;transcript_name=NA12877_ch_T0000539;gene_name=TTTY18;ID=NA12877_ch_T0000539;Name=TTTY18
NA12877_chrY	CAT	exon	8222916	8223229	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=NA12877_ch_T0000539;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000539;transcript_name=NA12877_ch_T0000539;gene_name=TTTY18;ID=exon:NA12877_ch_T0000539:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223230	8223517	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=NA12877_ch_T0000539;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000539;transcript_name=NA12877_ch_T0000539;gene_name=TTTY18;ID=intron:NA12877_ch_T0000539:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8223518	8223736	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=NA12877_ch_T0000539;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000539;transcript_name=NA12877_ch_T0000539;gene_name=TTTY18;ID=exon:NA12877_ch_T0000539:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223737	8226479	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=NA12877_ch_T0000539;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000539;transcript_name=NA12877_ch_T0000539;gene_name=TTTY18;ID=intron:NA12877_ch_T0000539:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8226480	8226534	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=NA12877_ch_T0000539;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000539;transcript_name=NA12877_ch_T0000539;gene_name=TTTY18;ID=exon:NA12877_ch_T0000539:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8226535	8231067	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=NA12877_ch_T0000539;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000539;transcript_name=NA12877_ch_T0000539;gene_name=TTTY18;ID=intron:NA12877_ch_T0000539:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8231068	8231277	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=NA12877_ch_T0000539;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000539;transcript_name=NA12877_ch_T0000539;gene_name=TTTY18;ID=exon:NA12877_ch_T0000539:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8222920	8231242	1000	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=NA12877_ch_T0000540;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_G0000152;transcript_name=NA12877_ch_T0000540;gene_name=TTTY18;ID=NA12877_ch_T0000540;Name=TTTY18
NA12877_chrY	CAT	exon	8222920	8223229	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=NA12877_ch_T0000540;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000540;transcript_name=NA12877_ch_T0000540;gene_name=TTTY18;ID=exon:NA12877_ch_T0000540:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223230	8223517	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=NA12877_ch_T0000540;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000540;transcript_name=NA12877_ch_T0000540;gene_name=TTTY18;ID=intron:NA12877_ch_T0000540:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8223518	8223736	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=NA12877_ch_T0000540;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000540;transcript_name=NA12877_ch_T0000540;gene_name=TTTY18;ID=exon:NA12877_ch_T0000540:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223737	8225318	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=NA12877_ch_T0000540;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000540;transcript_name=NA12877_ch_T0000540;gene_name=TTTY18;ID=intron:NA12877_ch_T0000540:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8225319	8225454	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=NA12877_ch_T0000540;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000540;transcript_name=NA12877_ch_T0000540;gene_name=TTTY18;ID=exon:NA12877_ch_T0000540:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8225455	8226479	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=NA12877_ch_T0000540;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000540;transcript_name=NA12877_ch_T0000540;gene_name=TTTY18;ID=intron:NA12877_ch_T0000540:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8226480	8226534	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=NA12877_ch_T0000540;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000540;transcript_name=NA12877_ch_T0000540;gene_name=TTTY18;ID=exon:NA12877_ch_T0000540:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8226535	8228873	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=NA12877_ch_T0000540;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000540;transcript_name=NA12877_ch_T0000540;gene_name=TTTY18;ID=intron:NA12877_ch_T0000540:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8228874	8228958	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=NA12877_ch_T0000540;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000540;transcript_name=NA12877_ch_T0000540;gene_name=TTTY18;ID=exon:NA12877_ch_T0000540:4;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8228959	8231067	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=NA12877_ch_T0000540;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000540;transcript_name=NA12877_ch_T0000540;gene_name=TTTY18;ID=intron:NA12877_ch_T0000540:4;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8231068	8231242	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=NA12877_ch_T0000540;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000540;transcript_name=NA12877_ch_T0000540;gene_name=TTTY18;ID=exon:NA12877_ch_T0000540:5;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8222920	8231239	1000	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=NA12877_ch_T0000541;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_G0000152;transcript_name=NA12877_ch_T0000541;gene_name=TTTY18;ID=NA12877_ch_T0000541;Name=TTTY18
NA12877_chrY	CAT	exon	8222920	8223229	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=NA12877_ch_T0000541;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000541;transcript_name=NA12877_ch_T0000541;gene_name=TTTY18;ID=exon:NA12877_ch_T0000541:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223230	8226479	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=NA12877_ch_T0000541;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000541;transcript_name=NA12877_ch_T0000541;gene_name=TTTY18;ID=intron:NA12877_ch_T0000541:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8226480	8226534	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=NA12877_ch_T0000541;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000541;transcript_name=NA12877_ch_T0000541;gene_name=TTTY18;ID=exon:NA12877_ch_T0000541:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8226535	8228873	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=NA12877_ch_T0000541;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000541;transcript_name=NA12877_ch_T0000541;gene_name=TTTY18;ID=intron:NA12877_ch_T0000541:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8228874	8228958	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=NA12877_ch_T0000541;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000541;transcript_name=NA12877_ch_T0000541;gene_name=TTTY18;ID=exon:NA12877_ch_T0000541:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8228959	8231067	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=NA12877_ch_T0000541;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000541;transcript_name=NA12877_ch_T0000541;gene_name=TTTY18;ID=intron:NA12877_ch_T0000541:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8231068	8231239	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=NA12877_ch_T0000541;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000541;transcript_name=NA12877_ch_T0000541;gene_name=TTTY18;ID=exon:NA12877_ch_T0000541:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8222922	8250682	1000	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=NA12877_ch_T0000542;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_G0000152;transcript_name=NA12877_ch_T0000542;gene_name=TTTY18;ID=NA12877_ch_T0000542;Name=TTTY18
NA12877_chrY	CAT	exon	8222922	8223229	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=NA12877_ch_T0000542;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000542;transcript_name=NA12877_ch_T0000542;gene_name=TTTY18;ID=exon:NA12877_ch_T0000542:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223230	8223517	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=NA12877_ch_T0000542;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000542;transcript_name=NA12877_ch_T0000542;gene_name=TTTY18;ID=intron:NA12877_ch_T0000542:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8223518	8223736	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=NA12877_ch_T0000542;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000542;transcript_name=NA12877_ch_T0000542;gene_name=TTTY18;ID=exon:NA12877_ch_T0000542:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223737	8226479	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=NA12877_ch_T0000542;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000542;transcript_name=NA12877_ch_T0000542;gene_name=TTTY18;ID=intron:NA12877_ch_T0000542:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8226480	8226534	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=NA12877_ch_T0000542;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000542;transcript_name=NA12877_ch_T0000542;gene_name=TTTY18;ID=exon:NA12877_ch_T0000542:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8226535	8233560	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=NA12877_ch_T0000542;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000542;transcript_name=NA12877_ch_T0000542;gene_name=TTTY18;ID=intron:NA12877_ch_T0000542:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8233561	8233766	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=NA12877_ch_T0000542;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000542;transcript_name=NA12877_ch_T0000542;gene_name=TTTY18;ID=exon:NA12877_ch_T0000542:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8233767	8234250	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=NA12877_ch_T0000542;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000542;transcript_name=NA12877_ch_T0000542;gene_name=TTTY18;ID=intron:NA12877_ch_T0000542:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8234251	8234328	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=NA12877_ch_T0000542;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000542;transcript_name=NA12877_ch_T0000542;gene_name=TTTY18;ID=exon:NA12877_ch_T0000542:4;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8234329	8250509	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=NA12877_ch_T0000542;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000542;transcript_name=NA12877_ch_T0000542;gene_name=TTTY18;ID=intron:NA12877_ch_T0000542:4;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8250510	8250682	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=NA12877_ch_T0000542;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000542;transcript_name=NA12877_ch_T0000542;gene_name=TTTY18;ID=exon:NA12877_ch_T0000542:5;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8222922	8225518	1000	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=NA12877_ch_T0000543;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_G0000152;transcript_name=NA12877_ch_T0000543;gene_name=TTTY18;ID=NA12877_ch_T0000543;Name=TTTY18
NA12877_chrY	CAT	exon	8222922	8223229	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=NA12877_ch_T0000543;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000543;transcript_name=NA12877_ch_T0000543;gene_name=TTTY18;ID=exon:NA12877_ch_T0000543:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223230	8223517	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=NA12877_ch_T0000543;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000543;transcript_name=NA12877_ch_T0000543;gene_name=TTTY18;ID=intron:NA12877_ch_T0000543:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8223518	8223736	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=NA12877_ch_T0000543;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000543;transcript_name=NA12877_ch_T0000543;gene_name=TTTY18;ID=exon:NA12877_ch_T0000543:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8223737	8225318	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=NA12877_ch_T0000543;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000543;transcript_name=NA12877_ch_T0000543;gene_name=TTTY18;ID=intron:NA12877_ch_T0000543:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8225319	8225518	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=NA12877_ch_T0000543;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000543;transcript_name=NA12877_ch_T0000543;gene_name=TTTY18;ID=exon:NA12877_ch_T0000543:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8226982	8231273	1000	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=NA12877_ch_T0000545;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_G0000152;transcript_name=NA12877_ch_T0000545;gene_name=TTTY18;ID=NA12877_ch_T0000545;Name=TTTY18
NA12877_chrY	CAT	exon	8226982	8227163	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=NA12877_ch_T0000545;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000545;transcript_name=NA12877_ch_T0000545;gene_name=TTTY18;ID=exon:NA12877_ch_T0000545:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8227164	8228873	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=NA12877_ch_T0000545;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000545;transcript_name=NA12877_ch_T0000545;gene_name=TTTY18;ID=intron:NA12877_ch_T0000545:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8228874	8228958	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=NA12877_ch_T0000545;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000545;transcript_name=NA12877_ch_T0000545;gene_name=TTTY18;ID=exon:NA12877_ch_T0000545:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8228959	8231067	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=NA12877_ch_T0000545;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000545;transcript_name=NA12877_ch_T0000545;gene_name=TTTY18;ID=intron:NA12877_ch_T0000545:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8231068	8231273	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=NA12877_ch_T0000545;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000545;transcript_name=NA12877_ch_T0000545;gene_name=TTTY18;ID=exon:NA12877_ch_T0000545:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8226983	8231276	1000	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=NA12877_ch_T0000546;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_G0000152;transcript_name=NA12877_ch_T0000546;gene_name=TTTY18;ID=NA12877_ch_T0000546;Name=TTTY18
NA12877_chrY	CAT	exon	8226983	8227230	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=NA12877_ch_T0000546;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000546;transcript_name=NA12877_ch_T0000546;gene_name=TTTY18;ID=exon:NA12877_ch_T0000546:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8227231	8228873	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=NA12877_ch_T0000546;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000546;transcript_name=NA12877_ch_T0000546;gene_name=TTTY18;ID=intron:NA12877_ch_T0000546:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8228874	8228958	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=NA12877_ch_T0000546;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000546;transcript_name=NA12877_ch_T0000546;gene_name=TTTY18;ID=exon:NA12877_ch_T0000546:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8228959	8231067	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=NA12877_ch_T0000546;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000546;transcript_name=NA12877_ch_T0000546;gene_name=TTTY18;ID=intron:NA12877_ch_T0000546:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8231068	8231276	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=NA12877_ch_T0000546;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000546;transcript_name=NA12877_ch_T0000546;gene_name=TTTY18;ID=exon:NA12877_ch_T0000546:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8226985	8235119	1000	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=NA12877_ch_T0000547;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_G0000152;transcript_name=NA12877_ch_T0000547;gene_name=TTTY18;ID=NA12877_ch_T0000547;Name=TTTY18
NA12877_chrY	CAT	exon	8226985	8227163	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=NA12877_ch_T0000547;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000547;transcript_name=NA12877_ch_T0000547;gene_name=TTTY18;ID=exon:NA12877_ch_T0000547:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8227164	8228873	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=NA12877_ch_T0000547;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000547;transcript_name=NA12877_ch_T0000547;gene_name=TTTY18;ID=intron:NA12877_ch_T0000547:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8228874	8228958	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=NA12877_ch_T0000547;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000547;transcript_name=NA12877_ch_T0000547;gene_name=TTTY18;ID=exon:NA12877_ch_T0000547:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8228959	8233560	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=NA12877_ch_T0000547;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000547;transcript_name=NA12877_ch_T0000547;gene_name=TTTY18;ID=intron:NA12877_ch_T0000547:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8233561	8233766	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=NA12877_ch_T0000547;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000547;transcript_name=NA12877_ch_T0000547;gene_name=TTTY18;ID=exon:NA12877_ch_T0000547:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8233767	8234250	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=NA12877_ch_T0000547;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000547;transcript_name=NA12877_ch_T0000547;gene_name=TTTY18;ID=intron:NA12877_ch_T0000547:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8234251	8234328	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=NA12877_ch_T0000547;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000547;transcript_name=NA12877_ch_T0000547;gene_name=TTTY18;ID=exon:NA12877_ch_T0000547:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8234329	8234909	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=NA12877_ch_T0000547;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000547;transcript_name=NA12877_ch_T0000547;gene_name=TTTY18;ID=intron:NA12877_ch_T0000547:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8234910	8235119	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=NA12877_ch_T0000547;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000547;transcript_name=NA12877_ch_T0000547;gene_name=TTTY18;ID=exon:NA12877_ch_T0000547:4;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8233123	8250697	1000	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=NA12877_ch_T0000548;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_G0000152;transcript_name=NA12877_ch_T0000548;gene_name=TTTY18;ID=NA12877_ch_T0000548;Name=TTTY18
NA12877_chrY	CAT	exon	8233123	8233198	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=NA12877_ch_T0000548;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000548;transcript_name=NA12877_ch_T0000548;gene_name=TTTY18;ID=exon:NA12877_ch_T0000548:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8233199	8233560	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=NA12877_ch_T0000548;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000548;transcript_name=NA12877_ch_T0000548;gene_name=TTTY18;ID=intron:NA12877_ch_T0000548:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8233561	8233766	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=NA12877_ch_T0000548;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000548;transcript_name=NA12877_ch_T0000548;gene_name=TTTY18;ID=exon:NA12877_ch_T0000548:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8233767	8234250	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=NA12877_ch_T0000548;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000548;transcript_name=NA12877_ch_T0000548;gene_name=TTTY18;ID=intron:NA12877_ch_T0000548:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8234251	8234328	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=NA12877_ch_T0000548;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000548;transcript_name=NA12877_ch_T0000548;gene_name=TTTY18;ID=exon:NA12877_ch_T0000548:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8234329	8234909	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=NA12877_ch_T0000548;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000548;transcript_name=NA12877_ch_T0000548;gene_name=TTTY18;ID=intron:NA12877_ch_T0000548:2;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8234910	8235126	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=NA12877_ch_T0000548;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000548;transcript_name=NA12877_ch_T0000548;gene_name=TTTY18;ID=exon:NA12877_ch_T0000548:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8235127	8250509	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=NA12877_ch_T0000548;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000548;transcript_name=NA12877_ch_T0000548;gene_name=TTTY18;ID=intron:NA12877_ch_T0000548:3;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8250510	8250697	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=NA12877_ch_T0000548;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000548;transcript_name=NA12877_ch_T0000548;gene_name=TTTY18;ID=exon:NA12877_ch_T0000548:4;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8243901	8250716	1000	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=NA12877_ch_T0000549;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_G0000152;transcript_name=NA12877_ch_T0000549;gene_name=TTTY18;ID=NA12877_ch_T0000549;Name=TTTY18
NA12877_chrY	CAT	exon	8243901	8244048	.	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=NA12877_ch_T0000549;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000549;transcript_name=NA12877_ch_T0000549;gene_name=TTTY18;ID=exon:NA12877_ch_T0000549:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8244049	8250509	.	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=NA12877_ch_T0000549;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000549;transcript_name=NA12877_ch_T0000549;gene_name=TTTY18;ID=intron:NA12877_ch_T0000549:0;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8250510	8250716	.	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=NA12877_ch_T0000549;gene_id=NA12877_ch_G0000152;Parent=NA12877_ch_T0000549;transcript_name=NA12877_ch_T0000549;gene_name=TTTY18;ID=exon:NA12877_ch_T0000549:1;Name=TTTY18;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8244276	8245087	.	+	.	source_gene_common_name=TTTY19;source_gene=ENSG00000232419.1;gene_id=NA12877_ch_G0000153;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=NA12877_ch_G0000153;Name=TTTY19
NA12877_chrY	CAT	transcript	8244276	8245087	1000	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=NA12877_ch_T0000550;gene_id=NA12877_ch_G0000153;Parent=NA12877_ch_G0000153;transcript_name=NA12877_ch_T0000550;gene_name=TTTY19;ID=NA12877_ch_T0000550;Name=TTTY19
NA12877_chrY	CAT	exon	8244276	8244363	.	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=NA12877_ch_T0000550;gene_id=NA12877_ch_G0000153;Parent=NA12877_ch_T0000550;transcript_name=NA12877_ch_T0000550;gene_name=TTTY19;ID=exon:NA12877_ch_T0000550:0;Name=TTTY19;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8244364	8244906	.	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=NA12877_ch_T0000550;gene_id=NA12877_ch_G0000153;Parent=NA12877_ch_T0000550;transcript_name=NA12877_ch_T0000550;gene_name=TTTY19;ID=intron:NA12877_ch_T0000550:0;Name=TTTY19;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8244907	8245087	.	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=NA12877_ch_T0000550;gene_id=NA12877_ch_G0000153;Parent=NA12877_ch_T0000550;transcript_name=NA12877_ch_T0000550;gene_name=TTTY19;ID=exon:NA12877_ch_T0000550:1;Name=TTTY19;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8261569	8279053	.	-	.	source_gene_common_name=ENSG00000309903;source_gene=ENSG00000309903.1;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;gene_id=NA12877_ch_G0000154;gene_biotype=lncRNA;gene_name=ENSG00000309903;gene_sources=liftoff;ID=NA12877_ch_G0000154;Name=ENSG00000309903
NA12877_chrY	CAT	transcript	8261569	8264088	1000	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=NA12877_ch_T0000551;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_G0000154;transcript_name=NA12877_ch_T0000551;gene_name=ENSG00000309903;ID=NA12877_ch_T0000551;Name=ENSG00000309903
NA12877_chrY	CAT	exon	8261569	8261885	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=NA12877_ch_T0000551;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000551;transcript_name=NA12877_ch_T0000551;gene_name=ENSG00000309903;ID=exon:NA12877_ch_T0000551:0;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8261886	8261982	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=NA12877_ch_T0000551;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000551;transcript_name=NA12877_ch_T0000551;gene_name=ENSG00000309903;ID=intron:NA12877_ch_T0000551:0;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8261983	8262078	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=NA12877_ch_T0000551;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000551;transcript_name=NA12877_ch_T0000551;gene_name=ENSG00000309903;ID=exon:NA12877_ch_T0000551:1;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8262079	8262168	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=NA12877_ch_T0000551;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000551;transcript_name=NA12877_ch_T0000551;gene_name=ENSG00000309903;ID=intron:NA12877_ch_T0000551:1;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8262169	8262431	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=NA12877_ch_T0000551;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000551;transcript_name=NA12877_ch_T0000551;gene_name=ENSG00000309903;ID=exon:NA12877_ch_T0000551:2;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8262432	8263899	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=NA12877_ch_T0000551;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000551;transcript_name=NA12877_ch_T0000551;gene_name=ENSG00000309903;ID=intron:NA12877_ch_T0000551:2;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8263900	8264088	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=NA12877_ch_T0000551;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000551;transcript_name=NA12877_ch_T0000551;gene_name=ENSG00000309903;ID=exon:NA12877_ch_T0000551:3;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8261572	8279053	1000	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=NA12877_ch_T0000552;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_G0000154;transcript_name=NA12877_ch_T0000552;gene_name=ENSG00000309903;ID=NA12877_ch_T0000552;Name=ENSG00000309903
NA12877_chrY	CAT	exon	8261572	8261885	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=NA12877_ch_T0000552;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000552;transcript_name=NA12877_ch_T0000552;gene_name=ENSG00000309903;ID=exon:NA12877_ch_T0000552:0;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8261886	8261982	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=NA12877_ch_T0000552;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000552;transcript_name=NA12877_ch_T0000552;gene_name=ENSG00000309903;ID=intron:NA12877_ch_T0000552:0;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8261983	8262078	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=NA12877_ch_T0000552;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000552;transcript_name=NA12877_ch_T0000552;gene_name=ENSG00000309903;ID=exon:NA12877_ch_T0000552:1;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8262079	8262168	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=NA12877_ch_T0000552;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000552;transcript_name=NA12877_ch_T0000552;gene_name=ENSG00000309903;ID=intron:NA12877_ch_T0000552:1;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8262169	8262431	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=NA12877_ch_T0000552;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000552;transcript_name=NA12877_ch_T0000552;gene_name=ENSG00000309903;ID=exon:NA12877_ch_T0000552:2;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8262432	8273165	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=NA12877_ch_T0000552;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000552;transcript_name=NA12877_ch_T0000552;gene_name=ENSG00000309903;ID=intron:NA12877_ch_T0000552:2;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8273166	8273265	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=NA12877_ch_T0000552;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000552;transcript_name=NA12877_ch_T0000552;gene_name=ENSG00000309903;ID=exon:NA12877_ch_T0000552:3;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8273266	8278873	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=NA12877_ch_T0000552;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000552;transcript_name=NA12877_ch_T0000552;gene_name=ENSG00000309903;ID=intron:NA12877_ch_T0000552:3;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8278874	8279053	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=NA12877_ch_T0000552;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000552;transcript_name=NA12877_ch_T0000552;gene_name=ENSG00000309903;ID=exon:NA12877_ch_T0000552:4;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8262120	8264065	1000	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=NA12877_ch_T0000553;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_G0000154;transcript_name=NA12877_ch_T0000553;gene_name=ENSG00000309903;ID=NA12877_ch_T0000553;Name=ENSG00000309903
NA12877_chrY	CAT	exon	8262120	8262431	.	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=NA12877_ch_T0000553;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000553;transcript_name=NA12877_ch_T0000553;gene_name=ENSG00000309903;ID=exon:NA12877_ch_T0000553:0;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8262432	8263899	.	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=NA12877_ch_T0000553;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000553;transcript_name=NA12877_ch_T0000553;gene_name=ENSG00000309903;ID=intron:NA12877_ch_T0000553:0;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8263900	8264065	.	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=NA12877_ch_T0000553;gene_id=NA12877_ch_G0000154;Parent=NA12877_ch_T0000553;transcript_name=NA12877_ch_T0000553;gene_name=ENSG00000309903;ID=exon:NA12877_ch_T0000553:1;Name=ENSG00000309903;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8323119	8357271	.	-	.	source_gene_common_name=TTTY11;source_gene=ENSG00000290381.2;gene_id=NA12877_ch_G0000155;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=NA12877_ch_G0000155;Name=TTTY11
NA12877_chrY	CAT	transcript	8323119	8357190	1000	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000554;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_G0000155;transcript_name=NA12877_ch_T0000554;gene_name=TTTY11;ID=NA12877_ch_T0000554;Name=TTTY11
NA12877_chrY	CAT	exon	8323119	8323215	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000554;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_T0000554;transcript_name=NA12877_ch_T0000554;gene_name=TTTY11;ID=exon:NA12877_ch_T0000554:0;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8323216	8323696	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000554;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_T0000554;transcript_name=NA12877_ch_T0000554;gene_name=TTTY11;ID=intron:NA12877_ch_T0000554:0;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8323697	8324012	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000554;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_T0000554;transcript_name=NA12877_ch_T0000554;gene_name=TTTY11;ID=exon:NA12877_ch_T0000554:1;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8324013	8328808	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000554;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_T0000554;transcript_name=NA12877_ch_T0000554;gene_name=TTTY11;ID=intron:NA12877_ch_T0000554:1;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8328809	8329111	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000554;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_T0000554;transcript_name=NA12877_ch_T0000554;gene_name=TTTY11;ID=exon:NA12877_ch_T0000554:2;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8329112	8334669	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000554;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_T0000554;transcript_name=NA12877_ch_T0000554;gene_name=TTTY11;ID=intron:NA12877_ch_T0000554:2;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8334670	8334753	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000554;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_T0000554;transcript_name=NA12877_ch_T0000554;gene_name=TTTY11;ID=exon:NA12877_ch_T0000554:3;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8334754	8357153	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000554;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_T0000554;transcript_name=NA12877_ch_T0000554;gene_name=TTTY11;ID=intron:NA12877_ch_T0000554:3;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8357154	8357190	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000554;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_T0000554;transcript_name=NA12877_ch_T0000554;gene_name=TTTY11;ID=exon:NA12877_ch_T0000554:4;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8355284	8357271	1000	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000556;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_G0000155;transcript_name=NA12877_ch_T0000556;gene_name=TTTY11;ID=NA12877_ch_T0000556;Name=TTTY11
NA12877_chrY	CAT	exon	8355284	8355737	.	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000556;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_T0000556;transcript_name=NA12877_ch_T0000556;gene_name=TTTY11;ID=exon:NA12877_ch_T0000556:0;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8355738	8357153	.	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000556;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_T0000556;transcript_name=NA12877_ch_T0000556;gene_name=TTTY11;ID=intron:NA12877_ch_T0000556:0;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8357154	8357271	.	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000556;gene_id=NA12877_ch_G0000155;Parent=NA12877_ch_T0000556;transcript_name=NA12877_ch_T0000556;gene_name=TTTY11;ID=exon:NA12877_ch_T0000556:1;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8328809	8329111	.	-	.	source_gene_common_name=TTTY11;source_gene=ENSG00000180910.9;gene_id=NA12877_ch_G0000156;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TTTY11;gene_sources=liftoff;ID=NA12877_ch_G0000156;Name=TTTY11
NA12877_chrY	CAT	transcript	8328809	8329111	1000	-	.	source_transcript=ENST00000651367.1;source_transcript_name=TTTY11-201;source_gene=ENSG00000180910.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000180910.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000651367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000555;gene_id=NA12877_ch_G0000156;Parent=NA12877_ch_G0000156;transcript_name=NA12877_ch_T0000555;gene_name=TTTY11;ID=NA12877_ch_T0000555;Name=TTTY11
NA12877_chrY	CAT	exon	8328809	8329111	.	-	.	source_transcript=ENST00000651367.1;source_transcript_name=TTTY11-201;source_gene=ENSG00000180910.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000180910.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000651367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=NA12877_ch_T0000555;gene_id=NA12877_ch_G0000156;Parent=NA12877_ch_T0000555;transcript_name=NA12877_ch_T0000555;gene_name=TTTY11;ID=exon:NA12877_ch_T0000555:0;Name=TTTY11;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8441028	8443101	.	-	.	source_gene_common_name=ENSG00000228207;source_gene=ENSG00000228207.1;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;gene_id=NA12877_ch_G0000157;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000228207;gene_sources=liftoff;ID=NA12877_ch_G0000157;Name=ENSG00000228207
NA12877_chrY	CAT	transcript	8441028	8443101	1000	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=NA12877_ch_T0000557;gene_id=NA12877_ch_G0000157;Parent=NA12877_ch_G0000157;transcript_name=NA12877_ch_T0000557;gene_name=ENSG00000228207;ID=NA12877_ch_T0000557;Name=ENSG00000228207
NA12877_chrY	CAT	exon	8441028	8441083	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=NA12877_ch_T0000557;gene_id=NA12877_ch_G0000157;Parent=NA12877_ch_T0000557;transcript_name=NA12877_ch_T0000557;gene_name=ENSG00000228207;ID=exon:NA12877_ch_T0000557:0;Name=ENSG00000228207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8441084	8441194	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=NA12877_ch_T0000557;gene_id=NA12877_ch_G0000157;Parent=NA12877_ch_T0000557;transcript_name=NA12877_ch_T0000557;gene_name=ENSG00000228207;ID=intron:NA12877_ch_T0000557:0;Name=ENSG00000228207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8441195	8441338	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=NA12877_ch_T0000557;gene_id=NA12877_ch_G0000157;Parent=NA12877_ch_T0000557;transcript_name=NA12877_ch_T0000557;gene_name=ENSG00000228207;ID=exon:NA12877_ch_T0000557:1;Name=ENSG00000228207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8441339	8441425	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=NA12877_ch_T0000557;gene_id=NA12877_ch_G0000157;Parent=NA12877_ch_T0000557;transcript_name=NA12877_ch_T0000557;gene_name=ENSG00000228207;ID=intron:NA12877_ch_T0000557:1;Name=ENSG00000228207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8441426	8441564	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=NA12877_ch_T0000557;gene_id=NA12877_ch_G0000157;Parent=NA12877_ch_T0000557;transcript_name=NA12877_ch_T0000557;gene_name=ENSG00000228207;ID=exon:NA12877_ch_T0000557:2;Name=ENSG00000228207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8441565	8442815	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=NA12877_ch_T0000557;gene_id=NA12877_ch_G0000157;Parent=NA12877_ch_T0000557;transcript_name=NA12877_ch_T0000557;gene_name=ENSG00000228207;ID=intron:NA12877_ch_T0000557:2;Name=ENSG00000228207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8442816	8443101	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=NA12877_ch_T0000557;gene_id=NA12877_ch_G0000157;Parent=NA12877_ch_T0000557;transcript_name=NA12877_ch_T0000557;gene_name=ENSG00000228207;ID=exon:NA12877_ch_T0000557:3;Name=ENSG00000228207;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8446049	8455898	.	+	.	source_gene_common_name=ENSG00000173357;source_gene=ENSG00000173357.13;gene_id=NA12877_ch_G0000158;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000173357;gene_sources=liftoff;ID=NA12877_ch_G0000158;Name=ENSG00000173357
NA12877_chrY	CAT	transcript	8446049	8455898	1000	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_G0000158;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=NA12877_ch_T0000558;Name=ENSG00000173357
NA12877_chrY	CAT	exon	8446049	8446157	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=exon:NA12877_ch_T0000558:0;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8446158	8446918	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=intron:NA12877_ch_T0000558:0;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8446919	8447022	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=exon:NA12877_ch_T0000558:1;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8447023	8449707	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=intron:NA12877_ch_T0000558:1;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8449708	8449885	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=exon:NA12877_ch_T0000558:2;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8449886	8451770	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=intron:NA12877_ch_T0000558:2;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8451771	8451923	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=exon:NA12877_ch_T0000558:3;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8451924	8453917	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=intron:NA12877_ch_T0000558:3;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8453918	8454029	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=exon:NA12877_ch_T0000558:4;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8454030	8454908	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=intron:NA12877_ch_T0000558:4;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8454909	8455019	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=exon:NA12877_ch_T0000558:5;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8455020	8455100	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=intron:NA12877_ch_T0000558:5;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8455101	8455189	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=exon:NA12877_ch_T0000558:6;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8455190	8455595	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=intron:NA12877_ch_T0000558:6;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8455596	8455898	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=NA12877_ch_T0000558;gene_id=NA12877_ch_G0000158;Parent=NA12877_ch_T0000558;transcript_name=NA12877_ch_T0000558;gene_name=ENSG00000173357;ID=exon:NA12877_ch_T0000558:7;Name=ENSG00000173357;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8449773	8453980	.	+	.	source_gene_common_name=ENSG00000290342;source_gene=ENSG00000290342.1;gene_id=NA12877_ch_G0000159;gene_biotype=lncRNA;gene_name=ENSG00000290342;gene_sources=liftoff;ID=NA12877_ch_G0000159;Name=ENSG00000290342
NA12877_chrY	CAT	transcript	8449773	8453980	1000	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=NA12877_ch_T0000559;gene_id=NA12877_ch_G0000159;Parent=NA12877_ch_G0000159;transcript_name=NA12877_ch_T0000559;gene_name=ENSG00000290342;ID=NA12877_ch_T0000559;Name=ENSG00000290342
NA12877_chrY	CAT	exon	8449773	8449885	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=NA12877_ch_T0000559;gene_id=NA12877_ch_G0000159;Parent=NA12877_ch_T0000559;transcript_name=NA12877_ch_T0000559;gene_name=ENSG00000290342;ID=exon:NA12877_ch_T0000559:0;Name=ENSG00000290342;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8449886	8451770	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=NA12877_ch_T0000559;gene_id=NA12877_ch_G0000159;Parent=NA12877_ch_T0000559;transcript_name=NA12877_ch_T0000559;gene_name=ENSG00000290342;ID=intron:NA12877_ch_T0000559:0;Name=ENSG00000290342;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8451771	8451923	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=NA12877_ch_T0000559;gene_id=NA12877_ch_G0000159;Parent=NA12877_ch_T0000559;transcript_name=NA12877_ch_T0000559;gene_name=ENSG00000290342;ID=exon:NA12877_ch_T0000559:1;Name=ENSG00000290342;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8451924	8453917	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=NA12877_ch_T0000559;gene_id=NA12877_ch_G0000159;Parent=NA12877_ch_T0000559;transcript_name=NA12877_ch_T0000559;gene_name=ENSG00000290342;ID=intron:NA12877_ch_T0000559:1;Name=ENSG00000290342;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8453918	8453980	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=NA12877_ch_T0000559;gene_id=NA12877_ch_G0000159;Parent=NA12877_ch_T0000559;transcript_name=NA12877_ch_T0000559;gene_name=ENSG00000290342;ID=exon:NA12877_ch_T0000559:2;Name=ENSG00000290342;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8455096	8462528	.	-	.	source_gene_common_name=ENSG00000301122;source_gene=ENSG00000301122.1;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;gene_id=NA12877_ch_G0000160;gene_biotype=lncRNA;gene_name=ENSG00000301122;gene_sources=liftoff;ID=NA12877_ch_G0000160;Name=ENSG00000301122
NA12877_chrY	CAT	transcript	8455096	8458636	1000	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=NA12877_ch_T0000560;gene_id=NA12877_ch_G0000160;Parent=NA12877_ch_G0000160;transcript_name=NA12877_ch_T0000560;gene_name=ENSG00000301122;ID=NA12877_ch_T0000560;Name=ENSG00000301122
NA12877_chrY	CAT	exon	8455096	8455868	.	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=NA12877_ch_T0000560;gene_id=NA12877_ch_G0000160;Parent=NA12877_ch_T0000560;transcript_name=NA12877_ch_T0000560;gene_name=ENSG00000301122;ID=exon:NA12877_ch_T0000560:0;Name=ENSG00000301122;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8455869	8458110	.	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=NA12877_ch_T0000560;gene_id=NA12877_ch_G0000160;Parent=NA12877_ch_T0000560;transcript_name=NA12877_ch_T0000560;gene_name=ENSG00000301122;ID=intron:NA12877_ch_T0000560:0;Name=ENSG00000301122;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8458111	8458636	.	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=NA12877_ch_T0000560;gene_id=NA12877_ch_G0000160;Parent=NA12877_ch_T0000560;transcript_name=NA12877_ch_T0000560;gene_name=ENSG00000301122;ID=exon:NA12877_ch_T0000560:1;Name=ENSG00000301122;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8455502	8462528	1000	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=NA12877_ch_T0000561;gene_id=NA12877_ch_G0000160;Parent=NA12877_ch_G0000160;transcript_name=NA12877_ch_T0000561;gene_name=ENSG00000301122;ID=NA12877_ch_T0000561;Name=ENSG00000301122
NA12877_chrY	CAT	exon	8455502	8455868	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=NA12877_ch_T0000561;gene_id=NA12877_ch_G0000160;Parent=NA12877_ch_T0000561;transcript_name=NA12877_ch_T0000561;gene_name=ENSG00000301122;ID=exon:NA12877_ch_T0000561:0;Name=ENSG00000301122;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8455869	8458110	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=NA12877_ch_T0000561;gene_id=NA12877_ch_G0000160;Parent=NA12877_ch_T0000561;transcript_name=NA12877_ch_T0000561;gene_name=ENSG00000301122;ID=intron:NA12877_ch_T0000561:0;Name=ENSG00000301122;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8458111	8458688	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=NA12877_ch_T0000561;gene_id=NA12877_ch_G0000160;Parent=NA12877_ch_T0000561;transcript_name=NA12877_ch_T0000561;gene_name=ENSG00000301122;ID=exon:NA12877_ch_T0000561:1;Name=ENSG00000301122;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8458689	8462412	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=NA12877_ch_T0000561;gene_id=NA12877_ch_G0000160;Parent=NA12877_ch_T0000561;transcript_name=NA12877_ch_T0000561;gene_name=ENSG00000301122;ID=intron:NA12877_ch_T0000561:1;Name=ENSG00000301122;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8462413	8462528	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=NA12877_ch_T0000561;gene_id=NA12877_ch_G0000160;Parent=NA12877_ch_T0000561;transcript_name=NA12877_ch_T0000561;gene_name=ENSG00000301122;ID=exon:NA12877_ch_T0000561:2;Name=ENSG00000301122;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8470894	8471279	.	-	.	source_gene_common_name=ENSG00000273731;source_gene=ENSG00000273731.1;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;gene_id=NA12877_ch_G0000161;gene_biotype=processed_pseudogene;gene_name=ENSG00000273731;gene_sources=liftoff;ID=NA12877_ch_G0000161;Name=ENSG00000273731
NA12877_chrY	CAT	transcript	8470894	8471279	1000	-	.	source_transcript=ENST00000614700.1;source_transcript_name=ENST00000614700;source_gene=ENSG00000273731.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273731.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614700.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273731;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;transcript_id=NA12877_ch_T0000562;gene_id=NA12877_ch_G0000161;Parent=NA12877_ch_G0000161;transcript_name=NA12877_ch_T0000562;gene_name=ENSG00000273731;ID=NA12877_ch_T0000562;Name=ENSG00000273731
NA12877_chrY	CAT	exon	8470894	8471279	.	-	.	source_transcript=ENST00000614700.1;source_transcript_name=ENST00000614700;source_gene=ENSG00000273731.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273731.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614700.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273731;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;transcript_id=NA12877_ch_T0000562;gene_id=NA12877_ch_G0000161;Parent=NA12877_ch_T0000562;transcript_name=NA12877_ch_T0000562;gene_name=ENSG00000273731;ID=exon:NA12877_ch_T0000562:0;Name=ENSG00000273731;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8511609	8513953	.	-	.	source_gene_common_name=ENSG00000230025;source_gene=ENSG00000230025.1;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;gene_id=NA12877_ch_G0000162;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000230025;gene_sources=liftoff;ID=NA12877_ch_G0000162;Name=ENSG00000230025
NA12877_chrY	CAT	transcript	8511609	8513953	1000	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=NA12877_ch_T0000563;gene_id=NA12877_ch_G0000162;Parent=NA12877_ch_G0000162;transcript_name=NA12877_ch_T0000563;gene_name=ENSG00000230025;ID=NA12877_ch_T0000563;Name=ENSG00000230025
NA12877_chrY	CAT	exon	8511609	8511752	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=NA12877_ch_T0000563;gene_id=NA12877_ch_G0000162;Parent=NA12877_ch_T0000563;transcript_name=NA12877_ch_T0000563;gene_name=ENSG00000230025;ID=exon:NA12877_ch_T0000563:0;Name=ENSG00000230025;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8511753	8511844	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=NA12877_ch_T0000563;gene_id=NA12877_ch_G0000162;Parent=NA12877_ch_T0000563;transcript_name=NA12877_ch_T0000563;gene_name=ENSG00000230025;ID=intron:NA12877_ch_T0000563:0;Name=ENSG00000230025;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8511845	8511889	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=NA12877_ch_T0000563;gene_id=NA12877_ch_G0000162;Parent=NA12877_ch_T0000563;transcript_name=NA12877_ch_T0000563;gene_name=ENSG00000230025;ID=exon:NA12877_ch_T0000563:1;Name=ENSG00000230025;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8511890	8513584	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=NA12877_ch_T0000563;gene_id=NA12877_ch_G0000162;Parent=NA12877_ch_T0000563;transcript_name=NA12877_ch_T0000563;gene_name=ENSG00000230025;ID=intron:NA12877_ch_T0000563:1;Name=ENSG00000230025;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8513585	8513953	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=NA12877_ch_T0000563;gene_id=NA12877_ch_G0000162;Parent=NA12877_ch_T0000563;transcript_name=NA12877_ch_T0000563;gene_name=ENSG00000230025;ID=exon:NA12877_ch_T0000563:2;Name=ENSG00000230025;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8570451	8579845	.	+	.	source_gene_common_name=OFD1P3Y;source_gene=ENSG00000231988.1;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;gene_id=NA12877_ch_G0000163;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P3Y;gene_sources=liftoff;ID=NA12877_ch_G0000163;Name=OFD1P3Y
NA12877_chrY	CAT	transcript	8570451	8579845	1000	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=NA12877_ch_T0000564;gene_id=NA12877_ch_G0000163;Parent=NA12877_ch_G0000163;transcript_name=NA12877_ch_T0000564;gene_name=OFD1P3Y;ID=NA12877_ch_T0000564;Name=OFD1P3Y
NA12877_chrY	CAT	exon	8570451	8570587	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=NA12877_ch_T0000564;gene_id=NA12877_ch_G0000163;Parent=NA12877_ch_T0000564;transcript_name=NA12877_ch_T0000564;gene_name=OFD1P3Y;ID=exon:NA12877_ch_T0000564:0;Name=OFD1P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8570588	8570911	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=NA12877_ch_T0000564;gene_id=NA12877_ch_G0000163;Parent=NA12877_ch_T0000564;transcript_name=NA12877_ch_T0000564;gene_name=OFD1P3Y;ID=intron:NA12877_ch_T0000564:0;Name=OFD1P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8570912	8571086	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=NA12877_ch_T0000564;gene_id=NA12877_ch_G0000163;Parent=NA12877_ch_T0000564;transcript_name=NA12877_ch_T0000564;gene_name=OFD1P3Y;ID=exon:NA12877_ch_T0000564:1;Name=OFD1P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8571087	8574529	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=NA12877_ch_T0000564;gene_id=NA12877_ch_G0000163;Parent=NA12877_ch_T0000564;transcript_name=NA12877_ch_T0000564;gene_name=OFD1P3Y;ID=intron:NA12877_ch_T0000564:1;Name=OFD1P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8574530	8574645	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=NA12877_ch_T0000564;gene_id=NA12877_ch_G0000163;Parent=NA12877_ch_T0000564;transcript_name=NA12877_ch_T0000564;gene_name=OFD1P3Y;ID=exon:NA12877_ch_T0000564:2;Name=OFD1P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8574646	8576313	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=NA12877_ch_T0000564;gene_id=NA12877_ch_G0000163;Parent=NA12877_ch_T0000564;transcript_name=NA12877_ch_T0000564;gene_name=OFD1P3Y;ID=intron:NA12877_ch_T0000564:2;Name=OFD1P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8576314	8576387	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=NA12877_ch_T0000564;gene_id=NA12877_ch_G0000163;Parent=NA12877_ch_T0000564;transcript_name=NA12877_ch_T0000564;gene_name=OFD1P3Y;ID=exon:NA12877_ch_T0000564:3;Name=OFD1P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8576388	8577532	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=NA12877_ch_T0000564;gene_id=NA12877_ch_G0000163;Parent=NA12877_ch_T0000564;transcript_name=NA12877_ch_T0000564;gene_name=OFD1P3Y;ID=intron:NA12877_ch_T0000564:3;Name=OFD1P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8577533	8577624	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=NA12877_ch_T0000564;gene_id=NA12877_ch_G0000163;Parent=NA12877_ch_T0000564;transcript_name=NA12877_ch_T0000564;gene_name=OFD1P3Y;ID=exon:NA12877_ch_T0000564:4;Name=OFD1P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8577625	8579656	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=NA12877_ch_T0000564;gene_id=NA12877_ch_G0000163;Parent=NA12877_ch_T0000564;transcript_name=NA12877_ch_T0000564;gene_name=OFD1P3Y;ID=intron:NA12877_ch_T0000564:4;Name=OFD1P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8579657	8579845	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=NA12877_ch_T0000564;gene_id=NA12877_ch_G0000163;Parent=NA12877_ch_T0000564;transcript_name=NA12877_ch_T0000564;gene_name=OFD1P3Y;ID=exon:NA12877_ch_T0000564:5;Name=OFD1P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8655977	8657594	.	-	.	source_gene_common_name=CDY3P;source_gene=ENSG00000232235.1;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;gene_id=NA12877_ch_G0000164;gene_biotype=processed_pseudogene;gene_name=CDY3P;gene_sources=liftoff;ID=NA12877_ch_G0000164;Name=CDY3P
NA12877_chrY	CAT	transcript	8655977	8657594	1000	-	.	source_transcript=ENST00000454543.1;source_transcript_name=CDY3P-201;source_gene=ENSG00000232235.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232235.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454543.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY3P;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;transcript_id=NA12877_ch_T0000565;gene_id=NA12877_ch_G0000164;Parent=NA12877_ch_G0000164;transcript_name=NA12877_ch_T0000565;gene_name=CDY3P;ID=NA12877_ch_T0000565;Name=CDY3P
NA12877_chrY	CAT	exon	8655977	8657594	.	-	.	source_transcript=ENST00000454543.1;source_transcript_name=CDY3P-201;source_gene=ENSG00000232235.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232235.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454543.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY3P;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;transcript_id=NA12877_ch_T0000565;gene_id=NA12877_ch_G0000164;Parent=NA12877_ch_T0000565;transcript_name=NA12877_ch_T0000565;gene_name=CDY3P;ID=exon:NA12877_ch_T0000565:0;Name=CDY3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8673586	8675695	.	+	.	source_gene_common_name=USP9YP22;source_gene=ENSG00000224408.1;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;gene_id=NA12877_ch_G0000165;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP22;gene_sources=liftoff;ID=NA12877_ch_G0000165;Name=USP9YP22
NA12877_chrY	CAT	transcript	8673586	8675695	1000	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=NA12877_ch_T0000566;gene_id=NA12877_ch_G0000165;Parent=NA12877_ch_G0000165;transcript_name=NA12877_ch_T0000566;gene_name=USP9YP22;ID=NA12877_ch_T0000566;Name=USP9YP22
NA12877_chrY	CAT	exon	8673586	8673677	.	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=NA12877_ch_T0000566;gene_id=NA12877_ch_G0000165;Parent=NA12877_ch_T0000566;transcript_name=NA12877_ch_T0000566;gene_name=USP9YP22;ID=exon:NA12877_ch_T0000566:0;Name=USP9YP22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8673678	8675493	.	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=NA12877_ch_T0000566;gene_id=NA12877_ch_G0000165;Parent=NA12877_ch_T0000566;transcript_name=NA12877_ch_T0000566;gene_name=USP9YP22;ID=intron:NA12877_ch_T0000566:0;Name=USP9YP22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8675494	8675695	.	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=NA12877_ch_T0000566;gene_id=NA12877_ch_G0000165;Parent=NA12877_ch_T0000566;transcript_name=NA12877_ch_T0000566;gene_name=USP9YP22;ID=exon:NA12877_ch_T0000566:1;Name=USP9YP22;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8679521	8694512	.	-	.	source_gene_common_name=USP9YP4;source_gene=ENSG00000238154.1;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;gene_id=NA12877_ch_G0000166;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP4;gene_sources=liftoff;ID=NA12877_ch_G0000166;Name=USP9YP4
NA12877_chrY	CAT	transcript	8679521	8694512	1000	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=NA12877_ch_T0000567;gene_id=NA12877_ch_G0000166;Parent=NA12877_ch_G0000166;transcript_name=NA12877_ch_T0000567;gene_name=USP9YP4;ID=NA12877_ch_T0000567;Name=USP9YP4
NA12877_chrY	CAT	exon	8679521	8679644	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=NA12877_ch_T0000567;gene_id=NA12877_ch_G0000166;Parent=NA12877_ch_T0000567;transcript_name=NA12877_ch_T0000567;gene_name=USP9YP4;ID=exon:NA12877_ch_T0000567:0;Name=USP9YP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8679645	8680079	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=NA12877_ch_T0000567;gene_id=NA12877_ch_G0000166;Parent=NA12877_ch_T0000567;transcript_name=NA12877_ch_T0000567;gene_name=USP9YP4;ID=intron:NA12877_ch_T0000567:0;Name=USP9YP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8680080	8680964	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=NA12877_ch_T0000567;gene_id=NA12877_ch_G0000166;Parent=NA12877_ch_T0000567;transcript_name=NA12877_ch_T0000567;gene_name=USP9YP4;ID=exon:NA12877_ch_T0000567:1;Name=USP9YP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8680965	8683488	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=NA12877_ch_T0000567;gene_id=NA12877_ch_G0000166;Parent=NA12877_ch_T0000567;transcript_name=NA12877_ch_T0000567;gene_name=USP9YP4;ID=intron:NA12877_ch_T0000567:1;Name=USP9YP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8683489	8683612	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=NA12877_ch_T0000567;gene_id=NA12877_ch_G0000166;Parent=NA12877_ch_T0000567;transcript_name=NA12877_ch_T0000567;gene_name=USP9YP4;ID=exon:NA12877_ch_T0000567:2;Name=USP9YP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8683613	8688988	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=NA12877_ch_T0000567;gene_id=NA12877_ch_G0000166;Parent=NA12877_ch_T0000567;transcript_name=NA12877_ch_T0000567;gene_name=USP9YP4;ID=intron:NA12877_ch_T0000567:2;Name=USP9YP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8688989	8689178	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=NA12877_ch_T0000567;gene_id=NA12877_ch_G0000166;Parent=NA12877_ch_T0000567;transcript_name=NA12877_ch_T0000567;gene_name=USP9YP4;ID=exon:NA12877_ch_T0000567:3;Name=USP9YP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8689179	8691290	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=NA12877_ch_T0000567;gene_id=NA12877_ch_G0000166;Parent=NA12877_ch_T0000567;transcript_name=NA12877_ch_T0000567;gene_name=USP9YP4;ID=intron:NA12877_ch_T0000567:3;Name=USP9YP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8691291	8691497	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=NA12877_ch_T0000567;gene_id=NA12877_ch_G0000166;Parent=NA12877_ch_T0000567;transcript_name=NA12877_ch_T0000567;gene_name=USP9YP4;ID=exon:NA12877_ch_T0000567:4;Name=USP9YP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8691498	8694297	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=NA12877_ch_T0000567;gene_id=NA12877_ch_G0000166;Parent=NA12877_ch_T0000567;transcript_name=NA12877_ch_T0000567;gene_name=USP9YP4;ID=intron:NA12877_ch_T0000567:4;Name=USP9YP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8694298	8694512	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=NA12877_ch_T0000567;gene_id=NA12877_ch_G0000166;Parent=NA12877_ch_T0000567;transcript_name=NA12877_ch_T0000567;gene_name=USP9YP4;ID=exon:NA12877_ch_T0000567:5;Name=USP9YP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8720817	8721149	.	+	.	source_gene_common_name=ELOCP4;source_gene=ENSG00000232924.1;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;gene_id=NA12877_ch_G0000167;gene_biotype=processed_pseudogene;gene_name=ELOCP4;gene_sources=liftoff;ID=NA12877_ch_G0000167;Name=ELOCP4
NA12877_chrY	CAT	transcript	8720817	8721149	1000	+	.	source_transcript=ENST00000420090.1;source_transcript_name=ELOCP4-201;source_gene=ENSG00000232924.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232924.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP4;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;transcript_id=NA12877_ch_T0000568;gene_id=NA12877_ch_G0000167;Parent=NA12877_ch_G0000167;transcript_name=NA12877_ch_T0000568;gene_name=ELOCP4;ID=NA12877_ch_T0000568;Name=ELOCP4
NA12877_chrY	CAT	exon	8720817	8721149	.	+	.	source_transcript=ENST00000420090.1;source_transcript_name=ELOCP4-201;source_gene=ENSG00000232924.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232924.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP4;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;transcript_id=NA12877_ch_T0000568;gene_id=NA12877_ch_G0000167;Parent=NA12877_ch_T0000568;transcript_name=NA12877_ch_T0000568;gene_name=ELOCP4;ID=exon:NA12877_ch_T0000568:0;Name=ELOCP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8782147	8801416	.	+	.	source_gene_common_name=ENSG00000299745;source_gene=ENSG00000299745.1;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;gene_id=NA12877_ch_G0000168;gene_biotype=lncRNA;gene_name=ENSG00000299745;gene_sources=liftoff;ID=NA12877_ch_G0000168;Name=ENSG00000299745
NA12877_chrY	CAT	transcript	8782147	8801416	1000	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=NA12877_ch_T0000569;gene_id=NA12877_ch_G0000168;Parent=NA12877_ch_G0000168;transcript_name=NA12877_ch_T0000569;gene_name=ENSG00000299745;ID=NA12877_ch_T0000569;Name=ENSG00000299745
NA12877_chrY	CAT	exon	8782147	8782459	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=NA12877_ch_T0000569;gene_id=NA12877_ch_G0000168;Parent=NA12877_ch_T0000569;transcript_name=NA12877_ch_T0000569;gene_name=ENSG00000299745;ID=exon:NA12877_ch_T0000569:0;Name=ENSG00000299745;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8782460	8783704	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=NA12877_ch_T0000569;gene_id=NA12877_ch_G0000168;Parent=NA12877_ch_T0000569;transcript_name=NA12877_ch_T0000569;gene_name=ENSG00000299745;ID=intron:NA12877_ch_T0000569:0;Name=ENSG00000299745;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8783705	8783779	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=NA12877_ch_T0000569;gene_id=NA12877_ch_G0000168;Parent=NA12877_ch_T0000569;transcript_name=NA12877_ch_T0000569;gene_name=ENSG00000299745;ID=exon:NA12877_ch_T0000569:1;Name=ENSG00000299745;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8783780	8794446	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=NA12877_ch_T0000569;gene_id=NA12877_ch_G0000168;Parent=NA12877_ch_T0000569;transcript_name=NA12877_ch_T0000569;gene_name=ENSG00000299745;ID=intron:NA12877_ch_T0000569:1;Name=ENSG00000299745;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8794447	8794559	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=NA12877_ch_T0000569;gene_id=NA12877_ch_G0000168;Parent=NA12877_ch_T0000569;transcript_name=NA12877_ch_T0000569;gene_name=ENSG00000299745;ID=exon:NA12877_ch_T0000569:2;Name=ENSG00000299745;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8794560	8798148	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=NA12877_ch_T0000569;gene_id=NA12877_ch_G0000168;Parent=NA12877_ch_T0000569;transcript_name=NA12877_ch_T0000569;gene_name=ENSG00000299745;ID=intron:NA12877_ch_T0000569:2;Name=ENSG00000299745;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8798149	8798316	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=NA12877_ch_T0000569;gene_id=NA12877_ch_G0000168;Parent=NA12877_ch_T0000569;transcript_name=NA12877_ch_T0000569;gene_name=ENSG00000299745;ID=exon:NA12877_ch_T0000569:3;Name=ENSG00000299745;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8798317	8801049	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=NA12877_ch_T0000569;gene_id=NA12877_ch_G0000168;Parent=NA12877_ch_T0000569;transcript_name=NA12877_ch_T0000569;gene_name=ENSG00000299745;ID=intron:NA12877_ch_T0000569:3;Name=ENSG00000299745;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8801050	8801416	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=NA12877_ch_T0000569;gene_id=NA12877_ch_G0000168;Parent=NA12877_ch_T0000569;transcript_name=NA12877_ch_T0000569;gene_name=ENSG00000299745;ID=exon:NA12877_ch_T0000569:4;Name=ENSG00000299745;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8798521	8814787	.	-	.	source_gene_common_name=ENSG00000299768;source_gene=ENSG00000299768.1;gene_id=NA12877_ch_G0000169;gene_biotype=lncRNA;gene_name=ENSG00000299768;gene_sources=liftoff;ID=NA12877_ch_G0000169;Name=ENSG00000299768
NA12877_chrY	CAT	transcript	8798521	8814787	1000	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_G0000169;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=NA12877_ch_T0000570;Name=ENSG00000299768
NA12877_chrY	CAT	exon	8798521	8798738	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000570:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8798739	8801745	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000570:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8801746	8801834	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000570:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8801835	8803613	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000570:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8803614	8803724	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000570:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8803725	8804679	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000570:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8804680	8804794	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000570:3;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8804795	8806842	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000570:3;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8806843	8806995	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000570:4;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8806996	8808895	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000570:4;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8808896	8809073	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000570:5;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8809074	8812088	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000570:5;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812089	8812192	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000570:6;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812193	8812664	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000570:6;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812665	8812777	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000570:7;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812778	8814632	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000570:7;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8814633	8814787	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000570;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000570;transcript_name=NA12877_ch_T0000570;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000570:8;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8798523	8814745	1000	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_G0000169;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=NA12877_ch_T0000571;Name=ENSG00000299768
NA12877_chrY	CAT	exon	8798523	8798738	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000571:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8798739	8801745	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000571:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8801746	8801834	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000571:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8801835	8801919	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000571:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8801920	8802030	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000571:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8802031	8803613	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000571:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8803614	8803724	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000571:3;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8803725	8804679	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000571:3;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8804680	8804794	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000571:4;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8804795	8806842	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000571:4;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8806843	8806995	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000571:5;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8806996	8808895	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000571:5;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8808896	8809073	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000571:6;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8809074	8812088	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000571:6;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812089	8812192	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000571:7;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812193	8812664	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000571:7;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812665	8812777	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000571:8;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812778	8814632	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000571:8;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8814633	8814745	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000571;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000571;transcript_name=NA12877_ch_T0000571;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000571:9;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8798523	8814745	1000	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_G0000169;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=NA12877_ch_T0000572;Name=ENSG00000299768
NA12877_chrY	CAT	exon	8798523	8798738	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000572:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8798739	8801745	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000572:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8801746	8801834	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000572:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8801835	8803613	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000572:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8803614	8803724	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000572:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8803725	8806842	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000572:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8806843	8806995	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000572:3;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8806996	8808895	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000572:3;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8808896	8809073	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000572:4;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8809074	8812088	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000572:4;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812089	8812192	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000572:5;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812193	8812664	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000572:5;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812665	8812777	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000572:6;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812778	8814632	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000572:6;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8814633	8814745	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000572;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000572;transcript_name=NA12877_ch_T0000572;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000572:7;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8798523	8814707	1000	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_G0000169;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=NA12877_ch_T0000573;Name=ENSG00000299768
NA12877_chrY	CAT	exon	8798523	8798738	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000573:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8798739	8801745	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000573:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8801746	8801834	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000573:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8801835	8801919	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000573:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8801920	8802030	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000573:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8802031	8803613	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000573:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8803614	8803724	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000573:3;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8803725	8804679	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000573:3;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8804680	8804794	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000573:4;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8804795	8806842	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000573:4;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8806843	8806995	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000573:5;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8806996	8808895	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000573:5;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8808896	8809073	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000573:6;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8809074	8812088	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000573:6;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812089	8812192	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000573:7;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812193	8812664	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000573:7;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812665	8812777	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000573:8;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812778	8814578	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000573:8;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8814579	8814707	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000573;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000573;transcript_name=NA12877_ch_T0000573;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000573:9;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8803365	8814770	1000	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000575;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_G0000169;transcript_name=NA12877_ch_T0000575;gene_name=ENSG00000299768;ID=NA12877_ch_T0000575;Name=ENSG00000299768
NA12877_chrY	CAT	exon	8803365	8804794	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000575;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000575;transcript_name=NA12877_ch_T0000575;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000575:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8804795	8806842	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000575;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000575;transcript_name=NA12877_ch_T0000575;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000575:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8806843	8806995	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000575;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000575;transcript_name=NA12877_ch_T0000575;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000575:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8806996	8808895	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000575;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000575;transcript_name=NA12877_ch_T0000575;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000575:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8808896	8809073	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000575;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000575;transcript_name=NA12877_ch_T0000575;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000575:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8809074	8812088	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000575;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000575;transcript_name=NA12877_ch_T0000575;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000575:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812089	8812192	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000575;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000575;transcript_name=NA12877_ch_T0000575;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000575:3;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812193	8812664	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000575;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000575;transcript_name=NA12877_ch_T0000575;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000575:3;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812665	8812777	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000575;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000575;transcript_name=NA12877_ch_T0000575;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000575:4;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812778	8814632	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000575;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000575;transcript_name=NA12877_ch_T0000575;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000575:4;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8814633	8814770	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000575;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000575;transcript_name=NA12877_ch_T0000575;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000575:5;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8808158	8814770	1000	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000576;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_G0000169;transcript_name=NA12877_ch_T0000576;gene_name=ENSG00000299768;ID=NA12877_ch_T0000576;Name=ENSG00000299768
NA12877_chrY	CAT	exon	8808158	8809073	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000576;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000576;transcript_name=NA12877_ch_T0000576;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000576:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8809074	8812088	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000576;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000576;transcript_name=NA12877_ch_T0000576;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000576:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812089	8812192	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000576;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000576;transcript_name=NA12877_ch_T0000576;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000576:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812193	8812664	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000576;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000576;transcript_name=NA12877_ch_T0000576;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000576:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812665	8812777	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000576;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000576;transcript_name=NA12877_ch_T0000576;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000576:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812778	8814632	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000576;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000576;transcript_name=NA12877_ch_T0000576;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000576:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8814633	8814770	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000576;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000576;transcript_name=NA12877_ch_T0000576;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000576:3;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8811577	8814744	1000	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000577;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_G0000169;transcript_name=NA12877_ch_T0000577;gene_name=ENSG00000299768;ID=NA12877_ch_T0000577;Name=ENSG00000299768
NA12877_chrY	CAT	exon	8811577	8812192	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000577;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000577;transcript_name=NA12877_ch_T0000577;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000577:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812193	8812664	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000577;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000577;transcript_name=NA12877_ch_T0000577;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000577:0;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812665	8812777	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000577;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000577;transcript_name=NA12877_ch_T0000577;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000577:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812778	8814632	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000577;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000577;transcript_name=NA12877_ch_T0000577;gene_name=ENSG00000299768;ID=intron:NA12877_ch_T0000577:1;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8814633	8814744	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=NA12877_ch_T0000577;gene_id=NA12877_ch_G0000169;Parent=NA12877_ch_T0000577;transcript_name=NA12877_ch_T0000577;gene_name=ENSG00000299768;ID=exon:NA12877_ch_T0000577:2;Name=ENSG00000299768;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8801034	8812773	.	-	.	source_gene_common_name=RBMY1A3P;source_gene=ENSG00000197038.6;gene_id=NA12877_ch_G0000170;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=NA12877_ch_G0000170;Name=RBMY1A3P
NA12877_chrY	CAT	transcript	8801034	8812773	1000	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_G0000170;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=NA12877_ch_T0000574;Name=RBMY1A3P
NA12877_chrY	CAT	exon	8801034	8801335	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=exon:NA12877_ch_T0000574:0;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8801336	8801919	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=intron:NA12877_ch_T0000574:0;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8801920	8802030	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=exon:NA12877_ch_T0000574:1;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8802031	8802528	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=intron:NA12877_ch_T0000574:1;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8802529	8802639	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=exon:NA12877_ch_T0000574:2;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8802640	8803076	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=intron:NA12877_ch_T0000574:2;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8803077	8803186	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=exon:NA12877_ch_T0000574:3;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8803187	8803613	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=intron:NA12877_ch_T0000574:3;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8803614	8803724	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=exon:NA12877_ch_T0000574:4;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8803725	8804679	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=intron:NA12877_ch_T0000574:4;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8804680	8804794	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=exon:NA12877_ch_T0000574:5;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8804795	8806842	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=intron:NA12877_ch_T0000574:5;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8806843	8806995	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=exon:NA12877_ch_T0000574:6;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8806996	8808895	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=intron:NA12877_ch_T0000574:6;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8808896	8809073	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=exon:NA12877_ch_T0000574:7;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8809074	8812088	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=intron:NA12877_ch_T0000574:7;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812089	8812192	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=exon:NA12877_ch_T0000574:8;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8812193	8812664	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=intron:NA12877_ch_T0000574:8;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8812665	8812773	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=NA12877_ch_T0000574;gene_id=NA12877_ch_G0000170;Parent=NA12877_ch_T0000574;transcript_name=NA12877_ch_T0000574;gene_name=RBMY1A3P;ID=exon:NA12877_ch_T0000574:9;Name=RBMY1A3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8815703	8815951	.	+	.	source_gene_common_name=ENSG00000275310;source_gene=ENSG00000275310.1;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;gene_id=NA12877_ch_G0000171;gene_biotype=processed_pseudogene;gene_name=ENSG00000275310;gene_sources=liftoff;ID=NA12877_ch_G0000171;Name=ENSG00000275310
NA12877_chrY	CAT	transcript	8815703	8815951	1000	+	.	source_transcript=ENST00000610661.1;source_transcript_name=ENST00000610661;source_gene=ENSG00000275310.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275310.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610661.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275310;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;transcript_id=NA12877_ch_T0000578;gene_id=NA12877_ch_G0000171;Parent=NA12877_ch_G0000171;transcript_name=NA12877_ch_T0000578;gene_name=ENSG00000275310;ID=NA12877_ch_T0000578;Name=ENSG00000275310
NA12877_chrY	CAT	exon	8815703	8815951	.	+	.	source_transcript=ENST00000610661.1;source_transcript_name=ENST00000610661;source_gene=ENSG00000275310.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275310.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610661.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275310;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;transcript_id=NA12877_ch_T0000578;gene_id=NA12877_ch_G0000171;Parent=NA12877_ch_T0000578;transcript_name=NA12877_ch_T0000578;gene_name=ENSG00000275310;ID=exon:NA12877_ch_T0000578:0;Name=ENSG00000275310;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8819784	8824736	.	-	.	source_gene_common_name=TTTY20;source_gene=ENSG00000232808.1;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;gene_id=NA12877_ch_G0000172;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=NA12877_ch_G0000172;Name=TTTY20
NA12877_chrY	CAT	transcript	8819784	8824736	1000	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=NA12877_ch_T0000579;gene_id=NA12877_ch_G0000172;Parent=NA12877_ch_G0000172;transcript_name=NA12877_ch_T0000579;gene_name=TTTY20;ID=NA12877_ch_T0000579;Name=TTTY20
NA12877_chrY	CAT	exon	8819784	8819960	.	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=NA12877_ch_T0000579;gene_id=NA12877_ch_G0000172;Parent=NA12877_ch_T0000579;transcript_name=NA12877_ch_T0000579;gene_name=TTTY20;ID=exon:NA12877_ch_T0000579:0;Name=TTTY20;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8819961	8824654	.	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=NA12877_ch_T0000579;gene_id=NA12877_ch_G0000172;Parent=NA12877_ch_T0000579;transcript_name=NA12877_ch_T0000579;gene_name=TTTY20;ID=intron:NA12877_ch_T0000579:0;Name=TTTY20;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8824655	8824736	.	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=NA12877_ch_T0000579;gene_id=NA12877_ch_G0000172;Parent=NA12877_ch_T0000579;transcript_name=NA12877_ch_T0000579;gene_name=TTTY20;ID=exon:NA12877_ch_T0000579:1;Name=TTTY20;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8827368	8830164	.	+	.	source_gene_common_name=TSPY8;source_gene=ENSG00000229549.9;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;gene_id=NA12877_ch_G0000173;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff;ID=NA12877_ch_G0000173;Name=TSPY8
NA12877_chrY	CAT	transcript	8827368	8830164	100	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_G0000173;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=NA12877_ch_T0000580;Name=TSPY8
NA12877_chrY	CAT	exon	8827368	8827899	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=exon:NA12877_ch_T0000580:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8827414	8827899	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000580:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8827414	8827416	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=start_codon:NA12877_ch_T0000580;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8827900	8828506	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=intron:NA12877_ch_T0000580:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8828507	8828584	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=exon:NA12877_ch_T0000580:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8828507	8828584	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000580:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8828585	8828712	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=intron:NA12877_ch_T0000580:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8828713	8828824	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=exon:NA12877_ch_T0000580:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8828713	8828824	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000580:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8828825	8828925	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=intron:NA12877_ch_T0000580:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8828926	8829071	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=exon:NA12877_ch_T0000580:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8828926	8829071	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000580:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8829072	8829177	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=intron:NA12877_ch_T0000580:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8829178	8829259	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=exon:NA12877_ch_T0000580:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8829178	8829259	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000580:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8829260	8829953	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=intron:NA12877_ch_T0000580:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8829954	8830164	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=exon:NA12877_ch_T0000580:5;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8829954	8829976	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000580:5;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8829974	8829976	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=NA12877_ch_T0000580;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000580;transcript_name=NA12877_ch_T0000580;gene_name=TSPY8;ID=stop_codon:NA12877_ch_T0000580;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8827368	8830163	100	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_G0000173;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=NA12877_ch_T0000581;Name=TSPY8
NA12877_chrY	CAT	exon	8827368	8827500	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=exon:NA12877_ch_T0000581:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8827414	8827500	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000581:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8827414	8827416	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=start_codon:NA12877_ch_T0000581;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8827501	8827761	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=intron:NA12877_ch_T0000581:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8827762	8827899	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=exon:NA12877_ch_T0000581:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8827762	8827899	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000581:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8827900	8828506	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=intron:NA12877_ch_T0000581:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8828507	8828584	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=exon:NA12877_ch_T0000581:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8828507	8828584	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000581:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8828585	8828712	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=intron:NA12877_ch_T0000581:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8828713	8828824	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=exon:NA12877_ch_T0000581:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8828713	8828824	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000581:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8828825	8828925	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=intron:NA12877_ch_T0000581:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8828926	8829071	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=exon:NA12877_ch_T0000581:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8828926	8829071	.	+	2	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000581:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8829072	8829166	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=intron:NA12877_ch_T0000581:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8829167	8829259	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=exon:NA12877_ch_T0000581:5;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8829167	8829229	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000581:5;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8829227	8829229	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=stop_codon:NA12877_ch_T0000581;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8829260	8829953	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=intron:NA12877_ch_T0000581:5;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8829954	8830163	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000581;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000581;transcript_name=NA12877_ch_T0000581;gene_name=TSPY8;ID=exon:NA12877_ch_T0000581:6;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8827414	8830163	100	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_G0000173;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=NA12877_ch_T0000582;Name=TSPY8
NA12877_chrY	CAT	exon	8827414	8827899	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=exon:NA12877_ch_T0000582:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8827414	8827899	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000582:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8827414	8827416	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=start_codon:NA12877_ch_T0000582;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8827900	8828506	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=intron:NA12877_ch_T0000582:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8828507	8828584	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=exon:NA12877_ch_T0000582:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8828507	8828584	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000582:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8828585	8828712	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=intron:NA12877_ch_T0000582:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8828713	8828824	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=exon:NA12877_ch_T0000582:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8828713	8828824	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000582:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8828825	8828925	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=intron:NA12877_ch_T0000582:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8828926	8829071	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=exon:NA12877_ch_T0000582:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8828926	8829071	.	+	2	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000582:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8829072	8829166	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=intron:NA12877_ch_T0000582:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8829167	8829259	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=exon:NA12877_ch_T0000582:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8829167	8829229	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000582:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8829227	8829229	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=stop_codon:NA12877_ch_T0000582;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8829260	8829953	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=intron:NA12877_ch_T0000582:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8829954	8830163	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=NA12877_ch_T0000582;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000582;transcript_name=NA12877_ch_T0000582;gene_name=TSPY8;ID=exon:NA12877_ch_T0000582:5;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8827414	8830170	1000	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=NA12877_ch_T0000583;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_G0000173;transcript_name=NA12877_ch_T0000583;gene_name=TSPY8;ID=NA12877_ch_T0000583;Name=TSPY8
NA12877_chrY	CAT	exon	8827414	8827899	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=NA12877_ch_T0000583;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000583;transcript_name=NA12877_ch_T0000583;gene_name=TSPY8;ID=exon:NA12877_ch_T0000583:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8827900	8828506	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=NA12877_ch_T0000583;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000583;transcript_name=NA12877_ch_T0000583;gene_name=TSPY8;ID=intron:NA12877_ch_T0000583:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8828507	8828584	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=NA12877_ch_T0000583;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000583;transcript_name=NA12877_ch_T0000583;gene_name=TSPY8;ID=exon:NA12877_ch_T0000583:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8828585	8828712	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=NA12877_ch_T0000583;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000583;transcript_name=NA12877_ch_T0000583;gene_name=TSPY8;ID=intron:NA12877_ch_T0000583:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8828713	8829259	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=NA12877_ch_T0000583;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000583;transcript_name=NA12877_ch_T0000583;gene_name=TSPY8;ID=exon:NA12877_ch_T0000583:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8829260	8829386	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=NA12877_ch_T0000583;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000583;transcript_name=NA12877_ch_T0000583;gene_name=TSPY8;ID=intron:NA12877_ch_T0000583:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8829387	8830170	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=NA12877_ch_T0000583;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000583;transcript_name=NA12877_ch_T0000583;gene_name=TSPY8;ID=exon:NA12877_ch_T0000583:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8828774	8830155	1000	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000584;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_G0000173;transcript_name=NA12877_ch_T0000584;gene_name=TSPY8;ID=NA12877_ch_T0000584;Name=TSPY8
NA12877_chrY	CAT	exon	8828774	8829071	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000584;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000584;transcript_name=NA12877_ch_T0000584;gene_name=TSPY8;ID=exon:NA12877_ch_T0000584:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8829072	8829177	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000584;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000584;transcript_name=NA12877_ch_T0000584;gene_name=TSPY8;ID=intron:NA12877_ch_T0000584:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8829178	8829259	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000584;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000584;transcript_name=NA12877_ch_T0000584;gene_name=TSPY8;ID=exon:NA12877_ch_T0000584:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8829260	8829953	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000584;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000584;transcript_name=NA12877_ch_T0000584;gene_name=TSPY8;ID=intron:NA12877_ch_T0000584:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8829954	8830155	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=NA12877_ch_T0000584;gene_id=NA12877_ch_G0000173;Parent=NA12877_ch_T0000584;transcript_name=NA12877_ch_T0000584;gene_name=TSPY8;ID=exon:NA12877_ch_T0000584:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8837385	8845083	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_5;gene_id=NA12877_ch_G0000174;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000174;Name=FAM197Y9
NA12877_chrY	CAT	transcript	8837385	8845083	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000585;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_G0000174;transcript_name=NA12877_ch_T0000585;gene_name=FAM197Y9;ID=NA12877_ch_T0000585;Name=FAM197Y9
NA12877_chrY	CAT	exon	8837385	8839512	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000585;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_T0000585;transcript_name=NA12877_ch_T0000585;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000585:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8839513	8843062	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000585;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_T0000585;transcript_name=NA12877_ch_T0000585;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000585:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8843063	8843148	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000585;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_T0000585;transcript_name=NA12877_ch_T0000585;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000585:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8843149	8844963	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000585;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_T0000585;transcript_name=NA12877_ch_T0000585;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000585:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8844964	8845083	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000585;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_T0000585;transcript_name=NA12877_ch_T0000585;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000585:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8839453	8845065	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000586;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_G0000174;transcript_name=NA12877_ch_T0000586;gene_name=FAM197Y9;ID=NA12877_ch_T0000586;Name=FAM197Y9
NA12877_chrY	CAT	exon	8839453	8839512	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000586;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_T0000586;transcript_name=NA12877_ch_T0000586;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000586:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8839513	8843062	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000586;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_T0000586;transcript_name=NA12877_ch_T0000586;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000586:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8843063	8843221	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000586;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_T0000586;transcript_name=NA12877_ch_T0000586;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000586:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8843222	8844731	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000586;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_T0000586;transcript_name=NA12877_ch_T0000586;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000586:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8844732	8844877	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000586;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_T0000586;transcript_name=NA12877_ch_T0000586;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000586:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8844878	8844963	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000586;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_T0000586;transcript_name=NA12877_ch_T0000586;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000586:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8844964	8845065	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000586;gene_id=NA12877_ch_G0000174;Parent=NA12877_ch_T0000586;transcript_name=NA12877_ch_T0000586;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000586:3;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8844732	8846727	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_4;gene_id=NA12877_ch_G0000175;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000175;Name=FAM197Y9
NA12877_chrY	CAT	transcript	8844732	8846727	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000587;gene_id=NA12877_ch_G0000175;Parent=NA12877_ch_G0000175;transcript_name=NA12877_ch_T0000587;gene_name=FAM197Y9;ID=NA12877_ch_T0000587;Name=FAM197Y9
NA12877_chrY	CAT	exon	8844732	8844877	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000587;gene_id=NA12877_ch_G0000175;Parent=NA12877_ch_T0000587;transcript_name=NA12877_ch_T0000587;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000587:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8844878	8844989	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000587;gene_id=NA12877_ch_G0000175;Parent=NA12877_ch_T0000587;transcript_name=NA12877_ch_T0000587;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000587:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8844990	8845073	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000587;gene_id=NA12877_ch_G0000175;Parent=NA12877_ch_T0000587;transcript_name=NA12877_ch_T0000587;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000587:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8845074	8846417	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000587;gene_id=NA12877_ch_G0000175;Parent=NA12877_ch_T0000587;transcript_name=NA12877_ch_T0000587;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000587:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8846418	8846727	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000587;gene_id=NA12877_ch_G0000175;Parent=NA12877_ch_T0000587;transcript_name=NA12877_ch_T0000587;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000587:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8847680	8850476	.	+	.	source_gene_common_name=TSPY8;source_gene=ENSG00000229549.9;alternative_source_transcripts=ENST00000287721.13;gene_id=NA12877_ch_G0000176;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff;ID=NA12877_ch_G0000176;Name=TSPY8
NA12877_chrY	CAT	transcript	8847680	8850476	100	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_G0000176;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=NA12877_ch_T0000588;Name=TSPY8
NA12877_chrY	CAT	exon	8847680	8848211	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=exon:NA12877_ch_T0000588:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8847726	8848211	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000588:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8847726	8847728	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=start_codon:NA12877_ch_T0000588;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8848212	8848818	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=intron:NA12877_ch_T0000588:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8848819	8848896	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=exon:NA12877_ch_T0000588:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8848819	8848896	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000588:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8848897	8849024	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=intron:NA12877_ch_T0000588:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8849025	8849136	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=exon:NA12877_ch_T0000588:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8849025	8849136	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000588:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8849137	8849237	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=intron:NA12877_ch_T0000588:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8849238	8849383	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=exon:NA12877_ch_T0000588:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8849238	8849383	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000588:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8849384	8849489	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=intron:NA12877_ch_T0000588:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8849490	8849571	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=exon:NA12877_ch_T0000588:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8849490	8849571	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000588:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8849572	8850265	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=intron:NA12877_ch_T0000588:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8850266	8850476	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=exon:NA12877_ch_T0000588:5;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8850266	8850288	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000588:5;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8850286	8850288	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000588;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000588;transcript_name=NA12877_ch_T0000588;gene_name=TSPY8;ID=stop_codon:NA12877_ch_T0000588;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8847680	8850475	100	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_G0000176;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=NA12877_ch_T0000589;Name=TSPY8
NA12877_chrY	CAT	exon	8847680	8847812	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=exon:NA12877_ch_T0000589:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8847726	8847812	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000589:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8847726	8847728	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=start_codon:NA12877_ch_T0000589;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8847813	8848073	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=intron:NA12877_ch_T0000589:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8848074	8848211	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=exon:NA12877_ch_T0000589:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8848074	8848211	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000589:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8848212	8848818	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=intron:NA12877_ch_T0000589:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8848819	8848896	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=exon:NA12877_ch_T0000589:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8848819	8848896	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000589:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8848897	8849024	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=intron:NA12877_ch_T0000589:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8849025	8849136	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=exon:NA12877_ch_T0000589:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8849025	8849136	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000589:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8849137	8849237	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=intron:NA12877_ch_T0000589:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8849238	8849383	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=exon:NA12877_ch_T0000589:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8849238	8849383	.	+	2	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000589:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8849384	8849478	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=intron:NA12877_ch_T0000589:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8849479	8849571	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=exon:NA12877_ch_T0000589:5;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8849479	8849541	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000589:5;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8849539	8849541	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=stop_codon:NA12877_ch_T0000589;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8849572	8850265	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=intron:NA12877_ch_T0000589:5;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8850266	8850475	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=NA12877_ch_T0000589;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000589;transcript_name=NA12877_ch_T0000589;gene_name=TSPY8;ID=exon:NA12877_ch_T0000589:6;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8847726	8850475	100	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_G0000176;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=NA12877_ch_T0000590;Name=TSPY8
NA12877_chrY	CAT	exon	8847726	8848211	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=exon:NA12877_ch_T0000590:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8847726	8848211	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000590:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8847726	8847728	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=start_codon:NA12877_ch_T0000590;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8848212	8848818	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=intron:NA12877_ch_T0000590:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8848819	8848896	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=exon:NA12877_ch_T0000590:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8848819	8848896	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000590:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8848897	8849024	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=intron:NA12877_ch_T0000590:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8849025	8849136	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=exon:NA12877_ch_T0000590:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8849025	8849136	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000590:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8849137	8849237	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=intron:NA12877_ch_T0000590:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8849238	8849383	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=exon:NA12877_ch_T0000590:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8849238	8849383	.	+	2	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000590:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8849384	8849478	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=intron:NA12877_ch_T0000590:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8849479	8849571	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=exon:NA12877_ch_T0000590:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8849479	8849541	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=CDS:NA12877_ch_T0000590:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8849539	8849541	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=stop_codon:NA12877_ch_T0000590;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8849572	8850265	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=intron:NA12877_ch_T0000590:4;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8850266	8850475	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000590;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000590;transcript_name=NA12877_ch_T0000590;gene_name=TSPY8;ID=exon:NA12877_ch_T0000590:5;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8847726	8850482	1000	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000591;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_G0000176;transcript_name=NA12877_ch_T0000591;gene_name=TSPY8;ID=NA12877_ch_T0000591;Name=TSPY8
NA12877_chrY	CAT	exon	8847726	8848211	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000591;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000591;transcript_name=NA12877_ch_T0000591;gene_name=TSPY8;ID=exon:NA12877_ch_T0000591:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8848212	8848818	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000591;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000591;transcript_name=NA12877_ch_T0000591;gene_name=TSPY8;ID=intron:NA12877_ch_T0000591:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8848819	8848896	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000591;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000591;transcript_name=NA12877_ch_T0000591;gene_name=TSPY8;ID=exon:NA12877_ch_T0000591:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8848897	8849024	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000591;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000591;transcript_name=NA12877_ch_T0000591;gene_name=TSPY8;ID=intron:NA12877_ch_T0000591:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8849025	8849571	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000591;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000591;transcript_name=NA12877_ch_T0000591;gene_name=TSPY8;ID=exon:NA12877_ch_T0000591:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8849572	8849698	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000591;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000591;transcript_name=NA12877_ch_T0000591;gene_name=TSPY8;ID=intron:NA12877_ch_T0000591:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8849699	8850482	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000591;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000591;transcript_name=NA12877_ch_T0000591;gene_name=TSPY8;ID=exon:NA12877_ch_T0000591:3;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8849086	8850467	1000	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=NA12877_ch_T0000592;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_G0000176;transcript_name=NA12877_ch_T0000592;gene_name=TSPY8;ID=NA12877_ch_T0000592;Name=TSPY8
NA12877_chrY	CAT	exon	8849086	8849383	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=NA12877_ch_T0000592;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000592;transcript_name=NA12877_ch_T0000592;gene_name=TSPY8;ID=exon:NA12877_ch_T0000592:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8849384	8849489	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=NA12877_ch_T0000592;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000592;transcript_name=NA12877_ch_T0000592;gene_name=TSPY8;ID=intron:NA12877_ch_T0000592:0;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8849490	8849571	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=NA12877_ch_T0000592;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000592;transcript_name=NA12877_ch_T0000592;gene_name=TSPY8;ID=exon:NA12877_ch_T0000592:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8849572	8850265	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=NA12877_ch_T0000592;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000592;transcript_name=NA12877_ch_T0000592;gene_name=TSPY8;ID=intron:NA12877_ch_T0000592:1;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8850266	8850467	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=NA12877_ch_T0000592;gene_id=NA12877_ch_G0000176;Parent=NA12877_ch_T0000592;transcript_name=NA12877_ch_T0000592;gene_name=TSPY8;ID=exon:NA12877_ch_T0000592:2;Name=TSPY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8857711	8865608	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1_2;gene_id=NA12877_ch_G0000177;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=NA12877_ch_G0000177;Name=FAM197Y8
NA12877_chrY	CAT	transcript	8857711	8865608	1000	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000593;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_G0000177;transcript_name=NA12877_ch_T0000593;gene_name=FAM197Y8;ID=NA12877_ch_T0000593;Name=FAM197Y8
NA12877_chrY	CAT	exon	8857711	8859838	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000593;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000593;transcript_name=NA12877_ch_T0000593;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000593:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8859839	8863388	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000593;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000593;transcript_name=NA12877_ch_T0000593;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000593:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8863389	8863474	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000593;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000593;transcript_name=NA12877_ch_T0000593;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000593:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8863475	8865287	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000593;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000593;transcript_name=NA12877_ch_T0000593;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000593:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8865288	8865397	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000593;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000593;transcript_name=NA12877_ch_T0000593;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000593:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8865398	8865593	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000593;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000593;transcript_name=NA12877_ch_T0000593;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000593:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8865594	8865608	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000593;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000593;transcript_name=NA12877_ch_T0000593;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000593:3;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8859778	8865389	1000	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000594;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_G0000177;transcript_name=NA12877_ch_T0000594;gene_name=FAM197Y8;ID=NA12877_ch_T0000594;Name=FAM197Y8
NA12877_chrY	CAT	exon	8859778	8859838	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000594;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000594;transcript_name=NA12877_ch_T0000594;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000594:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8859839	8863388	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000594;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000594;transcript_name=NA12877_ch_T0000594;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000594:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8863389	8863547	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000594;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000594;transcript_name=NA12877_ch_T0000594;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000594:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8863548	8865055	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000594;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000594;transcript_name=NA12877_ch_T0000594;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000594:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8865056	8865201	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000594;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000594;transcript_name=NA12877_ch_T0000594;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000594:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8865202	8865287	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000594;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000594;transcript_name=NA12877_ch_T0000594;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000594:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8865288	8865389	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000594;gene_id=NA12877_ch_G0000177;Parent=NA12877_ch_T0000594;transcript_name=NA12877_ch_T0000594;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000594:3;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8865053	8867021	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7;gene_id=NA12877_ch_G0000178;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=NA12877_ch_G0000178;Name=FAM197Y8
NA12877_chrY	CAT	transcript	8865053	8867021	1000	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000595;gene_id=NA12877_ch_G0000178;Parent=NA12877_ch_G0000178;transcript_name=NA12877_ch_T0000595;gene_name=FAM197Y8;ID=NA12877_ch_T0000595;Name=FAM197Y8
NA12877_chrY	CAT	exon	8865053	8865201	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000595;gene_id=NA12877_ch_G0000178;Parent=NA12877_ch_T0000595;transcript_name=NA12877_ch_T0000595;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000595:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8865202	8865287	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000595;gene_id=NA12877_ch_G0000178;Parent=NA12877_ch_T0000595;transcript_name=NA12877_ch_T0000595;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000595:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8865288	8865397	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000595;gene_id=NA12877_ch_G0000178;Parent=NA12877_ch_T0000595;transcript_name=NA12877_ch_T0000595;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000595:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8865398	8866720	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000595;gene_id=NA12877_ch_G0000178;Parent=NA12877_ch_T0000595;transcript_name=NA12877_ch_T0000595;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000595:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8866721	8867021	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000595;gene_id=NA12877_ch_G0000178;Parent=NA12877_ch_T0000595;transcript_name=NA12877_ch_T0000595;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000595:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8868004	8870818	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=NA12877_ch_G0000179;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=NA12877_ch_G0000179;Name=TSPY4
NA12877_chrY	CAT	transcript	8868004	8870818	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_G0000179;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=NA12877_ch_T0000596;Name=TSPY4
NA12877_chrY	CAT	exon	8868004	8868553	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=exon:NA12877_ch_T0000596:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8868050	8868553	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000596:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8868050	8868052	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=start_codon:NA12877_ch_T0000596;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8868554	8869160	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=intron:NA12877_ch_T0000596:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869161	8869238	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=exon:NA12877_ch_T0000596:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8869161	8869238	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000596:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869239	8869366	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=intron:NA12877_ch_T0000596:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869367	8869478	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=exon:NA12877_ch_T0000596:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8869367	8869478	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000596:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869479	8869579	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=intron:NA12877_ch_T0000596:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869580	8869725	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=exon:NA12877_ch_T0000596:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8869580	8869725	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000596:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869726	8869831	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=intron:NA12877_ch_T0000596:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869832	8869913	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=exon:NA12877_ch_T0000596:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8869832	8869913	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000596:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869914	8870607	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=intron:NA12877_ch_T0000596:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8870608	8870818	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=exon:NA12877_ch_T0000596:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8870608	8870630	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000596:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8870628	8870630	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000596;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000596;transcript_name=NA12877_ch_T0000596;gene_name=TSPY4;ID=stop_codon:NA12877_ch_T0000596;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8868004	8870697	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_G0000179;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=NA12877_ch_T0000597;Name=TSPY4
NA12877_chrY	CAT	exon	8868004	8868136	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=exon:NA12877_ch_T0000597:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8868050	8868136	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000597:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8868050	8868052	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=start_codon:NA12877_ch_T0000597;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8868137	8868415	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=intron:NA12877_ch_T0000597:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8868416	8868553	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=exon:NA12877_ch_T0000597:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8868416	8868553	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000597:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8868554	8869160	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=intron:NA12877_ch_T0000597:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869161	8869238	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=exon:NA12877_ch_T0000597:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8869161	8869238	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000597:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869239	8869366	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=intron:NA12877_ch_T0000597:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869367	8869478	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=exon:NA12877_ch_T0000597:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8869367	8869478	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000597:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869479	8869579	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=intron:NA12877_ch_T0000597:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869580	8869725	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=exon:NA12877_ch_T0000597:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8869580	8869725	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000597:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869726	8869831	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=intron:NA12877_ch_T0000597:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869832	8869913	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=exon:NA12877_ch_T0000597:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8869832	8869913	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000597:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869914	8870607	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=intron:NA12877_ch_T0000597:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8870608	8870697	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=exon:NA12877_ch_T0000597:6;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8870608	8870630	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000597:6;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8870628	8870630	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000597;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000597;transcript_name=NA12877_ch_T0000597;gene_name=TSPY4;ID=stop_codon:NA12877_ch_T0000597;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8868050	8870817	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_G0000179;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=NA12877_ch_T0000598;Name=TSPY4
NA12877_chrY	CAT	exon	8868050	8868553	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=exon:NA12877_ch_T0000598:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8868050	8868553	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000598:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8868050	8868052	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=start_codon:NA12877_ch_T0000598;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8868554	8869160	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=intron:NA12877_ch_T0000598:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869161	8869238	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=exon:NA12877_ch_T0000598:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8869161	8869238	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000598:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869239	8869366	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=intron:NA12877_ch_T0000598:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869367	8869478	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=exon:NA12877_ch_T0000598:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8869367	8869478	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000598:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869479	8869579	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=intron:NA12877_ch_T0000598:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869580	8869725	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=exon:NA12877_ch_T0000598:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8869580	8869725	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000598:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869726	8869820	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=intron:NA12877_ch_T0000598:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869821	8869913	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=exon:NA12877_ch_T0000598:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8869821	8869883	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000598:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8869881	8869883	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=stop_codon:NA12877_ch_T0000598;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869914	8870607	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=intron:NA12877_ch_T0000598:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8870608	8870817	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000598;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000598;transcript_name=NA12877_ch_T0000598;gene_name=TSPY4;ID=exon:NA12877_ch_T0000598:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8868050	8870824	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000599;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_G0000179;transcript_name=NA12877_ch_T0000599;gene_name=TSPY4;ID=NA12877_ch_T0000599;Name=TSPY4
NA12877_chrY	CAT	exon	8868050	8868553	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000599;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000599;transcript_name=NA12877_ch_T0000599;gene_name=TSPY4;ID=exon:NA12877_ch_T0000599:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8868554	8869160	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000599;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000599;transcript_name=NA12877_ch_T0000599;gene_name=TSPY4;ID=intron:NA12877_ch_T0000599:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869161	8869238	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000599;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000599;transcript_name=NA12877_ch_T0000599;gene_name=TSPY4;ID=exon:NA12877_ch_T0000599:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869239	8869366	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000599;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000599;transcript_name=NA12877_ch_T0000599;gene_name=TSPY4;ID=intron:NA12877_ch_T0000599:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869367	8869913	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000599;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000599;transcript_name=NA12877_ch_T0000599;gene_name=TSPY4;ID=exon:NA12877_ch_T0000599:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869914	8870040	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000599;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000599;transcript_name=NA12877_ch_T0000599;gene_name=TSPY4;ID=intron:NA12877_ch_T0000599:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8870041	8870824	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000599;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000599;transcript_name=NA12877_ch_T0000599;gene_name=TSPY4;ID=exon:NA12877_ch_T0000599:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8869428	8870809	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000600;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_G0000179;transcript_name=NA12877_ch_T0000600;gene_name=TSPY4;ID=NA12877_ch_T0000600;Name=TSPY4
NA12877_chrY	CAT	exon	8869428	8869725	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000600;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000600;transcript_name=NA12877_ch_T0000600;gene_name=TSPY4;ID=exon:NA12877_ch_T0000600:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869726	8869820	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000600;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000600;transcript_name=NA12877_ch_T0000600;gene_name=TSPY4;ID=intron:NA12877_ch_T0000600:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8869821	8869913	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000600;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000600;transcript_name=NA12877_ch_T0000600;gene_name=TSPY4;ID=exon:NA12877_ch_T0000600:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8869914	8870607	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000600;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000600;transcript_name=NA12877_ch_T0000600;gene_name=TSPY4;ID=intron:NA12877_ch_T0000600:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8870608	8870809	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000600;gene_id=NA12877_ch_G0000179;Parent=NA12877_ch_T0000600;transcript_name=NA12877_ch_T0000600;gene_name=TSPY4;ID=exon:NA12877_ch_T0000600:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8878017	8885901	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1;gene_id=NA12877_ch_G0000180;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=NA12877_ch_G0000180;Name=FAM197Y8
NA12877_chrY	CAT	transcript	8878017	8885901	1000	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000601;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_G0000180;transcript_name=NA12877_ch_T0000601;gene_name=FAM197Y8;ID=NA12877_ch_T0000601;Name=FAM197Y8
NA12877_chrY	CAT	exon	8878017	8880145	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000601;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000601;transcript_name=NA12877_ch_T0000601;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000601:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8880146	8883700	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000601;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000601;transcript_name=NA12877_ch_T0000601;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000601:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8883701	8883786	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000601;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000601;transcript_name=NA12877_ch_T0000601;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000601:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8883787	8885580	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000601;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000601;transcript_name=NA12877_ch_T0000601;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000601:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8885581	8885690	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000601;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000601;transcript_name=NA12877_ch_T0000601;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000601:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8885691	8885886	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000601;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000601;transcript_name=NA12877_ch_T0000601;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000601:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8885887	8885901	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000601;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000601;transcript_name=NA12877_ch_T0000601;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000601:3;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8880085	8885682	1000	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000602;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_G0000180;transcript_name=NA12877_ch_T0000602;gene_name=FAM197Y8;ID=NA12877_ch_T0000602;Name=FAM197Y8
NA12877_chrY	CAT	exon	8880085	8880145	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000602;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000602;transcript_name=NA12877_ch_T0000602;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000602:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8880146	8883700	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000602;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000602;transcript_name=NA12877_ch_T0000602;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000602:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8883701	8883859	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000602;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000602;transcript_name=NA12877_ch_T0000602;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000602:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8883860	8885348	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000602;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000602;transcript_name=NA12877_ch_T0000602;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000602:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8885349	8885494	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000602;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000602;transcript_name=NA12877_ch_T0000602;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000602:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8885495	8885580	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000602;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000602;transcript_name=NA12877_ch_T0000602;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000602:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8885581	8885682	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000602;gene_id=NA12877_ch_G0000180;Parent=NA12877_ch_T0000602;transcript_name=NA12877_ch_T0000602;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000602:3;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8885346	8887312	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7_1;gene_id=NA12877_ch_G0000181;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=NA12877_ch_G0000181;Name=FAM197Y8
NA12877_chrY	CAT	transcript	8885346	8887312	1000	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000603;gene_id=NA12877_ch_G0000181;Parent=NA12877_ch_G0000181;transcript_name=NA12877_ch_T0000603;gene_name=FAM197Y8;ID=NA12877_ch_T0000603;Name=FAM197Y8
NA12877_chrY	CAT	exon	8885346	8885494	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000603;gene_id=NA12877_ch_G0000181;Parent=NA12877_ch_T0000603;transcript_name=NA12877_ch_T0000603;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000603:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8885495	8885580	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000603;gene_id=NA12877_ch_G0000181;Parent=NA12877_ch_T0000603;transcript_name=NA12877_ch_T0000603;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000603:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8885581	8885690	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000603;gene_id=NA12877_ch_G0000181;Parent=NA12877_ch_T0000603;transcript_name=NA12877_ch_T0000603;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000603:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8885691	8887011	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000603;gene_id=NA12877_ch_G0000181;Parent=NA12877_ch_T0000603;transcript_name=NA12877_ch_T0000603;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000603:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8887012	8887312	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000603;gene_id=NA12877_ch_G0000181;Parent=NA12877_ch_T0000603;transcript_name=NA12877_ch_T0000603;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000603:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8888299	8891104	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1_1;gene_id=NA12877_ch_G0000182;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=NA12877_ch_G0000182;Name=ENSG00000301844
NA12877_chrY	CAT	transcript	8888299	8891104	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000604;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_G0000182;transcript_name=NA12877_ch_T0000604;gene_name=ENSG00000301844;ID=NA12877_ch_T0000604;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8888299	8888827	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000604;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000604;transcript_name=NA12877_ch_T0000604;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000604:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8888828	8889434	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000604;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000604;transcript_name=NA12877_ch_T0000604;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000604:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889435	8889512	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000604;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000604;transcript_name=NA12877_ch_T0000604;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000604:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889513	8889640	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000604;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000604;transcript_name=NA12877_ch_T0000604;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000604:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889641	8889752	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000604;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000604;transcript_name=NA12877_ch_T0000604;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000604:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889753	8889853	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000604;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000604;transcript_name=NA12877_ch_T0000604;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000604:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889854	8889999	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000604;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000604;transcript_name=NA12877_ch_T0000604;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000604:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890000	8890105	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000604;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000604;transcript_name=NA12877_ch_T0000604;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000604:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890106	8890187	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000604;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000604;transcript_name=NA12877_ch_T0000604;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000604:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890188	8890881	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000604;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000604;transcript_name=NA12877_ch_T0000604;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000604:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890882	8891104	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000604;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000604;transcript_name=NA12877_ch_T0000604;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000604:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8888308	8891099	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000605;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_G0000182;transcript_name=NA12877_ch_T0000605;gene_name=ENSG00000301844;ID=NA12877_ch_T0000605;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8888308	8888827	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000605;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000605;transcript_name=NA12877_ch_T0000605;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000605:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8888828	8889434	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000605;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000605;transcript_name=NA12877_ch_T0000605;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000605:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889435	8889512	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000605;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000605;transcript_name=NA12877_ch_T0000605;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000605:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889513	8889640	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000605;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000605;transcript_name=NA12877_ch_T0000605;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000605:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889641	8889752	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000605;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000605;transcript_name=NA12877_ch_T0000605;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000605:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889753	8889860	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000605;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000605;transcript_name=NA12877_ch_T0000605;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000605:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889861	8889999	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000605;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000605;transcript_name=NA12877_ch_T0000605;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000605:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890000	8890105	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000605;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000605;transcript_name=NA12877_ch_T0000605;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000605:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890106	8890187	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000605;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000605;transcript_name=NA12877_ch_T0000605;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000605:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890188	8890881	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000605;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000605;transcript_name=NA12877_ch_T0000605;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000605:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890882	8891099	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000605;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000605;transcript_name=NA12877_ch_T0000605;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000605:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8888330	8891094	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000606;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_G0000182;transcript_name=NA12877_ch_T0000606;gene_name=ENSG00000301844;ID=NA12877_ch_T0000606;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8888330	8888827	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000606;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000606;transcript_name=NA12877_ch_T0000606;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000606:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8888828	8889434	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000606;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000606;transcript_name=NA12877_ch_T0000606;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000606:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889435	8889512	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000606;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000606;transcript_name=NA12877_ch_T0000606;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000606:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889513	8889640	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000606;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000606;transcript_name=NA12877_ch_T0000606;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000606:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889641	8889752	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000606;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000606;transcript_name=NA12877_ch_T0000606;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000606:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889753	8889853	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000606;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000606;transcript_name=NA12877_ch_T0000606;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000606:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889854	8890187	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000606;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000606;transcript_name=NA12877_ch_T0000606;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000606:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890188	8890881	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000606;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000606;transcript_name=NA12877_ch_T0000606;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000606:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890882	8891094	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000606;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000606;transcript_name=NA12877_ch_T0000606;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000606:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8888340	8891099	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000607;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_G0000182;transcript_name=NA12877_ch_T0000607;gene_name=ENSG00000301844;ID=NA12877_ch_T0000607;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8888340	8888827	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000607;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000607;transcript_name=NA12877_ch_T0000607;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000607:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8888828	8889434	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000607;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000607;transcript_name=NA12877_ch_T0000607;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000607:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889435	8889512	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000607;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000607;transcript_name=NA12877_ch_T0000607;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000607:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889513	8889640	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000607;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000607;transcript_name=NA12877_ch_T0000607;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000607:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889641	8889999	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000607;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000607;transcript_name=NA12877_ch_T0000607;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000607:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890000	8890105	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000607;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000607;transcript_name=NA12877_ch_T0000607;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000607:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890106	8890187	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000607;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000607;transcript_name=NA12877_ch_T0000607;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000607:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890188	8890881	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000607;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000607;transcript_name=NA12877_ch_T0000607;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000607:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890882	8891099	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000607;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000607;transcript_name=NA12877_ch_T0000607;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000607:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8888342	8891099	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000608;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_G0000182;transcript_name=NA12877_ch_T0000608;gene_name=ENSG00000301844;ID=NA12877_ch_T0000608;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8888342	8888827	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000608;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000608;transcript_name=NA12877_ch_T0000608;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000608:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8888828	8889434	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000608;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000608;transcript_name=NA12877_ch_T0000608;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000608:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889435	8889512	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000608;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000608;transcript_name=NA12877_ch_T0000608;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000608:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889513	8889640	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000608;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000608;transcript_name=NA12877_ch_T0000608;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000608:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889641	8889752	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000608;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000608;transcript_name=NA12877_ch_T0000608;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000608:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889753	8889853	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000608;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000608;transcript_name=NA12877_ch_T0000608;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000608:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889854	8889999	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000608;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000608;transcript_name=NA12877_ch_T0000608;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000608:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890000	8890094	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000608;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000608;transcript_name=NA12877_ch_T0000608;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000608:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890095	8890187	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000608;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000608;transcript_name=NA12877_ch_T0000608;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000608:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890188	8890881	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000608;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000608;transcript_name=NA12877_ch_T0000608;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000608:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890882	8891099	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000608;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000608;transcript_name=NA12877_ch_T0000608;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000608:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8888342	8891092	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000609;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_G0000182;transcript_name=NA12877_ch_T0000609;gene_name=ENSG00000301844;ID=NA12877_ch_T0000609;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8888342	8888827	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000609;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000609;transcript_name=NA12877_ch_T0000609;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000609:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8888828	8889434	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000609;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000609;transcript_name=NA12877_ch_T0000609;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000609:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889435	8889512	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000609;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000609;transcript_name=NA12877_ch_T0000609;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000609:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889513	8889640	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000609;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000609;transcript_name=NA12877_ch_T0000609;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000609:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889641	8890187	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000609;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000609;transcript_name=NA12877_ch_T0000609;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000609:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890188	8890881	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000609;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000609;transcript_name=NA12877_ch_T0000609;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000609:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890882	8891092	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000609;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000609;transcript_name=NA12877_ch_T0000609;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000609:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8888362	8891099	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000611;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_G0000182;transcript_name=NA12877_ch_T0000611;gene_name=ENSG00000301844;ID=NA12877_ch_T0000611;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8888362	8888827	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000611;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000611;transcript_name=NA12877_ch_T0000611;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000611:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8888828	8889434	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000611;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000611;transcript_name=NA12877_ch_T0000611;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000611:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889435	8889512	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000611;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000611;transcript_name=NA12877_ch_T0000611;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000611:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889513	8889640	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000611;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000611;transcript_name=NA12877_ch_T0000611;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000611:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889641	8889999	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000611;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000611;transcript_name=NA12877_ch_T0000611;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000611:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890000	8890094	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000611;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000611;transcript_name=NA12877_ch_T0000611;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000611:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890095	8890187	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000611;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000611;transcript_name=NA12877_ch_T0000611;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000611:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890188	8890881	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000611;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000611;transcript_name=NA12877_ch_T0000611;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000611:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890882	8891099	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000611;gene_id=NA12877_ch_G0000182;Parent=NA12877_ch_T0000611;transcript_name=NA12877_ch_T0000611;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000611:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8888342	8891092	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8_2;gene_id=NA12877_ch_G0000183;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=NA12877_ch_G0000183;Name=TSPY7P
NA12877_chrY	CAT	transcript	8888342	8891092	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000610;gene_id=NA12877_ch_G0000183;Parent=NA12877_ch_G0000183;transcript_name=NA12877_ch_T0000610;gene_name=TSPY7P;ID=NA12877_ch_T0000610;Name=TSPY7P
NA12877_chrY	CAT	exon	8888342	8888827	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000610;gene_id=NA12877_ch_G0000183;Parent=NA12877_ch_T0000610;transcript_name=NA12877_ch_T0000610;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000610:0;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8888828	8889434	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000610;gene_id=NA12877_ch_G0000183;Parent=NA12877_ch_T0000610;transcript_name=NA12877_ch_T0000610;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000610:0;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889435	8889512	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000610;gene_id=NA12877_ch_G0000183;Parent=NA12877_ch_T0000610;transcript_name=NA12877_ch_T0000610;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000610:1;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889513	8889640	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000610;gene_id=NA12877_ch_G0000183;Parent=NA12877_ch_T0000610;transcript_name=NA12877_ch_T0000610;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000610:1;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889641	8889752	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000610;gene_id=NA12877_ch_G0000183;Parent=NA12877_ch_T0000610;transcript_name=NA12877_ch_T0000610;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000610:2;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8889753	8889853	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000610;gene_id=NA12877_ch_G0000183;Parent=NA12877_ch_T0000610;transcript_name=NA12877_ch_T0000610;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000610:2;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8889854	8889999	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000610;gene_id=NA12877_ch_G0000183;Parent=NA12877_ch_T0000610;transcript_name=NA12877_ch_T0000610;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000610:3;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890000	8890105	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000610;gene_id=NA12877_ch_G0000183;Parent=NA12877_ch_T0000610;transcript_name=NA12877_ch_T0000610;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000610:3;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890106	8890187	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000610;gene_id=NA12877_ch_G0000183;Parent=NA12877_ch_T0000610;transcript_name=NA12877_ch_T0000610;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000610:4;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8890188	8890881	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000610;gene_id=NA12877_ch_G0000183;Parent=NA12877_ch_T0000610;transcript_name=NA12877_ch_T0000610;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000610:4;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8890882	8891092	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000610;gene_id=NA12877_ch_G0000183;Parent=NA12877_ch_T0000610;transcript_name=NA12877_ch_T0000610;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000610:5;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8898329	8906207	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7;gene_id=NA12877_ch_G0000184;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=NA12877_ch_G0000184;Name=FAM197Y7
NA12877_chrY	CAT	transcript	8898329	8906207	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000612;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_G0000184;transcript_name=NA12877_ch_T0000612;gene_name=FAM197Y7;ID=NA12877_ch_T0000612;Name=FAM197Y7
NA12877_chrY	CAT	exon	8898329	8900442	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000612;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000612;transcript_name=NA12877_ch_T0000612;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000612:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8900443	8903991	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000612;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000612;transcript_name=NA12877_ch_T0000612;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000612:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8903992	8904077	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000612;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000612;transcript_name=NA12877_ch_T0000612;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000612:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8904078	8905886	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000612;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000612;transcript_name=NA12877_ch_T0000612;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000612:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8905887	8905996	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000612;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000612;transcript_name=NA12877_ch_T0000612;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000612:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8905997	8906192	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000612;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000612;transcript_name=NA12877_ch_T0000612;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000612:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8906193	8906207	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000612;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000612;transcript_name=NA12877_ch_T0000612;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000612:3;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8900383	8905988	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000613;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_G0000184;transcript_name=NA12877_ch_T0000613;gene_name=FAM197Y7;ID=NA12877_ch_T0000613;Name=FAM197Y7
NA12877_chrY	CAT	exon	8900383	8900442	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000613;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000613;transcript_name=NA12877_ch_T0000613;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000613:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8900443	8903991	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000613;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000613;transcript_name=NA12877_ch_T0000613;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000613:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8903992	8904150	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000613;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000613;transcript_name=NA12877_ch_T0000613;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000613:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8904151	8905654	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000613;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000613;transcript_name=NA12877_ch_T0000613;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000613:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8905655	8905800	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000613;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000613;transcript_name=NA12877_ch_T0000613;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000613:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8905801	8905886	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000613;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000613;transcript_name=NA12877_ch_T0000613;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000613:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8905887	8905988	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000613;gene_id=NA12877_ch_G0000184;Parent=NA12877_ch_T0000613;transcript_name=NA12877_ch_T0000613;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000613:3;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8905655	8907647	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1_2;gene_id=NA12877_ch_G0000185;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=NA12877_ch_G0000185;Name=ENSG00000286120
NA12877_chrY	CAT	transcript	8905655	8907647	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=NA12877_ch_T0000614;gene_id=NA12877_ch_G0000185;Parent=NA12877_ch_G0000185;transcript_name=NA12877_ch_T0000614;gene_name=ENSG00000286120;ID=NA12877_ch_T0000614;Name=ENSG00000286120
NA12877_chrY	CAT	exon	8905655	8905800	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=NA12877_ch_T0000614;gene_id=NA12877_ch_G0000185;Parent=NA12877_ch_T0000614;transcript_name=NA12877_ch_T0000614;gene_name=ENSG00000286120;ID=exon:NA12877_ch_T0000614:0;Name=ENSG00000286120;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8905801	8907336	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=NA12877_ch_T0000614;gene_id=NA12877_ch_G0000185;Parent=NA12877_ch_T0000614;transcript_name=NA12877_ch_T0000614;gene_name=ENSG00000286120;ID=intron:NA12877_ch_T0000614:0;Name=ENSG00000286120;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8907337	8907647	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=NA12877_ch_T0000614;gene_id=NA12877_ch_G0000185;Parent=NA12877_ch_T0000614;transcript_name=NA12877_ch_T0000614;gene_name=ENSG00000286120;ID=exon:NA12877_ch_T0000614:1;Name=ENSG00000286120;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8908601	8911415	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;alternative_source_transcripts=ENST00000287721.13;gene_id=NA12877_ch_G0000186;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=NA12877_ch_G0000186;Name=TSPY4
NA12877_chrY	CAT	transcript	8908601	8911415	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_G0000186;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=NA12877_ch_T0000615;Name=TSPY4
NA12877_chrY	CAT	exon	8908601	8909150	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=exon:NA12877_ch_T0000615:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8908647	8909150	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000615:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8908647	8908649	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=start_codon:NA12877_ch_T0000615;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8909151	8909757	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=intron:NA12877_ch_T0000615:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8909758	8909835	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=exon:NA12877_ch_T0000615:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8909758	8909835	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000615:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8909836	8909963	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=intron:NA12877_ch_T0000615:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8909964	8910075	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=exon:NA12877_ch_T0000615:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8909964	8910075	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000615:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8910076	8910176	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=intron:NA12877_ch_T0000615:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8910177	8910322	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=exon:NA12877_ch_T0000615:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8910177	8910322	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000615:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8910323	8910428	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=intron:NA12877_ch_T0000615:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8910429	8910510	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=exon:NA12877_ch_T0000615:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8910429	8910510	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000615:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8910511	8911204	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=intron:NA12877_ch_T0000615:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8911205	8911415	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=exon:NA12877_ch_T0000615:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8911205	8911227	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000615:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8911225	8911227	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=NA12877_ch_T0000615;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000615;transcript_name=NA12877_ch_T0000615;gene_name=TSPY4;ID=stop_codon:NA12877_ch_T0000615;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8908601	8911294	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_G0000186;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=NA12877_ch_T0000616;Name=TSPY4
NA12877_chrY	CAT	exon	8908601	8908733	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=exon:NA12877_ch_T0000616:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8908647	8908733	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000616:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8908647	8908649	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=start_codon:NA12877_ch_T0000616;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8908734	8909012	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=intron:NA12877_ch_T0000616:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8909013	8909150	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=exon:NA12877_ch_T0000616:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8909013	8909150	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000616:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8909151	8909757	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=intron:NA12877_ch_T0000616:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8909758	8909835	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=exon:NA12877_ch_T0000616:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8909758	8909835	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000616:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8909836	8909963	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=intron:NA12877_ch_T0000616:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8909964	8910075	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=exon:NA12877_ch_T0000616:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8909964	8910075	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000616:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8910076	8910176	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=intron:NA12877_ch_T0000616:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8910177	8910322	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=exon:NA12877_ch_T0000616:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8910177	8910322	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000616:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8910323	8910428	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=intron:NA12877_ch_T0000616:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8910429	8910510	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=exon:NA12877_ch_T0000616:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8910429	8910510	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000616:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8910511	8911204	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=intron:NA12877_ch_T0000616:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8911205	8911294	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=exon:NA12877_ch_T0000616:6;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8911205	8911227	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000616:6;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8911225	8911227	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000616;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000616;transcript_name=NA12877_ch_T0000616;gene_name=TSPY4;ID=stop_codon:NA12877_ch_T0000616;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8908647	8911414	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_G0000186;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=NA12877_ch_T0000617;Name=TSPY4
NA12877_chrY	CAT	exon	8908647	8909150	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=exon:NA12877_ch_T0000617:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8908647	8909150	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000617:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8908647	8908649	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=start_codon:NA12877_ch_T0000617;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8909151	8909757	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=intron:NA12877_ch_T0000617:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8909758	8909835	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=exon:NA12877_ch_T0000617:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8909758	8909835	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000617:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8909836	8909963	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=intron:NA12877_ch_T0000617:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8909964	8910075	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=exon:NA12877_ch_T0000617:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8909964	8910075	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000617:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8910076	8910176	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=intron:NA12877_ch_T0000617:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8910177	8910322	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=exon:NA12877_ch_T0000617:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8910177	8910322	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000617:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8910323	8910417	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=intron:NA12877_ch_T0000617:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8910418	8910510	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=exon:NA12877_ch_T0000617:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8910418	8910480	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000617:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8910478	8910480	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=stop_codon:NA12877_ch_T0000617;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8910511	8911204	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=intron:NA12877_ch_T0000617:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8911205	8911414	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=NA12877_ch_T0000617;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000617;transcript_name=NA12877_ch_T0000617;gene_name=TSPY4;ID=exon:NA12877_ch_T0000617:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8908647	8911421	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.85699999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000618;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_G0000186;transcript_name=NA12877_ch_T0000618;gene_name=TSPY4;ID=NA12877_ch_T0000618;Name=TSPY4
NA12877_chrY	CAT	exon	8908647	8909150	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000618;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000618;transcript_name=NA12877_ch_T0000618;gene_name=TSPY4;ID=exon:NA12877_ch_T0000618:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8909151	8909757	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000618;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000618;transcript_name=NA12877_ch_T0000618;gene_name=TSPY4;ID=intron:NA12877_ch_T0000618:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8909758	8909835	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000618;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000618;transcript_name=NA12877_ch_T0000618;gene_name=TSPY4;ID=exon:NA12877_ch_T0000618:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8909836	8909963	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000618;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000618;transcript_name=NA12877_ch_T0000618;gene_name=TSPY4;ID=intron:NA12877_ch_T0000618:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8909964	8910510	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000618;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000618;transcript_name=NA12877_ch_T0000618;gene_name=TSPY4;ID=exon:NA12877_ch_T0000618:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8910511	8910637	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000618;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000618;transcript_name=NA12877_ch_T0000618;gene_name=TSPY4;ID=intron:NA12877_ch_T0000618:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8910638	8911421	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=NA12877_ch_T0000618;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000618;transcript_name=NA12877_ch_T0000618;gene_name=TSPY4;ID=exon:NA12877_ch_T0000618:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8910025	8911406	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=299.831;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000619;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_G0000186;transcript_name=NA12877_ch_T0000619;gene_name=TSPY4;ID=NA12877_ch_T0000619;Name=TSPY4
NA12877_chrY	CAT	exon	8910025	8910322	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000619;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000619;transcript_name=NA12877_ch_T0000619;gene_name=TSPY4;ID=exon:NA12877_ch_T0000619:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8910323	8910417	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000619;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000619;transcript_name=NA12877_ch_T0000619;gene_name=TSPY4;ID=intron:NA12877_ch_T0000619:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8910418	8910510	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000619;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000619;transcript_name=NA12877_ch_T0000619;gene_name=TSPY4;ID=exon:NA12877_ch_T0000619:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8910511	8911204	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000619;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000619;transcript_name=NA12877_ch_T0000619;gene_name=TSPY4;ID=intron:NA12877_ch_T0000619:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8911205	8911406	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000619;gene_id=NA12877_ch_G0000186;Parent=NA12877_ch_T0000619;transcript_name=NA12877_ch_T0000619;gene_name=TSPY4;ID=exon:NA12877_ch_T0000619:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8920580	8926308	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_4;gene_id=NA12877_ch_G0000187;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000187;Name=FAM197Y5
NA12877_chrY	CAT	transcript	8920580	8926308	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000620;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_G0000187;transcript_name=NA12877_ch_T0000620;gene_name=FAM197Y5;ID=NA12877_ch_T0000620;Name=FAM197Y5
NA12877_chrY	CAT	exon	8920580	8920769	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000620;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_T0000620;transcript_name=NA12877_ch_T0000620;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000620:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8920770	8924319	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000620;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_T0000620;transcript_name=NA12877_ch_T0000620;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000620:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8924320	8924405	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000620;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_T0000620;transcript_name=NA12877_ch_T0000620;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000620:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8924406	8926194	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000620;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_T0000620;transcript_name=NA12877_ch_T0000620;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000620:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8926195	8926308	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000620;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_T0000620;transcript_name=NA12877_ch_T0000620;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000620:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8920710	8926296	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000621;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_G0000187;transcript_name=NA12877_ch_T0000621;gene_name=FAM197Y5;ID=NA12877_ch_T0000621;Name=FAM197Y5
NA12877_chrY	CAT	exon	8920710	8920769	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000621;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_T0000621;transcript_name=NA12877_ch_T0000621;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000621:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8920770	8924319	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000621;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_T0000621;transcript_name=NA12877_ch_T0000621;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000621:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8924320	8924478	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000621;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_T0000621;transcript_name=NA12877_ch_T0000621;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000621:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8924479	8925962	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000621;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_T0000621;transcript_name=NA12877_ch_T0000621;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000621:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8925963	8926108	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000621;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_T0000621;transcript_name=NA12877_ch_T0000621;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000621:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8926109	8926194	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000621;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_T0000621;transcript_name=NA12877_ch_T0000621;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000621:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8926195	8926296	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000621;gene_id=NA12877_ch_G0000187;Parent=NA12877_ch_T0000621;transcript_name=NA12877_ch_T0000621;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000621:3;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8925963	8927955	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_5;gene_id=NA12877_ch_G0000188;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000188;Name=FAM197Y5
NA12877_chrY	CAT	transcript	8925963	8927955	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000622;gene_id=NA12877_ch_G0000188;Parent=NA12877_ch_G0000188;transcript_name=NA12877_ch_T0000622;gene_name=FAM197Y5;ID=NA12877_ch_T0000622;Name=FAM197Y5
NA12877_chrY	CAT	exon	8925963	8926108	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000622;gene_id=NA12877_ch_G0000188;Parent=NA12877_ch_T0000622;transcript_name=NA12877_ch_T0000622;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000622:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8926109	8927644	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000622;gene_id=NA12877_ch_G0000188;Parent=NA12877_ch_T0000622;transcript_name=NA12877_ch_T0000622;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000622:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8927645	8927955	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000622;gene_id=NA12877_ch_G0000188;Parent=NA12877_ch_T0000622;transcript_name=NA12877_ch_T0000622;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000622:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8928913	8931718	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1_2;gene_id=NA12877_ch_G0000189;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=NA12877_ch_G0000189;Name=ENSG00000301844
NA12877_chrY	CAT	transcript	8928913	8931718	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000623;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_G0000189;transcript_name=NA12877_ch_T0000623;gene_name=ENSG00000301844;ID=NA12877_ch_T0000623;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8928913	8929441	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000623;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000623;transcript_name=NA12877_ch_T0000623;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000623:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8929442	8930048	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000623;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000623;transcript_name=NA12877_ch_T0000623;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000623:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930049	8930126	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000623;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000623;transcript_name=NA12877_ch_T0000623;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000623:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930127	8930254	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000623;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000623;transcript_name=NA12877_ch_T0000623;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000623:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930255	8930366	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000623;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000623;transcript_name=NA12877_ch_T0000623;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000623:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930367	8930467	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000623;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000623;transcript_name=NA12877_ch_T0000623;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000623:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930468	8930613	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000623;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000623;transcript_name=NA12877_ch_T0000623;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000623:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930614	8930719	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000623;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000623;transcript_name=NA12877_ch_T0000623;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000623:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930720	8930801	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000623;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000623;transcript_name=NA12877_ch_T0000623;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000623:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930802	8931495	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000623;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000623;transcript_name=NA12877_ch_T0000623;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000623:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8931496	8931718	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000623;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000623;transcript_name=NA12877_ch_T0000623;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000623:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8928922	8931713	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000624;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_G0000189;transcript_name=NA12877_ch_T0000624;gene_name=ENSG00000301844;ID=NA12877_ch_T0000624;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8928922	8929441	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000624;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000624;transcript_name=NA12877_ch_T0000624;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000624:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8929442	8930048	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000624;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000624;transcript_name=NA12877_ch_T0000624;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000624:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930049	8930126	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000624;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000624;transcript_name=NA12877_ch_T0000624;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000624:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930127	8930254	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000624;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000624;transcript_name=NA12877_ch_T0000624;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000624:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930255	8930366	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000624;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000624;transcript_name=NA12877_ch_T0000624;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000624:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930367	8930474	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000624;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000624;transcript_name=NA12877_ch_T0000624;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000624:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930475	8930613	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000624;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000624;transcript_name=NA12877_ch_T0000624;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000624:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930614	8930719	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000624;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000624;transcript_name=NA12877_ch_T0000624;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000624:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930720	8930801	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000624;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000624;transcript_name=NA12877_ch_T0000624;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000624:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930802	8931495	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000624;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000624;transcript_name=NA12877_ch_T0000624;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000624:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8931496	8931713	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000624;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000624;transcript_name=NA12877_ch_T0000624;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000624:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8928944	8931708	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000625;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_G0000189;transcript_name=NA12877_ch_T0000625;gene_name=ENSG00000301844;ID=NA12877_ch_T0000625;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8928944	8929441	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000625;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000625;transcript_name=NA12877_ch_T0000625;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000625:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8929442	8930048	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000625;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000625;transcript_name=NA12877_ch_T0000625;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000625:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930049	8930126	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000625;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000625;transcript_name=NA12877_ch_T0000625;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000625:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930127	8930254	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000625;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000625;transcript_name=NA12877_ch_T0000625;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000625:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930255	8930366	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000625;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000625;transcript_name=NA12877_ch_T0000625;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000625:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930367	8930467	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000625;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000625;transcript_name=NA12877_ch_T0000625;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000625:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930468	8930801	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000625;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000625;transcript_name=NA12877_ch_T0000625;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000625:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930802	8931495	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000625;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000625;transcript_name=NA12877_ch_T0000625;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000625:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8931496	8931708	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000625;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000625;transcript_name=NA12877_ch_T0000625;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000625:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8928954	8931713	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000626;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_G0000189;transcript_name=NA12877_ch_T0000626;gene_name=ENSG00000301844;ID=NA12877_ch_T0000626;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8928954	8929441	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000626;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000626;transcript_name=NA12877_ch_T0000626;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000626:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8929442	8930048	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000626;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000626;transcript_name=NA12877_ch_T0000626;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000626:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930049	8930126	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000626;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000626;transcript_name=NA12877_ch_T0000626;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000626:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930127	8930254	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000626;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000626;transcript_name=NA12877_ch_T0000626;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000626:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930255	8930613	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000626;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000626;transcript_name=NA12877_ch_T0000626;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000626:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930614	8930719	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000626;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000626;transcript_name=NA12877_ch_T0000626;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000626:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930720	8930801	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000626;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000626;transcript_name=NA12877_ch_T0000626;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000626:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930802	8931495	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000626;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000626;transcript_name=NA12877_ch_T0000626;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000626:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8931496	8931713	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000626;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000626;transcript_name=NA12877_ch_T0000626;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000626:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8928956	8931713	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000627;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_G0000189;transcript_name=NA12877_ch_T0000627;gene_name=ENSG00000301844;ID=NA12877_ch_T0000627;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8928956	8929441	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000627;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000627;transcript_name=NA12877_ch_T0000627;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000627:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8929442	8930048	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000627;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000627;transcript_name=NA12877_ch_T0000627;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000627:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930049	8930126	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000627;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000627;transcript_name=NA12877_ch_T0000627;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000627:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930127	8930254	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000627;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000627;transcript_name=NA12877_ch_T0000627;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000627:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930255	8930366	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000627;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000627;transcript_name=NA12877_ch_T0000627;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000627:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930367	8930467	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000627;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000627;transcript_name=NA12877_ch_T0000627;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000627:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930468	8930613	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000627;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000627;transcript_name=NA12877_ch_T0000627;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000627:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930614	8930708	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000627;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000627;transcript_name=NA12877_ch_T0000627;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000627:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930709	8930801	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000627;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000627;transcript_name=NA12877_ch_T0000627;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000627:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930802	8931495	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000627;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000627;transcript_name=NA12877_ch_T0000627;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000627:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8931496	8931713	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000627;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000627;transcript_name=NA12877_ch_T0000627;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000627:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8928956	8931706	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000628;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_G0000189;transcript_name=NA12877_ch_T0000628;gene_name=ENSG00000301844;ID=NA12877_ch_T0000628;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8928956	8929441	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000628;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000628;transcript_name=NA12877_ch_T0000628;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000628:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8929442	8930048	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000628;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000628;transcript_name=NA12877_ch_T0000628;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000628:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930049	8930126	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000628;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000628;transcript_name=NA12877_ch_T0000628;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000628:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930127	8930254	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000628;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000628;transcript_name=NA12877_ch_T0000628;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000628:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930255	8930801	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000628;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000628;transcript_name=NA12877_ch_T0000628;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000628:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930802	8931495	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000628;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000628;transcript_name=NA12877_ch_T0000628;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000628:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8931496	8931706	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000628;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000628;transcript_name=NA12877_ch_T0000628;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000628:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8928976	8931713	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000630;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_G0000189;transcript_name=NA12877_ch_T0000630;gene_name=ENSG00000301844;ID=NA12877_ch_T0000630;Name=ENSG00000301844
NA12877_chrY	CAT	exon	8928976	8929441	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000630;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000630;transcript_name=NA12877_ch_T0000630;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000630:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8929442	8930048	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000630;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000630;transcript_name=NA12877_ch_T0000630;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000630:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930049	8930126	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000630;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000630;transcript_name=NA12877_ch_T0000630;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000630:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930127	8930254	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000630;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000630;transcript_name=NA12877_ch_T0000630;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000630:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930255	8930613	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000630;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000630;transcript_name=NA12877_ch_T0000630;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000630:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930614	8930708	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000630;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000630;transcript_name=NA12877_ch_T0000630;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000630:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930709	8930801	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000630;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000630;transcript_name=NA12877_ch_T0000630;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000630:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930802	8931495	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000630;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000630;transcript_name=NA12877_ch_T0000630;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000630:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8931496	8931713	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000630;gene_id=NA12877_ch_G0000189;Parent=NA12877_ch_T0000630;transcript_name=NA12877_ch_T0000630;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000630:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8928956	8931706	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8_1;gene_id=NA12877_ch_G0000190;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=NA12877_ch_G0000190;Name=TSPY7P
NA12877_chrY	CAT	transcript	8928956	8931706	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000629;gene_id=NA12877_ch_G0000190;Parent=NA12877_ch_G0000190;transcript_name=NA12877_ch_T0000629;gene_name=TSPY7P;ID=NA12877_ch_T0000629;Name=TSPY7P
NA12877_chrY	CAT	exon	8928956	8929441	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000629;gene_id=NA12877_ch_G0000190;Parent=NA12877_ch_T0000629;transcript_name=NA12877_ch_T0000629;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000629:0;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8929442	8930048	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000629;gene_id=NA12877_ch_G0000190;Parent=NA12877_ch_T0000629;transcript_name=NA12877_ch_T0000629;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000629:0;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930049	8930126	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000629;gene_id=NA12877_ch_G0000190;Parent=NA12877_ch_T0000629;transcript_name=NA12877_ch_T0000629;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000629:1;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930127	8930254	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000629;gene_id=NA12877_ch_G0000190;Parent=NA12877_ch_T0000629;transcript_name=NA12877_ch_T0000629;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000629:1;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930255	8930366	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000629;gene_id=NA12877_ch_G0000190;Parent=NA12877_ch_T0000629;transcript_name=NA12877_ch_T0000629;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000629:2;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930367	8930467	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000629;gene_id=NA12877_ch_G0000190;Parent=NA12877_ch_T0000629;transcript_name=NA12877_ch_T0000629;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000629:2;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930468	8930613	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000629;gene_id=NA12877_ch_G0000190;Parent=NA12877_ch_T0000629;transcript_name=NA12877_ch_T0000629;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000629:3;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930614	8930719	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000629;gene_id=NA12877_ch_G0000190;Parent=NA12877_ch_T0000629;transcript_name=NA12877_ch_T0000629;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000629:3;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8930720	8930801	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000629;gene_id=NA12877_ch_G0000190;Parent=NA12877_ch_T0000629;transcript_name=NA12877_ch_T0000629;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000629:4;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8930802	8931495	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000629;gene_id=NA12877_ch_G0000190;Parent=NA12877_ch_T0000629;transcript_name=NA12877_ch_T0000629;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000629:4;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8931496	8931706	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000629;gene_id=NA12877_ch_G0000190;Parent=NA12877_ch_T0000629;transcript_name=NA12877_ch_T0000629;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000629:5;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8938943	8946812	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7_1;gene_id=NA12877_ch_G0000191;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=NA12877_ch_G0000191;Name=FAM197Y7
NA12877_chrY	CAT	transcript	8938943	8946812	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000631;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_G0000191;transcript_name=NA12877_ch_T0000631;gene_name=FAM197Y7;ID=NA12877_ch_T0000631;Name=FAM197Y7
NA12877_chrY	CAT	exon	8938943	8941056	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000631;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000631;transcript_name=NA12877_ch_T0000631;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000631:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8941057	8944600	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000631;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000631;transcript_name=NA12877_ch_T0000631;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000631:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8944601	8944686	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000631;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000631;transcript_name=NA12877_ch_T0000631;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000631:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8944687	8946491	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000631;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000631;transcript_name=NA12877_ch_T0000631;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000631:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8946492	8946601	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000631;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000631;transcript_name=NA12877_ch_T0000631;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000631:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8946602	8946797	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000631;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000631;transcript_name=NA12877_ch_T0000631;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000631:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8946798	8946812	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000631;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000631;transcript_name=NA12877_ch_T0000631;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000631:3;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8940997	8946593	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000632;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_G0000191;transcript_name=NA12877_ch_T0000632;gene_name=FAM197Y7;ID=NA12877_ch_T0000632;Name=FAM197Y7
NA12877_chrY	CAT	exon	8940997	8941056	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000632;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000632;transcript_name=NA12877_ch_T0000632;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000632:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8941057	8944600	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000632;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000632;transcript_name=NA12877_ch_T0000632;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000632:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8944601	8944759	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000632;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000632;transcript_name=NA12877_ch_T0000632;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000632:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8944760	8946259	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000632;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000632;transcript_name=NA12877_ch_T0000632;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000632:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8946260	8946405	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000632;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000632;transcript_name=NA12877_ch_T0000632;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000632:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8946406	8946491	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000632;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000632;transcript_name=NA12877_ch_T0000632;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000632:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8946492	8946593	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000632;gene_id=NA12877_ch_G0000191;Parent=NA12877_ch_T0000632;transcript_name=NA12877_ch_T0000632;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000632:3;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8946260	8948252	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1;gene_id=NA12877_ch_G0000192;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=NA12877_ch_G0000192;Name=ENSG00000286120
NA12877_chrY	CAT	transcript	8946260	8948252	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=NA12877_ch_T0000633;gene_id=NA12877_ch_G0000192;Parent=NA12877_ch_G0000192;transcript_name=NA12877_ch_T0000633;gene_name=ENSG00000286120;ID=NA12877_ch_T0000633;Name=ENSG00000286120
NA12877_chrY	CAT	exon	8946260	8946405	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=NA12877_ch_T0000633;gene_id=NA12877_ch_G0000192;Parent=NA12877_ch_T0000633;transcript_name=NA12877_ch_T0000633;gene_name=ENSG00000286120;ID=exon:NA12877_ch_T0000633:0;Name=ENSG00000286120;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8946406	8947941	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=NA12877_ch_T0000633;gene_id=NA12877_ch_G0000192;Parent=NA12877_ch_T0000633;transcript_name=NA12877_ch_T0000633;gene_name=ENSG00000286120;ID=intron:NA12877_ch_T0000633:0;Name=ENSG00000286120;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8947942	8948252	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=NA12877_ch_T0000633;gene_id=NA12877_ch_G0000192;Parent=NA12877_ch_T0000633;transcript_name=NA12877_ch_T0000633;gene_name=ENSG00000286120;ID=exon:NA12877_ch_T0000633:1;Name=ENSG00000286120;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8949206	8952002	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;alternative_source_transcripts=ENST00000457222.6;gene_id=NA12877_ch_G0000193;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=NA12877_ch_G0000193;Name=TSPY3
NA12877_chrY	CAT	transcript	8949206	8952002	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_G0000193;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=NA12877_ch_T0000634;Name=TSPY3
NA12877_chrY	CAT	exon	8949206	8949737	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=exon:NA12877_ch_T0000634:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8949252	8949737	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000634:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8949252	8949254	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=start_codon:NA12877_ch_T0000634;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8949738	8950344	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=intron:NA12877_ch_T0000634:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8950345	8950422	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=exon:NA12877_ch_T0000634:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8950345	8950422	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000634:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8950423	8950550	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=intron:NA12877_ch_T0000634:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8950551	8950662	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=exon:NA12877_ch_T0000634:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8950551	8950662	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000634:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8950663	8950763	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=intron:NA12877_ch_T0000634:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8950764	8950909	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=exon:NA12877_ch_T0000634:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8950764	8950909	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000634:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8950910	8951015	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=intron:NA12877_ch_T0000634:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8951016	8951097	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=exon:NA12877_ch_T0000634:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8951016	8951097	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000634:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8951098	8951791	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=intron:NA12877_ch_T0000634:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8951792	8952002	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=exon:NA12877_ch_T0000634:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8951792	8951814	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000634:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8951812	8951814	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000634;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000634;transcript_name=NA12877_ch_T0000634;gene_name=TSPY3;ID=stop_codon:NA12877_ch_T0000634;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8949252	8952001	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_G0000193;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=NA12877_ch_T0000635;Name=TSPY3
NA12877_chrY	CAT	exon	8949252	8949737	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=exon:NA12877_ch_T0000635:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8949252	8949737	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000635:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8949252	8949254	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=start_codon:NA12877_ch_T0000635;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8949738	8950344	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=intron:NA12877_ch_T0000635:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8950345	8950422	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=exon:NA12877_ch_T0000635:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8950345	8950422	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000635:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8950423	8950550	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=intron:NA12877_ch_T0000635:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8950551	8950662	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=exon:NA12877_ch_T0000635:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8950551	8950662	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000635:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8950663	8950763	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=intron:NA12877_ch_T0000635:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8950764	8950909	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=exon:NA12877_ch_T0000635:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8950764	8950909	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000635:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8950910	8951004	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=intron:NA12877_ch_T0000635:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8951005	8951097	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=exon:NA12877_ch_T0000635:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8951005	8951067	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000635:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8951065	8951067	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=stop_codon:NA12877_ch_T0000635;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8951098	8951791	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=intron:NA12877_ch_T0000635:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8951792	8952001	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000635;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000635;transcript_name=NA12877_ch_T0000635;gene_name=TSPY3;ID=exon:NA12877_ch_T0000635:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8949252	8951814	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_G0000193;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=NA12877_ch_T0000636;Name=TSPY3
NA12877_chrY	CAT	exon	8949252	8949338	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=exon:NA12877_ch_T0000636:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8949252	8949338	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000636:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8949252	8949254	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=start_codon:NA12877_ch_T0000636;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8949339	8949599	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=intron:NA12877_ch_T0000636:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8949600	8949737	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=exon:NA12877_ch_T0000636:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8949600	8949737	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000636:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8949738	8950344	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=intron:NA12877_ch_T0000636:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8950345	8950422	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=exon:NA12877_ch_T0000636:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8950345	8950422	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000636:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8950423	8950550	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=intron:NA12877_ch_T0000636:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8950551	8950662	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=exon:NA12877_ch_T0000636:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8950551	8950662	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000636:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8950663	8950763	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=intron:NA12877_ch_T0000636:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8950764	8950909	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=exon:NA12877_ch_T0000636:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8950764	8950909	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000636:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8950910	8951015	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=intron:NA12877_ch_T0000636:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8951016	8951097	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=exon:NA12877_ch_T0000636:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8951016	8951097	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000636:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8951098	8951791	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=intron:NA12877_ch_T0000636:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8951792	8951814	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=exon:NA12877_ch_T0000636:6;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8951792	8951814	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000636:6;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8951812	8951814	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=NA12877_ch_T0000636;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000636;transcript_name=NA12877_ch_T0000636;gene_name=TSPY3;ID=stop_codon:NA12877_ch_T0000636;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8949252	8952008	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=299.947;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000637;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_G0000193;transcript_name=NA12877_ch_T0000637;gene_name=TSPY3;ID=NA12877_ch_T0000637;Name=TSPY3
NA12877_chrY	CAT	exon	8949252	8949737	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000637;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000637;transcript_name=NA12877_ch_T0000637;gene_name=TSPY3;ID=exon:NA12877_ch_T0000637:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8949738	8950344	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000637;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000637;transcript_name=NA12877_ch_T0000637;gene_name=TSPY3;ID=intron:NA12877_ch_T0000637:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8950345	8950422	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000637;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000637;transcript_name=NA12877_ch_T0000637;gene_name=TSPY3;ID=exon:NA12877_ch_T0000637:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8950423	8950550	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000637;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000637;transcript_name=NA12877_ch_T0000637;gene_name=TSPY3;ID=intron:NA12877_ch_T0000637:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8950551	8951097	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000637;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000637;transcript_name=NA12877_ch_T0000637;gene_name=TSPY3;ID=exon:NA12877_ch_T0000637:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8951098	8951224	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000637;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000637;transcript_name=NA12877_ch_T0000637;gene_name=TSPY3;ID=intron:NA12877_ch_T0000637:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8951225	8952008	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000637;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000637;transcript_name=NA12877_ch_T0000637;gene_name=TSPY3;ID=exon:NA12877_ch_T0000637:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8950612	8951993	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=299.831;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=NA12877_ch_T0000638;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_G0000193;transcript_name=NA12877_ch_T0000638;gene_name=TSPY3;ID=NA12877_ch_T0000638;Name=TSPY3
NA12877_chrY	CAT	exon	8950612	8950909	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=NA12877_ch_T0000638;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000638;transcript_name=NA12877_ch_T0000638;gene_name=TSPY3;ID=exon:NA12877_ch_T0000638:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8950910	8951004	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=NA12877_ch_T0000638;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000638;transcript_name=NA12877_ch_T0000638;gene_name=TSPY3;ID=intron:NA12877_ch_T0000638:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8951005	8951097	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=NA12877_ch_T0000638;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000638;transcript_name=NA12877_ch_T0000638;gene_name=TSPY3;ID=exon:NA12877_ch_T0000638:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8951098	8951791	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=NA12877_ch_T0000638;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000638;transcript_name=NA12877_ch_T0000638;gene_name=TSPY3;ID=intron:NA12877_ch_T0000638:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8951792	8951993	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=299.831;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=NA12877_ch_T0000638;gene_id=NA12877_ch_G0000193;Parent=NA12877_ch_T0000638;transcript_name=NA12877_ch_T0000638;gene_name=TSPY3;ID=exon:NA12877_ch_T0000638:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8959201	8967093	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7;gene_id=NA12877_ch_G0000194;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=NA12877_ch_G0000194;Name=FAM197Y7
NA12877_chrY	CAT	transcript	8959201	8967093	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000639;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_G0000194;transcript_name=NA12877_ch_T0000639;gene_name=FAM197Y7;ID=NA12877_ch_T0000639;Name=FAM197Y7
NA12877_chrY	CAT	exon	8959201	8961324	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000639;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000639;transcript_name=NA12877_ch_T0000639;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000639:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8961325	8964875	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000639;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000639;transcript_name=NA12877_ch_T0000639;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000639:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8964876	8964961	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000639;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000639;transcript_name=NA12877_ch_T0000639;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000639:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8964962	8966772	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000639;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000639;transcript_name=NA12877_ch_T0000639;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000639:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8966773	8966882	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000639;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000639;transcript_name=NA12877_ch_T0000639;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000639:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8966883	8967078	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000639;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000639;transcript_name=NA12877_ch_T0000639;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000639:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8967079	8967093	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000639;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000639;transcript_name=NA12877_ch_T0000639;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000639:3;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8961265	8966874	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000640;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_G0000194;transcript_name=NA12877_ch_T0000640;gene_name=FAM197Y7;ID=NA12877_ch_T0000640;Name=FAM197Y7
NA12877_chrY	CAT	exon	8961265	8961324	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000640;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000640;transcript_name=NA12877_ch_T0000640;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000640:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8961325	8964875	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000640;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000640;transcript_name=NA12877_ch_T0000640;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000640:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8964876	8965034	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000640;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000640;transcript_name=NA12877_ch_T0000640;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000640:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8965035	8966540	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000640;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000640;transcript_name=NA12877_ch_T0000640;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000640:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8966541	8966686	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000640;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000640;transcript_name=NA12877_ch_T0000640;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000640:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8966687	8966772	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000640;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000640;transcript_name=NA12877_ch_T0000640;gene_name=FAM197Y7;ID=intron:NA12877_ch_T0000640:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8966773	8966874	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=NA12877_ch_T0000640;gene_id=NA12877_ch_G0000194;Parent=NA12877_ch_T0000640;transcript_name=NA12877_ch_T0000640;gene_name=FAM197Y7;ID=exon:NA12877_ch_T0000640:3;Name=FAM197Y7;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8966541	8968533	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1;gene_id=NA12877_ch_G0000195;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=NA12877_ch_G0000195;Name=ENSG00000286120
NA12877_chrY	CAT	transcript	8966541	8968533	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=NA12877_ch_T0000641;gene_id=NA12877_ch_G0000195;Parent=NA12877_ch_G0000195;transcript_name=NA12877_ch_T0000641;gene_name=ENSG00000286120;ID=NA12877_ch_T0000641;Name=ENSG00000286120
NA12877_chrY	CAT	exon	8966541	8966686	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=NA12877_ch_T0000641;gene_id=NA12877_ch_G0000195;Parent=NA12877_ch_T0000641;transcript_name=NA12877_ch_T0000641;gene_name=ENSG00000286120;ID=exon:NA12877_ch_T0000641:0;Name=ENSG00000286120;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8966687	8968222	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=NA12877_ch_T0000641;gene_id=NA12877_ch_G0000195;Parent=NA12877_ch_T0000641;transcript_name=NA12877_ch_T0000641;gene_name=ENSG00000286120;ID=intron:NA12877_ch_T0000641:0;Name=ENSG00000286120;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8968223	8968533	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=NA12877_ch_T0000641;gene_id=NA12877_ch_G0000195;Parent=NA12877_ch_T0000641;transcript_name=NA12877_ch_T0000641;gene_name=ENSG00000286120;ID=exon:NA12877_ch_T0000641:1;Name=ENSG00000286120;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8969487	8972283	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;alternative_source_transcripts=ENST00000457222.6;gene_id=NA12877_ch_G0000196;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA12877_ch_G0000196;Name=TSPY10
NA12877_chrY	CAT	transcript	8969487	8972283	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_G0000196;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=NA12877_ch_T0000642;Name=TSPY10
NA12877_chrY	CAT	exon	8969487	8970018	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=exon:NA12877_ch_T0000642:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8969533	8970018	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000642:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8969533	8969535	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=start_codon:NA12877_ch_T0000642;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8970019	8970625	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=intron:NA12877_ch_T0000642:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8970626	8970703	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=exon:NA12877_ch_T0000642:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8970626	8970703	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000642:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8970704	8970831	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=intron:NA12877_ch_T0000642:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8970832	8970943	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=exon:NA12877_ch_T0000642:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8970832	8970943	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000642:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8970944	8971044	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=intron:NA12877_ch_T0000642:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8971045	8971190	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=exon:NA12877_ch_T0000642:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8971045	8971190	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000642:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8971191	8971296	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=intron:NA12877_ch_T0000642:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8971297	8971378	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=exon:NA12877_ch_T0000642:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8971297	8971378	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000642:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8971379	8972072	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=intron:NA12877_ch_T0000642:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8972073	8972283	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=exon:NA12877_ch_T0000642:5;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8972073	8972095	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000642:5;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8972093	8972095	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000457222.6;transcript_id=NA12877_ch_T0000642;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000642;transcript_name=NA12877_ch_T0000642;gene_name=TSPY10;ID=stop_codon:NA12877_ch_T0000642;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8969533	8972282	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_G0000196;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=NA12877_ch_T0000643;Name=TSPY10
NA12877_chrY	CAT	exon	8969533	8970018	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=exon:NA12877_ch_T0000643:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8969533	8970018	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000643:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8969533	8969535	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=start_codon:NA12877_ch_T0000643;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8970019	8970625	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=intron:NA12877_ch_T0000643:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8970626	8970703	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=exon:NA12877_ch_T0000643:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8970626	8970703	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000643:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8970704	8970831	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=intron:NA12877_ch_T0000643:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8970832	8970943	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=exon:NA12877_ch_T0000643:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8970832	8970943	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000643:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8970944	8971044	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=intron:NA12877_ch_T0000643:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8971045	8971190	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=exon:NA12877_ch_T0000643:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8971045	8971190	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000643:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8971191	8971285	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=intron:NA12877_ch_T0000643:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8971286	8971378	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=exon:NA12877_ch_T0000643:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8971286	8971348	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000643:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8971346	8971348	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=stop_codon:NA12877_ch_T0000643;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8971379	8972072	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=intron:NA12877_ch_T0000643:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8972073	8972282	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000424594.1;transcript_id=NA12877_ch_T0000643;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000643;transcript_name=NA12877_ch_T0000643;gene_name=TSPY10;ID=exon:NA12877_ch_T0000643:5;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8969533	8972289	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000644;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_G0000196;transcript_name=NA12877_ch_T0000644;gene_name=TSPY10;ID=NA12877_ch_T0000644;Name=TSPY10
NA12877_chrY	CAT	exon	8969533	8970018	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000644;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000644;transcript_name=NA12877_ch_T0000644;gene_name=TSPY10;ID=exon:NA12877_ch_T0000644:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8970019	8970625	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000644;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000644;transcript_name=NA12877_ch_T0000644;gene_name=TSPY10;ID=intron:NA12877_ch_T0000644:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8970626	8970703	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000644;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000644;transcript_name=NA12877_ch_T0000644;gene_name=TSPY10;ID=exon:NA12877_ch_T0000644:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8970704	8970831	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000644;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000644;transcript_name=NA12877_ch_T0000644;gene_name=TSPY10;ID=intron:NA12877_ch_T0000644:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8970832	8971378	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000644;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000644;transcript_name=NA12877_ch_T0000644;gene_name=TSPY10;ID=exon:NA12877_ch_T0000644:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8971379	8971505	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000644;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000644;transcript_name=NA12877_ch_T0000644;gene_name=TSPY10;ID=intron:NA12877_ch_T0000644:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8971506	8972289	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000491844.1;transcript_id=NA12877_ch_T0000644;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000644;transcript_name=NA12877_ch_T0000644;gene_name=TSPY10;ID=exon:NA12877_ch_T0000644:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8970893	8972274	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000645;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_G0000196;transcript_name=NA12877_ch_T0000645;gene_name=TSPY10;ID=NA12877_ch_T0000645;Name=TSPY10
NA12877_chrY	CAT	exon	8970893	8971190	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000645;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000645;transcript_name=NA12877_ch_T0000645;gene_name=TSPY10;ID=exon:NA12877_ch_T0000645:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8971191	8971296	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000645;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000645;transcript_name=NA12877_ch_T0000645;gene_name=TSPY10;ID=intron:NA12877_ch_T0000645:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8971297	8971378	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000645;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000645;transcript_name=NA12877_ch_T0000645;gene_name=TSPY10;ID=exon:NA12877_ch_T0000645:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8971379	8972072	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000645;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000645;transcript_name=NA12877_ch_T0000645;gene_name=TSPY10;ID=intron:NA12877_ch_T0000645:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8972073	8972274	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000645;gene_id=NA12877_ch_G0000196;Parent=NA12877_ch_T0000645;transcript_name=NA12877_ch_T0000645;gene_name=TSPY10;ID=exon:NA12877_ch_T0000645:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8979487	8987175	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_4;gene_id=NA12877_ch_G0000197;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000197;Name=FAM197Y9
NA12877_chrY	CAT	transcript	8979487	8987175	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000646;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_G0000197;transcript_name=NA12877_ch_T0000646;gene_name=FAM197Y9;ID=NA12877_ch_T0000646;Name=FAM197Y9
NA12877_chrY	CAT	exon	8979487	8981614	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000646;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_T0000646;transcript_name=NA12877_ch_T0000646;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000646:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8981615	8985162	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000646;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_T0000646;transcript_name=NA12877_ch_T0000646;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000646:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8985163	8985248	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000646;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_T0000646;transcript_name=NA12877_ch_T0000646;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000646:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8985249	8987055	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000646;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_T0000646;transcript_name=NA12877_ch_T0000646;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000646:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8987056	8987175	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000646;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_T0000646;transcript_name=NA12877_ch_T0000646;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000646:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8981555	8987157	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000647;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_G0000197;transcript_name=NA12877_ch_T0000647;gene_name=FAM197Y9;ID=NA12877_ch_T0000647;Name=FAM197Y9
NA12877_chrY	CAT	exon	8981555	8981614	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000647;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_T0000647;transcript_name=NA12877_ch_T0000647;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000647:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8981615	8985162	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000647;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_T0000647;transcript_name=NA12877_ch_T0000647;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000647:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8985163	8985321	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000647;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_T0000647;transcript_name=NA12877_ch_T0000647;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000647:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8985322	8986823	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000647;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_T0000647;transcript_name=NA12877_ch_T0000647;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000647:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8986824	8986969	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000647;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_T0000647;transcript_name=NA12877_ch_T0000647;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000647:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8986970	8987055	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000647;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_T0000647;transcript_name=NA12877_ch_T0000647;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000647:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8987056	8987157	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000647;gene_id=NA12877_ch_G0000197;Parent=NA12877_ch_T0000647;transcript_name=NA12877_ch_T0000647;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000647:3;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8986824	8988817	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_5;gene_id=NA12877_ch_G0000198;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000198;Name=FAM197Y9
NA12877_chrY	CAT	transcript	8986824	8988817	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000648;gene_id=NA12877_ch_G0000198;Parent=NA12877_ch_G0000198;transcript_name=NA12877_ch_T0000648;gene_name=FAM197Y9;ID=NA12877_ch_T0000648;Name=FAM197Y9
NA12877_chrY	CAT	exon	8986824	8986969	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000648;gene_id=NA12877_ch_G0000198;Parent=NA12877_ch_T0000648;transcript_name=NA12877_ch_T0000648;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000648:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8986970	8987081	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000648;gene_id=NA12877_ch_G0000198;Parent=NA12877_ch_T0000648;transcript_name=NA12877_ch_T0000648;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000648:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8987082	8987165	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000648;gene_id=NA12877_ch_G0000198;Parent=NA12877_ch_T0000648;transcript_name=NA12877_ch_T0000648;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000648:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8987166	8988507	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000648;gene_id=NA12877_ch_G0000198;Parent=NA12877_ch_T0000648;transcript_name=NA12877_ch_T0000648;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000648:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8988508	8988817	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000648;gene_id=NA12877_ch_G0000198;Parent=NA12877_ch_T0000648;transcript_name=NA12877_ch_T0000648;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000648:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8989766	8992562	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=NA12877_ch_G0000199;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA12877_ch_G0000199;Name=TSPY10
NA12877_chrY	CAT	transcript	8989766	8992562	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_G0000199;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=NA12877_ch_T0000649;Name=TSPY10
NA12877_chrY	CAT	exon	8989766	8990297	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=exon:NA12877_ch_T0000649:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8989812	8990297	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000649:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8989812	8989814	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=start_codon:NA12877_ch_T0000649;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8990298	8990904	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=intron:NA12877_ch_T0000649:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8990905	8990982	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=exon:NA12877_ch_T0000649:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8990905	8990982	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000649:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8990983	8991110	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=intron:NA12877_ch_T0000649:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8991111	8991222	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=exon:NA12877_ch_T0000649:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8991111	8991222	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000649:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8991223	8991323	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=intron:NA12877_ch_T0000649:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8991324	8991469	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=exon:NA12877_ch_T0000649:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8991324	8991469	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000649:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8991470	8991575	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=intron:NA12877_ch_T0000649:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8991576	8991657	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=exon:NA12877_ch_T0000649:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8991576	8991657	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000649:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8991658	8992351	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=intron:NA12877_ch_T0000649:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8992352	8992562	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=exon:NA12877_ch_T0000649:5;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8992352	8992374	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000649:5;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8992372	8992374	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000649;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000649;transcript_name=NA12877_ch_T0000649;gene_name=TSPY10;ID=stop_codon:NA12877_ch_T0000649;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8989812	8992561	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_G0000199;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=NA12877_ch_T0000650;Name=TSPY10
NA12877_chrY	CAT	exon	8989812	8990297	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=exon:NA12877_ch_T0000650:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8989812	8990297	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000650:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	8989812	8989814	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=start_codon:NA12877_ch_T0000650;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8990298	8990904	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=intron:NA12877_ch_T0000650:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8990905	8990982	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=exon:NA12877_ch_T0000650:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8990905	8990982	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000650:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8990983	8991110	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=intron:NA12877_ch_T0000650:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8991111	8991222	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=exon:NA12877_ch_T0000650:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8991111	8991222	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000650:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8991223	8991323	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=intron:NA12877_ch_T0000650:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8991324	8991469	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=exon:NA12877_ch_T0000650:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8991324	8991469	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000650:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8991470	8991564	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=intron:NA12877_ch_T0000650:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8991565	8991657	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=exon:NA12877_ch_T0000650:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	8991565	8991627	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000650:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	8991625	8991627	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=stop_codon:NA12877_ch_T0000650;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8991658	8992351	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=intron:NA12877_ch_T0000650:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8992352	8992561	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000650;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000650;transcript_name=NA12877_ch_T0000650;gene_name=TSPY10;ID=exon:NA12877_ch_T0000650:5;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8989812	8992568	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000651;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_G0000199;transcript_name=NA12877_ch_T0000651;gene_name=TSPY10;ID=NA12877_ch_T0000651;Name=TSPY10
NA12877_chrY	CAT	exon	8989812	8990297	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000651;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000651;transcript_name=NA12877_ch_T0000651;gene_name=TSPY10;ID=exon:NA12877_ch_T0000651:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8990298	8990904	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000651;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000651;transcript_name=NA12877_ch_T0000651;gene_name=TSPY10;ID=intron:NA12877_ch_T0000651:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8990905	8990982	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000651;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000651;transcript_name=NA12877_ch_T0000651;gene_name=TSPY10;ID=exon:NA12877_ch_T0000651:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8990983	8991110	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000651;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000651;transcript_name=NA12877_ch_T0000651;gene_name=TSPY10;ID=intron:NA12877_ch_T0000651:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8991111	8991657	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000651;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000651;transcript_name=NA12877_ch_T0000651;gene_name=TSPY10;ID=exon:NA12877_ch_T0000651:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8991658	8991784	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000651;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000651;transcript_name=NA12877_ch_T0000651;gene_name=TSPY10;ID=intron:NA12877_ch_T0000651:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8991785	8992568	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000651;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000651;transcript_name=NA12877_ch_T0000651;gene_name=TSPY10;ID=exon:NA12877_ch_T0000651:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	8991172	8992553	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000652;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_G0000199;transcript_name=NA12877_ch_T0000652;gene_name=TSPY10;ID=NA12877_ch_T0000652;Name=TSPY10
NA12877_chrY	CAT	exon	8991172	8991469	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000652;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000652;transcript_name=NA12877_ch_T0000652;gene_name=TSPY10;ID=exon:NA12877_ch_T0000652:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8991470	8991575	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000652;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000652;transcript_name=NA12877_ch_T0000652;gene_name=TSPY10;ID=intron:NA12877_ch_T0000652:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8991576	8991657	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000652;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000652;transcript_name=NA12877_ch_T0000652;gene_name=TSPY10;ID=exon:NA12877_ch_T0000652:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	8991658	8992351	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000652;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000652;transcript_name=NA12877_ch_T0000652;gene_name=TSPY10;ID=intron:NA12877_ch_T0000652:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	8992352	8992553	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000652;gene_id=NA12877_ch_G0000199;Parent=NA12877_ch_T0000652;transcript_name=NA12877_ch_T0000652;gene_name=TSPY10;ID=exon:NA12877_ch_T0000652:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	8999770	9007460	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_3;gene_id=NA12877_ch_G0000200;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000200;Name=FAM197Y9
NA12877_chrY	CAT	transcript	8999770	9007460	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000653;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_G0000200;transcript_name=NA12877_ch_T0000653;gene_name=FAM197Y9;ID=NA12877_ch_T0000653;Name=FAM197Y9
NA12877_chrY	CAT	exon	8999770	9001897	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000653;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_T0000653;transcript_name=NA12877_ch_T0000653;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000653:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9001898	9005447	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000653;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_T0000653;transcript_name=NA12877_ch_T0000653;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000653:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9005448	9005533	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000653;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_T0000653;transcript_name=NA12877_ch_T0000653;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000653:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9005534	9007340	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000653;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_T0000653;transcript_name=NA12877_ch_T0000653;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000653:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9007341	9007460	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000653;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_T0000653;transcript_name=NA12877_ch_T0000653;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000653:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9001838	9007442	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000654;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_G0000200;transcript_name=NA12877_ch_T0000654;gene_name=FAM197Y9;ID=NA12877_ch_T0000654;Name=FAM197Y9
NA12877_chrY	CAT	exon	9001838	9001897	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000654;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_T0000654;transcript_name=NA12877_ch_T0000654;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000654:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9001898	9005447	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000654;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_T0000654;transcript_name=NA12877_ch_T0000654;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000654:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9005448	9005606	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000654;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_T0000654;transcript_name=NA12877_ch_T0000654;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000654:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9005607	9007108	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000654;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_T0000654;transcript_name=NA12877_ch_T0000654;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000654:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9007109	9007254	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000654;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_T0000654;transcript_name=NA12877_ch_T0000654;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000654:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9007255	9007340	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000654;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_T0000654;transcript_name=NA12877_ch_T0000654;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000654:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9007341	9007442	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000654;gene_id=NA12877_ch_G0000200;Parent=NA12877_ch_T0000654;transcript_name=NA12877_ch_T0000654;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000654:3;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9007109	9009102	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_6;gene_id=NA12877_ch_G0000201;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000201;Name=FAM197Y9
NA12877_chrY	CAT	transcript	9007109	9009102	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000655;gene_id=NA12877_ch_G0000201;Parent=NA12877_ch_G0000201;transcript_name=NA12877_ch_T0000655;gene_name=FAM197Y9;ID=NA12877_ch_T0000655;Name=FAM197Y9
NA12877_chrY	CAT	exon	9007109	9007254	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000655;gene_id=NA12877_ch_G0000201;Parent=NA12877_ch_T0000655;transcript_name=NA12877_ch_T0000655;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000655:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9007255	9007366	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000655;gene_id=NA12877_ch_G0000201;Parent=NA12877_ch_T0000655;transcript_name=NA12877_ch_T0000655;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000655:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9007367	9007450	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000655;gene_id=NA12877_ch_G0000201;Parent=NA12877_ch_T0000655;transcript_name=NA12877_ch_T0000655;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000655:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9007451	9008792	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000655;gene_id=NA12877_ch_G0000201;Parent=NA12877_ch_T0000655;transcript_name=NA12877_ch_T0000655;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000655:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9008793	9009102	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000655;gene_id=NA12877_ch_G0000201;Parent=NA12877_ch_T0000655;transcript_name=NA12877_ch_T0000655;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000655:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9010055	9012851	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=NA12877_ch_G0000202;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA12877_ch_G0000202;Name=TSPY10
NA12877_chrY	CAT	transcript	9010055	9012851	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_G0000202;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=NA12877_ch_T0000656;Name=TSPY10
NA12877_chrY	CAT	exon	9010055	9010586	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=exon:NA12877_ch_T0000656:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9010101	9010586	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000656:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9010101	9010103	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=start_codon:NA12877_ch_T0000656;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9010587	9011193	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=intron:NA12877_ch_T0000656:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9011194	9011271	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=exon:NA12877_ch_T0000656:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9011194	9011271	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000656:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9011272	9011399	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=intron:NA12877_ch_T0000656:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9011400	9011511	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=exon:NA12877_ch_T0000656:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9011400	9011511	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000656:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9011512	9011612	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=intron:NA12877_ch_T0000656:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9011613	9011758	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=exon:NA12877_ch_T0000656:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9011613	9011758	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000656:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9011759	9011864	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=intron:NA12877_ch_T0000656:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9011865	9011946	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=exon:NA12877_ch_T0000656:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9011865	9011946	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000656:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9011947	9012640	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=intron:NA12877_ch_T0000656:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9012641	9012851	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=exon:NA12877_ch_T0000656:5;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9012641	9012663	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000656:5;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9012661	9012663	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000656;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000656;transcript_name=NA12877_ch_T0000656;gene_name=TSPY10;ID=stop_codon:NA12877_ch_T0000656;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9010101	9012850	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_G0000202;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=NA12877_ch_T0000657;Name=TSPY10
NA12877_chrY	CAT	exon	9010101	9010586	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=exon:NA12877_ch_T0000657:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9010101	9010586	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000657:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9010101	9010103	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=start_codon:NA12877_ch_T0000657;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9010587	9011193	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=intron:NA12877_ch_T0000657:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9011194	9011271	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=exon:NA12877_ch_T0000657:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9011194	9011271	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000657:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9011272	9011399	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=intron:NA12877_ch_T0000657:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9011400	9011511	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=exon:NA12877_ch_T0000657:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9011400	9011511	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000657:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9011512	9011612	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=intron:NA12877_ch_T0000657:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9011613	9011758	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=exon:NA12877_ch_T0000657:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9011613	9011758	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000657:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9011759	9011853	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=intron:NA12877_ch_T0000657:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9011854	9011946	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=exon:NA12877_ch_T0000657:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9011854	9011916	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000657:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9011914	9011916	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=stop_codon:NA12877_ch_T0000657;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9011947	9012640	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=intron:NA12877_ch_T0000657:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9012641	9012850	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000657;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000657;transcript_name=NA12877_ch_T0000657;gene_name=TSPY10;ID=exon:NA12877_ch_T0000657:5;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9010101	9012857	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000658;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_G0000202;transcript_name=NA12877_ch_T0000658;gene_name=TSPY10;ID=NA12877_ch_T0000658;Name=TSPY10
NA12877_chrY	CAT	exon	9010101	9010586	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000658;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000658;transcript_name=NA12877_ch_T0000658;gene_name=TSPY10;ID=exon:NA12877_ch_T0000658:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9010587	9011193	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000658;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000658;transcript_name=NA12877_ch_T0000658;gene_name=TSPY10;ID=intron:NA12877_ch_T0000658:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9011194	9011271	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000658;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000658;transcript_name=NA12877_ch_T0000658;gene_name=TSPY10;ID=exon:NA12877_ch_T0000658:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9011272	9011399	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000658;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000658;transcript_name=NA12877_ch_T0000658;gene_name=TSPY10;ID=intron:NA12877_ch_T0000658:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9011400	9011946	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000658;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000658;transcript_name=NA12877_ch_T0000658;gene_name=TSPY10;ID=exon:NA12877_ch_T0000658:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9011947	9012073	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000658;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000658;transcript_name=NA12877_ch_T0000658;gene_name=TSPY10;ID=intron:NA12877_ch_T0000658:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9012074	9012857	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=299.789;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000658;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000658;transcript_name=NA12877_ch_T0000658;gene_name=TSPY10;ID=exon:NA12877_ch_T0000658:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9011461	9012842	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000659;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_G0000202;transcript_name=NA12877_ch_T0000659;gene_name=TSPY10;ID=NA12877_ch_T0000659;Name=TSPY10
NA12877_chrY	CAT	exon	9011461	9011758	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000659;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000659;transcript_name=NA12877_ch_T0000659;gene_name=TSPY10;ID=exon:NA12877_ch_T0000659:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9011759	9011864	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000659;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000659;transcript_name=NA12877_ch_T0000659;gene_name=TSPY10;ID=intron:NA12877_ch_T0000659:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9011865	9011946	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000659;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000659;transcript_name=NA12877_ch_T0000659;gene_name=TSPY10;ID=exon:NA12877_ch_T0000659:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9011947	9012640	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000659;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000659;transcript_name=NA12877_ch_T0000659;gene_name=TSPY10;ID=intron:NA12877_ch_T0000659:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9012641	9012842	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000659;gene_id=NA12877_ch_G0000202;Parent=NA12877_ch_T0000659;transcript_name=NA12877_ch_T0000659;gene_name=TSPY10;ID=exon:NA12877_ch_T0000659:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9021982	9027717	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=NA12877_ch_G0000203;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000203;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9021982	9027717	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000660;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_G0000203;transcript_name=NA12877_ch_T0000660;gene_name=FAM197Y5;ID=NA12877_ch_T0000660;Name=FAM197Y5
NA12877_chrY	CAT	exon	9021982	9022171	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000660;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_T0000660;transcript_name=NA12877_ch_T0000660;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000660:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9022172	9025720	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000660;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_T0000660;transcript_name=NA12877_ch_T0000660;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000660:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9025721	9025806	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000660;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_T0000660;transcript_name=NA12877_ch_T0000660;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000660:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9025807	9027603	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000660;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_T0000660;transcript_name=NA12877_ch_T0000660;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000660:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9027604	9027717	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000660;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_T0000660;transcript_name=NA12877_ch_T0000660;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000660:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9022112	9027705	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000661;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_G0000203;transcript_name=NA12877_ch_T0000661;gene_name=FAM197Y5;ID=NA12877_ch_T0000661;Name=FAM197Y5
NA12877_chrY	CAT	exon	9022112	9022171	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000661;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_T0000661;transcript_name=NA12877_ch_T0000661;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000661:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9022172	9025720	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000661;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_T0000661;transcript_name=NA12877_ch_T0000661;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000661:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9025721	9025879	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000661;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_T0000661;transcript_name=NA12877_ch_T0000661;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000661:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9025880	9027371	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000661;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_T0000661;transcript_name=NA12877_ch_T0000661;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000661:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9027372	9027517	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000661;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_T0000661;transcript_name=NA12877_ch_T0000661;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000661:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9027518	9027603	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000661;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_T0000661;transcript_name=NA12877_ch_T0000661;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000661:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9027604	9027705	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000661;gene_id=NA12877_ch_G0000203;Parent=NA12877_ch_T0000661;transcript_name=NA12877_ch_T0000661;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000661:3;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9027372	9029364	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8;gene_id=NA12877_ch_G0000204;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000204;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9027372	9029364	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000662;gene_id=NA12877_ch_G0000204;Parent=NA12877_ch_G0000204;transcript_name=NA12877_ch_T0000662;gene_name=FAM197Y5;ID=NA12877_ch_T0000662;Name=FAM197Y5
NA12877_chrY	CAT	exon	9027372	9027517	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000662;gene_id=NA12877_ch_G0000204;Parent=NA12877_ch_T0000662;transcript_name=NA12877_ch_T0000662;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000662:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9027518	9029053	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000662;gene_id=NA12877_ch_G0000204;Parent=NA12877_ch_T0000662;transcript_name=NA12877_ch_T0000662;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000662:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9029054	9029364	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000662;gene_id=NA12877_ch_G0000204;Parent=NA12877_ch_T0000662;transcript_name=NA12877_ch_T0000662;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000662:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9030318	9033132	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=NA12877_ch_G0000205;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=NA12877_ch_G0000205;Name=TSPY4
NA12877_chrY	CAT	transcript	9030318	9033132	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_G0000205;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=NA12877_ch_T0000663;Name=TSPY4
NA12877_chrY	CAT	exon	9030318	9030867	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=exon:NA12877_ch_T0000663:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9030364	9030867	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000663:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9030364	9030366	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=start_codon:NA12877_ch_T0000663;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9030868	9031474	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=intron:NA12877_ch_T0000663:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9031475	9031552	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=exon:NA12877_ch_T0000663:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9031475	9031552	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000663:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9031553	9031680	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=intron:NA12877_ch_T0000663:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9031681	9031792	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=exon:NA12877_ch_T0000663:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9031681	9031792	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000663:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9031793	9031893	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=intron:NA12877_ch_T0000663:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9031894	9032039	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=exon:NA12877_ch_T0000663:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9031894	9032039	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000663:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9032040	9032145	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=intron:NA12877_ch_T0000663:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9032146	9032227	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=exon:NA12877_ch_T0000663:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9032146	9032227	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000663:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9032228	9032921	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=intron:NA12877_ch_T0000663:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9032922	9033132	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=exon:NA12877_ch_T0000663:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9032922	9032944	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000663:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9032942	9032944	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000663;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000663;transcript_name=NA12877_ch_T0000663;gene_name=TSPY4;ID=stop_codon:NA12877_ch_T0000663;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9030318	9033011	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_G0000205;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=NA12877_ch_T0000664;Name=TSPY4
NA12877_chrY	CAT	exon	9030318	9030450	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=exon:NA12877_ch_T0000664:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9030364	9030450	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000664:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9030364	9030366	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=start_codon:NA12877_ch_T0000664;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9030451	9030729	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=intron:NA12877_ch_T0000664:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9030730	9030867	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=exon:NA12877_ch_T0000664:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9030730	9030867	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000664:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9030868	9031474	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=intron:NA12877_ch_T0000664:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9031475	9031552	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=exon:NA12877_ch_T0000664:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9031475	9031552	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000664:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9031553	9031680	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=intron:NA12877_ch_T0000664:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9031681	9031792	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=exon:NA12877_ch_T0000664:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9031681	9031792	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000664:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9031793	9031893	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=intron:NA12877_ch_T0000664:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9031894	9032039	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=exon:NA12877_ch_T0000664:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9031894	9032039	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000664:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9032040	9032145	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=intron:NA12877_ch_T0000664:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9032146	9032227	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=exon:NA12877_ch_T0000664:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9032146	9032227	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000664:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9032228	9032921	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=intron:NA12877_ch_T0000664:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9032922	9033011	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=exon:NA12877_ch_T0000664:6;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9032922	9032944	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000664:6;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9032942	9032944	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000664;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000664;transcript_name=NA12877_ch_T0000664;gene_name=TSPY4;ID=stop_codon:NA12877_ch_T0000664;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9030364	9033131	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_G0000205;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=NA12877_ch_T0000665;Name=TSPY4
NA12877_chrY	CAT	exon	9030364	9030867	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=exon:NA12877_ch_T0000665:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9030364	9030867	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000665:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9030364	9030366	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=start_codon:NA12877_ch_T0000665;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9030868	9031474	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=intron:NA12877_ch_T0000665:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9031475	9031552	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=exon:NA12877_ch_T0000665:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9031475	9031552	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000665:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9031553	9031680	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=intron:NA12877_ch_T0000665:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9031681	9031792	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=exon:NA12877_ch_T0000665:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9031681	9031792	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000665:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9031793	9031893	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=intron:NA12877_ch_T0000665:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9031894	9032039	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=exon:NA12877_ch_T0000665:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9031894	9032039	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000665:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9032040	9032134	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=intron:NA12877_ch_T0000665:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9032135	9032227	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=exon:NA12877_ch_T0000665:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9032135	9032197	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=CDS:NA12877_ch_T0000665:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9032195	9032197	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=stop_codon:NA12877_ch_T0000665;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9032228	9032921	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=intron:NA12877_ch_T0000665:4;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9032922	9033131	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000665;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000665;transcript_name=NA12877_ch_T0000665;gene_name=TSPY4;ID=exon:NA12877_ch_T0000665:5;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9030364	9033138	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000666;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_G0000205;transcript_name=NA12877_ch_T0000666;gene_name=TSPY4;ID=NA12877_ch_T0000666;Name=TSPY4
NA12877_chrY	CAT	exon	9030364	9030867	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000666;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000666;transcript_name=NA12877_ch_T0000666;gene_name=TSPY4;ID=exon:NA12877_ch_T0000666:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9030868	9031474	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000666;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000666;transcript_name=NA12877_ch_T0000666;gene_name=TSPY4;ID=intron:NA12877_ch_T0000666:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9031475	9031552	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000666;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000666;transcript_name=NA12877_ch_T0000666;gene_name=TSPY4;ID=exon:NA12877_ch_T0000666:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9031553	9031680	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000666;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000666;transcript_name=NA12877_ch_T0000666;gene_name=TSPY4;ID=intron:NA12877_ch_T0000666:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9031681	9032227	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000666;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000666;transcript_name=NA12877_ch_T0000666;gene_name=TSPY4;ID=exon:NA12877_ch_T0000666:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9032228	9032354	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000666;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000666;transcript_name=NA12877_ch_T0000666;gene_name=TSPY4;ID=intron:NA12877_ch_T0000666:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9032355	9033138	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000666;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000666;transcript_name=NA12877_ch_T0000666;gene_name=TSPY4;ID=exon:NA12877_ch_T0000666:3;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9031742	9033123	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000667;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_G0000205;transcript_name=NA12877_ch_T0000667;gene_name=TSPY4;ID=NA12877_ch_T0000667;Name=TSPY4
NA12877_chrY	CAT	exon	9031742	9032039	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000667;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000667;transcript_name=NA12877_ch_T0000667;gene_name=TSPY4;ID=exon:NA12877_ch_T0000667:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9032040	9032134	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000667;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000667;transcript_name=NA12877_ch_T0000667;gene_name=TSPY4;ID=intron:NA12877_ch_T0000667:0;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9032135	9032227	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000667;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000667;transcript_name=NA12877_ch_T0000667;gene_name=TSPY4;ID=exon:NA12877_ch_T0000667:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9032228	9032921	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000667;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000667;transcript_name=NA12877_ch_T0000667;gene_name=TSPY4;ID=intron:NA12877_ch_T0000667:1;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9032922	9033123	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=NA12877_ch_T0000667;gene_id=NA12877_ch_G0000205;Parent=NA12877_ch_T0000667;transcript_name=NA12877_ch_T0000667;gene_name=TSPY4;ID=exon:NA12877_ch_T0000667:2;Name=TSPY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9042278	9048021	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_7;gene_id=NA12877_ch_G0000206;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000206;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9042278	9048021	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000668;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_G0000206;transcript_name=NA12877_ch_T0000668;gene_name=FAM197Y5;ID=NA12877_ch_T0000668;Name=FAM197Y5
NA12877_chrY	CAT	exon	9042278	9042467	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000668;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_T0000668;transcript_name=NA12877_ch_T0000668;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000668:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9042468	9046016	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000668;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_T0000668;transcript_name=NA12877_ch_T0000668;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000668:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9046017	9046102	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000668;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_T0000668;transcript_name=NA12877_ch_T0000668;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000668:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9046103	9047907	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000668;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_T0000668;transcript_name=NA12877_ch_T0000668;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000668:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9047908	9048021	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000668;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_T0000668;transcript_name=NA12877_ch_T0000668;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000668:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9042408	9048009	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000669;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_G0000206;transcript_name=NA12877_ch_T0000669;gene_name=FAM197Y5;ID=NA12877_ch_T0000669;Name=FAM197Y5
NA12877_chrY	CAT	exon	9042408	9042467	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000669;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_T0000669;transcript_name=NA12877_ch_T0000669;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000669:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9042468	9046016	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000669;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_T0000669;transcript_name=NA12877_ch_T0000669;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000669:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9046017	9046175	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000669;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_T0000669;transcript_name=NA12877_ch_T0000669;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000669:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9046176	9047675	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000669;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_T0000669;transcript_name=NA12877_ch_T0000669;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000669:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9047676	9047821	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000669;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_T0000669;transcript_name=NA12877_ch_T0000669;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000669:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9047822	9047907	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000669;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_T0000669;transcript_name=NA12877_ch_T0000669;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000669:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9047908	9048009	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000669;gene_id=NA12877_ch_G0000206;Parent=NA12877_ch_T0000669;transcript_name=NA12877_ch_T0000669;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000669:3;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9047676	9049668	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_8;gene_id=NA12877_ch_G0000207;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000207;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9047676	9049668	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000670;gene_id=NA12877_ch_G0000207;Parent=NA12877_ch_G0000207;transcript_name=NA12877_ch_T0000670;gene_name=FAM197Y5;ID=NA12877_ch_T0000670;Name=FAM197Y5
NA12877_chrY	CAT	exon	9047676	9047821	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000670;gene_id=NA12877_ch_G0000207;Parent=NA12877_ch_T0000670;transcript_name=NA12877_ch_T0000670;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000670:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9047822	9049357	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000670;gene_id=NA12877_ch_G0000207;Parent=NA12877_ch_T0000670;transcript_name=NA12877_ch_T0000670;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000670:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9049358	9049668	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000670;gene_id=NA12877_ch_G0000207;Parent=NA12877_ch_T0000670;transcript_name=NA12877_ch_T0000670;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000670:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9050622	9053436	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=NA12877_ch_G0000208;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=NA12877_ch_G0000208;Name=TSPY9
NA12877_chrY	CAT	transcript	9050622	9053436	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_G0000208;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=NA12877_ch_T0000671;Name=TSPY9
NA12877_chrY	CAT	exon	9050622	9051171	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=exon:NA12877_ch_T0000671:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9050668	9051171	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000671:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9050668	9050670	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=start_codon:NA12877_ch_T0000671;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9051172	9051778	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=intron:NA12877_ch_T0000671:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9051779	9051856	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=exon:NA12877_ch_T0000671:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9051779	9051856	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000671:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9051857	9051984	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=intron:NA12877_ch_T0000671:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9051985	9052096	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=exon:NA12877_ch_T0000671:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9051985	9052096	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000671:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9052097	9052197	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=intron:NA12877_ch_T0000671:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9052198	9052343	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=exon:NA12877_ch_T0000671:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9052198	9052343	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000671:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9052344	9052449	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=intron:NA12877_ch_T0000671:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9052450	9052531	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=exon:NA12877_ch_T0000671:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9052450	9052531	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000671:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9052532	9053225	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=intron:NA12877_ch_T0000671:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9053226	9053436	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=exon:NA12877_ch_T0000671:5;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9053226	9053248	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000671:5;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9053246	9053248	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000671;gene_id=NA12877_ch_G0000208;Parent=NA12877_ch_T0000671;transcript_name=NA12877_ch_T0000671;gene_name=TSPY9;ID=stop_codon:NA12877_ch_T0000671;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9062603	9068351	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_6;gene_id=NA12877_ch_G0000209;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000209;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9062603	9068351	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000672;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_G0000209;transcript_name=NA12877_ch_T0000672;gene_name=FAM197Y5;ID=NA12877_ch_T0000672;Name=FAM197Y5
NA12877_chrY	CAT	exon	9062603	9062792	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000672;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_T0000672;transcript_name=NA12877_ch_T0000672;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000672:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9062793	9066346	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000672;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_T0000672;transcript_name=NA12877_ch_T0000672;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000672:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9066347	9066432	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000672;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_T0000672;transcript_name=NA12877_ch_T0000672;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000672:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9066433	9068237	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000672;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_T0000672;transcript_name=NA12877_ch_T0000672;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000672:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9068238	9068351	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000672;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_T0000672;transcript_name=NA12877_ch_T0000672;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000672:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9062733	9068339	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000673;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_G0000209;transcript_name=NA12877_ch_T0000673;gene_name=FAM197Y5;ID=NA12877_ch_T0000673;Name=FAM197Y5
NA12877_chrY	CAT	exon	9062733	9062792	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000673;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_T0000673;transcript_name=NA12877_ch_T0000673;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000673:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9062793	9066346	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000673;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_T0000673;transcript_name=NA12877_ch_T0000673;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000673:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9066347	9066505	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000673;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_T0000673;transcript_name=NA12877_ch_T0000673;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000673:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9066506	9068005	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000673;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_T0000673;transcript_name=NA12877_ch_T0000673;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000673:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9068006	9068151	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000673;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_T0000673;transcript_name=NA12877_ch_T0000673;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000673:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9068152	9068237	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000673;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_T0000673;transcript_name=NA12877_ch_T0000673;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000673:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9068238	9068339	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000673;gene_id=NA12877_ch_G0000209;Parent=NA12877_ch_T0000673;transcript_name=NA12877_ch_T0000673;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000673:3;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9068006	9069998	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_1;gene_id=NA12877_ch_G0000210;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000210;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9068006	9069998	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000674;gene_id=NA12877_ch_G0000210;Parent=NA12877_ch_G0000210;transcript_name=NA12877_ch_T0000674;gene_name=FAM197Y5;ID=NA12877_ch_T0000674;Name=FAM197Y5
NA12877_chrY	CAT	exon	9068006	9068151	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000674;gene_id=NA12877_ch_G0000210;Parent=NA12877_ch_T0000674;transcript_name=NA12877_ch_T0000674;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000674:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9068152	9069687	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000674;gene_id=NA12877_ch_G0000210;Parent=NA12877_ch_T0000674;transcript_name=NA12877_ch_T0000674;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000674:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9069688	9069998	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000674;gene_id=NA12877_ch_G0000210;Parent=NA12877_ch_T0000674;transcript_name=NA12877_ch_T0000674;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000674:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9070955	9073760	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1_4;gene_id=NA12877_ch_G0000211;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=NA12877_ch_G0000211;Name=ENSG00000301844
NA12877_chrY	CAT	transcript	9070955	9073760	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000675;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_G0000211;transcript_name=NA12877_ch_T0000675;gene_name=ENSG00000301844;ID=NA12877_ch_T0000675;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9070955	9071483	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000675;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000675;transcript_name=NA12877_ch_T0000675;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000675:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9071484	9072090	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000675;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000675;transcript_name=NA12877_ch_T0000675;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000675:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072091	9072168	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000675;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000675;transcript_name=NA12877_ch_T0000675;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000675:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072169	9072296	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000675;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000675;transcript_name=NA12877_ch_T0000675;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000675:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072297	9072408	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000675;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000675;transcript_name=NA12877_ch_T0000675;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000675:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072409	9072509	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000675;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000675;transcript_name=NA12877_ch_T0000675;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000675:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072510	9072655	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000675;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000675;transcript_name=NA12877_ch_T0000675;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000675:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072656	9072761	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000675;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000675;transcript_name=NA12877_ch_T0000675;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000675:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072762	9072843	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000675;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000675;transcript_name=NA12877_ch_T0000675;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000675:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072844	9073537	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000675;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000675;transcript_name=NA12877_ch_T0000675;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000675:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9073538	9073760	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000675;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000675;transcript_name=NA12877_ch_T0000675;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000675:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9070964	9073755	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000676;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_G0000211;transcript_name=NA12877_ch_T0000676;gene_name=ENSG00000301844;ID=NA12877_ch_T0000676;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9070964	9071483	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000676;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000676;transcript_name=NA12877_ch_T0000676;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000676:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9071484	9072090	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000676;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000676;transcript_name=NA12877_ch_T0000676;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000676:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072091	9072168	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000676;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000676;transcript_name=NA12877_ch_T0000676;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000676:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072169	9072296	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000676;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000676;transcript_name=NA12877_ch_T0000676;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000676:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072297	9072408	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000676;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000676;transcript_name=NA12877_ch_T0000676;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000676:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072409	9072516	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000676;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000676;transcript_name=NA12877_ch_T0000676;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000676:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072517	9072655	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000676;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000676;transcript_name=NA12877_ch_T0000676;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000676:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072656	9072761	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000676;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000676;transcript_name=NA12877_ch_T0000676;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000676:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072762	9072843	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000676;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000676;transcript_name=NA12877_ch_T0000676;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000676:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072844	9073537	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000676;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000676;transcript_name=NA12877_ch_T0000676;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000676:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9073538	9073755	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000676;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000676;transcript_name=NA12877_ch_T0000676;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000676:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9070986	9073750	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000677;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_G0000211;transcript_name=NA12877_ch_T0000677;gene_name=ENSG00000301844;ID=NA12877_ch_T0000677;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9070986	9071483	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000677;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000677;transcript_name=NA12877_ch_T0000677;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000677:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9071484	9072090	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000677;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000677;transcript_name=NA12877_ch_T0000677;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000677:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072091	9072168	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000677;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000677;transcript_name=NA12877_ch_T0000677;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000677:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072169	9072296	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000677;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000677;transcript_name=NA12877_ch_T0000677;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000677:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072297	9072408	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000677;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000677;transcript_name=NA12877_ch_T0000677;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000677:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072409	9072509	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000677;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000677;transcript_name=NA12877_ch_T0000677;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000677:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072510	9072843	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000677;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000677;transcript_name=NA12877_ch_T0000677;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000677:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072844	9073537	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000677;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000677;transcript_name=NA12877_ch_T0000677;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000677:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9073538	9073750	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000677;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000677;transcript_name=NA12877_ch_T0000677;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000677:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9070996	9073755	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000678;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_G0000211;transcript_name=NA12877_ch_T0000678;gene_name=ENSG00000301844;ID=NA12877_ch_T0000678;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9070996	9071483	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000678;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000678;transcript_name=NA12877_ch_T0000678;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000678:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9071484	9072090	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000678;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000678;transcript_name=NA12877_ch_T0000678;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000678:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072091	9072168	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000678;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000678;transcript_name=NA12877_ch_T0000678;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000678:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072169	9072296	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000678;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000678;transcript_name=NA12877_ch_T0000678;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000678:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072297	9072655	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000678;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000678;transcript_name=NA12877_ch_T0000678;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000678:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072656	9072761	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000678;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000678;transcript_name=NA12877_ch_T0000678;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000678:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072762	9072843	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000678;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000678;transcript_name=NA12877_ch_T0000678;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000678:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072844	9073537	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000678;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000678;transcript_name=NA12877_ch_T0000678;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000678:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9073538	9073755	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000678;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000678;transcript_name=NA12877_ch_T0000678;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000678:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9070998	9073748	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000679;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_G0000211;transcript_name=NA12877_ch_T0000679;gene_name=ENSG00000301844;ID=NA12877_ch_T0000679;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9070998	9071483	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000679;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000679;transcript_name=NA12877_ch_T0000679;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000679:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9071484	9072090	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000679;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000679;transcript_name=NA12877_ch_T0000679;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000679:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072091	9072168	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000679;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000679;transcript_name=NA12877_ch_T0000679;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000679:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072169	9072296	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000679;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000679;transcript_name=NA12877_ch_T0000679;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000679:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072297	9072843	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000679;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000679;transcript_name=NA12877_ch_T0000679;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000679:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072844	9073537	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000679;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000679;transcript_name=NA12877_ch_T0000679;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000679:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9073538	9073748	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000679;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000679;transcript_name=NA12877_ch_T0000679;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000679:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9070998	9073755	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000680;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_G0000211;transcript_name=NA12877_ch_T0000680;gene_name=ENSG00000301844;ID=NA12877_ch_T0000680;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9070998	9071483	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000680;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000680;transcript_name=NA12877_ch_T0000680;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000680:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9071484	9072090	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000680;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000680;transcript_name=NA12877_ch_T0000680;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000680:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072091	9072168	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000680;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000680;transcript_name=NA12877_ch_T0000680;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000680:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072169	9072296	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000680;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000680;transcript_name=NA12877_ch_T0000680;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000680:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072297	9072408	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000680;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000680;transcript_name=NA12877_ch_T0000680;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000680:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072409	9072509	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000680;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000680;transcript_name=NA12877_ch_T0000680;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000680:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072510	9072655	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000680;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000680;transcript_name=NA12877_ch_T0000680;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000680:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072656	9072750	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000680;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000680;transcript_name=NA12877_ch_T0000680;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000680:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072751	9072843	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000680;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000680;transcript_name=NA12877_ch_T0000680;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000680:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072844	9073537	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000680;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000680;transcript_name=NA12877_ch_T0000680;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000680:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9073538	9073755	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000680;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000680;transcript_name=NA12877_ch_T0000680;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000680:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9071018	9073755	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000682;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_G0000211;transcript_name=NA12877_ch_T0000682;gene_name=ENSG00000301844;ID=NA12877_ch_T0000682;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9071018	9071483	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000682;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000682;transcript_name=NA12877_ch_T0000682;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000682:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9071484	9072090	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000682;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000682;transcript_name=NA12877_ch_T0000682;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000682:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072091	9072168	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000682;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000682;transcript_name=NA12877_ch_T0000682;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000682:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072169	9072296	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000682;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000682;transcript_name=NA12877_ch_T0000682;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000682:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072297	9072655	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000682;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000682;transcript_name=NA12877_ch_T0000682;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000682:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072656	9072750	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000682;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000682;transcript_name=NA12877_ch_T0000682;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000682:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072751	9072843	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000682;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000682;transcript_name=NA12877_ch_T0000682;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000682:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072844	9073537	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000682;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000682;transcript_name=NA12877_ch_T0000682;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000682:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9073538	9073755	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000682;gene_id=NA12877_ch_G0000211;Parent=NA12877_ch_T0000682;transcript_name=NA12877_ch_T0000682;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000682:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9070998	9073748	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8_4;gene_id=NA12877_ch_G0000212;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=NA12877_ch_G0000212;Name=TSPY7P
NA12877_chrY	CAT	transcript	9070998	9073748	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000681;gene_id=NA12877_ch_G0000212;Parent=NA12877_ch_G0000212;transcript_name=NA12877_ch_T0000681;gene_name=TSPY7P;ID=NA12877_ch_T0000681;Name=TSPY7P
NA12877_chrY	CAT	exon	9070998	9071483	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000681;gene_id=NA12877_ch_G0000212;Parent=NA12877_ch_T0000681;transcript_name=NA12877_ch_T0000681;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000681:0;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9071484	9072090	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000681;gene_id=NA12877_ch_G0000212;Parent=NA12877_ch_T0000681;transcript_name=NA12877_ch_T0000681;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000681:0;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072091	9072168	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000681;gene_id=NA12877_ch_G0000212;Parent=NA12877_ch_T0000681;transcript_name=NA12877_ch_T0000681;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000681:1;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072169	9072296	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000681;gene_id=NA12877_ch_G0000212;Parent=NA12877_ch_T0000681;transcript_name=NA12877_ch_T0000681;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000681:1;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072297	9072408	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000681;gene_id=NA12877_ch_G0000212;Parent=NA12877_ch_T0000681;transcript_name=NA12877_ch_T0000681;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000681:2;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072409	9072509	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000681;gene_id=NA12877_ch_G0000212;Parent=NA12877_ch_T0000681;transcript_name=NA12877_ch_T0000681;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000681:2;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072510	9072655	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000681;gene_id=NA12877_ch_G0000212;Parent=NA12877_ch_T0000681;transcript_name=NA12877_ch_T0000681;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000681:3;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072656	9072761	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000681;gene_id=NA12877_ch_G0000212;Parent=NA12877_ch_T0000681;transcript_name=NA12877_ch_T0000681;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000681:3;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9072762	9072843	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000681;gene_id=NA12877_ch_G0000212;Parent=NA12877_ch_T0000681;transcript_name=NA12877_ch_T0000681;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000681:4;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9072844	9073537	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000681;gene_id=NA12877_ch_G0000212;Parent=NA12877_ch_T0000681;transcript_name=NA12877_ch_T0000681;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000681:4;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9073538	9073748	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000681;gene_id=NA12877_ch_G0000212;Parent=NA12877_ch_T0000681;transcript_name=NA12877_ch_T0000681;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000681:5;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9080960	9088660	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_1;gene_id=NA12877_ch_G0000213;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000213;Name=FAM197Y9
NA12877_chrY	CAT	transcript	9080960	9088660	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000683;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_G0000213;transcript_name=NA12877_ch_T0000683;gene_name=FAM197Y9;ID=NA12877_ch_T0000683;Name=FAM197Y9
NA12877_chrY	CAT	exon	9080960	9083087	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000683;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_T0000683;transcript_name=NA12877_ch_T0000683;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000683:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9083088	9086643	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000683;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_T0000683;transcript_name=NA12877_ch_T0000683;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000683:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9086644	9086729	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000683;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_T0000683;transcript_name=NA12877_ch_T0000683;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000683:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9086730	9088540	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000683;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_T0000683;transcript_name=NA12877_ch_T0000683;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000683:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9088541	9088660	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000683;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_T0000683;transcript_name=NA12877_ch_T0000683;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000683:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9083028	9088642	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000684;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_G0000213;transcript_name=NA12877_ch_T0000684;gene_name=FAM197Y9;ID=NA12877_ch_T0000684;Name=FAM197Y9
NA12877_chrY	CAT	exon	9083028	9083087	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000684;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_T0000684;transcript_name=NA12877_ch_T0000684;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000684:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9083088	9086643	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000684;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_T0000684;transcript_name=NA12877_ch_T0000684;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000684:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9086644	9086802	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000684;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_T0000684;transcript_name=NA12877_ch_T0000684;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000684:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9086803	9088308	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000684;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_T0000684;transcript_name=NA12877_ch_T0000684;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000684:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9088309	9088454	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000684;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_T0000684;transcript_name=NA12877_ch_T0000684;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000684:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9088455	9088540	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000684;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_T0000684;transcript_name=NA12877_ch_T0000684;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000684:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9088541	9088642	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000684;gene_id=NA12877_ch_G0000213;Parent=NA12877_ch_T0000684;transcript_name=NA12877_ch_T0000684;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000684:3;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9088309	9090302	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_2;gene_id=NA12877_ch_G0000214;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000214;Name=FAM197Y9
NA12877_chrY	CAT	transcript	9088309	9090302	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000685;gene_id=NA12877_ch_G0000214;Parent=NA12877_ch_G0000214;transcript_name=NA12877_ch_T0000685;gene_name=FAM197Y9;ID=NA12877_ch_T0000685;Name=FAM197Y9
NA12877_chrY	CAT	exon	9088309	9088454	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000685;gene_id=NA12877_ch_G0000214;Parent=NA12877_ch_T0000685;transcript_name=NA12877_ch_T0000685;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000685:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9088455	9088566	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000685;gene_id=NA12877_ch_G0000214;Parent=NA12877_ch_T0000685;transcript_name=NA12877_ch_T0000685;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000685:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9088567	9088650	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000685;gene_id=NA12877_ch_G0000214;Parent=NA12877_ch_T0000685;transcript_name=NA12877_ch_T0000685;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000685:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9088651	9089992	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000685;gene_id=NA12877_ch_G0000214;Parent=NA12877_ch_T0000685;transcript_name=NA12877_ch_T0000685;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000685:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9089993	9090302	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000685;gene_id=NA12877_ch_G0000214;Parent=NA12877_ch_T0000685;transcript_name=NA12877_ch_T0000685;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000685:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9091295	9094063	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_3;gene_id=NA12877_ch_G0000215;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=NA12877_ch_G0000215;Name=ENSG00000293749
NA12877_chrY	CAT	transcript	9091295	9094063	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_G0000215;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=NA12877_ch_T0000686;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9091295	9091387	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000686:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9091388	9091648	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000686:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9091649	9091786	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000686:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9091787	9092393	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000686:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092394	9092471	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000686:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092472	9092599	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000686:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092600	9092711	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000686:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092712	9092812	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000686:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092813	9092958	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000686:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092959	9093064	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000686:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093065	9093146	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000686:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9093147	9093840	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000686:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093841	9094063	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000686;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000686;transcript_name=NA12877_ch_T0000686;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000686:6;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9091307	9094051	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_G0000215;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=NA12877_ch_T0000688;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9091307	9091387	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000688:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9091388	9091648	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000688:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9091649	9091786	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000688:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9091787	9092393	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000688:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092394	9092471	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000688:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092472	9092599	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000688:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092600	9092711	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000688:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092712	9092819	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000688:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092820	9092958	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000688:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092959	9093064	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000688:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093065	9093146	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000688:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9093147	9093840	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000688:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093841	9094051	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000688;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000688;transcript_name=NA12877_ch_T0000688;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000688:6;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9091316	9094058	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_G0000215;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=NA12877_ch_T0000689;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9091316	9091387	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000689:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9091388	9091648	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000689:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9091649	9091786	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000689:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9091787	9092393	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000689:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092394	9092471	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000689:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092472	9092599	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000689:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092600	9092711	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000689:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092712	9092812	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000689:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092813	9092958	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000689:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092959	9093053	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000689:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093054	9093146	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000689:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9093147	9093840	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000689:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093841	9094058	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000689;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000689;transcript_name=NA12877_ch_T0000689;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000689:6;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9091518	9094056	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000690;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_G0000215;transcript_name=NA12877_ch_T0000690;gene_name=ENSG00000293749;ID=NA12877_ch_T0000690;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9091518	9091786	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000690;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000690;transcript_name=NA12877_ch_T0000690;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000690:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9091787	9092393	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000690;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000690;transcript_name=NA12877_ch_T0000690;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000690:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092394	9092471	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000690;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000690;transcript_name=NA12877_ch_T0000690;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000690:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092472	9092599	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000690;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000690;transcript_name=NA12877_ch_T0000690;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000690:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092600	9092711	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000690;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000690;transcript_name=NA12877_ch_T0000690;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000690:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092712	9092812	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000690;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000690;transcript_name=NA12877_ch_T0000690;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000690:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092813	9092958	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000690;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000690;transcript_name=NA12877_ch_T0000690;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000690:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092959	9093064	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000690;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000690;transcript_name=NA12877_ch_T0000690;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000690:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093065	9093146	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000690;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000690;transcript_name=NA12877_ch_T0000690;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000690:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9093147	9093840	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000690;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000690;transcript_name=NA12877_ch_T0000690;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000690:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093841	9094056	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000690;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000690;transcript_name=NA12877_ch_T0000690;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000690:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9091614	9094051	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000691;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_G0000215;transcript_name=NA12877_ch_T0000691;gene_name=ENSG00000293749;ID=NA12877_ch_T0000691;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9091614	9091786	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000691;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000691;transcript_name=NA12877_ch_T0000691;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000691:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9091787	9092393	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000691;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000691;transcript_name=NA12877_ch_T0000691;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000691:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092394	9092471	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000691;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000691;transcript_name=NA12877_ch_T0000691;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000691:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092472	9092599	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000691;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000691;transcript_name=NA12877_ch_T0000691;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000691:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092600	9092711	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000691;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000691;transcript_name=NA12877_ch_T0000691;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000691:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092712	9092819	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000691;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000691;transcript_name=NA12877_ch_T0000691;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000691:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092820	9092958	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000691;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000691;transcript_name=NA12877_ch_T0000691;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000691:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092959	9093064	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000691;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000691;transcript_name=NA12877_ch_T0000691;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000691:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093065	9093146	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000691;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000691;transcript_name=NA12877_ch_T0000691;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000691:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9093147	9093840	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000691;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000691;transcript_name=NA12877_ch_T0000691;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000691:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093841	9094051	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000691;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000691;transcript_name=NA12877_ch_T0000691;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000691:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9091740	9094062	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000692;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_G0000215;transcript_name=NA12877_ch_T0000692;gene_name=ENSG00000293749;ID=NA12877_ch_T0000692;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9091740	9091842	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000692;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000692;transcript_name=NA12877_ch_T0000692;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000692:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9091843	9092411	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000692;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000692;transcript_name=NA12877_ch_T0000692;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000692:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092412	9092471	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000692;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000692;transcript_name=NA12877_ch_T0000692;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000692:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092472	9092599	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000692;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000692;transcript_name=NA12877_ch_T0000692;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000692:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092600	9092711	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000692;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000692;transcript_name=NA12877_ch_T0000692;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000692:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092712	9092812	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000692;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000692;transcript_name=NA12877_ch_T0000692;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000692:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092813	9092958	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000692;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000692;transcript_name=NA12877_ch_T0000692;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000692:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092959	9093064	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000692;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000692;transcript_name=NA12877_ch_T0000692;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000692:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093065	9093146	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000692;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000692;transcript_name=NA12877_ch_T0000692;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000692:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9093147	9093840	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000692;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000692;transcript_name=NA12877_ch_T0000692;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000692:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093841	9094062	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000692;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000692;transcript_name=NA12877_ch_T0000692;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000692:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9092441	9094049	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000693;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_G0000215;transcript_name=NA12877_ch_T0000693;gene_name=ENSG00000293749;ID=NA12877_ch_T0000693;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9092441	9092471	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000693;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000693;transcript_name=NA12877_ch_T0000693;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000693:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092472	9092599	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000693;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000693;transcript_name=NA12877_ch_T0000693;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000693:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092600	9092958	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000693;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000693;transcript_name=NA12877_ch_T0000693;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000693:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092959	9093064	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000693;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000693;transcript_name=NA12877_ch_T0000693;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000693:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093065	9093146	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000693;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000693;transcript_name=NA12877_ch_T0000693;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000693:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9093147	9093840	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000693;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000693;transcript_name=NA12877_ch_T0000693;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000693:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093841	9094049	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000693;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000693;transcript_name=NA12877_ch_T0000693;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000693:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9092986	9094058	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000694;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_G0000215;transcript_name=NA12877_ch_T0000694;gene_name=ENSG00000293749;ID=NA12877_ch_T0000694;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9092986	9093146	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000694;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000694;transcript_name=NA12877_ch_T0000694;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000694:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9093147	9093840	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000694;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000694;transcript_name=NA12877_ch_T0000694;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000694:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093841	9094058	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000694;gene_id=NA12877_ch_G0000215;Parent=NA12877_ch_T0000694;transcript_name=NA12877_ch_T0000694;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000694:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9091301	9093863	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_3;gene_id=NA12877_ch_G0000216;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=NA12877_ch_G0000216;Name=TSPY6P
NA12877_chrY	CAT	transcript	9091301	9093863	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_G0000216;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=NA12877_ch_T0000687;Name=TSPY6P
NA12877_chrY	CAT	exon	9091301	9091511	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000687:0;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9091512	9091519	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000687:0;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9091520	9091786	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000687:1;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9091787	9092393	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000687:1;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092394	9092471	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000687:2;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092472	9092599	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000687:2;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092600	9092711	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000687:3;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092712	9092812	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000687:3;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9092813	9092958	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000687:4;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9092959	9093064	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000687:4;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093065	9093146	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000687:5;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9093147	9093840	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000687:5;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9093841	9093863	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000687;gene_id=NA12877_ch_G0000216;Parent=NA12877_ch_T0000687;transcript_name=NA12877_ch_T0000687;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000687:6;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9103192	9108942	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_2;gene_id=NA12877_ch_G0000217;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000217;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9103192	9108942	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000695;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_G0000217;transcript_name=NA12877_ch_T0000695;gene_name=FAM197Y5;ID=NA12877_ch_T0000695;Name=FAM197Y5
NA12877_chrY	CAT	exon	9103192	9103381	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000695;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_T0000695;transcript_name=NA12877_ch_T0000695;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000695:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9103382	9106931	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000695;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_T0000695;transcript_name=NA12877_ch_T0000695;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000695:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9106932	9107017	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000695;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_T0000695;transcript_name=NA12877_ch_T0000695;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000695:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9107018	9108828	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000695;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_T0000695;transcript_name=NA12877_ch_T0000695;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000695:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9108829	9108942	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000695;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_T0000695;transcript_name=NA12877_ch_T0000695;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000695:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9103322	9108930	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000696;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_G0000217;transcript_name=NA12877_ch_T0000696;gene_name=FAM197Y5;ID=NA12877_ch_T0000696;Name=FAM197Y5
NA12877_chrY	CAT	exon	9103322	9103381	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000696;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_T0000696;transcript_name=NA12877_ch_T0000696;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000696:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9103382	9106931	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000696;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_T0000696;transcript_name=NA12877_ch_T0000696;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000696:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9106932	9107090	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000696;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_T0000696;transcript_name=NA12877_ch_T0000696;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000696:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9107091	9108596	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000696;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_T0000696;transcript_name=NA12877_ch_T0000696;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000696:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9108597	9108742	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000696;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_T0000696;transcript_name=NA12877_ch_T0000696;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000696:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9108743	9108828	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000696;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_T0000696;transcript_name=NA12877_ch_T0000696;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000696:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9108829	9108930	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000696;gene_id=NA12877_ch_G0000217;Parent=NA12877_ch_T0000696;transcript_name=NA12877_ch_T0000696;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000696:3;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9108597	9110589	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_2;gene_id=NA12877_ch_G0000218;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000218;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9108597	9110589	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000697;gene_id=NA12877_ch_G0000218;Parent=NA12877_ch_G0000218;transcript_name=NA12877_ch_T0000697;gene_name=FAM197Y5;ID=NA12877_ch_T0000697;Name=FAM197Y5
NA12877_chrY	CAT	exon	9108597	9108742	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000697;gene_id=NA12877_ch_G0000218;Parent=NA12877_ch_T0000697;transcript_name=NA12877_ch_T0000697;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000697:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9108743	9110278	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000697;gene_id=NA12877_ch_G0000218;Parent=NA12877_ch_T0000697;transcript_name=NA12877_ch_T0000697;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000697:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9110279	9110589	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000697;gene_id=NA12877_ch_G0000218;Parent=NA12877_ch_T0000697;transcript_name=NA12877_ch_T0000697;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000697:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9111543	9114357	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;alternative_source_transcripts=ENST00000451548.6;gene_id=NA12877_ch_G0000219;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=NA12877_ch_G0000219;Name=TSPY9
NA12877_chrY	CAT	transcript	9111543	9114357	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_G0000219;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=NA12877_ch_T0000698;Name=TSPY9
NA12877_chrY	CAT	exon	9111543	9112092	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=exon:NA12877_ch_T0000698:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9111589	9112092	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000698:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9111589	9111591	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=start_codon:NA12877_ch_T0000698;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9112093	9112699	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=intron:NA12877_ch_T0000698:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9112700	9112777	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=exon:NA12877_ch_T0000698:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9112700	9112777	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000698:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9112778	9112905	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=intron:NA12877_ch_T0000698:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9112906	9113017	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=exon:NA12877_ch_T0000698:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9112906	9113017	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000698:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9113018	9113118	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=intron:NA12877_ch_T0000698:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9113119	9113264	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=exon:NA12877_ch_T0000698:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9113119	9113264	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000698:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9113265	9113370	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=intron:NA12877_ch_T0000698:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9113371	9113452	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=exon:NA12877_ch_T0000698:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9113371	9113452	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000698:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9113453	9114146	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=intron:NA12877_ch_T0000698:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9114147	9114357	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=exon:NA12877_ch_T0000698:5;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9114147	9114169	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000698:5;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9114167	9114169	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000451548.6;transcript_id=NA12877_ch_T0000698;gene_id=NA12877_ch_G0000219;Parent=NA12877_ch_T0000698;transcript_name=NA12877_ch_T0000698;gene_name=TSPY9;ID=stop_codon:NA12877_ch_T0000698;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9123512	9129260	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_5;gene_id=NA12877_ch_G0000220;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000220;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9123512	9129260	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000699;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_G0000220;transcript_name=NA12877_ch_T0000699;gene_name=FAM197Y5;ID=NA12877_ch_T0000699;Name=FAM197Y5
NA12877_chrY	CAT	exon	9123512	9123701	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000699;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_T0000699;transcript_name=NA12877_ch_T0000699;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000699:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9123702	9127255	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000699;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_T0000699;transcript_name=NA12877_ch_T0000699;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000699:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9127256	9127341	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000699;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_T0000699;transcript_name=NA12877_ch_T0000699;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000699:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9127342	9129146	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000699;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_T0000699;transcript_name=NA12877_ch_T0000699;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000699:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9129147	9129260	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000699;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_T0000699;transcript_name=NA12877_ch_T0000699;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000699:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9123642	9129248	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000700;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_G0000220;transcript_name=NA12877_ch_T0000700;gene_name=FAM197Y5;ID=NA12877_ch_T0000700;Name=FAM197Y5
NA12877_chrY	CAT	exon	9123642	9123701	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000700;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_T0000700;transcript_name=NA12877_ch_T0000700;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000700:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9123702	9127255	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000700;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_T0000700;transcript_name=NA12877_ch_T0000700;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000700:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9127256	9127414	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000700;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_T0000700;transcript_name=NA12877_ch_T0000700;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000700:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9127415	9128914	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000700;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_T0000700;transcript_name=NA12877_ch_T0000700;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000700:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9128915	9129060	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000700;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_T0000700;transcript_name=NA12877_ch_T0000700;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000700:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9129061	9129146	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000700;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_T0000700;transcript_name=NA12877_ch_T0000700;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000700:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9129147	9129248	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000700;gene_id=NA12877_ch_G0000220;Parent=NA12877_ch_T0000700;transcript_name=NA12877_ch_T0000700;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000700:3;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9128915	9130907	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_6;gene_id=NA12877_ch_G0000221;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000221;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9128915	9130907	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000701;gene_id=NA12877_ch_G0000221;Parent=NA12877_ch_G0000221;transcript_name=NA12877_ch_T0000701;gene_name=FAM197Y5;ID=NA12877_ch_T0000701;Name=FAM197Y5
NA12877_chrY	CAT	exon	9128915	9129060	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000701;gene_id=NA12877_ch_G0000221;Parent=NA12877_ch_T0000701;transcript_name=NA12877_ch_T0000701;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000701:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9129061	9130596	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000701;gene_id=NA12877_ch_G0000221;Parent=NA12877_ch_T0000701;transcript_name=NA12877_ch_T0000701;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000701:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9130597	9130907	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000701;gene_id=NA12877_ch_G0000221;Parent=NA12877_ch_T0000701;transcript_name=NA12877_ch_T0000701;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000701:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9131861	9134675	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;alternative_source_transcripts=ENST00000440215.5;gene_id=NA12877_ch_G0000222;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=NA12877_ch_G0000222;Name=TSPY9
NA12877_chrY	CAT	transcript	9131861	9134675	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_G0000222;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=NA12877_ch_T0000702;Name=TSPY9
NA12877_chrY	CAT	exon	9131861	9132410	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=exon:NA12877_ch_T0000702:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9131907	9132410	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000702:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9131907	9131909	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=start_codon:NA12877_ch_T0000702;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9132411	9133017	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=intron:NA12877_ch_T0000702:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9133018	9133095	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=exon:NA12877_ch_T0000702:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9133018	9133095	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000702:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9133096	9133223	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=intron:NA12877_ch_T0000702:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9133224	9133335	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=exon:NA12877_ch_T0000702:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9133224	9133335	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000702:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9133336	9133436	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=intron:NA12877_ch_T0000702:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9133437	9133582	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=exon:NA12877_ch_T0000702:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9133437	9133582	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000702:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9133583	9133688	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=intron:NA12877_ch_T0000702:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9133689	9133770	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=exon:NA12877_ch_T0000702:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9133689	9133770	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000702:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9133771	9134464	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=intron:NA12877_ch_T0000702:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9134465	9134675	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=exon:NA12877_ch_T0000702:5;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9134465	9134487	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000702:5;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9134485	9134487	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000440215.5;transcript_id=NA12877_ch_T0000702;gene_id=NA12877_ch_G0000222;Parent=NA12877_ch_T0000702;transcript_name=NA12877_ch_T0000702;gene_name=TSPY9;ID=stop_codon:NA12877_ch_T0000702;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9141880	9149775	.	-	.	source_gene_common_name=ENSG00000290332;source_gene=ENSG00000290332.1_1;gene_id=NA12877_ch_G0000223;gene_biotype=lncRNA;gene_name=ENSG00000290332;gene_sources=liftoff;ID=NA12877_ch_G0000223;Name=ENSG00000290332
NA12877_chrY	CAT	transcript	9141880	9149775	1000	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000703;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_G0000223;transcript_name=NA12877_ch_T0000703;gene_name=ENSG00000290332;ID=NA12877_ch_T0000703;Name=ENSG00000290332
NA12877_chrY	CAT	exon	9141880	9144006	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000703;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000703;transcript_name=NA12877_ch_T0000703;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000703:0;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9144007	9147557	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000703;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000703;transcript_name=NA12877_ch_T0000703;gene_name=ENSG00000290332;ID=intron:NA12877_ch_T0000703:0;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9147558	9147643	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000703;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000703;transcript_name=NA12877_ch_T0000703;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000703:1;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9147644	9149454	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000703;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000703;transcript_name=NA12877_ch_T0000703;gene_name=ENSG00000290332;ID=intron:NA12877_ch_T0000703:1;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9149455	9149564	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000703;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000703;transcript_name=NA12877_ch_T0000703;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000703:2;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9149565	9149760	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000703;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000703;transcript_name=NA12877_ch_T0000703;gene_name=ENSG00000290332;ID=intron:NA12877_ch_T0000703:2;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9149761	9149775	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000703;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000703;transcript_name=NA12877_ch_T0000703;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000703:3;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9143947	9149556	1000	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000704;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_G0000223;transcript_name=NA12877_ch_T0000704;gene_name=ENSG00000290332;ID=NA12877_ch_T0000704;Name=ENSG00000290332
NA12877_chrY	CAT	exon	9143947	9144006	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000704;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000704;transcript_name=NA12877_ch_T0000704;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000704:0;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9144007	9147557	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000704;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000704;transcript_name=NA12877_ch_T0000704;gene_name=ENSG00000290332;ID=intron:NA12877_ch_T0000704:0;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9147558	9147716	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000704;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000704;transcript_name=NA12877_ch_T0000704;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000704:1;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9147717	9149222	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000704;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000704;transcript_name=NA12877_ch_T0000704;gene_name=ENSG00000290332;ID=intron:NA12877_ch_T0000704:1;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9149223	9149368	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000704;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000704;transcript_name=NA12877_ch_T0000704;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000704:2;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9149369	9149454	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000704;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000704;transcript_name=NA12877_ch_T0000704;gene_name=ENSG00000290332;ID=intron:NA12877_ch_T0000704:2;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9149455	9149556	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000704;gene_id=NA12877_ch_G0000223;Parent=NA12877_ch_T0000704;transcript_name=NA12877_ch_T0000704;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000704:3;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9149223	9151213	.	-	.	source_gene_common_name=FAM197Y2;source_gene=ENSG00000234803.9_1;gene_id=NA12877_ch_G0000224;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA12877_ch_G0000224;Name=FAM197Y2
NA12877_chrY	CAT	transcript	9149223	9151213	1000	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA12877_ch_T0000705;gene_id=NA12877_ch_G0000224;Parent=NA12877_ch_G0000224;transcript_name=NA12877_ch_T0000705;gene_name=FAM197Y2;ID=NA12877_ch_T0000705;Name=FAM197Y2
NA12877_chrY	CAT	exon	9149223	9149368	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA12877_ch_T0000705;gene_id=NA12877_ch_G0000224;Parent=NA12877_ch_T0000705;transcript_name=NA12877_ch_T0000705;gene_name=FAM197Y2;ID=exon:NA12877_ch_T0000705:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9149369	9150904	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA12877_ch_T0000705;gene_id=NA12877_ch_G0000224;Parent=NA12877_ch_T0000705;transcript_name=NA12877_ch_T0000705;gene_name=FAM197Y2;ID=intron:NA12877_ch_T0000705:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9150905	9151213	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA12877_ch_T0000705;gene_id=NA12877_ch_G0000224;Parent=NA12877_ch_T0000705;transcript_name=NA12877_ch_T0000705;gene_name=FAM197Y2;ID=exon:NA12877_ch_T0000705:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9152207	9154975	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_2;gene_id=NA12877_ch_G0000225;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=NA12877_ch_G0000225;Name=ENSG00000293749
NA12877_chrY	CAT	transcript	9152207	9154975	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_G0000225;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=NA12877_ch_T0000706;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9152207	9152299	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000706:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9152300	9152560	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000706:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9152561	9152698	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000706:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9152699	9153305	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000706:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153306	9153383	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000706:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153384	9153511	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000706:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153512	9153623	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000706:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153624	9153724	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000706:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153725	9153870	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000706:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153871	9153976	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000706:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153977	9154058	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000706:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9154059	9154752	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000706:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9154753	9154975	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000706;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000706;transcript_name=NA12877_ch_T0000706;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000706:6;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9152219	9154963	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_G0000225;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=NA12877_ch_T0000708;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9152219	9152299	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000708:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9152300	9152560	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000708:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9152561	9152698	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000708:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9152699	9153305	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000708:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153306	9153383	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000708:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153384	9153511	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000708:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153512	9153623	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000708:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153624	9153731	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000708:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153732	9153870	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000708:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153871	9153976	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000708:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153977	9154058	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000708:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9154059	9154752	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000708:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9154753	9154963	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000708;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000708;transcript_name=NA12877_ch_T0000708;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000708:6;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9152228	9154970	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_G0000225;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=NA12877_ch_T0000709;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9152228	9152299	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000709:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9152300	9152560	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000709:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9152561	9152698	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000709:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9152699	9153305	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000709:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153306	9153383	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000709:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153384	9153511	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000709:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153512	9153623	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000709:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153624	9153724	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000709:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153725	9153870	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000709:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153871	9153965	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000709:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153966	9154058	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000709:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9154059	9154752	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000709:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9154753	9154970	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000709;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000709;transcript_name=NA12877_ch_T0000709;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000709:6;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9152430	9154968	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000710;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_G0000225;transcript_name=NA12877_ch_T0000710;gene_name=ENSG00000293749;ID=NA12877_ch_T0000710;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9152430	9152698	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000710;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000710;transcript_name=NA12877_ch_T0000710;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000710:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9152699	9153305	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000710;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000710;transcript_name=NA12877_ch_T0000710;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000710:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153306	9153383	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000710;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000710;transcript_name=NA12877_ch_T0000710;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000710:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153384	9153511	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000710;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000710;transcript_name=NA12877_ch_T0000710;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000710:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153512	9153623	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000710;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000710;transcript_name=NA12877_ch_T0000710;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000710:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153624	9153724	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000710;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000710;transcript_name=NA12877_ch_T0000710;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000710:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153725	9153870	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000710;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000710;transcript_name=NA12877_ch_T0000710;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000710:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153871	9153976	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000710;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000710;transcript_name=NA12877_ch_T0000710;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000710:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153977	9154058	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000710;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000710;transcript_name=NA12877_ch_T0000710;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000710:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9154059	9154752	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000710;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000710;transcript_name=NA12877_ch_T0000710;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000710:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9154753	9154968	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000710;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000710;transcript_name=NA12877_ch_T0000710;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000710:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9152526	9154963	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000711;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_G0000225;transcript_name=NA12877_ch_T0000711;gene_name=ENSG00000293749;ID=NA12877_ch_T0000711;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9152526	9152698	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000711;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000711;transcript_name=NA12877_ch_T0000711;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000711:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9152699	9153305	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000711;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000711;transcript_name=NA12877_ch_T0000711;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000711:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153306	9153383	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000711;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000711;transcript_name=NA12877_ch_T0000711;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000711:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153384	9153511	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000711;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000711;transcript_name=NA12877_ch_T0000711;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000711:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153512	9153623	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000711;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000711;transcript_name=NA12877_ch_T0000711;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000711:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153624	9153731	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000711;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000711;transcript_name=NA12877_ch_T0000711;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000711:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153732	9153870	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000711;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000711;transcript_name=NA12877_ch_T0000711;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000711:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153871	9153976	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000711;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000711;transcript_name=NA12877_ch_T0000711;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000711:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153977	9154058	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000711;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000711;transcript_name=NA12877_ch_T0000711;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000711:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9154059	9154752	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000711;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000711;transcript_name=NA12877_ch_T0000711;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000711:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9154753	9154963	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000711;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000711;transcript_name=NA12877_ch_T0000711;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000711:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9152652	9154974	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000712;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_G0000225;transcript_name=NA12877_ch_T0000712;gene_name=ENSG00000293749;ID=NA12877_ch_T0000712;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9152652	9152754	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000712;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000712;transcript_name=NA12877_ch_T0000712;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000712:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9152755	9153323	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000712;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000712;transcript_name=NA12877_ch_T0000712;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000712:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153324	9153383	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000712;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000712;transcript_name=NA12877_ch_T0000712;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000712:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153384	9153511	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000712;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000712;transcript_name=NA12877_ch_T0000712;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000712:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153512	9153623	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000712;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000712;transcript_name=NA12877_ch_T0000712;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000712:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153624	9153724	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000712;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000712;transcript_name=NA12877_ch_T0000712;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000712:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153725	9153870	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000712;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000712;transcript_name=NA12877_ch_T0000712;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000712:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153871	9153976	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000712;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000712;transcript_name=NA12877_ch_T0000712;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000712:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153977	9154058	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000712;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000712;transcript_name=NA12877_ch_T0000712;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000712:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9154059	9154752	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000712;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000712;transcript_name=NA12877_ch_T0000712;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000712:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9154753	9154974	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000712;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000712;transcript_name=NA12877_ch_T0000712;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000712:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9153353	9154961	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000713;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_G0000225;transcript_name=NA12877_ch_T0000713;gene_name=ENSG00000293749;ID=NA12877_ch_T0000713;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9153353	9153383	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000713;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000713;transcript_name=NA12877_ch_T0000713;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000713:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153384	9153511	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000713;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000713;transcript_name=NA12877_ch_T0000713;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000713:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153512	9153870	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000713;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000713;transcript_name=NA12877_ch_T0000713;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000713:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153871	9153976	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000713;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000713;transcript_name=NA12877_ch_T0000713;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000713:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153977	9154058	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000713;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000713;transcript_name=NA12877_ch_T0000713;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000713:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9154059	9154752	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000713;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000713;transcript_name=NA12877_ch_T0000713;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000713:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9154753	9154961	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000713;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000713;transcript_name=NA12877_ch_T0000713;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000713:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9153898	9154970	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000714;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_G0000225;transcript_name=NA12877_ch_T0000714;gene_name=ENSG00000293749;ID=NA12877_ch_T0000714;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9153898	9154058	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000714;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000714;transcript_name=NA12877_ch_T0000714;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000714:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9154059	9154752	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000714;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000714;transcript_name=NA12877_ch_T0000714;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000714:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9154753	9154970	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000714;gene_id=NA12877_ch_G0000225;Parent=NA12877_ch_T0000714;transcript_name=NA12877_ch_T0000714;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000714:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9152213	9154775	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_1;gene_id=NA12877_ch_G0000226;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=NA12877_ch_G0000226;Name=TSPY6P
NA12877_chrY	CAT	transcript	9152213	9154775	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_G0000226;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=NA12877_ch_T0000707;Name=TSPY6P
NA12877_chrY	CAT	exon	9152213	9152423	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000707:0;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9152424	9152431	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000707:0;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9152432	9152698	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000707:1;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9152699	9153305	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000707:1;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153306	9153383	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000707:2;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153384	9153511	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000707:2;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153512	9153623	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000707:3;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153624	9153724	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000707:3;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153725	9153870	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000707:4;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9153871	9153976	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000707:4;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9153977	9154058	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000707:5;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9154059	9154752	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000707:5;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9154753	9154775	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000707;gene_id=NA12877_ch_G0000226;Parent=NA12877_ch_T0000707;transcript_name=NA12877_ch_T0000707;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000707:6;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9164232	9169833	.	-	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000290373.1;gene_id=NA12877_ch_G0000227;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=NA12877_ch_G0000227;Name=FAM197Y4
NA12877_chrY	CAT	transcript	9164232	9169833	1000	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA12877_ch_T0000715;gene_id=NA12877_ch_G0000227;Parent=NA12877_ch_G0000227;transcript_name=NA12877_ch_T0000715;gene_name=FAM197Y4;ID=NA12877_ch_T0000715;Name=FAM197Y4
NA12877_chrY	CAT	exon	9164232	9164291	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA12877_ch_T0000715;gene_id=NA12877_ch_G0000227;Parent=NA12877_ch_T0000715;transcript_name=NA12877_ch_T0000715;gene_name=FAM197Y4;ID=exon:NA12877_ch_T0000715:0;Name=FAM197Y4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9164292	9167842	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA12877_ch_T0000715;gene_id=NA12877_ch_G0000227;Parent=NA12877_ch_T0000715;transcript_name=NA12877_ch_T0000715;gene_name=FAM197Y4;ID=intron:NA12877_ch_T0000715:0;Name=FAM197Y4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9167843	9168001	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA12877_ch_T0000715;gene_id=NA12877_ch_G0000227;Parent=NA12877_ch_T0000715;transcript_name=NA12877_ch_T0000715;gene_name=FAM197Y4;ID=exon:NA12877_ch_T0000715:1;Name=FAM197Y4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9168002	9169499	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA12877_ch_T0000715;gene_id=NA12877_ch_G0000227;Parent=NA12877_ch_T0000715;transcript_name=NA12877_ch_T0000715;gene_name=FAM197Y4;ID=intron:NA12877_ch_T0000715:1;Name=FAM197Y4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9169500	9169645	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA12877_ch_T0000715;gene_id=NA12877_ch_G0000227;Parent=NA12877_ch_T0000715;transcript_name=NA12877_ch_T0000715;gene_name=FAM197Y4;ID=exon:NA12877_ch_T0000715:2;Name=FAM197Y4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9169646	9169731	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA12877_ch_T0000715;gene_id=NA12877_ch_G0000227;Parent=NA12877_ch_T0000715;transcript_name=NA12877_ch_T0000715;gene_name=FAM197Y4;ID=intron:NA12877_ch_T0000715:2;Name=FAM197Y4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9169732	9169833	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA12877_ch_T0000715;gene_id=NA12877_ch_G0000227;Parent=NA12877_ch_T0000715;transcript_name=NA12877_ch_T0000715;gene_name=FAM197Y4;ID=exon:NA12877_ch_T0000715:3;Name=FAM197Y4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9169500	9171492	.	-	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000274196.6;gene_id=NA12877_ch_G0000228;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y4;gene_sources=liftoff;ID=NA12877_ch_G0000228;Name=FAM197Y4
NA12877_chrY	CAT	transcript	9169500	9171492	1000	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA12877_ch_T0000716;gene_id=NA12877_ch_G0000228;Parent=NA12877_ch_G0000228;transcript_name=NA12877_ch_T0000716;gene_name=FAM197Y4;ID=NA12877_ch_T0000716;Name=FAM197Y4
NA12877_chrY	CAT	exon	9169500	9169645	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA12877_ch_T0000716;gene_id=NA12877_ch_G0000228;Parent=NA12877_ch_T0000716;transcript_name=NA12877_ch_T0000716;gene_name=FAM197Y4;ID=exon:NA12877_ch_T0000716:0;Name=FAM197Y4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9169646	9171181	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA12877_ch_T0000716;gene_id=NA12877_ch_G0000228;Parent=NA12877_ch_T0000716;transcript_name=NA12877_ch_T0000716;gene_name=FAM197Y4;ID=intron:NA12877_ch_T0000716:0;Name=FAM197Y4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9171182	9171492	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA12877_ch_T0000716;gene_id=NA12877_ch_G0000228;Parent=NA12877_ch_T0000716;transcript_name=NA12877_ch_T0000716;gene_name=FAM197Y4;ID=exon:NA12877_ch_T0000716:1;Name=FAM197Y4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9172446	9175243	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;alternative_source_transcripts=ENST00000428845.6;gene_id=NA12877_ch_G0000229;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=NA12877_ch_G0000229;Name=TSPY3
NA12877_chrY	CAT	transcript	9172446	9175243	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_G0000229;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=NA12877_ch_T0000717;Name=TSPY3
NA12877_chrY	CAT	exon	9172446	9172977	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=exon:NA12877_ch_T0000717:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9172492	9172977	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000717:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9172492	9172494	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=start_codon:NA12877_ch_T0000717;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9172978	9173584	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=intron:NA12877_ch_T0000717:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9173585	9173662	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=exon:NA12877_ch_T0000717:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9173585	9173662	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000717:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9173663	9173790	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=intron:NA12877_ch_T0000717:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9173791	9173902	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=exon:NA12877_ch_T0000717:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9173791	9173902	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000717:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9173903	9174003	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=intron:NA12877_ch_T0000717:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9174004	9174149	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=exon:NA12877_ch_T0000717:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9174004	9174149	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000717:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9174150	9174255	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=intron:NA12877_ch_T0000717:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9174256	9174337	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=exon:NA12877_ch_T0000717:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9174256	9174337	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000717:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9174338	9175031	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=intron:NA12877_ch_T0000717:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9175032	9175243	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=exon:NA12877_ch_T0000717:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9175032	9175054	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000717:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9175052	9175054	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000717;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000717;transcript_name=NA12877_ch_T0000717;gene_name=TSPY3;ID=stop_codon:NA12877_ch_T0000717;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9172492	9175242	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_G0000229;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=NA12877_ch_T0000718;Name=TSPY3
NA12877_chrY	CAT	exon	9172492	9172977	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=exon:NA12877_ch_T0000718:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9172492	9172977	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000718:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9172492	9172494	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=start_codon:NA12877_ch_T0000718;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9172978	9173584	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=intron:NA12877_ch_T0000718:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9173585	9173662	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=exon:NA12877_ch_T0000718:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9173585	9173662	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000718:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9173663	9173790	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=intron:NA12877_ch_T0000718:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9173791	9173902	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=exon:NA12877_ch_T0000718:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9173791	9173902	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000718:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9173903	9174003	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=intron:NA12877_ch_T0000718:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9174004	9174149	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=exon:NA12877_ch_T0000718:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9174004	9174149	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000718:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9174150	9174244	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=intron:NA12877_ch_T0000718:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9174245	9174337	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=exon:NA12877_ch_T0000718:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9174245	9174307	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000718:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9174305	9174307	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=stop_codon:NA12877_ch_T0000718;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9174338	9175031	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=intron:NA12877_ch_T0000718:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9175032	9175242	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=NA12877_ch_T0000718;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000718;transcript_name=NA12877_ch_T0000718;gene_name=TSPY3;ID=exon:NA12877_ch_T0000718:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9172492	9175054	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_G0000229;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=NA12877_ch_T0000719;Name=TSPY3
NA12877_chrY	CAT	exon	9172492	9172578	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=exon:NA12877_ch_T0000719:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9172492	9172578	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000719:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9172492	9172494	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=start_codon:NA12877_ch_T0000719;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9172579	9172839	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=intron:NA12877_ch_T0000719:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9172840	9172977	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=exon:NA12877_ch_T0000719:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9172840	9172977	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000719:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9172978	9173584	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=intron:NA12877_ch_T0000719:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9173585	9173662	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=exon:NA12877_ch_T0000719:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9173585	9173662	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000719:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9173663	9173790	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=intron:NA12877_ch_T0000719:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9173791	9173902	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=exon:NA12877_ch_T0000719:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9173791	9173902	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000719:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9173903	9174003	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=intron:NA12877_ch_T0000719:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9174004	9174149	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=exon:NA12877_ch_T0000719:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9174004	9174149	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000719:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9174150	9174255	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=intron:NA12877_ch_T0000719:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9174256	9174337	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=exon:NA12877_ch_T0000719:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9174256	9174337	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000719:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9174338	9175031	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=intron:NA12877_ch_T0000719:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9175032	9175054	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=exon:NA12877_ch_T0000719:6;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9175032	9175054	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000719:6;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9175052	9175054	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000719;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000719;transcript_name=NA12877_ch_T0000719;gene_name=TSPY3;ID=stop_codon:NA12877_ch_T0000719;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9172492	9175249	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=NA12877_ch_T0000720;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_G0000229;transcript_name=NA12877_ch_T0000720;gene_name=TSPY3;ID=NA12877_ch_T0000720;Name=TSPY3
NA12877_chrY	CAT	exon	9172492	9172977	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=NA12877_ch_T0000720;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000720;transcript_name=NA12877_ch_T0000720;gene_name=TSPY3;ID=exon:NA12877_ch_T0000720:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9172978	9173584	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=NA12877_ch_T0000720;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000720;transcript_name=NA12877_ch_T0000720;gene_name=TSPY3;ID=intron:NA12877_ch_T0000720:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9173585	9173662	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=NA12877_ch_T0000720;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000720;transcript_name=NA12877_ch_T0000720;gene_name=TSPY3;ID=exon:NA12877_ch_T0000720:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9173663	9173790	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=NA12877_ch_T0000720;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000720;transcript_name=NA12877_ch_T0000720;gene_name=TSPY3;ID=intron:NA12877_ch_T0000720:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9173791	9174337	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=NA12877_ch_T0000720;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000720;transcript_name=NA12877_ch_T0000720;gene_name=TSPY3;ID=exon:NA12877_ch_T0000720:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9174338	9174464	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=NA12877_ch_T0000720;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000720;transcript_name=NA12877_ch_T0000720;gene_name=TSPY3;ID=intron:NA12877_ch_T0000720:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9174465	9175249	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=NA12877_ch_T0000720;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000720;transcript_name=NA12877_ch_T0000720;gene_name=TSPY3;ID=exon:NA12877_ch_T0000720:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9173852	9175234	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000721;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_G0000229;transcript_name=NA12877_ch_T0000721;gene_name=TSPY3;ID=NA12877_ch_T0000721;Name=TSPY3
NA12877_chrY	CAT	exon	9173852	9174149	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000721;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000721;transcript_name=NA12877_ch_T0000721;gene_name=TSPY3;ID=exon:NA12877_ch_T0000721:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9174150	9174244	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000721;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000721;transcript_name=NA12877_ch_T0000721;gene_name=TSPY3;ID=intron:NA12877_ch_T0000721:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9174245	9174337	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000721;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000721;transcript_name=NA12877_ch_T0000721;gene_name=TSPY3;ID=exon:NA12877_ch_T0000721:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9174338	9175031	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000721;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000721;transcript_name=NA12877_ch_T0000721;gene_name=TSPY3;ID=intron:NA12877_ch_T0000721:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9175032	9175234	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000721;gene_id=NA12877_ch_G0000229;Parent=NA12877_ch_T0000721;transcript_name=NA12877_ch_T0000721;gene_name=TSPY3;ID=exon:NA12877_ch_T0000721:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9182476	9190359	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1;gene_id=NA12877_ch_G0000230;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=NA12877_ch_G0000230;Name=FAM197Y8
NA12877_chrY	CAT	transcript	9182476	9190359	1000	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000722;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_G0000230;transcript_name=NA12877_ch_T0000722;gene_name=FAM197Y8;ID=NA12877_ch_T0000722;Name=FAM197Y8
NA12877_chrY	CAT	exon	9182476	9184604	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000722;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000722;transcript_name=NA12877_ch_T0000722;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000722:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9184605	9188151	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000722;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000722;transcript_name=NA12877_ch_T0000722;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000722:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9188152	9188237	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000722;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000722;transcript_name=NA12877_ch_T0000722;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000722:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9188238	9190038	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000722;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000722;transcript_name=NA12877_ch_T0000722;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000722:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9190039	9190148	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000722;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000722;transcript_name=NA12877_ch_T0000722;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000722:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9190149	9190344	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000722;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000722;transcript_name=NA12877_ch_T0000722;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000722:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9190345	9190359	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000722;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000722;transcript_name=NA12877_ch_T0000722;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000722:3;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9184544	9190140	1000	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000723;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_G0000230;transcript_name=NA12877_ch_T0000723;gene_name=FAM197Y8;ID=NA12877_ch_T0000723;Name=FAM197Y8
NA12877_chrY	CAT	exon	9184544	9184604	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000723;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000723;transcript_name=NA12877_ch_T0000723;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000723:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9184605	9188151	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000723;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000723;transcript_name=NA12877_ch_T0000723;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000723:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9188152	9188310	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000723;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000723;transcript_name=NA12877_ch_T0000723;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000723:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9188311	9189806	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000723;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000723;transcript_name=NA12877_ch_T0000723;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000723:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9189807	9189952	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000723;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000723;transcript_name=NA12877_ch_T0000723;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000723:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9189953	9190038	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000723;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000723;transcript_name=NA12877_ch_T0000723;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000723:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9190039	9190140	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000723;gene_id=NA12877_ch_G0000230;Parent=NA12877_ch_T0000723;transcript_name=NA12877_ch_T0000723;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000723:3;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9189804	9191770	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7;gene_id=NA12877_ch_G0000231;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=NA12877_ch_G0000231;Name=FAM197Y8
NA12877_chrY	CAT	transcript	9189804	9191770	1000	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000724;gene_id=NA12877_ch_G0000231;Parent=NA12877_ch_G0000231;transcript_name=NA12877_ch_T0000724;gene_name=FAM197Y8;ID=NA12877_ch_T0000724;Name=FAM197Y8
NA12877_chrY	CAT	exon	9189804	9189952	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000724;gene_id=NA12877_ch_G0000231;Parent=NA12877_ch_T0000724;transcript_name=NA12877_ch_T0000724;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000724:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9189953	9190038	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000724;gene_id=NA12877_ch_G0000231;Parent=NA12877_ch_T0000724;transcript_name=NA12877_ch_T0000724;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000724:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9190039	9190148	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000724;gene_id=NA12877_ch_G0000231;Parent=NA12877_ch_T0000724;transcript_name=NA12877_ch_T0000724;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000724:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9190149	9191469	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000724;gene_id=NA12877_ch_G0000231;Parent=NA12877_ch_T0000724;transcript_name=NA12877_ch_T0000724;gene_name=FAM197Y8;ID=intron:NA12877_ch_T0000724:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9191470	9191770	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA12877_ch_T0000724;gene_id=NA12877_ch_G0000231;Parent=NA12877_ch_T0000724;transcript_name=NA12877_ch_T0000724;gene_name=FAM197Y8;ID=exon:NA12877_ch_T0000724:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9192757	9195562	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1_3;gene_id=NA12877_ch_G0000232;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=NA12877_ch_G0000232;Name=ENSG00000301844
NA12877_chrY	CAT	transcript	9192757	9195562	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000725;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_G0000232;transcript_name=NA12877_ch_T0000725;gene_name=ENSG00000301844;ID=NA12877_ch_T0000725;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9192757	9193285	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000725;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000725;transcript_name=NA12877_ch_T0000725;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000725:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193286	9193892	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000725;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000725;transcript_name=NA12877_ch_T0000725;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000725:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9193893	9193970	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000725;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000725;transcript_name=NA12877_ch_T0000725;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000725:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193971	9194098	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000725;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000725;transcript_name=NA12877_ch_T0000725;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000725:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194099	9194210	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000725;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000725;transcript_name=NA12877_ch_T0000725;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000725:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194211	9194311	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000725;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000725;transcript_name=NA12877_ch_T0000725;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000725:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194312	9194457	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000725;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000725;transcript_name=NA12877_ch_T0000725;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000725:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194458	9194563	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000725;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000725;transcript_name=NA12877_ch_T0000725;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000725:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194564	9194645	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000725;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000725;transcript_name=NA12877_ch_T0000725;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000725:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194646	9195339	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000725;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000725;transcript_name=NA12877_ch_T0000725;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000725:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9195340	9195562	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000725;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000725;transcript_name=NA12877_ch_T0000725;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000725:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9192766	9195557	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000726;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_G0000232;transcript_name=NA12877_ch_T0000726;gene_name=ENSG00000301844;ID=NA12877_ch_T0000726;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9192766	9193285	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000726;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000726;transcript_name=NA12877_ch_T0000726;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000726:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193286	9193892	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000726;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000726;transcript_name=NA12877_ch_T0000726;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000726:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9193893	9193970	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000726;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000726;transcript_name=NA12877_ch_T0000726;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000726:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193971	9194098	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000726;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000726;transcript_name=NA12877_ch_T0000726;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000726:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194099	9194210	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000726;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000726;transcript_name=NA12877_ch_T0000726;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000726:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194211	9194318	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000726;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000726;transcript_name=NA12877_ch_T0000726;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000726:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194319	9194457	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000726;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000726;transcript_name=NA12877_ch_T0000726;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000726:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194458	9194563	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000726;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000726;transcript_name=NA12877_ch_T0000726;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000726:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194564	9194645	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000726;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000726;transcript_name=NA12877_ch_T0000726;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000726:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194646	9195339	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000726;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000726;transcript_name=NA12877_ch_T0000726;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000726:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9195340	9195557	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000726;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000726;transcript_name=NA12877_ch_T0000726;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000726:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9192788	9195552	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000727;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_G0000232;transcript_name=NA12877_ch_T0000727;gene_name=ENSG00000301844;ID=NA12877_ch_T0000727;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9192788	9193285	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000727;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000727;transcript_name=NA12877_ch_T0000727;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000727:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193286	9193892	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000727;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000727;transcript_name=NA12877_ch_T0000727;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000727:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9193893	9193970	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000727;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000727;transcript_name=NA12877_ch_T0000727;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000727:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193971	9194098	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000727;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000727;transcript_name=NA12877_ch_T0000727;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000727:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194099	9194210	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000727;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000727;transcript_name=NA12877_ch_T0000727;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000727:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194211	9194311	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000727;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000727;transcript_name=NA12877_ch_T0000727;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000727:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194312	9194645	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000727;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000727;transcript_name=NA12877_ch_T0000727;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000727:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194646	9195339	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000727;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000727;transcript_name=NA12877_ch_T0000727;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000727:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9195340	9195552	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000727;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000727;transcript_name=NA12877_ch_T0000727;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000727:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9192798	9195557	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000728;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_G0000232;transcript_name=NA12877_ch_T0000728;gene_name=ENSG00000301844;ID=NA12877_ch_T0000728;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9192798	9193285	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000728;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000728;transcript_name=NA12877_ch_T0000728;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000728:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193286	9193892	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000728;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000728;transcript_name=NA12877_ch_T0000728;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000728:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9193893	9193970	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000728;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000728;transcript_name=NA12877_ch_T0000728;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000728:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193971	9194098	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000728;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000728;transcript_name=NA12877_ch_T0000728;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000728:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194099	9194457	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000728;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000728;transcript_name=NA12877_ch_T0000728;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000728:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194458	9194563	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000728;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000728;transcript_name=NA12877_ch_T0000728;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000728:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194564	9194645	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000728;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000728;transcript_name=NA12877_ch_T0000728;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000728:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194646	9195339	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000728;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000728;transcript_name=NA12877_ch_T0000728;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000728:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9195340	9195557	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000728;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000728;transcript_name=NA12877_ch_T0000728;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000728:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9192800	9195557	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000729;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_G0000232;transcript_name=NA12877_ch_T0000729;gene_name=ENSG00000301844;ID=NA12877_ch_T0000729;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9192800	9193285	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000729;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000729;transcript_name=NA12877_ch_T0000729;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000729:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193286	9193892	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000729;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000729;transcript_name=NA12877_ch_T0000729;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000729:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9193893	9193970	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000729;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000729;transcript_name=NA12877_ch_T0000729;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000729:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193971	9194098	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000729;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000729;transcript_name=NA12877_ch_T0000729;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000729:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194099	9194210	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000729;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000729;transcript_name=NA12877_ch_T0000729;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000729:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194211	9194311	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000729;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000729;transcript_name=NA12877_ch_T0000729;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000729:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194312	9194457	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000729;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000729;transcript_name=NA12877_ch_T0000729;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000729:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194458	9194552	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000729;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000729;transcript_name=NA12877_ch_T0000729;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000729:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194553	9194645	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000729;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000729;transcript_name=NA12877_ch_T0000729;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000729:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194646	9195339	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000729;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000729;transcript_name=NA12877_ch_T0000729;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000729:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9195340	9195557	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000729;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000729;transcript_name=NA12877_ch_T0000729;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000729:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9192800	9195550	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000730;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_G0000232;transcript_name=NA12877_ch_T0000730;gene_name=ENSG00000301844;ID=NA12877_ch_T0000730;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9192800	9193285	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000730;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000730;transcript_name=NA12877_ch_T0000730;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000730:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193286	9193892	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000730;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000730;transcript_name=NA12877_ch_T0000730;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000730:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9193893	9193970	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000730;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000730;transcript_name=NA12877_ch_T0000730;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000730:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193971	9194098	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000730;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000730;transcript_name=NA12877_ch_T0000730;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000730:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194099	9194645	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000730;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000730;transcript_name=NA12877_ch_T0000730;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000730:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194646	9195339	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000730;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000730;transcript_name=NA12877_ch_T0000730;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000730:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9195340	9195550	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000730;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000730;transcript_name=NA12877_ch_T0000730;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000730:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9192820	9195557	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000732;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_G0000232;transcript_name=NA12877_ch_T0000732;gene_name=ENSG00000301844;ID=NA12877_ch_T0000732;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9192820	9193285	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000732;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000732;transcript_name=NA12877_ch_T0000732;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000732:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193286	9193892	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000732;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000732;transcript_name=NA12877_ch_T0000732;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000732:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9193893	9193970	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000732;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000732;transcript_name=NA12877_ch_T0000732;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000732:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193971	9194098	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000732;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000732;transcript_name=NA12877_ch_T0000732;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000732:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194099	9194457	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000732;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000732;transcript_name=NA12877_ch_T0000732;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000732:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194458	9194552	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000732;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000732;transcript_name=NA12877_ch_T0000732;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000732:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194553	9194645	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000732;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000732;transcript_name=NA12877_ch_T0000732;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000732:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194646	9195339	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000732;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000732;transcript_name=NA12877_ch_T0000732;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000732:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9195340	9195557	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000732;gene_id=NA12877_ch_G0000232;Parent=NA12877_ch_T0000732;transcript_name=NA12877_ch_T0000732;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000732:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9192800	9195550	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8_3;gene_id=NA12877_ch_G0000233;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=NA12877_ch_G0000233;Name=TSPY7P
NA12877_chrY	CAT	transcript	9192800	9195550	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000731;gene_id=NA12877_ch_G0000233;Parent=NA12877_ch_G0000233;transcript_name=NA12877_ch_T0000731;gene_name=TSPY7P;ID=NA12877_ch_T0000731;Name=TSPY7P
NA12877_chrY	CAT	exon	9192800	9193285	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000731;gene_id=NA12877_ch_G0000233;Parent=NA12877_ch_T0000731;transcript_name=NA12877_ch_T0000731;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000731:0;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193286	9193892	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000731;gene_id=NA12877_ch_G0000233;Parent=NA12877_ch_T0000731;transcript_name=NA12877_ch_T0000731;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000731:0;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9193893	9193970	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000731;gene_id=NA12877_ch_G0000233;Parent=NA12877_ch_T0000731;transcript_name=NA12877_ch_T0000731;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000731:1;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9193971	9194098	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000731;gene_id=NA12877_ch_G0000233;Parent=NA12877_ch_T0000731;transcript_name=NA12877_ch_T0000731;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000731:1;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194099	9194210	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000731;gene_id=NA12877_ch_G0000233;Parent=NA12877_ch_T0000731;transcript_name=NA12877_ch_T0000731;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000731:2;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194211	9194311	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000731;gene_id=NA12877_ch_G0000233;Parent=NA12877_ch_T0000731;transcript_name=NA12877_ch_T0000731;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000731:2;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194312	9194457	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000731;gene_id=NA12877_ch_G0000233;Parent=NA12877_ch_T0000731;transcript_name=NA12877_ch_T0000731;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000731:3;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194458	9194563	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000731;gene_id=NA12877_ch_G0000233;Parent=NA12877_ch_T0000731;transcript_name=NA12877_ch_T0000731;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000731:3;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9194564	9194645	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000731;gene_id=NA12877_ch_G0000233;Parent=NA12877_ch_T0000731;transcript_name=NA12877_ch_T0000731;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000731:4;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9194646	9195339	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000731;gene_id=NA12877_ch_G0000233;Parent=NA12877_ch_T0000731;transcript_name=NA12877_ch_T0000731;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000731:4;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9195340	9195550	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000731;gene_id=NA12877_ch_G0000233;Parent=NA12877_ch_T0000731;transcript_name=NA12877_ch_T0000731;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000731:5;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9204733	9210474	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_3;gene_id=NA12877_ch_G0000234;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000234;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9204733	9210474	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000733;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_G0000234;transcript_name=NA12877_ch_T0000733;gene_name=FAM197Y5;ID=NA12877_ch_T0000733;Name=FAM197Y5
NA12877_chrY	CAT	exon	9204733	9204922	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000733;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_T0000733;transcript_name=NA12877_ch_T0000733;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000733:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9204923	9208471	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000733;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_T0000733;transcript_name=NA12877_ch_T0000733;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000733:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9208472	9208557	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000733;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_T0000733;transcript_name=NA12877_ch_T0000733;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000733:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9208558	9210360	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000733;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_T0000733;transcript_name=NA12877_ch_T0000733;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000733:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9210361	9210474	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000733;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_T0000733;transcript_name=NA12877_ch_T0000733;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000733:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9204863	9210462	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000734;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_G0000234;transcript_name=NA12877_ch_T0000734;gene_name=FAM197Y5;ID=NA12877_ch_T0000734;Name=FAM197Y5
NA12877_chrY	CAT	exon	9204863	9204922	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000734;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_T0000734;transcript_name=NA12877_ch_T0000734;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000734:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9204923	9208471	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000734;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_T0000734;transcript_name=NA12877_ch_T0000734;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000734:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9208472	9208630	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000734;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_T0000734;transcript_name=NA12877_ch_T0000734;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000734:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9208631	9210128	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000734;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_T0000734;transcript_name=NA12877_ch_T0000734;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000734:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9210129	9210274	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000734;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_T0000734;transcript_name=NA12877_ch_T0000734;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000734:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9210275	9210360	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000734;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_T0000734;transcript_name=NA12877_ch_T0000734;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000734:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9210361	9210462	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000734;gene_id=NA12877_ch_G0000234;Parent=NA12877_ch_T0000734;transcript_name=NA12877_ch_T0000734;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000734:3;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9210129	9212121	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_7;gene_id=NA12877_ch_G0000235;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000235;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9210129	9212121	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000735;gene_id=NA12877_ch_G0000235;Parent=NA12877_ch_G0000235;transcript_name=NA12877_ch_T0000735;gene_name=FAM197Y5;ID=NA12877_ch_T0000735;Name=FAM197Y5
NA12877_chrY	CAT	exon	9210129	9210274	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000735;gene_id=NA12877_ch_G0000235;Parent=NA12877_ch_T0000735;transcript_name=NA12877_ch_T0000735;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000735:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9210275	9211810	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000735;gene_id=NA12877_ch_G0000235;Parent=NA12877_ch_T0000735;transcript_name=NA12877_ch_T0000735;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000735:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9211811	9212121	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000735;gene_id=NA12877_ch_G0000235;Parent=NA12877_ch_T0000735;transcript_name=NA12877_ch_T0000735;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000735:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9213075	9215871	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=NA12877_ch_G0000236;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA12877_ch_G0000236;Name=TSPY10
NA12877_chrY	CAT	transcript	9213075	9215871	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_G0000236;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=NA12877_ch_T0000736;Name=TSPY10
NA12877_chrY	CAT	exon	9213075	9213606	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=exon:NA12877_ch_T0000736:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9213121	9213606	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000736:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9213121	9213123	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=start_codon:NA12877_ch_T0000736;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9213607	9214213	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=intron:NA12877_ch_T0000736:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9214214	9214291	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=exon:NA12877_ch_T0000736:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9214214	9214291	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000736:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9214292	9214419	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=intron:NA12877_ch_T0000736:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9214420	9214531	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=exon:NA12877_ch_T0000736:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9214420	9214531	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000736:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9214532	9214632	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=intron:NA12877_ch_T0000736:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9214633	9214778	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=exon:NA12877_ch_T0000736:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9214633	9214778	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000736:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9214779	9214884	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=intron:NA12877_ch_T0000736:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9214885	9214966	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=exon:NA12877_ch_T0000736:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9214885	9214966	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000736:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9214967	9215660	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=intron:NA12877_ch_T0000736:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9215661	9215871	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=exon:NA12877_ch_T0000736:5;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9215661	9215683	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000736:5;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9215681	9215683	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000736;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000736;transcript_name=NA12877_ch_T0000736;gene_name=TSPY10;ID=stop_codon:NA12877_ch_T0000736;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9213121	9215870	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_G0000236;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=NA12877_ch_T0000737;Name=TSPY10
NA12877_chrY	CAT	exon	9213121	9213606	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=exon:NA12877_ch_T0000737:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9213121	9213606	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000737:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9213121	9213123	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=start_codon:NA12877_ch_T0000737;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9213607	9214213	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=intron:NA12877_ch_T0000737:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9214214	9214291	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=exon:NA12877_ch_T0000737:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9214214	9214291	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000737:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9214292	9214419	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=intron:NA12877_ch_T0000737:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9214420	9214531	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=exon:NA12877_ch_T0000737:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9214420	9214531	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000737:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9214532	9214632	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=intron:NA12877_ch_T0000737:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9214633	9214778	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=exon:NA12877_ch_T0000737:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9214633	9214778	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000737:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9214779	9214873	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=intron:NA12877_ch_T0000737:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9214874	9214966	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=exon:NA12877_ch_T0000737:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9214874	9214936	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=CDS:NA12877_ch_T0000737:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9214934	9214936	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=stop_codon:NA12877_ch_T0000737;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9214967	9215660	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=intron:NA12877_ch_T0000737:4;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9215661	9215870	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000737;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000737;transcript_name=NA12877_ch_T0000737;gene_name=TSPY10;ID=exon:NA12877_ch_T0000737:5;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9213121	9215877	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000738;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_G0000236;transcript_name=NA12877_ch_T0000738;gene_name=TSPY10;ID=NA12877_ch_T0000738;Name=TSPY10
NA12877_chrY	CAT	exon	9213121	9213606	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000738;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000738;transcript_name=NA12877_ch_T0000738;gene_name=TSPY10;ID=exon:NA12877_ch_T0000738:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9213607	9214213	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000738;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000738;transcript_name=NA12877_ch_T0000738;gene_name=TSPY10;ID=intron:NA12877_ch_T0000738:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9214214	9214291	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000738;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000738;transcript_name=NA12877_ch_T0000738;gene_name=TSPY10;ID=exon:NA12877_ch_T0000738:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9214292	9214419	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000738;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000738;transcript_name=NA12877_ch_T0000738;gene_name=TSPY10;ID=intron:NA12877_ch_T0000738:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9214420	9214966	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000738;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000738;transcript_name=NA12877_ch_T0000738;gene_name=TSPY10;ID=exon:NA12877_ch_T0000738:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9214967	9215093	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000738;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000738;transcript_name=NA12877_ch_T0000738;gene_name=TSPY10;ID=intron:NA12877_ch_T0000738:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9215094	9215877	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000738;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000738;transcript_name=NA12877_ch_T0000738;gene_name=TSPY10;ID=exon:NA12877_ch_T0000738:3;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9214481	9215862	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000739;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_G0000236;transcript_name=NA12877_ch_T0000739;gene_name=TSPY10;ID=NA12877_ch_T0000739;Name=TSPY10
NA12877_chrY	CAT	exon	9214481	9214778	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000739;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000739;transcript_name=NA12877_ch_T0000739;gene_name=TSPY10;ID=exon:NA12877_ch_T0000739:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9214779	9214884	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000739;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000739;transcript_name=NA12877_ch_T0000739;gene_name=TSPY10;ID=intron:NA12877_ch_T0000739:0;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9214885	9214966	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000739;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000739;transcript_name=NA12877_ch_T0000739;gene_name=TSPY10;ID=exon:NA12877_ch_T0000739:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9214967	9215660	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000739;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000739;transcript_name=NA12877_ch_T0000739;gene_name=TSPY10;ID=intron:NA12877_ch_T0000739:1;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9215661	9215862	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=NA12877_ch_T0000739;gene_id=NA12877_ch_G0000236;Parent=NA12877_ch_T0000739;transcript_name=NA12877_ch_T0000739;gene_name=TSPY10;ID=exon:NA12877_ch_T0000739:2;Name=TSPY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9223071	9230767	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_2;gene_id=NA12877_ch_G0000237;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000237;Name=FAM197Y9
NA12877_chrY	CAT	transcript	9223071	9230767	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000740;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_G0000237;transcript_name=NA12877_ch_T0000740;gene_name=FAM197Y9;ID=NA12877_ch_T0000740;Name=FAM197Y9
NA12877_chrY	CAT	exon	9223071	9225198	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000740;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_T0000740;transcript_name=NA12877_ch_T0000740;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000740:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9225199	9228748	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000740;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_T0000740;transcript_name=NA12877_ch_T0000740;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000740:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9228749	9228834	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000740;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_T0000740;transcript_name=NA12877_ch_T0000740;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000740:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9228835	9230647	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000740;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_T0000740;transcript_name=NA12877_ch_T0000740;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000740:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9230648	9230767	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000740;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_T0000740;transcript_name=NA12877_ch_T0000740;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000740:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9225139	9230749	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000741;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_G0000237;transcript_name=NA12877_ch_T0000741;gene_name=FAM197Y9;ID=NA12877_ch_T0000741;Name=FAM197Y9
NA12877_chrY	CAT	exon	9225139	9225198	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000741;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_T0000741;transcript_name=NA12877_ch_T0000741;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000741:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9225199	9228748	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000741;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_T0000741;transcript_name=NA12877_ch_T0000741;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000741:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9228749	9228907	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000741;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_T0000741;transcript_name=NA12877_ch_T0000741;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000741:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9228908	9230415	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000741;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_T0000741;transcript_name=NA12877_ch_T0000741;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000741:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9230416	9230561	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000741;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_T0000741;transcript_name=NA12877_ch_T0000741;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000741:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9230562	9230647	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000741;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_T0000741;transcript_name=NA12877_ch_T0000741;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000741:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9230648	9230749	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000741;gene_id=NA12877_ch_G0000237;Parent=NA12877_ch_T0000741;transcript_name=NA12877_ch_T0000741;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000741:3;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9230416	9232409	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_3;gene_id=NA12877_ch_G0000238;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000238;Name=FAM197Y9
NA12877_chrY	CAT	transcript	9230416	9232409	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000742;gene_id=NA12877_ch_G0000238;Parent=NA12877_ch_G0000238;transcript_name=NA12877_ch_T0000742;gene_name=FAM197Y9;ID=NA12877_ch_T0000742;Name=FAM197Y9
NA12877_chrY	CAT	exon	9230416	9230561	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000742;gene_id=NA12877_ch_G0000238;Parent=NA12877_ch_T0000742;transcript_name=NA12877_ch_T0000742;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000742:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9230562	9230673	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000742;gene_id=NA12877_ch_G0000238;Parent=NA12877_ch_T0000742;transcript_name=NA12877_ch_T0000742;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000742:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9230674	9230757	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000742;gene_id=NA12877_ch_G0000238;Parent=NA12877_ch_T0000742;transcript_name=NA12877_ch_T0000742;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000742:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9230758	9232099	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000742;gene_id=NA12877_ch_G0000238;Parent=NA12877_ch_T0000742;transcript_name=NA12877_ch_T0000742;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000742:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9232100	9232409	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000742;gene_id=NA12877_ch_G0000238;Parent=NA12877_ch_T0000742;transcript_name=NA12877_ch_T0000742;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000742:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9233402	9236170	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=NA12877_ch_G0000239;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=NA12877_ch_G0000239;Name=ENSG00000293749
NA12877_chrY	CAT	transcript	9233402	9236170	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_G0000239;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=NA12877_ch_T0000743;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9233402	9233494	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000743:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9233495	9233755	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000743:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9233756	9233893	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000743:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9233894	9234500	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000743:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234501	9234578	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000743:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234579	9234706	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000743:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234707	9234818	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000743:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234819	9234919	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000743:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234920	9235065	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000743:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235066	9235171	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000743:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235172	9235253	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000743:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235254	9235947	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000743:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235948	9236170	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000743;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000743;transcript_name=NA12877_ch_T0000743;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000743:6;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9233414	9236158	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_G0000239;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=NA12877_ch_T0000745;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9233414	9233494	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000745:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9233495	9233755	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000745:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9233756	9233893	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000745:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9233894	9234500	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000745:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234501	9234578	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000745:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234579	9234706	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000745:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234707	9234818	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000745:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234819	9234926	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000745:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234927	9235065	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000745:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235066	9235171	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000745:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235172	9235253	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000745:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235254	9235947	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000745:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235948	9236158	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000745;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000745;transcript_name=NA12877_ch_T0000745;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000745:6;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9233423	9236165	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_G0000239;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=NA12877_ch_T0000746;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9233423	9233494	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000746:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9233495	9233755	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000746:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9233756	9233893	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000746:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9233894	9234500	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000746:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234501	9234578	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000746:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234579	9234706	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000746:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234707	9234818	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000746:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234819	9234919	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000746:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234920	9235065	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000746:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235066	9235160	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000746:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235161	9235253	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000746:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235254	9235947	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000746:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235948	9236165	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000746;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000746;transcript_name=NA12877_ch_T0000746;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000746:6;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9233625	9236163	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000747;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_G0000239;transcript_name=NA12877_ch_T0000747;gene_name=ENSG00000293749;ID=NA12877_ch_T0000747;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9233625	9233893	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000747;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000747;transcript_name=NA12877_ch_T0000747;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000747:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9233894	9234500	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000747;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000747;transcript_name=NA12877_ch_T0000747;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000747:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234501	9234578	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000747;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000747;transcript_name=NA12877_ch_T0000747;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000747:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234579	9234706	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000747;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000747;transcript_name=NA12877_ch_T0000747;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000747:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234707	9234818	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000747;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000747;transcript_name=NA12877_ch_T0000747;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000747:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234819	9234919	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000747;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000747;transcript_name=NA12877_ch_T0000747;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000747:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234920	9235065	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000747;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000747;transcript_name=NA12877_ch_T0000747;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000747:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235066	9235171	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000747;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000747;transcript_name=NA12877_ch_T0000747;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000747:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235172	9235253	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000747;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000747;transcript_name=NA12877_ch_T0000747;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000747:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235254	9235947	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000747;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000747;transcript_name=NA12877_ch_T0000747;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000747:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235948	9236163	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000747;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000747;transcript_name=NA12877_ch_T0000747;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000747:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9233721	9236158	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000748;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_G0000239;transcript_name=NA12877_ch_T0000748;gene_name=ENSG00000293749;ID=NA12877_ch_T0000748;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9233721	9233893	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000748;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000748;transcript_name=NA12877_ch_T0000748;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000748:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9233894	9234500	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000748;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000748;transcript_name=NA12877_ch_T0000748;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000748:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234501	9234578	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000748;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000748;transcript_name=NA12877_ch_T0000748;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000748:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234579	9234706	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000748;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000748;transcript_name=NA12877_ch_T0000748;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000748:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234707	9234818	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000748;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000748;transcript_name=NA12877_ch_T0000748;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000748:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234819	9234926	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000748;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000748;transcript_name=NA12877_ch_T0000748;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000748:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234927	9235065	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000748;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000748;transcript_name=NA12877_ch_T0000748;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000748:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235066	9235171	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000748;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000748;transcript_name=NA12877_ch_T0000748;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000748:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235172	9235253	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000748;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000748;transcript_name=NA12877_ch_T0000748;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000748:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235254	9235947	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000748;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000748;transcript_name=NA12877_ch_T0000748;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000748:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235948	9236158	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000748;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000748;transcript_name=NA12877_ch_T0000748;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000748:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9233847	9236169	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000749;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_G0000239;transcript_name=NA12877_ch_T0000749;gene_name=ENSG00000293749;ID=NA12877_ch_T0000749;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9233847	9233949	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000749;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000749;transcript_name=NA12877_ch_T0000749;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000749:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9233950	9234518	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000749;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000749;transcript_name=NA12877_ch_T0000749;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000749:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234519	9234578	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000749;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000749;transcript_name=NA12877_ch_T0000749;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000749:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234579	9234706	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000749;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000749;transcript_name=NA12877_ch_T0000749;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000749:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234707	9234818	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000749;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000749;transcript_name=NA12877_ch_T0000749;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000749:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234819	9234919	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000749;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000749;transcript_name=NA12877_ch_T0000749;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000749:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234920	9235065	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000749;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000749;transcript_name=NA12877_ch_T0000749;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000749:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235066	9235171	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000749;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000749;transcript_name=NA12877_ch_T0000749;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000749:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235172	9235253	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000749;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000749;transcript_name=NA12877_ch_T0000749;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000749:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235254	9235947	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000749;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000749;transcript_name=NA12877_ch_T0000749;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000749:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235948	9236169	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000749;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000749;transcript_name=NA12877_ch_T0000749;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000749:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9234548	9236156	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000750;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_G0000239;transcript_name=NA12877_ch_T0000750;gene_name=ENSG00000293749;ID=NA12877_ch_T0000750;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9234548	9234578	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000750;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000750;transcript_name=NA12877_ch_T0000750;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000750:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234579	9234706	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000750;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000750;transcript_name=NA12877_ch_T0000750;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000750:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234707	9235065	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000750;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000750;transcript_name=NA12877_ch_T0000750;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000750:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235066	9235171	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000750;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000750;transcript_name=NA12877_ch_T0000750;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000750:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235172	9235253	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000750;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000750;transcript_name=NA12877_ch_T0000750;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000750:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235254	9235947	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000750;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000750;transcript_name=NA12877_ch_T0000750;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000750:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235948	9236156	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000750;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000750;transcript_name=NA12877_ch_T0000750;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000750:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9235093	9236165	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000751;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_G0000239;transcript_name=NA12877_ch_T0000751;gene_name=ENSG00000293749;ID=NA12877_ch_T0000751;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9235093	9235253	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000751;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000751;transcript_name=NA12877_ch_T0000751;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000751:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235254	9235947	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000751;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000751;transcript_name=NA12877_ch_T0000751;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000751:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235948	9236165	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000751;gene_id=NA12877_ch_G0000239;Parent=NA12877_ch_T0000751;transcript_name=NA12877_ch_T0000751;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000751:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9233408	9235970	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_2;gene_id=NA12877_ch_G0000240;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=NA12877_ch_G0000240;Name=TSPY6P
NA12877_chrY	CAT	transcript	9233408	9235970	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_G0000240;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=NA12877_ch_T0000744;Name=TSPY6P
NA12877_chrY	CAT	exon	9233408	9233618	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000744:0;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9233619	9233626	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000744:0;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9233627	9233893	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000744:1;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9233894	9234500	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000744:1;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234501	9234578	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000744:2;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234579	9234706	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000744:2;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234707	9234818	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000744:3;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9234819	9234919	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000744:3;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9234920	9235065	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000744:4;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235066	9235171	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000744:4;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235172	9235253	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000744:5;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9235254	9235947	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000744:5;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9235948	9235970	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000744;gene_id=NA12877_ch_G0000240;Parent=NA12877_ch_T0000744;transcript_name=NA12877_ch_T0000744;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000744:6;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9243361	9251048	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1;gene_id=NA12877_ch_G0000241;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000241;Name=FAM197Y9
NA12877_chrY	CAT	transcript	9243361	9251048	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000752;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_G0000241;transcript_name=NA12877_ch_T0000752;gene_name=FAM197Y9;ID=NA12877_ch_T0000752;Name=FAM197Y9
NA12877_chrY	CAT	exon	9243361	9245488	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000752;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_T0000752;transcript_name=NA12877_ch_T0000752;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000752:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9245489	9249039	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000752;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_T0000752;transcript_name=NA12877_ch_T0000752;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000752:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9249040	9249125	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000752;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_T0000752;transcript_name=NA12877_ch_T0000752;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000752:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9249126	9250928	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000752;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_T0000752;transcript_name=NA12877_ch_T0000752;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000752:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9250929	9251048	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000752;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_T0000752;transcript_name=NA12877_ch_T0000752;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000752:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9245429	9251030	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000753;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_G0000241;transcript_name=NA12877_ch_T0000753;gene_name=FAM197Y9;ID=NA12877_ch_T0000753;Name=FAM197Y9
NA12877_chrY	CAT	exon	9245429	9245488	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000753;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_T0000753;transcript_name=NA12877_ch_T0000753;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000753:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9245489	9249039	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000753;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_T0000753;transcript_name=NA12877_ch_T0000753;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000753:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9249040	9249198	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000753;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_T0000753;transcript_name=NA12877_ch_T0000753;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000753:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9249199	9250696	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000753;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_T0000753;transcript_name=NA12877_ch_T0000753;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000753:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9250697	9250842	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000753;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_T0000753;transcript_name=NA12877_ch_T0000753;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000753:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9250843	9250928	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000753;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_T0000753;transcript_name=NA12877_ch_T0000753;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000753:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9250929	9251030	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000753;gene_id=NA12877_ch_G0000241;Parent=NA12877_ch_T0000753;transcript_name=NA12877_ch_T0000753;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000753:3;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9250697	9252690	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9;gene_id=NA12877_ch_G0000242;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA12877_ch_G0000242;Name=FAM197Y9
NA12877_chrY	CAT	transcript	9250697	9252690	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000754;gene_id=NA12877_ch_G0000242;Parent=NA12877_ch_G0000242;transcript_name=NA12877_ch_T0000754;gene_name=FAM197Y9;ID=NA12877_ch_T0000754;Name=FAM197Y9
NA12877_chrY	CAT	exon	9250697	9250842	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000754;gene_id=NA12877_ch_G0000242;Parent=NA12877_ch_T0000754;transcript_name=NA12877_ch_T0000754;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000754:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9250843	9250954	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000754;gene_id=NA12877_ch_G0000242;Parent=NA12877_ch_T0000754;transcript_name=NA12877_ch_T0000754;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000754:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9250955	9251038	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000754;gene_id=NA12877_ch_G0000242;Parent=NA12877_ch_T0000754;transcript_name=NA12877_ch_T0000754;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000754:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9251039	9252380	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000754;gene_id=NA12877_ch_G0000242;Parent=NA12877_ch_T0000754;transcript_name=NA12877_ch_T0000754;gene_name=FAM197Y9;ID=intron:NA12877_ch_T0000754:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9252381	9252690	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=NA12877_ch_T0000754;gene_id=NA12877_ch_G0000242;Parent=NA12877_ch_T0000754;transcript_name=NA12877_ch_T0000754;gene_name=FAM197Y9;ID=exon:NA12877_ch_T0000754:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9253647	9256452	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1;gene_id=NA12877_ch_G0000243;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=NA12877_ch_G0000243;Name=ENSG00000301844
NA12877_chrY	CAT	transcript	9253647	9256452	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000755;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_G0000243;transcript_name=NA12877_ch_T0000755;gene_name=ENSG00000301844;ID=NA12877_ch_T0000755;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9253647	9254175	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000755;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000755;transcript_name=NA12877_ch_T0000755;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000755:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254176	9254782	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000755;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000755;transcript_name=NA12877_ch_T0000755;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000755:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254783	9254860	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000755;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000755;transcript_name=NA12877_ch_T0000755;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000755:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254861	9254988	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000755;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000755;transcript_name=NA12877_ch_T0000755;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000755:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254989	9255100	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000755;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000755;transcript_name=NA12877_ch_T0000755;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000755:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255101	9255201	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000755;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000755;transcript_name=NA12877_ch_T0000755;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000755:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9255202	9255347	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000755;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000755;transcript_name=NA12877_ch_T0000755;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000755:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255348	9255453	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000755;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000755;transcript_name=NA12877_ch_T0000755;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000755:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9255454	9255535	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000755;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000755;transcript_name=NA12877_ch_T0000755;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000755:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255536	9256229	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000755;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000755;transcript_name=NA12877_ch_T0000755;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000755:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9256230	9256452	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000755;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000755;transcript_name=NA12877_ch_T0000755;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000755:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9253656	9256447	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000756;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_G0000243;transcript_name=NA12877_ch_T0000756;gene_name=ENSG00000301844;ID=NA12877_ch_T0000756;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9253656	9254175	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000756;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000756;transcript_name=NA12877_ch_T0000756;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000756:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254176	9254782	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000756;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000756;transcript_name=NA12877_ch_T0000756;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000756:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254783	9254860	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000756;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000756;transcript_name=NA12877_ch_T0000756;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000756:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254861	9254988	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000756;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000756;transcript_name=NA12877_ch_T0000756;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000756:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254989	9255100	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000756;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000756;transcript_name=NA12877_ch_T0000756;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000756:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255101	9255208	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000756;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000756;transcript_name=NA12877_ch_T0000756;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000756:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9255209	9255347	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000756;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000756;transcript_name=NA12877_ch_T0000756;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000756:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255348	9255453	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000756;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000756;transcript_name=NA12877_ch_T0000756;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000756:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9255454	9255535	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000756;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000756;transcript_name=NA12877_ch_T0000756;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000756:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255536	9256229	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000756;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000756;transcript_name=NA12877_ch_T0000756;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000756:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9256230	9256447	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000756;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000756;transcript_name=NA12877_ch_T0000756;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000756:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9253678	9256442	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000757;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_G0000243;transcript_name=NA12877_ch_T0000757;gene_name=ENSG00000301844;ID=NA12877_ch_T0000757;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9253678	9254175	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000757;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000757;transcript_name=NA12877_ch_T0000757;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000757:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254176	9254782	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000757;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000757;transcript_name=NA12877_ch_T0000757;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000757:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254783	9254860	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000757;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000757;transcript_name=NA12877_ch_T0000757;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000757:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254861	9254988	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000757;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000757;transcript_name=NA12877_ch_T0000757;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000757:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254989	9255100	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000757;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000757;transcript_name=NA12877_ch_T0000757;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000757:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255101	9255201	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000757;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000757;transcript_name=NA12877_ch_T0000757;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000757:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9255202	9255535	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000757;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000757;transcript_name=NA12877_ch_T0000757;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000757:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255536	9256229	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000757;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000757;transcript_name=NA12877_ch_T0000757;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000757:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9256230	9256442	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000757;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000757;transcript_name=NA12877_ch_T0000757;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000757:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9253688	9256447	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000758;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_G0000243;transcript_name=NA12877_ch_T0000758;gene_name=ENSG00000301844;ID=NA12877_ch_T0000758;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9253688	9254175	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000758;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000758;transcript_name=NA12877_ch_T0000758;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000758:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254176	9254782	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000758;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000758;transcript_name=NA12877_ch_T0000758;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000758:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254783	9254860	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000758;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000758;transcript_name=NA12877_ch_T0000758;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000758:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254861	9254988	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000758;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000758;transcript_name=NA12877_ch_T0000758;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000758:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254989	9255347	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000758;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000758;transcript_name=NA12877_ch_T0000758;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000758:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255348	9255453	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000758;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000758;transcript_name=NA12877_ch_T0000758;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000758:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9255454	9255535	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000758;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000758;transcript_name=NA12877_ch_T0000758;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000758:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255536	9256229	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000758;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000758;transcript_name=NA12877_ch_T0000758;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000758:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9256230	9256447	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000758;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000758;transcript_name=NA12877_ch_T0000758;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000758:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9253690	9256447	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000759;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_G0000243;transcript_name=NA12877_ch_T0000759;gene_name=ENSG00000301844;ID=NA12877_ch_T0000759;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9253690	9254175	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000759;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000759;transcript_name=NA12877_ch_T0000759;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000759:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254176	9254782	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000759;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000759;transcript_name=NA12877_ch_T0000759;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000759:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254783	9254860	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000759;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000759;transcript_name=NA12877_ch_T0000759;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000759:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254861	9254988	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000759;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000759;transcript_name=NA12877_ch_T0000759;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000759:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254989	9255100	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000759;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000759;transcript_name=NA12877_ch_T0000759;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000759:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255101	9255201	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000759;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000759;transcript_name=NA12877_ch_T0000759;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000759:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9255202	9255347	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000759;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000759;transcript_name=NA12877_ch_T0000759;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000759:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255348	9255442	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000759;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000759;transcript_name=NA12877_ch_T0000759;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000759:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9255443	9255535	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000759;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000759;transcript_name=NA12877_ch_T0000759;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000759:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255536	9256229	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000759;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000759;transcript_name=NA12877_ch_T0000759;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000759:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9256230	9256447	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000759;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000759;transcript_name=NA12877_ch_T0000759;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000759:5;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9253690	9256440	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000760;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_G0000243;transcript_name=NA12877_ch_T0000760;gene_name=ENSG00000301844;ID=NA12877_ch_T0000760;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9253690	9254175	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000760;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000760;transcript_name=NA12877_ch_T0000760;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000760:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254176	9254782	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000760;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000760;transcript_name=NA12877_ch_T0000760;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000760:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254783	9254860	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000760;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000760;transcript_name=NA12877_ch_T0000760;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000760:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254861	9254988	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000760;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000760;transcript_name=NA12877_ch_T0000760;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000760:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254989	9255535	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000760;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000760;transcript_name=NA12877_ch_T0000760;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000760:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255536	9256229	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000760;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000760;transcript_name=NA12877_ch_T0000760;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000760:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9256230	9256440	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000760;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000760;transcript_name=NA12877_ch_T0000760;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000760:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9253710	9256447	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000762;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_G0000243;transcript_name=NA12877_ch_T0000762;gene_name=ENSG00000301844;ID=NA12877_ch_T0000762;Name=ENSG00000301844
NA12877_chrY	CAT	exon	9253710	9254175	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000762;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000762;transcript_name=NA12877_ch_T0000762;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000762:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254176	9254782	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000762;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000762;transcript_name=NA12877_ch_T0000762;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000762:0;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254783	9254860	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000762;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000762;transcript_name=NA12877_ch_T0000762;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000762:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254861	9254988	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000762;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000762;transcript_name=NA12877_ch_T0000762;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000762:1;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254989	9255347	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000762;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000762;transcript_name=NA12877_ch_T0000762;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000762:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255348	9255442	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000762;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000762;transcript_name=NA12877_ch_T0000762;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000762:2;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9255443	9255535	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000762;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000762;transcript_name=NA12877_ch_T0000762;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000762:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255536	9256229	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000762;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000762;transcript_name=NA12877_ch_T0000762;gene_name=ENSG00000301844;ID=intron:NA12877_ch_T0000762:3;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9256230	9256447	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=NA12877_ch_T0000762;gene_id=NA12877_ch_G0000243;Parent=NA12877_ch_T0000762;transcript_name=NA12877_ch_T0000762;gene_name=ENSG00000301844;ID=exon:NA12877_ch_T0000762:4;Name=ENSG00000301844;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9253690	9256440	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8;gene_id=NA12877_ch_G0000244;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=NA12877_ch_G0000244;Name=TSPY7P
NA12877_chrY	CAT	transcript	9253690	9256440	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000761;gene_id=NA12877_ch_G0000244;Parent=NA12877_ch_G0000244;transcript_name=NA12877_ch_T0000761;gene_name=TSPY7P;ID=NA12877_ch_T0000761;Name=TSPY7P
NA12877_chrY	CAT	exon	9253690	9254175	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000761;gene_id=NA12877_ch_G0000244;Parent=NA12877_ch_T0000761;transcript_name=NA12877_ch_T0000761;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000761:0;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254176	9254782	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000761;gene_id=NA12877_ch_G0000244;Parent=NA12877_ch_T0000761;transcript_name=NA12877_ch_T0000761;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000761:0;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254783	9254860	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000761;gene_id=NA12877_ch_G0000244;Parent=NA12877_ch_T0000761;transcript_name=NA12877_ch_T0000761;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000761:1;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9254861	9254988	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000761;gene_id=NA12877_ch_G0000244;Parent=NA12877_ch_T0000761;transcript_name=NA12877_ch_T0000761;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000761:1;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9254989	9255100	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000761;gene_id=NA12877_ch_G0000244;Parent=NA12877_ch_T0000761;transcript_name=NA12877_ch_T0000761;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000761:2;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255101	9255201	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000761;gene_id=NA12877_ch_G0000244;Parent=NA12877_ch_T0000761;transcript_name=NA12877_ch_T0000761;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000761:2;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9255202	9255347	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000761;gene_id=NA12877_ch_G0000244;Parent=NA12877_ch_T0000761;transcript_name=NA12877_ch_T0000761;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000761:3;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255348	9255453	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000761;gene_id=NA12877_ch_G0000244;Parent=NA12877_ch_T0000761;transcript_name=NA12877_ch_T0000761;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000761:3;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9255454	9255535	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000761;gene_id=NA12877_ch_G0000244;Parent=NA12877_ch_T0000761;transcript_name=NA12877_ch_T0000761;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000761:4;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9255536	9256229	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000761;gene_id=NA12877_ch_G0000244;Parent=NA12877_ch_T0000761;transcript_name=NA12877_ch_T0000761;gene_name=TSPY7P;ID=intron:NA12877_ch_T0000761:4;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9256230	9256440	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=NA12877_ch_T0000761;gene_id=NA12877_ch_G0000244;Parent=NA12877_ch_T0000761;transcript_name=NA12877_ch_T0000761;gene_name=TSPY7P;ID=exon:NA12877_ch_T0000761:5;Name=TSPY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9265580	9271333	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_1;gene_id=NA12877_ch_G0000245;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000245;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9265580	9271333	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000763;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_G0000245;transcript_name=NA12877_ch_T0000763;gene_name=FAM197Y5;ID=NA12877_ch_T0000763;Name=FAM197Y5
NA12877_chrY	CAT	exon	9265580	9265769	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000763;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_T0000763;transcript_name=NA12877_ch_T0000763;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000763:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9265770	9269324	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000763;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_T0000763;transcript_name=NA12877_ch_T0000763;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000763:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9269325	9269410	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000763;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_T0000763;transcript_name=NA12877_ch_T0000763;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000763:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9269411	9271219	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000763;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_T0000763;transcript_name=NA12877_ch_T0000763;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000763:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9271220	9271333	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000763;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_T0000763;transcript_name=NA12877_ch_T0000763;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000763:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9265710	9271321	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000764;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_G0000245;transcript_name=NA12877_ch_T0000764;gene_name=FAM197Y5;ID=NA12877_ch_T0000764;Name=FAM197Y5
NA12877_chrY	CAT	exon	9265710	9265769	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000764;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_T0000764;transcript_name=NA12877_ch_T0000764;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000764:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9265770	9269324	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000764;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_T0000764;transcript_name=NA12877_ch_T0000764;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000764:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9269325	9269483	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000764;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_T0000764;transcript_name=NA12877_ch_T0000764;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000764:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9269484	9270987	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000764;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_T0000764;transcript_name=NA12877_ch_T0000764;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000764:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9270988	9271133	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000764;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_T0000764;transcript_name=NA12877_ch_T0000764;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000764:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9271134	9271219	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000764;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_T0000764;transcript_name=NA12877_ch_T0000764;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000764:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9271220	9271321	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000764;gene_id=NA12877_ch_G0000245;Parent=NA12877_ch_T0000764;transcript_name=NA12877_ch_T0000764;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000764:3;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9270988	9272980	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_3;gene_id=NA12877_ch_G0000246;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000246;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9270988	9272980	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000765;gene_id=NA12877_ch_G0000246;Parent=NA12877_ch_G0000246;transcript_name=NA12877_ch_T0000765;gene_name=FAM197Y5;ID=NA12877_ch_T0000765;Name=FAM197Y5
NA12877_chrY	CAT	exon	9270988	9271133	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000765;gene_id=NA12877_ch_G0000246;Parent=NA12877_ch_T0000765;transcript_name=NA12877_ch_T0000765;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000765:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9271134	9272669	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000765;gene_id=NA12877_ch_G0000246;Parent=NA12877_ch_T0000765;transcript_name=NA12877_ch_T0000765;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000765:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9272670	9272980	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000765;gene_id=NA12877_ch_G0000246;Parent=NA12877_ch_T0000765;transcript_name=NA12877_ch_T0000765;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000765:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9273934	9276731	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=NA12877_ch_G0000247;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=NA12877_ch_G0000247;Name=TSPY3
NA12877_chrY	CAT	transcript	9273934	9276731	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_G0000247;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=NA12877_ch_T0000766;Name=TSPY3
NA12877_chrY	CAT	exon	9273934	9274465	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=exon:NA12877_ch_T0000766:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9273980	9274465	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000766:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9273980	9273982	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=start_codon:NA12877_ch_T0000766;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9274466	9275072	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=intron:NA12877_ch_T0000766:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275073	9275150	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=exon:NA12877_ch_T0000766:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9275073	9275150	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000766:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275151	9275278	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=intron:NA12877_ch_T0000766:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275279	9275390	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=exon:NA12877_ch_T0000766:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9275279	9275390	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000766:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275391	9275491	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=intron:NA12877_ch_T0000766:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275492	9275637	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=exon:NA12877_ch_T0000766:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9275492	9275637	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000766:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275638	9275743	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=intron:NA12877_ch_T0000766:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275744	9275825	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=exon:NA12877_ch_T0000766:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9275744	9275825	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000766:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275826	9276519	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=intron:NA12877_ch_T0000766:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9276520	9276731	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=exon:NA12877_ch_T0000766:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9276520	9276542	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000766:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9276540	9276542	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000766;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000766;transcript_name=NA12877_ch_T0000766;gene_name=TSPY3;ID=stop_codon:NA12877_ch_T0000766;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9273980	9276730	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_G0000247;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=NA12877_ch_T0000767;Name=TSPY3
NA12877_chrY	CAT	exon	9273980	9274465	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=exon:NA12877_ch_T0000767:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9273980	9274465	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000767:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9273980	9273982	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=start_codon:NA12877_ch_T0000767;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9274466	9275072	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=intron:NA12877_ch_T0000767:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275073	9275150	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=exon:NA12877_ch_T0000767:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9275073	9275150	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000767:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275151	9275278	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=intron:NA12877_ch_T0000767:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275279	9275390	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=exon:NA12877_ch_T0000767:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9275279	9275390	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000767:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275391	9275491	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=intron:NA12877_ch_T0000767:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275492	9275637	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=exon:NA12877_ch_T0000767:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9275492	9275637	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000767:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275638	9275732	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=intron:NA12877_ch_T0000767:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275733	9275825	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=exon:NA12877_ch_T0000767:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9275733	9275795	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000767:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9275793	9275795	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=stop_codon:NA12877_ch_T0000767;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275826	9276519	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=intron:NA12877_ch_T0000767:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9276520	9276730	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000767;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000767;transcript_name=NA12877_ch_T0000767;gene_name=TSPY3;ID=exon:NA12877_ch_T0000767:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9273980	9276542	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_G0000247;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=NA12877_ch_T0000768;Name=TSPY3
NA12877_chrY	CAT	exon	9273980	9274066	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=exon:NA12877_ch_T0000768:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9273980	9274066	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000768:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9273980	9273982	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=start_codon:NA12877_ch_T0000768;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9274067	9274327	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=intron:NA12877_ch_T0000768:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9274328	9274465	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=exon:NA12877_ch_T0000768:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9274328	9274465	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000768:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9274466	9275072	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=intron:NA12877_ch_T0000768:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275073	9275150	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=exon:NA12877_ch_T0000768:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9275073	9275150	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000768:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275151	9275278	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=intron:NA12877_ch_T0000768:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275279	9275390	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=exon:NA12877_ch_T0000768:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9275279	9275390	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000768:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275391	9275491	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=intron:NA12877_ch_T0000768:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275492	9275637	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=exon:NA12877_ch_T0000768:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9275492	9275637	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000768:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275638	9275743	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=intron:NA12877_ch_T0000768:4;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275744	9275825	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=exon:NA12877_ch_T0000768:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9275744	9275825	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000768:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275826	9276519	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=intron:NA12877_ch_T0000768:5;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9276520	9276542	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=exon:NA12877_ch_T0000768:6;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9276520	9276542	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=CDS:NA12877_ch_T0000768:6;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9276540	9276542	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000768;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000768;transcript_name=NA12877_ch_T0000768;gene_name=TSPY3;ID=stop_codon:NA12877_ch_T0000768;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9273980	9276737	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000769;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_G0000247;transcript_name=NA12877_ch_T0000769;gene_name=TSPY3;ID=NA12877_ch_T0000769;Name=TSPY3
NA12877_chrY	CAT	exon	9273980	9274465	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000769;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000769;transcript_name=NA12877_ch_T0000769;gene_name=TSPY3;ID=exon:NA12877_ch_T0000769:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9274466	9275072	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000769;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000769;transcript_name=NA12877_ch_T0000769;gene_name=TSPY3;ID=intron:NA12877_ch_T0000769:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275073	9275150	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000769;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000769;transcript_name=NA12877_ch_T0000769;gene_name=TSPY3;ID=exon:NA12877_ch_T0000769:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275151	9275278	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000769;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000769;transcript_name=NA12877_ch_T0000769;gene_name=TSPY3;ID=intron:NA12877_ch_T0000769:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275279	9275825	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000769;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000769;transcript_name=NA12877_ch_T0000769;gene_name=TSPY3;ID=exon:NA12877_ch_T0000769:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275826	9275952	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000769;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000769;transcript_name=NA12877_ch_T0000769;gene_name=TSPY3;ID=intron:NA12877_ch_T0000769:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275953	9276737	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000769;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000769;transcript_name=NA12877_ch_T0000769;gene_name=TSPY3;ID=exon:NA12877_ch_T0000769:3;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9275340	9276722	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000770;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_G0000247;transcript_name=NA12877_ch_T0000770;gene_name=TSPY3;ID=NA12877_ch_T0000770;Name=TSPY3
NA12877_chrY	CAT	exon	9275340	9275637	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000770;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000770;transcript_name=NA12877_ch_T0000770;gene_name=TSPY3;ID=exon:NA12877_ch_T0000770:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275638	9275732	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000770;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000770;transcript_name=NA12877_ch_T0000770;gene_name=TSPY3;ID=intron:NA12877_ch_T0000770:0;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9275733	9275825	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000770;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000770;transcript_name=NA12877_ch_T0000770;gene_name=TSPY3;ID=exon:NA12877_ch_T0000770:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9275826	9276519	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000770;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000770;transcript_name=NA12877_ch_T0000770;gene_name=TSPY3;ID=intron:NA12877_ch_T0000770:1;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9276520	9276722	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=NA12877_ch_T0000770;gene_id=NA12877_ch_G0000247;Parent=NA12877_ch_T0000770;transcript_name=NA12877_ch_T0000770;gene_name=TSPY3;ID=exon:NA12877_ch_T0000770:2;Name=TSPY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9283969	9291856	.	-	.	source_gene_common_name=FAM197Y6;source_gene=ENSG00000237802.7;gene_id=NA12877_ch_G0000248;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=NA12877_ch_G0000248;Name=FAM197Y6
NA12877_chrY	CAT	transcript	9283969	9291856	1000	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000771;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_G0000248;transcript_name=NA12877_ch_T0000771;gene_name=FAM197Y6;ID=NA12877_ch_T0000771;Name=FAM197Y6
NA12877_chrY	CAT	exon	9283969	9286097	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000771;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000771;transcript_name=NA12877_ch_T0000771;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000771:0;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9286098	9289648	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000771;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000771;transcript_name=NA12877_ch_T0000771;gene_name=FAM197Y6;ID=intron:NA12877_ch_T0000771:0;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9289649	9289734	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000771;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000771;transcript_name=NA12877_ch_T0000771;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000771:1;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9289735	9291535	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000771;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000771;transcript_name=NA12877_ch_T0000771;gene_name=FAM197Y6;ID=intron:NA12877_ch_T0000771:1;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9291536	9291645	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000771;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000771;transcript_name=NA12877_ch_T0000771;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000771:2;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9291646	9291841	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000771;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000771;transcript_name=NA12877_ch_T0000771;gene_name=FAM197Y6;ID=intron:NA12877_ch_T0000771:2;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9291842	9291856	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000771;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000771;transcript_name=NA12877_ch_T0000771;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000771:3;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9286038	9291637	1000	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000772;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_G0000248;transcript_name=NA12877_ch_T0000772;gene_name=FAM197Y6;ID=NA12877_ch_T0000772;Name=FAM197Y6
NA12877_chrY	CAT	exon	9286038	9286097	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000772;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000772;transcript_name=NA12877_ch_T0000772;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000772:0;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9286098	9289648	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000772;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000772;transcript_name=NA12877_ch_T0000772;gene_name=FAM197Y6;ID=intron:NA12877_ch_T0000772:0;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9289649	9289807	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000772;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000772;transcript_name=NA12877_ch_T0000772;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000772:1;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9289808	9291303	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000772;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000772;transcript_name=NA12877_ch_T0000772;gene_name=FAM197Y6;ID=intron:NA12877_ch_T0000772:1;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9291304	9291449	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000772;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000772;transcript_name=NA12877_ch_T0000772;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000772:2;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9291450	9291535	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000772;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000772;transcript_name=NA12877_ch_T0000772;gene_name=FAM197Y6;ID=intron:NA12877_ch_T0000772:2;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9291536	9291637	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000772;gene_id=NA12877_ch_G0000248;Parent=NA12877_ch_T0000772;transcript_name=NA12877_ch_T0000772;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000772:3;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9291304	9293296	.	-	.	source_gene_common_name=ENSG00000286173;source_gene=ENSG00000286173.1_1;gene_id=NA12877_ch_G0000249;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286173;gene_sources=liftoff;ID=NA12877_ch_G0000249;Name=ENSG00000286173
NA12877_chrY	CAT	transcript	9291304	9293296	1000	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=NA12877_ch_T0000773;gene_id=NA12877_ch_G0000249;Parent=NA12877_ch_G0000249;transcript_name=NA12877_ch_T0000773;gene_name=ENSG00000286173;ID=NA12877_ch_T0000773;Name=ENSG00000286173
NA12877_chrY	CAT	exon	9291304	9291449	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=NA12877_ch_T0000773;gene_id=NA12877_ch_G0000249;Parent=NA12877_ch_T0000773;transcript_name=NA12877_ch_T0000773;gene_name=ENSG00000286173;ID=exon:NA12877_ch_T0000773:0;Name=ENSG00000286173;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9291450	9292985	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=NA12877_ch_T0000773;gene_id=NA12877_ch_G0000249;Parent=NA12877_ch_T0000773;transcript_name=NA12877_ch_T0000773;gene_name=ENSG00000286173;ID=intron:NA12877_ch_T0000773:0;Name=ENSG00000286173;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9292986	9293296	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=NA12877_ch_T0000773;gene_id=NA12877_ch_G0000249;Parent=NA12877_ch_T0000773;transcript_name=NA12877_ch_T0000773;gene_name=ENSG00000286173;ID=exon:NA12877_ch_T0000773:1;Name=ENSG00000286173;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9294251	9297047	.	+	.	source_gene_common_name=TSPY1;source_gene=ENSG00000258992.7;gene_id=NA12877_ch_G0000250;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=NA12877_ch_G0000250;Name=TSPY1
NA12877_chrY	CAT	transcript	9294251	9297046	100	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_G0000250;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=NA12877_ch_T0000774;Name=TSPY1
NA12877_chrY	CAT	exon	9294251	9294782	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=exon:NA12877_ch_T0000774:0;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9294297	9294782	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=CDS:NA12877_ch_T0000774:0;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9294297	9294299	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=start_codon:NA12877_ch_T0000774;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9294783	9295389	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=intron:NA12877_ch_T0000774:0;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9295390	9295467	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=exon:NA12877_ch_T0000774:1;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9295390	9295467	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=CDS:NA12877_ch_T0000774:1;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9295468	9295595	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=intron:NA12877_ch_T0000774:1;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9295596	9295707	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=exon:NA12877_ch_T0000774:2;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9295596	9295707	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=CDS:NA12877_ch_T0000774:2;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9295708	9295808	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=intron:NA12877_ch_T0000774:2;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9295809	9295954	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=exon:NA12877_ch_T0000774:3;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9295809	9295954	.	+	2	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=CDS:NA12877_ch_T0000774:3;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9295955	9296049	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=intron:NA12877_ch_T0000774:3;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9296050	9296142	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=exon:NA12877_ch_T0000774:4;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9296050	9296112	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=CDS:NA12877_ch_T0000774:4;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9296110	9296112	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=stop_codon:NA12877_ch_T0000774;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9296143	9296836	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=intron:NA12877_ch_T0000774:4;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9296837	9297046	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000774;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000774;transcript_name=NA12877_ch_T0000774;gene_name=TSPY1;ID=exon:NA12877_ch_T0000774:5;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9294251	9297047	100	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_G0000250;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=NA12877_ch_T0000775;Name=TSPY1
NA12877_chrY	CAT	exon	9294251	9294782	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=exon:NA12877_ch_T0000775:0;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9294297	9294782	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=CDS:NA12877_ch_T0000775:0;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9294297	9294299	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=start_codon:NA12877_ch_T0000775;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9294783	9295389	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=intron:NA12877_ch_T0000775:0;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9295390	9295467	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=exon:NA12877_ch_T0000775:1;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9295390	9295467	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=CDS:NA12877_ch_T0000775:1;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9295468	9295595	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=intron:NA12877_ch_T0000775:1;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9295596	9295707	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=exon:NA12877_ch_T0000775:2;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9295596	9295707	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=CDS:NA12877_ch_T0000775:2;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9295708	9295808	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=intron:NA12877_ch_T0000775:2;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9295809	9295954	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=exon:NA12877_ch_T0000775:3;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9295809	9295954	.	+	2	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=CDS:NA12877_ch_T0000775:3;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9295955	9296060	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=intron:NA12877_ch_T0000775:3;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9296061	9296142	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=exon:NA12877_ch_T0000775:4;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9296061	9296142	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=CDS:NA12877_ch_T0000775:4;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9296143	9296836	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=intron:NA12877_ch_T0000775:4;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9296837	9297047	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=exon:NA12877_ch_T0000775:5;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9296837	9296859	.	+	2	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=CDS:NA12877_ch_T0000775:5;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9296857	9296859	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA12877_ch_T0000775;gene_id=NA12877_ch_G0000250;Parent=NA12877_ch_T0000775;transcript_name=NA12877_ch_T0000775;gene_name=TSPY1;ID=stop_codon:NA12877_ch_T0000775;Name=TSPY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9304296	9312166	.	-	.	source_gene_common_name=FAM197Y6;source_gene=ENSG00000237802.7;gene_id=NA12877_ch_G0000251;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=NA12877_ch_G0000251;Name=FAM197Y6
NA12877_chrY	CAT	transcript	9304296	9312166	1000	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000776;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_G0000251;transcript_name=NA12877_ch_T0000776;gene_name=FAM197Y6;ID=NA12877_ch_T0000776;Name=FAM197Y6
NA12877_chrY	CAT	exon	9304296	9306409	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000776;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000776;transcript_name=NA12877_ch_T0000776;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000776:0;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9306410	9309958	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000776;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000776;transcript_name=NA12877_ch_T0000776;gene_name=FAM197Y6;ID=intron:NA12877_ch_T0000776:0;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9309959	9310044	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000776;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000776;transcript_name=NA12877_ch_T0000776;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000776:1;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9310045	9311845	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000776;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000776;transcript_name=NA12877_ch_T0000776;gene_name=FAM197Y6;ID=intron:NA12877_ch_T0000776:1;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9311846	9311955	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000776;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000776;transcript_name=NA12877_ch_T0000776;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000776:2;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9311956	9312151	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000776;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000776;transcript_name=NA12877_ch_T0000776;gene_name=FAM197Y6;ID=intron:NA12877_ch_T0000776:2;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9312152	9312166	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000776;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000776;transcript_name=NA12877_ch_T0000776;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000776:3;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9306350	9311947	1000	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000777;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_G0000251;transcript_name=NA12877_ch_T0000777;gene_name=FAM197Y6;ID=NA12877_ch_T0000777;Name=FAM197Y6
NA12877_chrY	CAT	exon	9306350	9306409	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000777;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000777;transcript_name=NA12877_ch_T0000777;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000777:0;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9306410	9309958	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000777;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000777;transcript_name=NA12877_ch_T0000777;gene_name=FAM197Y6;ID=intron:NA12877_ch_T0000777:0;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9309959	9310117	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000777;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000777;transcript_name=NA12877_ch_T0000777;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000777:1;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9310118	9311613	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000777;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000777;transcript_name=NA12877_ch_T0000777;gene_name=FAM197Y6;ID=intron:NA12877_ch_T0000777:1;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9311614	9311759	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000777;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000777;transcript_name=NA12877_ch_T0000777;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000777:2;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9311760	9311845	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000777;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000777;transcript_name=NA12877_ch_T0000777;gene_name=FAM197Y6;ID=intron:NA12877_ch_T0000777:2;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9311846	9311947	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=NA12877_ch_T0000777;gene_id=NA12877_ch_G0000251;Parent=NA12877_ch_T0000777;transcript_name=NA12877_ch_T0000777;gene_name=FAM197Y6;ID=exon:NA12877_ch_T0000777:3;Name=FAM197Y6;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9311614	9313606	.	-	.	source_gene_common_name=ENSG00000286173;source_gene=ENSG00000286173.1;gene_id=NA12877_ch_G0000252;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286173;gene_sources=liftoff;ID=NA12877_ch_G0000252;Name=ENSG00000286173
NA12877_chrY	CAT	transcript	9311614	9313606	1000	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=NA12877_ch_T0000778;gene_id=NA12877_ch_G0000252;Parent=NA12877_ch_G0000252;transcript_name=NA12877_ch_T0000778;gene_name=ENSG00000286173;ID=NA12877_ch_T0000778;Name=ENSG00000286173
NA12877_chrY	CAT	exon	9311614	9311759	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=NA12877_ch_T0000778;gene_id=NA12877_ch_G0000252;Parent=NA12877_ch_T0000778;transcript_name=NA12877_ch_T0000778;gene_name=ENSG00000286173;ID=exon:NA12877_ch_T0000778:0;Name=ENSG00000286173;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9311760	9313295	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=NA12877_ch_T0000778;gene_id=NA12877_ch_G0000252;Parent=NA12877_ch_T0000778;transcript_name=NA12877_ch_T0000778;gene_name=ENSG00000286173;ID=intron:NA12877_ch_T0000778:0;Name=ENSG00000286173;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9313296	9313606	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=NA12877_ch_T0000778;gene_id=NA12877_ch_G0000252;Parent=NA12877_ch_T0000778;transcript_name=NA12877_ch_T0000778;gene_name=ENSG00000286173;ID=exon:NA12877_ch_T0000778:1;Name=ENSG00000286173;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9314560	9317374	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=NA12877_ch_G0000253;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=NA12877_ch_G0000253;Name=TSPY9
NA12877_chrY	CAT	transcript	9314560	9317374	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_G0000253;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=NA12877_ch_T0000779;Name=TSPY9
NA12877_chrY	CAT	exon	9314560	9315109	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=exon:NA12877_ch_T0000779:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9314606	9315109	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000779:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9314606	9314608	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=start_codon:NA12877_ch_T0000779;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9315110	9315716	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=intron:NA12877_ch_T0000779:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9315717	9315794	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=exon:NA12877_ch_T0000779:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9315717	9315794	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000779:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9315795	9315922	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=intron:NA12877_ch_T0000779:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9315923	9316034	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=exon:NA12877_ch_T0000779:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9315923	9316034	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000779:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9316035	9316135	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=intron:NA12877_ch_T0000779:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9316136	9316281	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=exon:NA12877_ch_T0000779:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9316136	9316281	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000779:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9316282	9316387	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=intron:NA12877_ch_T0000779:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9316388	9316469	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=exon:NA12877_ch_T0000779:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9316388	9316469	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000779:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9316470	9317163	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=intron:NA12877_ch_T0000779:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9317164	9317374	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=exon:NA12877_ch_T0000779:5;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9317164	9317186	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000779:5;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9317184	9317186	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000779;gene_id=NA12877_ch_G0000253;Parent=NA12877_ch_T0000779;transcript_name=NA12877_ch_T0000779;gene_name=TSPY9;ID=stop_codon:NA12877_ch_T0000779;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9326526	9332256	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=NA12877_ch_G0000254;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000254;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9326526	9332256	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000780;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_G0000254;transcript_name=NA12877_ch_T0000780;gene_name=FAM197Y5;ID=NA12877_ch_T0000780;Name=FAM197Y5
NA12877_chrY	CAT	exon	9326526	9326715	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000780;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_T0000780;transcript_name=NA12877_ch_T0000780;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000780:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9326716	9330264	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000780;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_T0000780;transcript_name=NA12877_ch_T0000780;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000780:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9330265	9330350	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000780;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_T0000780;transcript_name=NA12877_ch_T0000780;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000780:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9330351	9332142	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000780;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_T0000780;transcript_name=NA12877_ch_T0000780;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000780:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9332143	9332256	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000780;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_T0000780;transcript_name=NA12877_ch_T0000780;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000780:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9326656	9332244	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000781;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_G0000254;transcript_name=NA12877_ch_T0000781;gene_name=FAM197Y5;ID=NA12877_ch_T0000781;Name=FAM197Y5
NA12877_chrY	CAT	exon	9326656	9326715	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000781;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_T0000781;transcript_name=NA12877_ch_T0000781;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000781:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9326716	9330264	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000781;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_T0000781;transcript_name=NA12877_ch_T0000781;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000781:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9330265	9330423	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000781;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_T0000781;transcript_name=NA12877_ch_T0000781;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000781:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9330424	9331910	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000781;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_T0000781;transcript_name=NA12877_ch_T0000781;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000781:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9331911	9332056	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000781;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_T0000781;transcript_name=NA12877_ch_T0000781;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000781:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9332057	9332142	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000781;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_T0000781;transcript_name=NA12877_ch_T0000781;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000781:2;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9332143	9332244	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=NA12877_ch_T0000781;gene_id=NA12877_ch_G0000254;Parent=NA12877_ch_T0000781;transcript_name=NA12877_ch_T0000781;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000781:3;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9331911	9333903	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8;alternative_source_transcripts=ENST00000622692.2;gene_id=NA12877_ch_G0000255;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=NA12877_ch_G0000255;Name=FAM197Y5
NA12877_chrY	CAT	transcript	9331911	9333903	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000622692.2;transcript_id=NA12877_ch_T0000782;gene_id=NA12877_ch_G0000255;Parent=NA12877_ch_G0000255;transcript_name=NA12877_ch_T0000782;gene_name=FAM197Y5;ID=NA12877_ch_T0000782;Name=FAM197Y5
NA12877_chrY	CAT	exon	9331911	9332056	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000622692.2;transcript_id=NA12877_ch_T0000782;gene_id=NA12877_ch_G0000255;Parent=NA12877_ch_T0000782;transcript_name=NA12877_ch_T0000782;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000782:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9332057	9333592	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000622692.2;transcript_id=NA12877_ch_T0000782;gene_id=NA12877_ch_G0000255;Parent=NA12877_ch_T0000782;transcript_name=NA12877_ch_T0000782;gene_name=FAM197Y5;ID=intron:NA12877_ch_T0000782:0;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9333593	9333903	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000622692.2;transcript_id=NA12877_ch_T0000782;gene_id=NA12877_ch_G0000255;Parent=NA12877_ch_T0000782;transcript_name=NA12877_ch_T0000782;gene_name=FAM197Y5;ID=exon:NA12877_ch_T0000782:1;Name=FAM197Y5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9334897	9337683	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=NA12877_ch_G0000256;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=NA12877_ch_G0000256;Name=ENSG00000293749
NA12877_chrY	CAT	transcript	9334897	9337683	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_G0000256;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=NA12877_ch_T0000783;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9334897	9334989	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000783:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9334990	9335268	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000783:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9335269	9335406	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000783:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9335407	9336013	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000783:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336014	9336091	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000783:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336092	9336219	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000783:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336220	9336331	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000783:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336332	9336432	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000783:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336433	9336578	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000783:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336579	9336684	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000783:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336685	9336766	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000783:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336767	9337460	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000783:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9337461	9337683	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000783;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000783;transcript_name=NA12877_ch_T0000783;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000783:6;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9334909	9337671	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_G0000256;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=NA12877_ch_T0000785;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9334909	9334989	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000785:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9334990	9335268	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000785:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9335269	9335406	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000785:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9335407	9336013	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000785:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336014	9336091	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000785:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336092	9336219	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000785:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336220	9336331	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000785:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336332	9336439	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000785:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336440	9336578	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000785:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336579	9336684	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000785:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336685	9336766	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000785:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336767	9337460	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000785:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9337461	9337671	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000785;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000785;transcript_name=NA12877_ch_T0000785;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000785:6;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9334918	9337678	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_G0000256;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=NA12877_ch_T0000786;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9334918	9334989	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000786:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9334990	9335268	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000786:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9335269	9335406	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000786:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9335407	9336013	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000786:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336014	9336091	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000786:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336092	9336219	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000786:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336220	9336331	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000786:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336332	9336432	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000786:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336433	9336578	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000786:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336579	9336673	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000786:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336674	9336766	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000786:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336767	9337460	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000786:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9337461	9337678	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000786;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000786;transcript_name=NA12877_ch_T0000786;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000786:6;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9335138	9337676	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000787;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_G0000256;transcript_name=NA12877_ch_T0000787;gene_name=ENSG00000293749;ID=NA12877_ch_T0000787;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9335138	9335406	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000787;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000787;transcript_name=NA12877_ch_T0000787;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000787:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9335407	9336013	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000787;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000787;transcript_name=NA12877_ch_T0000787;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000787:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336014	9336091	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000787;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000787;transcript_name=NA12877_ch_T0000787;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000787:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336092	9336219	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000787;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000787;transcript_name=NA12877_ch_T0000787;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000787:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336220	9336331	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000787;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000787;transcript_name=NA12877_ch_T0000787;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000787:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336332	9336432	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000787;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000787;transcript_name=NA12877_ch_T0000787;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000787:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336433	9336578	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000787;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000787;transcript_name=NA12877_ch_T0000787;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000787:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336579	9336684	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000787;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000787;transcript_name=NA12877_ch_T0000787;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000787:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336685	9336766	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000787;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000787;transcript_name=NA12877_ch_T0000787;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000787:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336767	9337460	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000787;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000787;transcript_name=NA12877_ch_T0000787;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000787:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9337461	9337676	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000787;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000787;transcript_name=NA12877_ch_T0000787;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000787:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9335234	9337671	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000788;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_G0000256;transcript_name=NA12877_ch_T0000788;gene_name=ENSG00000293749;ID=NA12877_ch_T0000788;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9335234	9335406	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000788;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000788;transcript_name=NA12877_ch_T0000788;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000788:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9335407	9336013	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000788;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000788;transcript_name=NA12877_ch_T0000788;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000788:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336014	9336091	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000788;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000788;transcript_name=NA12877_ch_T0000788;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000788:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336092	9336219	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000788;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000788;transcript_name=NA12877_ch_T0000788;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000788:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336220	9336331	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000788;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000788;transcript_name=NA12877_ch_T0000788;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000788:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336332	9336439	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000788;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000788;transcript_name=NA12877_ch_T0000788;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000788:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336440	9336578	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000788;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000788;transcript_name=NA12877_ch_T0000788;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000788:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336579	9336684	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000788;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000788;transcript_name=NA12877_ch_T0000788;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000788:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336685	9336766	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000788;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000788;transcript_name=NA12877_ch_T0000788;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000788:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336767	9337460	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000788;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000788;transcript_name=NA12877_ch_T0000788;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000788:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9337461	9337671	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000788;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000788;transcript_name=NA12877_ch_T0000788;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000788:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9335360	9337682	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000789;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_G0000256;transcript_name=NA12877_ch_T0000789;gene_name=ENSG00000293749;ID=NA12877_ch_T0000789;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9335360	9335462	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000789;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000789;transcript_name=NA12877_ch_T0000789;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000789:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9335463	9336031	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000789;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000789;transcript_name=NA12877_ch_T0000789;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000789:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336032	9336091	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000789;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000789;transcript_name=NA12877_ch_T0000789;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000789:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336092	9336219	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000789;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000789;transcript_name=NA12877_ch_T0000789;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000789:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336220	9336331	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000789;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000789;transcript_name=NA12877_ch_T0000789;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000789:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336332	9336432	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000789;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000789;transcript_name=NA12877_ch_T0000789;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000789:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336433	9336578	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000789;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000789;transcript_name=NA12877_ch_T0000789;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000789:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336579	9336684	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000789;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000789;transcript_name=NA12877_ch_T0000789;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000789:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336685	9336766	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000789;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000789;transcript_name=NA12877_ch_T0000789;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000789:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336767	9337460	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000789;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000789;transcript_name=NA12877_ch_T0000789;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000789:4;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9337461	9337682	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000789;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000789;transcript_name=NA12877_ch_T0000789;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000789:5;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9336061	9337669	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000790;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_G0000256;transcript_name=NA12877_ch_T0000790;gene_name=ENSG00000293749;ID=NA12877_ch_T0000790;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9336061	9336091	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000790;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000790;transcript_name=NA12877_ch_T0000790;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000790:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336092	9336219	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000790;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000790;transcript_name=NA12877_ch_T0000790;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000790:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336220	9336578	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000790;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000790;transcript_name=NA12877_ch_T0000790;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000790:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336579	9336684	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000790;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000790;transcript_name=NA12877_ch_T0000790;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000790:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336685	9336766	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000790;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000790;transcript_name=NA12877_ch_T0000790;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000790:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336767	9337460	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000790;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000790;transcript_name=NA12877_ch_T0000790;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000790:2;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9337461	9337669	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000790;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000790;transcript_name=NA12877_ch_T0000790;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000790:3;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9336606	9337678	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000791;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_G0000256;transcript_name=NA12877_ch_T0000791;gene_name=ENSG00000293749;ID=NA12877_ch_T0000791;Name=ENSG00000293749
NA12877_chrY	CAT	exon	9336606	9336766	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000791;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000791;transcript_name=NA12877_ch_T0000791;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000791:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336767	9337460	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000791;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000791;transcript_name=NA12877_ch_T0000791;gene_name=ENSG00000293749;ID=intron:NA12877_ch_T0000791:0;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9337461	9337678	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=NA12877_ch_T0000791;gene_id=NA12877_ch_G0000256;Parent=NA12877_ch_T0000791;transcript_name=NA12877_ch_T0000791;gene_name=ENSG00000293749;ID=exon:NA12877_ch_T0000791:1;Name=ENSG00000293749;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9334903	9337483	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1;gene_id=NA12877_ch_G0000257;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=NA12877_ch_G0000257;Name=TSPY6P
NA12877_chrY	CAT	transcript	9334903	9337483	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_G0000257;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=NA12877_ch_T0000784;Name=TSPY6P
NA12877_chrY	CAT	exon	9334903	9335121	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000784:0;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9335122	9335139	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000784:0;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9335140	9335406	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000784:1;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9335407	9336013	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000784:1;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336014	9336091	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000784:2;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336092	9336219	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000784:2;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336220	9336331	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000784:3;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336332	9336432	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000784:3;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336433	9336578	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000784:4;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336579	9336684	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000784:4;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9336685	9336766	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000784:5;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9336767	9337460	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=intron:NA12877_ch_T0000784:5;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9337461	9337483	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=NA12877_ch_T0000784;gene_id=NA12877_ch_G0000257;Parent=NA12877_ch_T0000784;transcript_name=NA12877_ch_T0000784;gene_name=TSPY6P;ID=exon:NA12877_ch_T0000784:6;Name=TSPY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9344875	9352736	.	-	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000290607.1;gene_id=NA12877_ch_G0000258;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA12877_ch_G0000258;Name=FAM197Y3
NA12877_chrY	CAT	transcript	9344875	9352736	1000	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000792;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_G0000258;transcript_name=NA12877_ch_T0000792;gene_name=FAM197Y3;ID=NA12877_ch_T0000792;Name=FAM197Y3
NA12877_chrY	CAT	exon	9344875	9346988	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000792;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000792;transcript_name=NA12877_ch_T0000792;gene_name=FAM197Y3;ID=exon:NA12877_ch_T0000792:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9346989	9350537	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000792;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000792;transcript_name=NA12877_ch_T0000792;gene_name=FAM197Y3;ID=intron:NA12877_ch_T0000792:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9350538	9350623	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000792;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000792;transcript_name=NA12877_ch_T0000792;gene_name=FAM197Y3;ID=exon:NA12877_ch_T0000792:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9350624	9352415	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000792;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000792;transcript_name=NA12877_ch_T0000792;gene_name=FAM197Y3;ID=intron:NA12877_ch_T0000792:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9352416	9352525	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000792;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000792;transcript_name=NA12877_ch_T0000792;gene_name=FAM197Y3;ID=exon:NA12877_ch_T0000792:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9352526	9352721	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000792;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000792;transcript_name=NA12877_ch_T0000792;gene_name=FAM197Y3;ID=intron:NA12877_ch_T0000792:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9352722	9352736	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000792;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000792;transcript_name=NA12877_ch_T0000792;gene_name=FAM197Y3;ID=exon:NA12877_ch_T0000792:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9346929	9352517	1000	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000793;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_G0000258;transcript_name=NA12877_ch_T0000793;gene_name=FAM197Y3;ID=NA12877_ch_T0000793;Name=FAM197Y3
NA12877_chrY	CAT	exon	9346929	9346988	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000793;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000793;transcript_name=NA12877_ch_T0000793;gene_name=FAM197Y3;ID=exon:NA12877_ch_T0000793:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9346989	9350537	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000793;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000793;transcript_name=NA12877_ch_T0000793;gene_name=FAM197Y3;ID=intron:NA12877_ch_T0000793:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9350538	9350696	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000793;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000793;transcript_name=NA12877_ch_T0000793;gene_name=FAM197Y3;ID=exon:NA12877_ch_T0000793:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9350697	9352183	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000793;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000793;transcript_name=NA12877_ch_T0000793;gene_name=FAM197Y3;ID=intron:NA12877_ch_T0000793:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9352184	9352329	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000793;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000793;transcript_name=NA12877_ch_T0000793;gene_name=FAM197Y3;ID=exon:NA12877_ch_T0000793:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9352330	9352415	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000793;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000793;transcript_name=NA12877_ch_T0000793;gene_name=FAM197Y3;ID=intron:NA12877_ch_T0000793:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9352416	9352517	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000793;gene_id=NA12877_ch_G0000258;Parent=NA12877_ch_T0000793;transcript_name=NA12877_ch_T0000793;gene_name=FAM197Y3;ID=exon:NA12877_ch_T0000793:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9352184	9354176	.	-	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000230066.7;gene_id=NA12877_ch_G0000259;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA12877_ch_G0000259;Name=FAM197Y3
NA12877_chrY	CAT	transcript	9352184	9354176	1000	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000794;gene_id=NA12877_ch_G0000259;Parent=NA12877_ch_G0000259;transcript_name=NA12877_ch_T0000794;gene_name=FAM197Y3;ID=NA12877_ch_T0000794;Name=FAM197Y3
NA12877_chrY	CAT	exon	9352184	9352329	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000794;gene_id=NA12877_ch_G0000259;Parent=NA12877_ch_T0000794;transcript_name=NA12877_ch_T0000794;gene_name=FAM197Y3;ID=exon:NA12877_ch_T0000794:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9352330	9353865	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000794;gene_id=NA12877_ch_G0000259;Parent=NA12877_ch_T0000794;transcript_name=NA12877_ch_T0000794;gene_name=FAM197Y3;ID=intron:NA12877_ch_T0000794:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9353866	9354176	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA12877_ch_T0000794;gene_id=NA12877_ch_G0000259;Parent=NA12877_ch_T0000794;transcript_name=NA12877_ch_T0000794;gene_name=FAM197Y3;ID=exon:NA12877_ch_T0000794:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9355130	9357944	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=NA12877_ch_G0000260;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=NA12877_ch_G0000260;Name=TSPY9
NA12877_chrY	CAT	transcript	9355130	9357944	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_G0000260;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=NA12877_ch_T0000795;Name=TSPY9
NA12877_chrY	CAT	exon	9355130	9355679	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=exon:NA12877_ch_T0000795:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9355176	9355679	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000795:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9355176	9355178	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=start_codon:NA12877_ch_T0000795;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9355680	9356286	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=intron:NA12877_ch_T0000795:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9356287	9356364	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=exon:NA12877_ch_T0000795:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9356287	9356364	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000795:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9356365	9356492	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=intron:NA12877_ch_T0000795:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9356493	9356604	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=exon:NA12877_ch_T0000795:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9356493	9356604	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000795:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9356605	9356705	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=intron:NA12877_ch_T0000795:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9356706	9356851	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=exon:NA12877_ch_T0000795:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9356706	9356851	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000795:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9356852	9356957	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=intron:NA12877_ch_T0000795:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9356958	9357039	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=exon:NA12877_ch_T0000795:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9356958	9357039	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000795:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9357040	9357733	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=intron:NA12877_ch_T0000795:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9357734	9357944	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=exon:NA12877_ch_T0000795:5;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9357734	9357756	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000795:5;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9357754	9357756	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=NA12877_ch_T0000795;gene_id=NA12877_ch_G0000260;Parent=NA12877_ch_T0000795;transcript_name=NA12877_ch_T0000795;gene_name=TSPY9;ID=stop_codon:NA12877_ch_T0000795;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9365147	9373037	.	-	.	source_gene_common_name=ENSG00000290332;source_gene=ENSG00000290332.1;gene_id=NA12877_ch_G0000261;gene_biotype=lncRNA;gene_name=ENSG00000290332;gene_sources=liftoff;ID=NA12877_ch_G0000261;Name=ENSG00000290332
NA12877_chrY	CAT	transcript	9365147	9373037	1000	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000796;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_G0000261;transcript_name=NA12877_ch_T0000796;gene_name=ENSG00000290332;ID=NA12877_ch_T0000796;Name=ENSG00000290332
NA12877_chrY	CAT	exon	9365147	9367273	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000796;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000796;transcript_name=NA12877_ch_T0000796;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000796:0;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9367274	9370823	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000796;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000796;transcript_name=NA12877_ch_T0000796;gene_name=ENSG00000290332;ID=intron:NA12877_ch_T0000796:0;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9370824	9370909	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000796;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000796;transcript_name=NA12877_ch_T0000796;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000796:1;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9370910	9372716	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000796;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000796;transcript_name=NA12877_ch_T0000796;gene_name=ENSG00000290332;ID=intron:NA12877_ch_T0000796:1;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9372717	9372826	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000796;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000796;transcript_name=NA12877_ch_T0000796;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000796:2;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9372827	9373022	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000796;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000796;transcript_name=NA12877_ch_T0000796;gene_name=ENSG00000290332;ID=intron:NA12877_ch_T0000796:2;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9373023	9373037	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000796;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000796;transcript_name=NA12877_ch_T0000796;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000796:3;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9367214	9372818	1000	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000797;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_G0000261;transcript_name=NA12877_ch_T0000797;gene_name=ENSG00000290332;ID=NA12877_ch_T0000797;Name=ENSG00000290332
NA12877_chrY	CAT	exon	9367214	9367273	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000797;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000797;transcript_name=NA12877_ch_T0000797;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000797:0;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9367274	9370823	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000797;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000797;transcript_name=NA12877_ch_T0000797;gene_name=ENSG00000290332;ID=intron:NA12877_ch_T0000797:0;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9370824	9370982	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000797;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000797;transcript_name=NA12877_ch_T0000797;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000797:1;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9370983	9372484	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000797;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000797;transcript_name=NA12877_ch_T0000797;gene_name=ENSG00000290332;ID=intron:NA12877_ch_T0000797:1;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9372485	9372630	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000797;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000797;transcript_name=NA12877_ch_T0000797;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000797:2;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9372631	9372716	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000797;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000797;transcript_name=NA12877_ch_T0000797;gene_name=ENSG00000290332;ID=intron:NA12877_ch_T0000797:2;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9372717	9372818	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=NA12877_ch_T0000797;gene_id=NA12877_ch_G0000261;Parent=NA12877_ch_T0000797;transcript_name=NA12877_ch_T0000797;gene_name=ENSG00000290332;ID=exon:NA12877_ch_T0000797:3;Name=ENSG00000290332;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9372485	9374477	.	-	.	source_gene_common_name=FAM197Y2;source_gene=ENSG00000234803.9;gene_id=NA12877_ch_G0000262;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA12877_ch_G0000262;Name=FAM197Y2
NA12877_chrY	CAT	transcript	9372485	9374477	1000	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA12877_ch_T0000798;gene_id=NA12877_ch_G0000262;Parent=NA12877_ch_G0000262;transcript_name=NA12877_ch_T0000798;gene_name=FAM197Y2;ID=NA12877_ch_T0000798;Name=FAM197Y2
NA12877_chrY	CAT	exon	9372485	9372630	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA12877_ch_T0000798;gene_id=NA12877_ch_G0000262;Parent=NA12877_ch_T0000798;transcript_name=NA12877_ch_T0000798;gene_name=FAM197Y2;ID=exon:NA12877_ch_T0000798:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9372631	9374166	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA12877_ch_T0000798;gene_id=NA12877_ch_G0000262;Parent=NA12877_ch_T0000798;transcript_name=NA12877_ch_T0000798;gene_name=FAM197Y2;ID=intron:NA12877_ch_T0000798:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9374167	9374477	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA12877_ch_T0000798;gene_id=NA12877_ch_G0000262;Parent=NA12877_ch_T0000798;transcript_name=NA12877_ch_T0000798;gene_name=FAM197Y2;ID=exon:NA12877_ch_T0000798:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9375431	9378243	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;alternative_source_transcripts=ENST00000428845.6;gene_id=NA12877_ch_G0000263;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=NA12877_ch_G0000263;Name=TSPY9
NA12877_chrY	CAT	transcript	9375431	9378243	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_G0000263;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=NA12877_ch_T0000799;Name=TSPY9
NA12877_chrY	CAT	exon	9375431	9375980	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=exon:NA12877_ch_T0000799:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9375477	9375980	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000799:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	9375477	9375479	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=start_codon:NA12877_ch_T0000799;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9375981	9376587	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=intron:NA12877_ch_T0000799:0;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9376588	9376665	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=exon:NA12877_ch_T0000799:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9376588	9376665	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000799:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9376666	9376793	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=intron:NA12877_ch_T0000799:1;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9376794	9376905	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=exon:NA12877_ch_T0000799:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9376794	9376905	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000799:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9376906	9377006	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=intron:NA12877_ch_T0000799:2;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9377007	9377152	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=exon:NA12877_ch_T0000799:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9377007	9377152	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000799:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9377153	9377258	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=intron:NA12877_ch_T0000799:3;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9377259	9377340	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=exon:NA12877_ch_T0000799:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9377259	9377340	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000799:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9377341	9378032	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=intron:NA12877_ch_T0000799:4;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9378033	9378243	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=exon:NA12877_ch_T0000799:5;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	9378033	9378055	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=CDS:NA12877_ch_T0000799:5;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	9378053	9378055	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=ENST00000428845.6;transcript_id=NA12877_ch_T0000799;gene_id=NA12877_ch_G0000263;Parent=NA12877_ch_T0000799;transcript_name=NA12877_ch_T0000799;gene_name=TSPY9;ID=stop_codon:NA12877_ch_T0000799;Name=TSPY9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9392493	9394723	.	-	.	source_gene_common_name=FAM197Y1;source_gene=ENSG00000224336.2;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;gene_id=NA12877_ch_G0000264;gene_biotype=unprocessed_pseudogene;gene_name=FAM197Y1;gene_sources=liftoff;ID=NA12877_ch_G0000264;Name=FAM197Y1
NA12877_chrY	CAT	transcript	9392493	9394723	1000	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=NA12877_ch_T0000800;gene_id=NA12877_ch_G0000264;Parent=NA12877_ch_G0000264;transcript_name=NA12877_ch_T0000800;gene_name=FAM197Y1;ID=NA12877_ch_T0000800;Name=FAM197Y1
NA12877_chrY	CAT	exon	9392493	9392582	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=NA12877_ch_T0000800;gene_id=NA12877_ch_G0000264;Parent=NA12877_ch_T0000800;transcript_name=NA12877_ch_T0000800;gene_name=FAM197Y1;ID=exon:NA12877_ch_T0000800:0;Name=FAM197Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9392583	9392700	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=NA12877_ch_T0000800;gene_id=NA12877_ch_G0000264;Parent=NA12877_ch_T0000800;transcript_name=NA12877_ch_T0000800;gene_name=FAM197Y1;ID=intron:NA12877_ch_T0000800:0;Name=FAM197Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9392701	9392846	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=NA12877_ch_T0000800;gene_id=NA12877_ch_G0000264;Parent=NA12877_ch_T0000800;transcript_name=NA12877_ch_T0000800;gene_name=FAM197Y1;ID=exon:NA12877_ch_T0000800:1;Name=FAM197Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9392847	9392932	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=NA12877_ch_T0000800;gene_id=NA12877_ch_G0000264;Parent=NA12877_ch_T0000800;transcript_name=NA12877_ch_T0000800;gene_name=FAM197Y1;ID=intron:NA12877_ch_T0000800:1;Name=FAM197Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9392933	9393042	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=NA12877_ch_T0000800;gene_id=NA12877_ch_G0000264;Parent=NA12877_ch_T0000800;transcript_name=NA12877_ch_T0000800;gene_name=FAM197Y1;ID=exon:NA12877_ch_T0000800:2;Name=FAM197Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9393043	9393238	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=NA12877_ch_T0000800;gene_id=NA12877_ch_G0000264;Parent=NA12877_ch_T0000800;transcript_name=NA12877_ch_T0000800;gene_name=FAM197Y1;ID=intron:NA12877_ch_T0000800:2;Name=FAM197Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9393239	9393300	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=NA12877_ch_T0000800;gene_id=NA12877_ch_G0000264;Parent=NA12877_ch_T0000800;transcript_name=NA12877_ch_T0000800;gene_name=FAM197Y1;ID=exon:NA12877_ch_T0000800:3;Name=FAM197Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9393301	9394367	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=NA12877_ch_T0000800;gene_id=NA12877_ch_G0000264;Parent=NA12877_ch_T0000800;transcript_name=NA12877_ch_T0000800;gene_name=FAM197Y1;ID=intron:NA12877_ch_T0000800:3;Name=FAM197Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9394368	9394723	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=NA12877_ch_T0000800;gene_id=NA12877_ch_G0000264;Parent=NA12877_ch_T0000800;transcript_name=NA12877_ch_T0000800;gene_name=FAM197Y1;ID=exon:NA12877_ch_T0000800:4;Name=FAM197Y1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9395684	9398256	.	+	.	source_gene_common_name=TSPY15P;source_gene=ENSG00000236786.1;gene_id=NA12877_ch_G0000265;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY15P;gene_sources=liftoff;ID=NA12877_ch_G0000265;Name=TSPY15P
NA12877_chrY	CAT	transcript	9395684	9398256	1000	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=NA12877_ch_T0000801;gene_id=NA12877_ch_G0000265;Parent=NA12877_ch_G0000265;transcript_name=NA12877_ch_T0000801;gene_name=TSPY15P;ID=NA12877_ch_T0000801;Name=TSPY15P
NA12877_chrY	CAT	exon	9395684	9396155	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=NA12877_ch_T0000801;gene_id=NA12877_ch_G0000265;Parent=NA12877_ch_T0000801;transcript_name=NA12877_ch_T0000801;gene_name=TSPY15P;ID=exon:NA12877_ch_T0000801:0;Name=TSPY15P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9396156	9396762	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=NA12877_ch_T0000801;gene_id=NA12877_ch_G0000265;Parent=NA12877_ch_T0000801;transcript_name=NA12877_ch_T0000801;gene_name=TSPY15P;ID=intron:NA12877_ch_T0000801:0;Name=TSPY15P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9396763	9396840	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=NA12877_ch_T0000801;gene_id=NA12877_ch_G0000265;Parent=NA12877_ch_T0000801;transcript_name=NA12877_ch_T0000801;gene_name=TSPY15P;ID=exon:NA12877_ch_T0000801:1;Name=TSPY15P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9396841	9396968	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=NA12877_ch_T0000801;gene_id=NA12877_ch_G0000265;Parent=NA12877_ch_T0000801;transcript_name=NA12877_ch_T0000801;gene_name=TSPY15P;ID=intron:NA12877_ch_T0000801:1;Name=TSPY15P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9396969	9397080	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=NA12877_ch_T0000801;gene_id=NA12877_ch_G0000265;Parent=NA12877_ch_T0000801;transcript_name=NA12877_ch_T0000801;gene_name=TSPY15P;ID=exon:NA12877_ch_T0000801:2;Name=TSPY15P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9397081	9397181	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=NA12877_ch_T0000801;gene_id=NA12877_ch_G0000265;Parent=NA12877_ch_T0000801;transcript_name=NA12877_ch_T0000801;gene_name=TSPY15P;ID=intron:NA12877_ch_T0000801:2;Name=TSPY15P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9397182	9397326	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=NA12877_ch_T0000801;gene_id=NA12877_ch_G0000265;Parent=NA12877_ch_T0000801;transcript_name=NA12877_ch_T0000801;gene_name=TSPY15P;ID=exon:NA12877_ch_T0000801:3;Name=TSPY15P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9397327	9397421	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=NA12877_ch_T0000801;gene_id=NA12877_ch_G0000265;Parent=NA12877_ch_T0000801;transcript_name=NA12877_ch_T0000801;gene_name=TSPY15P;ID=intron:NA12877_ch_T0000801:3;Name=TSPY15P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9397422	9397514	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=NA12877_ch_T0000801;gene_id=NA12877_ch_G0000265;Parent=NA12877_ch_T0000801;transcript_name=NA12877_ch_T0000801;gene_name=TSPY15P;ID=exon:NA12877_ch_T0000801:4;Name=TSPY15P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9397515	9398234	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=NA12877_ch_T0000801;gene_id=NA12877_ch_G0000265;Parent=NA12877_ch_T0000801;transcript_name=NA12877_ch_T0000801;gene_name=TSPY15P;ID=intron:NA12877_ch_T0000801:4;Name=TSPY15P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9398235	9398256	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=NA12877_ch_T0000801;gene_id=NA12877_ch_G0000265;Parent=NA12877_ch_T0000801;transcript_name=NA12877_ch_T0000801;gene_name=TSPY15P;ID=exon:NA12877_ch_T0000801:5;Name=TSPY15P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9395688	9398455	.	+	.	source_gene_common_name=ENSG00000308528;source_gene=ENSG00000308528.1;gene_id=NA12877_ch_G0000266;gene_biotype=lncRNA;gene_name=ENSG00000308528;gene_sources=liftoff;ID=NA12877_ch_G0000266;Name=ENSG00000308528
NA12877_chrY	CAT	transcript	9395688	9398455	1000	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000802;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_G0000266;transcript_name=NA12877_ch_T0000802;gene_name=ENSG00000308528;ID=NA12877_ch_T0000802;Name=ENSG00000308528
NA12877_chrY	CAT	exon	9395688	9396155	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000802;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000802;transcript_name=NA12877_ch_T0000802;gene_name=ENSG00000308528;ID=exon:NA12877_ch_T0000802:0;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9396156	9396762	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000802;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000802;transcript_name=NA12877_ch_T0000802;gene_name=ENSG00000308528;ID=intron:NA12877_ch_T0000802:0;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9396763	9396840	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000802;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000802;transcript_name=NA12877_ch_T0000802;gene_name=ENSG00000308528;ID=exon:NA12877_ch_T0000802:1;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9396841	9396968	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000802;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000802;transcript_name=NA12877_ch_T0000802;gene_name=ENSG00000308528;ID=intron:NA12877_ch_T0000802:1;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9396969	9397080	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000802;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000802;transcript_name=NA12877_ch_T0000802;gene_name=ENSG00000308528;ID=exon:NA12877_ch_T0000802:2;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9397081	9397181	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000802;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000802;transcript_name=NA12877_ch_T0000802;gene_name=ENSG00000308528;ID=intron:NA12877_ch_T0000802:2;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9397182	9397326	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000802;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000802;transcript_name=NA12877_ch_T0000802;gene_name=ENSG00000308528;ID=exon:NA12877_ch_T0000802:3;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9397327	9397432	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000802;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000802;transcript_name=NA12877_ch_T0000802;gene_name=ENSG00000308528;ID=intron:NA12877_ch_T0000802:3;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9397433	9397514	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000802;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000802;transcript_name=NA12877_ch_T0000802;gene_name=ENSG00000308528;ID=exon:NA12877_ch_T0000802:4;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9397515	9398210	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000802;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000802;transcript_name=NA12877_ch_T0000802;gene_name=ENSG00000308528;ID=intron:NA12877_ch_T0000802:4;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9398211	9398455	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000802;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000802;transcript_name=NA12877_ch_T0000802;gene_name=ENSG00000308528;ID=exon:NA12877_ch_T0000802:5;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9397441	9398448	1000	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000803;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_G0000266;transcript_name=NA12877_ch_T0000803;gene_name=ENSG00000308528;ID=NA12877_ch_T0000803;Name=ENSG00000308528
NA12877_chrY	CAT	exon	9397441	9397514	.	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000803;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000803;transcript_name=NA12877_ch_T0000803;gene_name=ENSG00000308528;ID=exon:NA12877_ch_T0000803:0;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9397515	9398210	.	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000803;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000803;transcript_name=NA12877_ch_T0000803;gene_name=ENSG00000308528;ID=intron:NA12877_ch_T0000803:0;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9398211	9398448	.	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=NA12877_ch_T0000803;gene_id=NA12877_ch_G0000266;Parent=NA12877_ch_T0000803;transcript_name=NA12877_ch_T0000803;gene_name=ENSG00000308528;ID=exon:NA12877_ch_T0000803:1;Name=ENSG00000308528;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9457532	9479922	.	-	.	source_gene_common_name=ENSG00000309329;source_gene=ENSG00000309329.1;gene_id=NA12877_ch_G0000267;gene_biotype=lncRNA;gene_name=ENSG00000309329;gene_sources=liftoff;ID=NA12877_ch_G0000267;Name=ENSG00000309329
NA12877_chrY	CAT	transcript	9457532	9470892	1000	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000804;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_G0000267;transcript_name=NA12877_ch_T0000804;gene_name=ENSG00000309329;ID=NA12877_ch_T0000804;Name=ENSG00000309329
NA12877_chrY	CAT	exon	9457532	9458447	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000804;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000804;transcript_name=NA12877_ch_T0000804;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000804:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9458448	9462357	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000804;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000804;transcript_name=NA12877_ch_T0000804;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000804:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462358	9462459	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000804;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000804;transcript_name=NA12877_ch_T0000804;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000804:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462460	9462665	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000804;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000804;transcript_name=NA12877_ch_T0000804;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000804:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462666	9462769	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000804;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000804;transcript_name=NA12877_ch_T0000804;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000804:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462770	9468202	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000804;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000804;transcript_name=NA12877_ch_T0000804;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000804:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9468203	9468292	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000804;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000804;transcript_name=NA12877_ch_T0000804;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000804:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9468293	9470730	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000804;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000804;transcript_name=NA12877_ch_T0000804;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000804:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9470731	9470892	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000804;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000804;transcript_name=NA12877_ch_T0000804;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000804:4;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9457534	9470892	1000	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000805;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_G0000267;transcript_name=NA12877_ch_T0000805;gene_name=ENSG00000309329;ID=NA12877_ch_T0000805;Name=ENSG00000309329
NA12877_chrY	CAT	exon	9457534	9458447	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000805;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000805;transcript_name=NA12877_ch_T0000805;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000805:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9458448	9459996	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000805;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000805;transcript_name=NA12877_ch_T0000805;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000805:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9459997	9460110	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000805;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000805;transcript_name=NA12877_ch_T0000805;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000805:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9460111	9462357	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000805;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000805;transcript_name=NA12877_ch_T0000805;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000805:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462358	9462459	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000805;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000805;transcript_name=NA12877_ch_T0000805;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000805:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462460	9462665	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000805;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000805;transcript_name=NA12877_ch_T0000805;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000805:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462666	9462769	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000805;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000805;transcript_name=NA12877_ch_T0000805;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000805:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462770	9468202	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000805;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000805;transcript_name=NA12877_ch_T0000805;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000805:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9468203	9468292	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000805;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000805;transcript_name=NA12877_ch_T0000805;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000805:4;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9468293	9470730	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000805;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000805;transcript_name=NA12877_ch_T0000805;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000805:4;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9470731	9470892	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000805;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000805;transcript_name=NA12877_ch_T0000805;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000805:5;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9457535	9470892	1000	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000806;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_G0000267;transcript_name=NA12877_ch_T0000806;gene_name=ENSG00000309329;ID=NA12877_ch_T0000806;Name=ENSG00000309329
NA12877_chrY	CAT	exon	9457535	9458447	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000806;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000806;transcript_name=NA12877_ch_T0000806;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000806:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9458448	9462357	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000806;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000806;transcript_name=NA12877_ch_T0000806;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000806:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462358	9462459	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000806;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000806;transcript_name=NA12877_ch_T0000806;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000806:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462460	9468202	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000806;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000806;transcript_name=NA12877_ch_T0000806;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000806:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9468203	9468292	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000806;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000806;transcript_name=NA12877_ch_T0000806;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000806:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9468293	9470730	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000806;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000806;transcript_name=NA12877_ch_T0000806;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000806:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9470731	9470892	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000806;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000806;transcript_name=NA12877_ch_T0000806;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000806:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9457867	9470876	1000	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000807;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_G0000267;transcript_name=NA12877_ch_T0000807;gene_name=ENSG00000309329;ID=NA12877_ch_T0000807;Name=ENSG00000309329
NA12877_chrY	CAT	exon	9457867	9458447	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000807;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000807;transcript_name=NA12877_ch_T0000807;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000807:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9458448	9459996	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000807;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000807;transcript_name=NA12877_ch_T0000807;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000807:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9459997	9460110	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000807;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000807;transcript_name=NA12877_ch_T0000807;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000807:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9460111	9462357	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000807;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000807;transcript_name=NA12877_ch_T0000807;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000807:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462358	9462459	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000807;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000807;transcript_name=NA12877_ch_T0000807;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000807:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462460	9462665	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000807;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000807;transcript_name=NA12877_ch_T0000807;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000807:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462666	9462778	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000807;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000807;transcript_name=NA12877_ch_T0000807;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000807:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462779	9468202	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000807;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000807;transcript_name=NA12877_ch_T0000807;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000807:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9468203	9468292	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000807;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000807;transcript_name=NA12877_ch_T0000807;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000807:4;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9468293	9470730	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000807;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000807;transcript_name=NA12877_ch_T0000807;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000807:4;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9470731	9470876	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000807;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000807;transcript_name=NA12877_ch_T0000807;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000807:5;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9457867	9470892	1000	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000808;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_G0000267;transcript_name=NA12877_ch_T0000808;gene_name=ENSG00000309329;ID=NA12877_ch_T0000808;Name=ENSG00000309329
NA12877_chrY	CAT	exon	9457867	9458447	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000808;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000808;transcript_name=NA12877_ch_T0000808;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000808:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9458448	9459996	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000808;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000808;transcript_name=NA12877_ch_T0000808;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000808:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9459997	9460110	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000808;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000808;transcript_name=NA12877_ch_T0000808;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000808:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9460111	9462357	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000808;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000808;transcript_name=NA12877_ch_T0000808;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000808:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462358	9462459	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000808;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000808;transcript_name=NA12877_ch_T0000808;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000808:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462460	9468202	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000808;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000808;transcript_name=NA12877_ch_T0000808;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000808:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9468203	9468292	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000808;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000808;transcript_name=NA12877_ch_T0000808;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000808:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9468293	9470730	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000808;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000808;transcript_name=NA12877_ch_T0000808;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000808:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9470731	9470892	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000808;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000808;transcript_name=NA12877_ch_T0000808;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000808:4;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9457874	9470881	1000	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000809;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_G0000267;transcript_name=NA12877_ch_T0000809;gene_name=ENSG00000309329;ID=NA12877_ch_T0000809;Name=ENSG00000309329
NA12877_chrY	CAT	exon	9457874	9458447	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000809;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000809;transcript_name=NA12877_ch_T0000809;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000809:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9458448	9468202	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000809;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000809;transcript_name=NA12877_ch_T0000809;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000809:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9468203	9468292	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000809;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000809;transcript_name=NA12877_ch_T0000809;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000809:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9468293	9470730	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000809;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000809;transcript_name=NA12877_ch_T0000809;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000809:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9470731	9470881	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000809;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000809;transcript_name=NA12877_ch_T0000809;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000809:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9457881	9470886	1000	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000810;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_G0000267;transcript_name=NA12877_ch_T0000810;gene_name=ENSG00000309329;ID=NA12877_ch_T0000810;Name=ENSG00000309329
NA12877_chrY	CAT	exon	9457881	9458447	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000810;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000810;transcript_name=NA12877_ch_T0000810;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000810:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9458448	9462357	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000810;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000810;transcript_name=NA12877_ch_T0000810;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000810:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462358	9462459	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000810;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000810;transcript_name=NA12877_ch_T0000810;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000810:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462460	9462665	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000810;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000810;transcript_name=NA12877_ch_T0000810;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000810:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462666	9462778	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000810;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000810;transcript_name=NA12877_ch_T0000810;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000810:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462779	9468202	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000810;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000810;transcript_name=NA12877_ch_T0000810;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000810:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9468203	9468292	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000810;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000810;transcript_name=NA12877_ch_T0000810;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000810:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9468293	9470730	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000810;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000810;transcript_name=NA12877_ch_T0000810;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000810:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9470731	9470886	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000810;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000810;transcript_name=NA12877_ch_T0000810;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000810:4;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9458129	9479922	1000	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000811;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_G0000267;transcript_name=NA12877_ch_T0000811;gene_name=ENSG00000309329;ID=NA12877_ch_T0000811;Name=ENSG00000309329
NA12877_chrY	CAT	exon	9458129	9458447	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000811;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000811;transcript_name=NA12877_ch_T0000811;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000811:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9458448	9459996	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000811;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000811;transcript_name=NA12877_ch_T0000811;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000811:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9459997	9460110	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000811;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000811;transcript_name=NA12877_ch_T0000811;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000811:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9460111	9462357	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000811;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000811;transcript_name=NA12877_ch_T0000811;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000811:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462358	9462459	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000811;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000811;transcript_name=NA12877_ch_T0000811;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000811:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462460	9462665	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000811;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000811;transcript_name=NA12877_ch_T0000811;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000811:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462666	9462778	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000811;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000811;transcript_name=NA12877_ch_T0000811;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000811:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462779	9468202	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000811;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000811;transcript_name=NA12877_ch_T0000811;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000811:3;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9468203	9468292	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000811;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000811;transcript_name=NA12877_ch_T0000811;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000811:4;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9468293	9479884	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000811;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000811;transcript_name=NA12877_ch_T0000811;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000811:4;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9479885	9479922	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000811;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000811;transcript_name=NA12877_ch_T0000811;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000811:5;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9467456	9470876	1000	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000813;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_G0000267;transcript_name=NA12877_ch_T0000813;gene_name=ENSG00000309329;ID=NA12877_ch_T0000813;Name=ENSG00000309329
NA12877_chrY	CAT	exon	9467456	9467972	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000813;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000813;transcript_name=NA12877_ch_T0000813;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000813:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9467973	9468202	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000813;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000813;transcript_name=NA12877_ch_T0000813;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000813:0;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9468203	9468292	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000813;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000813;transcript_name=NA12877_ch_T0000813;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000813:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9468293	9470730	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000813;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000813;transcript_name=NA12877_ch_T0000813;gene_name=ENSG00000309329;ID=intron:NA12877_ch_T0000813:1;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9470731	9470876	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=NA12877_ch_T0000813;gene_id=NA12877_ch_G0000267;Parent=NA12877_ch_T0000813;transcript_name=NA12877_ch_T0000813;gene_name=ENSG00000309329;ID=exon:NA12877_ch_T0000813:2;Name=ENSG00000309329;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9458147	9468852	.	-	.	source_gene_common_name=RBMY3AP;source_gene=ENSG00000231436.1;gene_id=NA12877_ch_G0000268;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=NA12877_ch_G0000268;Name=RBMY3AP
NA12877_chrY	CAT	transcript	9458147	9468852	1000	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_G0000268;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=NA12877_ch_T0000812;Name=RBMY3AP
NA12877_chrY	CAT	exon	9458147	9458447	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=exon:NA12877_ch_T0000812:0;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9458448	9458859	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=intron:NA12877_ch_T0000812:0;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9458860	9458943	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=exon:NA12877_ch_T0000812:1;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9458944	9459028	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=intron:NA12877_ch_T0000812:1;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9459029	9459139	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=exon:NA12877_ch_T0000812:2;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9459140	9459996	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=intron:NA12877_ch_T0000812:2;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9459997	9460110	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=exon:NA12877_ch_T0000812:3;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9460111	9462665	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=intron:NA12877_ch_T0000812:3;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9462666	9462812	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=exon:NA12877_ch_T0000812:4;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9462813	9464728	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=intron:NA12877_ch_T0000812:4;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9464729	9464903	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=exon:NA12877_ch_T0000812:5;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9464904	9468202	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=intron:NA12877_ch_T0000812:5;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9468203	9468306	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=exon:NA12877_ch_T0000812:6;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9468307	9468743	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=intron:NA12877_ch_T0000812:6;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9468744	9468852	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=NA12877_ch_T0000812;gene_id=NA12877_ch_G0000268;Parent=NA12877_ch_T0000812;transcript_name=NA12877_ch_T0000812;gene_name=RBMY3AP;ID=exon:NA12877_ch_T0000812:7;Name=RBMY3AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9471759	9473928	.	+	.	source_gene_common_name=TSPY25P;source_gene=ENSG00000234110.1;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;gene_id=NA12877_ch_G0000269;gene_biotype=unprocessed_pseudogene;gene_name=TSPY25P;gene_sources=liftoff;ID=NA12877_ch_G0000269;Name=TSPY25P
NA12877_chrY	CAT	transcript	9471759	9473928	1000	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=NA12877_ch_T0000814;gene_id=NA12877_ch_G0000269;Parent=NA12877_ch_G0000269;transcript_name=NA12877_ch_T0000814;gene_name=TSPY25P;ID=NA12877_ch_T0000814;Name=TSPY25P
NA12877_chrY	CAT	exon	9471759	9472121	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=NA12877_ch_T0000814;gene_id=NA12877_ch_G0000269;Parent=NA12877_ch_T0000814;transcript_name=NA12877_ch_T0000814;gene_name=TSPY25P;ID=exon:NA12877_ch_T0000814:0;Name=TSPY25P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9472122	9473145	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=NA12877_ch_T0000814;gene_id=NA12877_ch_G0000269;Parent=NA12877_ch_T0000814;transcript_name=NA12877_ch_T0000814;gene_name=TSPY25P;ID=intron:NA12877_ch_T0000814:0;Name=TSPY25P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9473146	9473232	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=NA12877_ch_T0000814;gene_id=NA12877_ch_G0000269;Parent=NA12877_ch_T0000814;transcript_name=NA12877_ch_T0000814;gene_name=TSPY25P;ID=exon:NA12877_ch_T0000814:1;Name=TSPY25P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9473233	9473437	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=NA12877_ch_T0000814;gene_id=NA12877_ch_G0000269;Parent=NA12877_ch_T0000814;transcript_name=NA12877_ch_T0000814;gene_name=TSPY25P;ID=intron:NA12877_ch_T0000814:1;Name=TSPY25P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9473438	9473550	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=NA12877_ch_T0000814;gene_id=NA12877_ch_G0000269;Parent=NA12877_ch_T0000814;transcript_name=NA12877_ch_T0000814;gene_name=TSPY25P;ID=exon:NA12877_ch_T0000814:2;Name=TSPY25P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9473551	9473636	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=NA12877_ch_T0000814;gene_id=NA12877_ch_G0000269;Parent=NA12877_ch_T0000814;transcript_name=NA12877_ch_T0000814;gene_name=TSPY25P;ID=intron:NA12877_ch_T0000814:2;Name=TSPY25P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9473637	9473777	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=NA12877_ch_T0000814;gene_id=NA12877_ch_G0000269;Parent=NA12877_ch_T0000814;transcript_name=NA12877_ch_T0000814;gene_name=TSPY25P;ID=exon:NA12877_ch_T0000814:3;Name=TSPY25P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9473778	9473887	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=NA12877_ch_T0000814;gene_id=NA12877_ch_G0000269;Parent=NA12877_ch_T0000814;transcript_name=NA12877_ch_T0000814;gene_name=TSPY25P;ID=intron:NA12877_ch_T0000814:3;Name=TSPY25P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9473888	9473928	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=NA12877_ch_T0000814;gene_id=NA12877_ch_G0000269;Parent=NA12877_ch_T0000814;transcript_name=NA12877_ch_T0000814;gene_name=TSPY25P;ID=exon:NA12877_ch_T0000814:4;Name=TSPY25P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9487825	9488292	.	-	.	source_gene_common_name=TSPY16P;source_gene=ENSG00000226223.1;alternative_source_transcripts=ENST00000449843.1,ENST00000449843.1;gene_id=NA12877_ch_G0000270;gene_biotype=unprocessed_pseudogene;gene_name=TSPY16P;gene_sources=liftoff;ID=NA12877_ch_G0000270;Name=TSPY16P
NA12877_chrY	CAT	transcript	9487825	9488292	1000	-	.	source_transcript=ENST00000449843.1;source_transcript_name=TSPY16P-201;source_gene=ENSG00000226223.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226223.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449843.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY16P;alternative_source_transcripts=ENST00000449843.1,ENST00000449843.1;transcript_id=NA12877_ch_T0000815;gene_id=NA12877_ch_G0000270;Parent=NA12877_ch_G0000270;transcript_name=NA12877_ch_T0000815;gene_name=TSPY16P;ID=NA12877_ch_T0000815;Name=TSPY16P
NA12877_chrY	CAT	exon	9487825	9488292	.	-	.	source_transcript=ENST00000449843.1;source_transcript_name=TSPY16P-201;source_gene=ENSG00000226223.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226223.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449843.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY16P;alternative_source_transcripts=ENST00000449843.1,ENST00000449843.1;transcript_id=NA12877_ch_T0000815;gene_id=NA12877_ch_G0000270;Parent=NA12877_ch_T0000815;transcript_name=NA12877_ch_T0000815;gene_name=TSPY16P;ID=exon:NA12877_ch_T0000815:0;Name=TSPY16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9512805	9516586	.	+	.	source_gene_common_name=ENSG00000232617;source_gene=ENSG00000232617.1;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;gene_id=NA12877_ch_G0000271;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000232617;gene_sources=liftoff;ID=NA12877_ch_G0000271;Name=ENSG00000232617
NA12877_chrY	CAT	transcript	9512805	9516586	1000	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=NA12877_ch_T0000816;gene_id=NA12877_ch_G0000271;Parent=NA12877_ch_G0000271;transcript_name=NA12877_ch_T0000816;gene_name=ENSG00000232617;ID=NA12877_ch_T0000816;Name=ENSG00000232617
NA12877_chrY	CAT	exon	9512805	9512977	.	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=NA12877_ch_T0000816;gene_id=NA12877_ch_G0000271;Parent=NA12877_ch_T0000816;transcript_name=NA12877_ch_T0000816;gene_name=ENSG00000232617;ID=exon:NA12877_ch_T0000816:0;Name=ENSG00000232617;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9512978	9516498	.	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=NA12877_ch_T0000816;gene_id=NA12877_ch_G0000271;Parent=NA12877_ch_T0000816;transcript_name=NA12877_ch_T0000816;gene_name=ENSG00000232617;ID=intron:NA12877_ch_T0000816:0;Name=ENSG00000232617;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9516499	9516586	.	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=NA12877_ch_T0000816;gene_id=NA12877_ch_G0000271;Parent=NA12877_ch_T0000816;transcript_name=NA12877_ch_T0000816;gene_name=ENSG00000232617;ID=exon:NA12877_ch_T0000816:1;Name=ENSG00000232617;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9538623	9549279	.	+	.	source_gene_common_name=TTTY8;source_gene=ENSG00000183385.10;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;gene_id=NA12877_ch_G0000272;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=NA12877_ch_G0000272;Name=TTTY8
NA12877_chrY	CAT	transcript	9538623	9541283	1000	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=NA12877_ch_T0000817;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_G0000272;transcript_name=NA12877_ch_T0000817;gene_name=TTTY8;ID=NA12877_ch_T0000817;Name=TTTY8
NA12877_chrY	CAT	exon	9538623	9538662	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=NA12877_ch_T0000817;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000817;transcript_name=NA12877_ch_T0000817;gene_name=TTTY8;ID=exon:NA12877_ch_T0000817:0;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9538663	9539296	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=NA12877_ch_T0000817;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000817;transcript_name=NA12877_ch_T0000817;gene_name=TTTY8;ID=intron:NA12877_ch_T0000817:0;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9539297	9539501	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=NA12877_ch_T0000817;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000817;transcript_name=NA12877_ch_T0000817;gene_name=TTTY8;ID=exon:NA12877_ch_T0000817:1;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9539502	9541093	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=NA12877_ch_T0000817;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000817;transcript_name=NA12877_ch_T0000817;gene_name=TTTY8;ID=intron:NA12877_ch_T0000817:1;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9541094	9541283	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=NA12877_ch_T0000817;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000817;transcript_name=NA12877_ch_T0000817;gene_name=TTTY8;ID=exon:NA12877_ch_T0000817:2;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9538627	9549279	1000	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=NA12877_ch_T0000818;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_G0000272;transcript_name=NA12877_ch_T0000818;gene_name=TTTY8;ID=NA12877_ch_T0000818;Name=TTTY8
NA12877_chrY	CAT	exon	9538627	9538819	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=NA12877_ch_T0000818;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000818;transcript_name=NA12877_ch_T0000818;gene_name=TTTY8;ID=exon:NA12877_ch_T0000818:0;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9538820	9539296	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=NA12877_ch_T0000818;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000818;transcript_name=NA12877_ch_T0000818;gene_name=TTTY8;ID=intron:NA12877_ch_T0000818:0;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9539297	9539501	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=NA12877_ch_T0000818;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000818;transcript_name=NA12877_ch_T0000818;gene_name=TTTY8;ID=exon:NA12877_ch_T0000818:1;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9539502	9549028	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=NA12877_ch_T0000818;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000818;transcript_name=NA12877_ch_T0000818;gene_name=TTTY8;ID=intron:NA12877_ch_T0000818:1;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9549029	9549279	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=NA12877_ch_T0000818;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000818;transcript_name=NA12877_ch_T0000818;gene_name=TTTY8;ID=exon:NA12877_ch_T0000818:2;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9538639	9549251	1000	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=NA12877_ch_T0000819;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_G0000272;transcript_name=NA12877_ch_T0000819;gene_name=TTTY8;ID=NA12877_ch_T0000819;Name=TTTY8
NA12877_chrY	CAT	exon	9538639	9538662	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=NA12877_ch_T0000819;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000819;transcript_name=NA12877_ch_T0000819;gene_name=TTTY8;ID=exon:NA12877_ch_T0000819:0;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9538663	9539296	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=NA12877_ch_T0000819;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000819;transcript_name=NA12877_ch_T0000819;gene_name=TTTY8;ID=intron:NA12877_ch_T0000819:0;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9539297	9539501	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=NA12877_ch_T0000819;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000819;transcript_name=NA12877_ch_T0000819;gene_name=TTTY8;ID=exon:NA12877_ch_T0000819:1;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9539502	9549028	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=NA12877_ch_T0000819;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000819;transcript_name=NA12877_ch_T0000819;gene_name=TTTY8;ID=intron:NA12877_ch_T0000819:1;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9549029	9549251	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=NA12877_ch_T0000819;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000819;transcript_name=NA12877_ch_T0000819;gene_name=TTTY8;ID=exon:NA12877_ch_T0000819:2;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9538653	9541283	1000	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=NA12877_ch_T0000820;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_G0000272;transcript_name=NA12877_ch_T0000820;gene_name=TTTY8;ID=NA12877_ch_T0000820;Name=TTTY8
NA12877_chrY	CAT	exon	9538653	9538819	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=NA12877_ch_T0000820;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000820;transcript_name=NA12877_ch_T0000820;gene_name=TTTY8;ID=exon:NA12877_ch_T0000820:0;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9538820	9539296	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=NA12877_ch_T0000820;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000820;transcript_name=NA12877_ch_T0000820;gene_name=TTTY8;ID=intron:NA12877_ch_T0000820:0;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9539297	9539501	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=NA12877_ch_T0000820;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000820;transcript_name=NA12877_ch_T0000820;gene_name=TTTY8;ID=exon:NA12877_ch_T0000820:1;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9539502	9541093	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=NA12877_ch_T0000820;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000820;transcript_name=NA12877_ch_T0000820;gene_name=TTTY8;ID=intron:NA12877_ch_T0000820:1;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9541094	9541283	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=NA12877_ch_T0000820;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000820;transcript_name=NA12877_ch_T0000820;gene_name=TTTY8;ID=exon:NA12877_ch_T0000820:2;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9538659	9541541	1000	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=NA12877_ch_T0000821;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_G0000272;transcript_name=NA12877_ch_T0000821;gene_name=TTTY8;ID=NA12877_ch_T0000821;Name=TTTY8
NA12877_chrY	CAT	exon	9538659	9538819	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=NA12877_ch_T0000821;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000821;transcript_name=NA12877_ch_T0000821;gene_name=TTTY8;ID=exon:NA12877_ch_T0000821:0;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9538820	9539296	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=NA12877_ch_T0000821;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000821;transcript_name=NA12877_ch_T0000821;gene_name=TTTY8;ID=intron:NA12877_ch_T0000821:0;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9539297	9539501	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=NA12877_ch_T0000821;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000821;transcript_name=NA12877_ch_T0000821;gene_name=TTTY8;ID=exon:NA12877_ch_T0000821:1;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9539502	9541364	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=NA12877_ch_T0000821;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000821;transcript_name=NA12877_ch_T0000821;gene_name=TTTY8;ID=intron:NA12877_ch_T0000821:1;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9541365	9541541	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=NA12877_ch_T0000821;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000821;transcript_name=NA12877_ch_T0000821;gene_name=TTTY8;ID=exon:NA12877_ch_T0000821:2;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9538684	9541529	1000	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=NA12877_ch_T0000822;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_G0000272;transcript_name=NA12877_ch_T0000822;gene_name=TTTY8;ID=NA12877_ch_T0000822;Name=TTTY8
NA12877_chrY	CAT	exon	9538684	9538819	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=NA12877_ch_T0000822;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000822;transcript_name=NA12877_ch_T0000822;gene_name=TTTY8;ID=exon:NA12877_ch_T0000822:0;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9538820	9539300	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=NA12877_ch_T0000822;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000822;transcript_name=NA12877_ch_T0000822;gene_name=TTTY8;ID=intron:NA12877_ch_T0000822:0;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9539301	9539501	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=NA12877_ch_T0000822;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000822;transcript_name=NA12877_ch_T0000822;gene_name=TTTY8;ID=exon:NA12877_ch_T0000822:1;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9539502	9541364	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=NA12877_ch_T0000822;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000822;transcript_name=NA12877_ch_T0000822;gene_name=TTTY8;ID=intron:NA12877_ch_T0000822:1;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9541365	9541529	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=NA12877_ch_T0000822;gene_id=NA12877_ch_G0000272;Parent=NA12877_ch_T0000822;transcript_name=NA12877_ch_T0000822;gene_name=TTTY8;ID=exon:NA12877_ch_T0000822:2;Name=TTTY8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9554408	9571448	.	-	.	source_gene_common_name=TTTY7B;source_gene=ENSG00000147761.10;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;gene_id=NA12877_ch_G0000273;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=NA12877_ch_G0000273;Name=TTTY7B
NA12877_chrY	CAT	transcript	9554408	9562846	1000	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=NA12877_ch_T0000823;Name=TTTY7B
NA12877_chrY	CAT	exon	9554408	9554653	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000823:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9554654	9554899	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000823:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9554900	9555155	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000823:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9555156	9556128	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000823:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9556129	9556242	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000823:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9556243	9558159	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000823:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9558160	9558636	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000823:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9558637	9559324	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000823:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9559325	9559399	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000823:4;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9559400	9561706	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000823:4;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9561707	9561868	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000823:5;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561869	9562809	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000823:5;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9562810	9562846	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=NA12877_ch_T0000823;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000823;transcript_name=NA12877_ch_T0000823;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000823:6;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9554408	9562846	1000	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=NA12877_ch_T0000824;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000824;gene_name=TTTY7B;ID=NA12877_ch_T0000824;Name=TTTY7B
NA12877_chrY	CAT	exon	9554408	9554653	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=NA12877_ch_T0000824;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000824;transcript_name=NA12877_ch_T0000824;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000824:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9554654	9556128	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=NA12877_ch_T0000824;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000824;transcript_name=NA12877_ch_T0000824;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000824:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9556129	9556242	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=NA12877_ch_T0000824;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000824;transcript_name=NA12877_ch_T0000824;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000824:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9556243	9558159	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=NA12877_ch_T0000824;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000824;transcript_name=NA12877_ch_T0000824;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000824:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9558160	9558636	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=NA12877_ch_T0000824;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000824;transcript_name=NA12877_ch_T0000824;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000824:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9558637	9559324	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=NA12877_ch_T0000824;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000824;transcript_name=NA12877_ch_T0000824;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000824:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9559325	9559399	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=NA12877_ch_T0000824;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000824;transcript_name=NA12877_ch_T0000824;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000824:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9559400	9561706	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=NA12877_ch_T0000824;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000824;transcript_name=NA12877_ch_T0000824;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000824:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9561707	9561868	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=NA12877_ch_T0000824;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000824;transcript_name=NA12877_ch_T0000824;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000824:4;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561869	9562809	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=NA12877_ch_T0000824;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000824;transcript_name=NA12877_ch_T0000824;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000824:4;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9562810	9562846	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=NA12877_ch_T0000824;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000824;transcript_name=NA12877_ch_T0000824;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000824:5;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9554408	9558409	1000	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=NA12877_ch_T0000825;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000825;gene_name=TTTY7B;ID=NA12877_ch_T0000825;Name=TTTY7B
NA12877_chrY	CAT	exon	9554408	9554653	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=NA12877_ch_T0000825;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000825;transcript_name=NA12877_ch_T0000825;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000825:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9554654	9556128	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=NA12877_ch_T0000825;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000825;transcript_name=NA12877_ch_T0000825;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000825:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9556129	9556341	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=NA12877_ch_T0000825;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000825;transcript_name=NA12877_ch_T0000825;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000825:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9556342	9558159	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=NA12877_ch_T0000825;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000825;transcript_name=NA12877_ch_T0000825;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000825:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9558160	9558409	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=NA12877_ch_T0000825;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000825;transcript_name=NA12877_ch_T0000825;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000825:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9554408	9568970	1000	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=NA12877_ch_T0000826;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000826;gene_name=TTTY7B;ID=NA12877_ch_T0000826;Name=TTTY7B
NA12877_chrY	CAT	exon	9554408	9554653	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=NA12877_ch_T0000826;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000826;transcript_name=NA12877_ch_T0000826;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000826:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9554654	9556128	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=NA12877_ch_T0000826;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000826;transcript_name=NA12877_ch_T0000826;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000826:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9556129	9556242	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=NA12877_ch_T0000826;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000826;transcript_name=NA12877_ch_T0000826;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000826:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9556243	9559324	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=NA12877_ch_T0000826;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000826;transcript_name=NA12877_ch_T0000826;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000826:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9559325	9559399	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=NA12877_ch_T0000826;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000826;transcript_name=NA12877_ch_T0000826;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000826:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9559400	9561706	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=NA12877_ch_T0000826;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000826;transcript_name=NA12877_ch_T0000826;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000826:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9561707	9561788	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=NA12877_ch_T0000826;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000826;transcript_name=NA12877_ch_T0000826;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000826:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9568678	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=NA12877_ch_T0000826;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000826;transcript_name=NA12877_ch_T0000826;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000826:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9568679	9568970	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=NA12877_ch_T0000826;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000826;transcript_name=NA12877_ch_T0000826;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000826:4;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9554408	9568970	1000	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=NA12877_ch_T0000827;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000827;gene_name=TTTY7B;ID=NA12877_ch_T0000827;Name=TTTY7B
NA12877_chrY	CAT	exon	9554408	9554653	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=NA12877_ch_T0000827;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000827;transcript_name=NA12877_ch_T0000827;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000827:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9554654	9556128	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=NA12877_ch_T0000827;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000827;transcript_name=NA12877_ch_T0000827;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000827:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9556129	9556242	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=NA12877_ch_T0000827;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000827;transcript_name=NA12877_ch_T0000827;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000827:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9556243	9559324	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=NA12877_ch_T0000827;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000827;transcript_name=NA12877_ch_T0000827;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000827:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9559325	9559399	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=NA12877_ch_T0000827;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000827;transcript_name=NA12877_ch_T0000827;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000827:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9559400	9561706	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=NA12877_ch_T0000827;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000827;transcript_name=NA12877_ch_T0000827;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000827:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9561707	9561788	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=NA12877_ch_T0000827;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000827;transcript_name=NA12877_ch_T0000827;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000827:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9567396	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=NA12877_ch_T0000827;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000827;transcript_name=NA12877_ch_T0000827;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000827:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9567397	9567554	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=NA12877_ch_T0000827;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000827;transcript_name=NA12877_ch_T0000827;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000827:4;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9567555	9568678	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=NA12877_ch_T0000827;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000827;transcript_name=NA12877_ch_T0000827;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000827:4;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9568679	9568970	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=NA12877_ch_T0000827;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000827;transcript_name=NA12877_ch_T0000827;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000827:5;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9554408	9558461	1000	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=NA12877_ch_T0000828;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000828;gene_name=TTTY7B;ID=NA12877_ch_T0000828;Name=TTTY7B
NA12877_chrY	CAT	exon	9554408	9554653	.	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=NA12877_ch_T0000828;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000828;transcript_name=NA12877_ch_T0000828;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000828:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9554654	9558159	.	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=NA12877_ch_T0000828;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000828;transcript_name=NA12877_ch_T0000828;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000828:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9558160	9558461	.	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=NA12877_ch_T0000828;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000828;transcript_name=NA12877_ch_T0000828;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000828:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9554412	9566555	1000	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=NA12877_ch_T0000829;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000829;gene_name=TTTY7B;ID=NA12877_ch_T0000829;Name=TTTY7B
NA12877_chrY	CAT	exon	9554412	9554653	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=NA12877_ch_T0000829;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000829;transcript_name=NA12877_ch_T0000829;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000829:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9554654	9556128	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=NA12877_ch_T0000829;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000829;transcript_name=NA12877_ch_T0000829;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000829:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9556129	9556242	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=NA12877_ch_T0000829;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000829;transcript_name=NA12877_ch_T0000829;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000829:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9556243	9559324	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=NA12877_ch_T0000829;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000829;transcript_name=NA12877_ch_T0000829;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000829:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9559325	9559399	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=NA12877_ch_T0000829;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000829;transcript_name=NA12877_ch_T0000829;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000829:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9559400	9561706	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=NA12877_ch_T0000829;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000829;transcript_name=NA12877_ch_T0000829;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000829:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9561707	9561788	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=NA12877_ch_T0000829;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000829;transcript_name=NA12877_ch_T0000829;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000829:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9566261	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=NA12877_ch_T0000829;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000829;transcript_name=NA12877_ch_T0000829;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000829:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9566262	9566555	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=NA12877_ch_T0000829;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000829;transcript_name=NA12877_ch_T0000829;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000829:4;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9561613	9568991	1000	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=NA12877_ch_T0000830;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000830;gene_name=TTTY7B;ID=NA12877_ch_T0000830;Name=TTTY7B
NA12877_chrY	CAT	exon	9561613	9561788	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=NA12877_ch_T0000830;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000830;transcript_name=NA12877_ch_T0000830;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000830:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9567396	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=NA12877_ch_T0000830;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000830;transcript_name=NA12877_ch_T0000830;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000830:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9567397	9567554	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=NA12877_ch_T0000830;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000830;transcript_name=NA12877_ch_T0000830;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000830:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9567555	9568678	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=NA12877_ch_T0000830;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000830;transcript_name=NA12877_ch_T0000830;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000830:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9568679	9568991	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=NA12877_ch_T0000830;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000830;transcript_name=NA12877_ch_T0000830;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000830:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9561614	9568998	1000	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=NA12877_ch_T0000831;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000831;gene_name=TTTY7B;ID=NA12877_ch_T0000831;Name=TTTY7B
NA12877_chrY	CAT	exon	9561614	9561788	.	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=NA12877_ch_T0000831;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000831;transcript_name=NA12877_ch_T0000831;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000831:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9568678	.	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=NA12877_ch_T0000831;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000831;transcript_name=NA12877_ch_T0000831;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000831:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9568679	9568998	.	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=NA12877_ch_T0000831;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000831;transcript_name=NA12877_ch_T0000831;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000831:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9561618	9568965	1000	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=NA12877_ch_T0000832;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000832;gene_name=TTTY7B;ID=NA12877_ch_T0000832;Name=TTTY7B
NA12877_chrY	CAT	exon	9561618	9561788	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=NA12877_ch_T0000832;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000832;transcript_name=NA12877_ch_T0000832;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000832:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9564704	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=NA12877_ch_T0000832;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000832;transcript_name=NA12877_ch_T0000832;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000832:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9564705	9564811	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=NA12877_ch_T0000832;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000832;transcript_name=NA12877_ch_T0000832;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000832:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9564812	9565207	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=NA12877_ch_T0000832;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000832;transcript_name=NA12877_ch_T0000832;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000832:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9565208	9565341	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=NA12877_ch_T0000832;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000832;transcript_name=NA12877_ch_T0000832;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000832:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9565342	9568678	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=NA12877_ch_T0000832;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000832;transcript_name=NA12877_ch_T0000832;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000832:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9568679	9568965	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=NA12877_ch_T0000832;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000832;transcript_name=NA12877_ch_T0000832;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000832:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9561619	9568969	1000	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=NA12877_ch_T0000833;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000833;gene_name=TTTY7B;ID=NA12877_ch_T0000833;Name=TTTY7B
NA12877_chrY	CAT	exon	9561619	9561788	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=NA12877_ch_T0000833;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000833;transcript_name=NA12877_ch_T0000833;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000833:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9564704	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=NA12877_ch_T0000833;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000833;transcript_name=NA12877_ch_T0000833;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000833:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9564705	9564811	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=NA12877_ch_T0000833;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000833;transcript_name=NA12877_ch_T0000833;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000833:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9564812	9565207	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=NA12877_ch_T0000833;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000833;transcript_name=NA12877_ch_T0000833;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000833:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9565208	9565341	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=NA12877_ch_T0000833;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000833;transcript_name=NA12877_ch_T0000833;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000833:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9565342	9567396	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=NA12877_ch_T0000833;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000833;transcript_name=NA12877_ch_T0000833;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000833:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9567397	9567554	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=NA12877_ch_T0000833;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000833;transcript_name=NA12877_ch_T0000833;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000833:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9567555	9568678	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=NA12877_ch_T0000833;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000833;transcript_name=NA12877_ch_T0000833;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000833:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9568679	9568969	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=NA12877_ch_T0000833;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000833;transcript_name=NA12877_ch_T0000833;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000833:4;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9561620	9568978	1000	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=NA12877_ch_T0000834;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000834;gene_name=TTTY7B;ID=NA12877_ch_T0000834;Name=TTTY7B
NA12877_chrY	CAT	exon	9561620	9561788	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=NA12877_ch_T0000834;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000834;transcript_name=NA12877_ch_T0000834;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000834:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9565207	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=NA12877_ch_T0000834;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000834;transcript_name=NA12877_ch_T0000834;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000834:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9565208	9565341	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=NA12877_ch_T0000834;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000834;transcript_name=NA12877_ch_T0000834;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000834:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9565342	9568678	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=NA12877_ch_T0000834;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000834;transcript_name=NA12877_ch_T0000834;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000834:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9568679	9568978	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=NA12877_ch_T0000834;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000834;transcript_name=NA12877_ch_T0000834;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000834:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9561623	9568944	1000	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=NA12877_ch_T0000835;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000835;gene_name=TTTY7B;ID=NA12877_ch_T0000835;Name=TTTY7B
NA12877_chrY	CAT	exon	9561623	9561788	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=NA12877_ch_T0000835;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000835;transcript_name=NA12877_ch_T0000835;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000835:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9565207	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=NA12877_ch_T0000835;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000835;transcript_name=NA12877_ch_T0000835;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000835:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9565208	9565341	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=NA12877_ch_T0000835;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000835;transcript_name=NA12877_ch_T0000835;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000835:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9565342	9567396	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=NA12877_ch_T0000835;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000835;transcript_name=NA12877_ch_T0000835;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000835:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9567397	9567554	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=NA12877_ch_T0000835;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000835;transcript_name=NA12877_ch_T0000835;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000835:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9567555	9568678	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=NA12877_ch_T0000835;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000835;transcript_name=NA12877_ch_T0000835;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000835:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9568679	9568944	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=NA12877_ch_T0000835;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000835;transcript_name=NA12877_ch_T0000835;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000835:3;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9561625	9568965	1000	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=NA12877_ch_T0000836;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000836;gene_name=TTTY7B;ID=NA12877_ch_T0000836;Name=TTTY7B
NA12877_chrY	CAT	exon	9561625	9561788	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=NA12877_ch_T0000836;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000836;transcript_name=NA12877_ch_T0000836;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000836:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9564704	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=NA12877_ch_T0000836;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000836;transcript_name=NA12877_ch_T0000836;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000836:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9564705	9564811	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=NA12877_ch_T0000836;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000836;transcript_name=NA12877_ch_T0000836;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000836:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9564812	9568678	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=NA12877_ch_T0000836;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000836;transcript_name=NA12877_ch_T0000836;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000836:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9568679	9568965	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=NA12877_ch_T0000836;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000836;transcript_name=NA12877_ch_T0000836;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000836:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9561626	9571448	1000	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=NA12877_ch_T0000837;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000837;gene_name=TTTY7B;ID=NA12877_ch_T0000837;Name=TTTY7B
NA12877_chrY	CAT	exon	9561626	9561788	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=NA12877_ch_T0000837;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000837;transcript_name=NA12877_ch_T0000837;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000837:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9567396	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=NA12877_ch_T0000837;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000837;transcript_name=NA12877_ch_T0000837;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000837:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9567397	9567554	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=NA12877_ch_T0000837;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000837;transcript_name=NA12877_ch_T0000837;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000837:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9567555	9571195	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=NA12877_ch_T0000837;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000837;transcript_name=NA12877_ch_T0000837;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000837:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9571196	9571448	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=NA12877_ch_T0000837;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000837;transcript_name=NA12877_ch_T0000837;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000837:2;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9561626	9566563	1000	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=NA12877_ch_T0000838;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000838;gene_name=TTTY7B;ID=NA12877_ch_T0000838;Name=TTTY7B
NA12877_chrY	CAT	exon	9561626	9561788	.	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=NA12877_ch_T0000838;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000838;transcript_name=NA12877_ch_T0000838;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000838:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9566261	.	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=NA12877_ch_T0000838;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000838;transcript_name=NA12877_ch_T0000838;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000838:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9566262	9566563	.	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=NA12877_ch_T0000838;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000838;transcript_name=NA12877_ch_T0000838;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000838:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9561626	9563304	1000	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=NA12877_ch_T0000839;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000839;gene_name=TTTY7B;ID=NA12877_ch_T0000839;Name=TTTY7B
NA12877_chrY	CAT	exon	9561626	9561788	.	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=NA12877_ch_T0000839;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000839;transcript_name=NA12877_ch_T0000839;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000839:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9561789	9562363	.	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=NA12877_ch_T0000839;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000839;transcript_name=NA12877_ch_T0000839;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000839:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9562364	9563304	.	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=NA12877_ch_T0000839;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000839;transcript_name=NA12877_ch_T0000839;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000839:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9565171	9568944	1000	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=NA12877_ch_T0000841;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_G0000273;transcript_name=NA12877_ch_T0000841;gene_name=TTTY7B;ID=NA12877_ch_T0000841;Name=TTTY7B
NA12877_chrY	CAT	exon	9565171	9565341	.	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=NA12877_ch_T0000841;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000841;transcript_name=NA12877_ch_T0000841;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000841:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9565342	9568678	.	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=NA12877_ch_T0000841;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000841;transcript_name=NA12877_ch_T0000841;gene_name=TTTY7B;ID=intron:NA12877_ch_T0000841:0;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9568679	9568944	.	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=NA12877_ch_T0000841;gene_id=NA12877_ch_G0000273;Parent=NA12877_ch_T0000841;transcript_name=NA12877_ch_T0000841;gene_name=TTTY7B;ID=exon:NA12877_ch_T0000841:1;Name=TTTY7B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9564746	9606245	.	+	.	source_gene_common_name=TTTY2;source_gene=ENSG00000212855.6;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;gene_id=NA12877_ch_G0000274;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=NA12877_ch_G0000274;Name=TTTY2
NA12877_chrY	CAT	transcript	9564746	9605893	1000	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=NA12877_ch_T0000840;Name=TTTY2
NA12877_chrY	CAT	exon	9564746	9564931	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=exon:NA12877_ch_T0000840:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9564932	9565961	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=intron:NA12877_ch_T0000840:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9565962	9566868	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=exon:NA12877_ch_T0000840:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9566869	9589907	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=intron:NA12877_ch_T0000840:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9589908	9589985	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=exon:NA12877_ch_T0000840:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9589986	9599932	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=intron:NA12877_ch_T0000840:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600081	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=exon:NA12877_ch_T0000840:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600082	9600773	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=intron:NA12877_ch_T0000840:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=exon:NA12877_ch_T0000840:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9603760	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=intron:NA12877_ch_T0000840:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603761	9603839	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=exon:NA12877_ch_T0000840:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9603840	9603959	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=intron:NA12877_ch_T0000840:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=exon:NA12877_ch_T0000840:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=intron:NA12877_ch_T0000840:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9605893	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=NA12877_ch_T0000840;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000840;transcript_name=NA12877_ch_T0000840;gene_name=TTTY2;ID=exon:NA12877_ch_T0000840:7;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9566652	9606060	1000	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=NA12877_ch_T0000842;Name=TTTY2
NA12877_chrY	CAT	exon	9566652	9566868	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=exon:NA12877_ch_T0000842:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9566869	9583172	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=intron:NA12877_ch_T0000842:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9583173	9583383	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=exon:NA12877_ch_T0000842:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9583384	9589907	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=intron:NA12877_ch_T0000842:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9589908	9589985	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=exon:NA12877_ch_T0000842:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9589986	9599932	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=intron:NA12877_ch_T0000842:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600081	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=exon:NA12877_ch_T0000842:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600082	9600773	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=intron:NA12877_ch_T0000842:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=exon:NA12877_ch_T0000842:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9603760	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=intron:NA12877_ch_T0000842:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603761	9603839	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=exon:NA12877_ch_T0000842:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9603840	9603959	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=intron:NA12877_ch_T0000842:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=exon:NA12877_ch_T0000842:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=intron:NA12877_ch_T0000842:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9606060	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=NA12877_ch_T0000842;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000842;transcript_name=NA12877_ch_T0000842;gene_name=TTTY2;ID=exon:NA12877_ch_T0000842:7;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9566668	9606245	1000	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=NA12877_ch_T0000843;Name=TTTY2
NA12877_chrY	CAT	exon	9566668	9566868	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=exon:NA12877_ch_T0000843:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9566869	9582910	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=intron:NA12877_ch_T0000843:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9582911	9582998	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=exon:NA12877_ch_T0000843:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9582999	9583172	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=intron:NA12877_ch_T0000843:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9583173	9583383	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=exon:NA12877_ch_T0000843:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9583384	9589907	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=intron:NA12877_ch_T0000843:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9589908	9589985	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=exon:NA12877_ch_T0000843:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9589986	9592005	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=intron:NA12877_ch_T0000843:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9592006	9592110	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=exon:NA12877_ch_T0000843:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9592111	9592461	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=intron:NA12877_ch_T0000843:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9592462	9592548	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=exon:NA12877_ch_T0000843:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9592549	9599932	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=intron:NA12877_ch_T0000843:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600160	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=exon:NA12877_ch_T0000843:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600161	9600773	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=intron:NA12877_ch_T0000843:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=exon:NA12877_ch_T0000843:7;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9603959	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=intron:NA12877_ch_T0000843:7;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=exon:NA12877_ch_T0000843:8;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=intron:NA12877_ch_T0000843:8;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9606245	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=NA12877_ch_T0000843;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000843;transcript_name=NA12877_ch_T0000843;gene_name=TTTY2;ID=exon:NA12877_ch_T0000843:9;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9569099	9606057	1000	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=NA12877_ch_T0000844;Name=TTTY2
NA12877_chrY	CAT	exon	9569099	9569283	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=exon:NA12877_ch_T0000844:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9569284	9582910	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=intron:NA12877_ch_T0000844:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9582911	9582998	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=exon:NA12877_ch_T0000844:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9582999	9583172	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=intron:NA12877_ch_T0000844:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9583173	9583383	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=exon:NA12877_ch_T0000844:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9583384	9589907	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=intron:NA12877_ch_T0000844:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9589908	9589985	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=exon:NA12877_ch_T0000844:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9589986	9599932	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=intron:NA12877_ch_T0000844:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600081	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=exon:NA12877_ch_T0000844:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600082	9600773	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=intron:NA12877_ch_T0000844:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=exon:NA12877_ch_T0000844:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9603959	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=intron:NA12877_ch_T0000844:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=exon:NA12877_ch_T0000844:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=intron:NA12877_ch_T0000844:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9606057	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=NA12877_ch_T0000844;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000844;transcript_name=NA12877_ch_T0000844;gene_name=TTTY2;ID=exon:NA12877_ch_T0000844:7;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9583863	9606245	1000	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=NA12877_ch_T0000845;Name=TTTY2
NA12877_chrY	CAT	exon	9583863	9584074	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=exon:NA12877_ch_T0000845:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9584075	9589907	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=intron:NA12877_ch_T0000845:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9589908	9589985	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=exon:NA12877_ch_T0000845:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9589986	9592005	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=intron:NA12877_ch_T0000845:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9592006	9592110	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=exon:NA12877_ch_T0000845:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9592111	9592461	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=intron:NA12877_ch_T0000845:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9592462	9592548	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=exon:NA12877_ch_T0000845:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9592549	9599932	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=intron:NA12877_ch_T0000845:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600081	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=exon:NA12877_ch_T0000845:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600082	9600773	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=intron:NA12877_ch_T0000845:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=exon:NA12877_ch_T0000845:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9603959	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=intron:NA12877_ch_T0000845:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=exon:NA12877_ch_T0000845:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=intron:NA12877_ch_T0000845:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9606245	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=NA12877_ch_T0000845;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000845;transcript_name=NA12877_ch_T0000845;gene_name=TTTY2;ID=exon:NA12877_ch_T0000845:7;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9583864	9606245	1000	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=NA12877_ch_T0000846;Name=TTTY2
NA12877_chrY	CAT	exon	9583864	9584068	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=exon:NA12877_ch_T0000846:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9584069	9589907	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=intron:NA12877_ch_T0000846:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9589908	9589985	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=exon:NA12877_ch_T0000846:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9589986	9599932	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=intron:NA12877_ch_T0000846:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600160	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=exon:NA12877_ch_T0000846:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600161	9600773	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=intron:NA12877_ch_T0000846:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=exon:NA12877_ch_T0000846:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9601451	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=intron:NA12877_ch_T0000846:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9601452	9601546	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=exon:NA12877_ch_T0000846:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9601547	9601909	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=intron:NA12877_ch_T0000846:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9601910	9602127	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=exon:NA12877_ch_T0000846:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9602128	9603760	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=intron:NA12877_ch_T0000846:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603761	9603839	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=exon:NA12877_ch_T0000846:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9603840	9603959	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=intron:NA12877_ch_T0000846:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=exon:NA12877_ch_T0000846:7;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=intron:NA12877_ch_T0000846:7;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9606245	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=NA12877_ch_T0000846;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000846;transcript_name=NA12877_ch_T0000846;gene_name=TTTY2;ID=exon:NA12877_ch_T0000846:8;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9583864	9606245	1000	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=NA12877_ch_T0000847;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000847;gene_name=TTTY2;ID=NA12877_ch_T0000847;Name=TTTY2
NA12877_chrY	CAT	exon	9583864	9584074	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=NA12877_ch_T0000847;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000847;transcript_name=NA12877_ch_T0000847;gene_name=TTTY2;ID=exon:NA12877_ch_T0000847:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9584075	9589907	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=NA12877_ch_T0000847;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000847;transcript_name=NA12877_ch_T0000847;gene_name=TTTY2;ID=intron:NA12877_ch_T0000847:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9589908	9589985	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=NA12877_ch_T0000847;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000847;transcript_name=NA12877_ch_T0000847;gene_name=TTTY2;ID=exon:NA12877_ch_T0000847:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9589986	9599932	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=NA12877_ch_T0000847;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000847;transcript_name=NA12877_ch_T0000847;gene_name=TTTY2;ID=intron:NA12877_ch_T0000847:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600081	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=NA12877_ch_T0000847;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000847;transcript_name=NA12877_ch_T0000847;gene_name=TTTY2;ID=exon:NA12877_ch_T0000847:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600082	9600773	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=NA12877_ch_T0000847;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000847;transcript_name=NA12877_ch_T0000847;gene_name=TTTY2;ID=intron:NA12877_ch_T0000847:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=NA12877_ch_T0000847;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000847;transcript_name=NA12877_ch_T0000847;gene_name=TTTY2;ID=exon:NA12877_ch_T0000847:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9603959	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=NA12877_ch_T0000847;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000847;transcript_name=NA12877_ch_T0000847;gene_name=TTTY2;ID=intron:NA12877_ch_T0000847:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=NA12877_ch_T0000847;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000847;transcript_name=NA12877_ch_T0000847;gene_name=TTTY2;ID=exon:NA12877_ch_T0000847:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=NA12877_ch_T0000847;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000847;transcript_name=NA12877_ch_T0000847;gene_name=TTTY2;ID=intron:NA12877_ch_T0000847:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9606245	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=NA12877_ch_T0000847;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000847;transcript_name=NA12877_ch_T0000847;gene_name=TTTY2;ID=exon:NA12877_ch_T0000847:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9583876	9606245	1000	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=NA12877_ch_T0000848;Name=TTTY2
NA12877_chrY	CAT	exon	9583876	9584074	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=exon:NA12877_ch_T0000848:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9584075	9589907	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=intron:NA12877_ch_T0000848:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9589908	9589985	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=exon:NA12877_ch_T0000848:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9589986	9592461	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=intron:NA12877_ch_T0000848:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9592462	9592548	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=exon:NA12877_ch_T0000848:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9592549	9599932	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=intron:NA12877_ch_T0000848:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600081	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=exon:NA12877_ch_T0000848:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600082	9600773	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=intron:NA12877_ch_T0000848:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=exon:NA12877_ch_T0000848:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9603760	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=intron:NA12877_ch_T0000848:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603761	9603839	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=exon:NA12877_ch_T0000848:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9603840	9603959	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=intron:NA12877_ch_T0000848:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=exon:NA12877_ch_T0000848:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=intron:NA12877_ch_T0000848:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9606245	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=NA12877_ch_T0000848;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000848;transcript_name=NA12877_ch_T0000848;gene_name=TTTY2;ID=exon:NA12877_ch_T0000848:7;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9583876	9606056	1000	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=NA12877_ch_T0000849;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000849;gene_name=TTTY2;ID=NA12877_ch_T0000849;Name=TTTY2
NA12877_chrY	CAT	exon	9583876	9584074	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=NA12877_ch_T0000849;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000849;transcript_name=NA12877_ch_T0000849;gene_name=TTTY2;ID=exon:NA12877_ch_T0000849:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9584075	9589907	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=NA12877_ch_T0000849;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000849;transcript_name=NA12877_ch_T0000849;gene_name=TTTY2;ID=intron:NA12877_ch_T0000849:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9589908	9589985	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=NA12877_ch_T0000849;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000849;transcript_name=NA12877_ch_T0000849;gene_name=TTTY2;ID=exon:NA12877_ch_T0000849:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9589986	9599932	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=NA12877_ch_T0000849;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000849;transcript_name=NA12877_ch_T0000849;gene_name=TTTY2;ID=intron:NA12877_ch_T0000849:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600160	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=NA12877_ch_T0000849;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000849;transcript_name=NA12877_ch_T0000849;gene_name=TTTY2;ID=exon:NA12877_ch_T0000849:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600161	9600773	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=NA12877_ch_T0000849;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000849;transcript_name=NA12877_ch_T0000849;gene_name=TTTY2;ID=intron:NA12877_ch_T0000849:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=NA12877_ch_T0000849;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000849;transcript_name=NA12877_ch_T0000849;gene_name=TTTY2;ID=exon:NA12877_ch_T0000849:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9603959	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=NA12877_ch_T0000849;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000849;transcript_name=NA12877_ch_T0000849;gene_name=TTTY2;ID=intron:NA12877_ch_T0000849:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=NA12877_ch_T0000849;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000849;transcript_name=NA12877_ch_T0000849;gene_name=TTTY2;ID=exon:NA12877_ch_T0000849:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=NA12877_ch_T0000849;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000849;transcript_name=NA12877_ch_T0000849;gene_name=TTTY2;ID=intron:NA12877_ch_T0000849:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9606056	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=NA12877_ch_T0000849;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000849;transcript_name=NA12877_ch_T0000849;gene_name=TTTY2;ID=exon:NA12877_ch_T0000849:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9583885	9605525	1000	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=NA12877_ch_T0000850;Name=TTTY2
NA12877_chrY	CAT	exon	9583885	9584074	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=exon:NA12877_ch_T0000850:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9584075	9589907	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=intron:NA12877_ch_T0000850:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9589908	9589985	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=exon:NA12877_ch_T0000850:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9589986	9592461	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=intron:NA12877_ch_T0000850:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9592462	9592548	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=exon:NA12877_ch_T0000850:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9592549	9599932	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=intron:NA12877_ch_T0000850:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600160	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=exon:NA12877_ch_T0000850:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600161	9600773	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=intron:NA12877_ch_T0000850:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=exon:NA12877_ch_T0000850:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9603959	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=intron:NA12877_ch_T0000850:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=exon:NA12877_ch_T0000850:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=intron:NA12877_ch_T0000850:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9605525	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=NA12877_ch_T0000850;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000850;transcript_name=NA12877_ch_T0000850;gene_name=TTTY2;ID=exon:NA12877_ch_T0000850:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9588168	9606060	1000	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=NA12877_ch_T0000851;Name=TTTY2
NA12877_chrY	CAT	exon	9588168	9589985	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=exon:NA12877_ch_T0000851:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9589986	9592461	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=intron:NA12877_ch_T0000851:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9592462	9592548	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=exon:NA12877_ch_T0000851:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9592549	9599932	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=intron:NA12877_ch_T0000851:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600081	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=exon:NA12877_ch_T0000851:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600082	9600773	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=intron:NA12877_ch_T0000851:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=exon:NA12877_ch_T0000851:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9603760	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=intron:NA12877_ch_T0000851:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603761	9603839	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=exon:NA12877_ch_T0000851:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9603840	9603959	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=intron:NA12877_ch_T0000851:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=exon:NA12877_ch_T0000851:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=intron:NA12877_ch_T0000851:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9606060	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=NA12877_ch_T0000851;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000851;transcript_name=NA12877_ch_T0000851;gene_name=TTTY2;ID=exon:NA12877_ch_T0000851:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9597677	9601021	1000	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=NA12877_ch_T0000852;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000852;gene_name=TTTY2;ID=NA12877_ch_T0000852;Name=TTTY2
NA12877_chrY	CAT	exon	9597677	9597820	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=NA12877_ch_T0000852;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000852;transcript_name=NA12877_ch_T0000852;gene_name=TTTY2;ID=exon:NA12877_ch_T0000852:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9597821	9599553	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=NA12877_ch_T0000852;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000852;transcript_name=NA12877_ch_T0000852;gene_name=TTTY2;ID=intron:NA12877_ch_T0000852:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599554	9599640	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=NA12877_ch_T0000852;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000852;transcript_name=NA12877_ch_T0000852;gene_name=TTTY2;ID=exon:NA12877_ch_T0000852:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9599641	9599932	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=NA12877_ch_T0000852;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000852;transcript_name=NA12877_ch_T0000852;gene_name=TTTY2;ID=intron:NA12877_ch_T0000852:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600081	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=NA12877_ch_T0000852;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000852;transcript_name=NA12877_ch_T0000852;gene_name=TTTY2;ID=exon:NA12877_ch_T0000852:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600082	9600773	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=NA12877_ch_T0000852;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000852;transcript_name=NA12877_ch_T0000852;gene_name=TTTY2;ID=intron:NA12877_ch_T0000852:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9601021	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=NA12877_ch_T0000852;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000852;transcript_name=NA12877_ch_T0000852;gene_name=TTTY2;ID=exon:NA12877_ch_T0000852:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9597684	9606245	1000	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=NA12877_ch_T0000853;Name=TTTY2
NA12877_chrY	CAT	exon	9597684	9597820	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=exon:NA12877_ch_T0000853:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9597821	9599553	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=intron:NA12877_ch_T0000853:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599554	9599640	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=exon:NA12877_ch_T0000853:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9599641	9599932	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=intron:NA12877_ch_T0000853:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600081	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=exon:NA12877_ch_T0000853:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600082	9600773	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=intron:NA12877_ch_T0000853:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=exon:NA12877_ch_T0000853:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9601909	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=intron:NA12877_ch_T0000853:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9601910	9602127	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=exon:NA12877_ch_T0000853:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9602128	9603760	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=intron:NA12877_ch_T0000853:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603761	9603839	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=exon:NA12877_ch_T0000853:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9603840	9603959	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=intron:NA12877_ch_T0000853:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=exon:NA12877_ch_T0000853:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=intron:NA12877_ch_T0000853:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9606245	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=NA12877_ch_T0000853;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000853;transcript_name=NA12877_ch_T0000853;gene_name=TTTY2;ID=exon:NA12877_ch_T0000853:7;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9597687	9605527	1000	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=NA12877_ch_T0000854;Name=TTTY2
NA12877_chrY	CAT	exon	9597687	9597814	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=exon:NA12877_ch_T0000854:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9597815	9599553	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=intron:NA12877_ch_T0000854:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599554	9599640	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=exon:NA12877_ch_T0000854:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9599641	9599932	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=intron:NA12877_ch_T0000854:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600081	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=exon:NA12877_ch_T0000854:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600082	9600773	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=intron:NA12877_ch_T0000854:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=exon:NA12877_ch_T0000854:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9603760	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=intron:NA12877_ch_T0000854:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603761	9603839	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=exon:NA12877_ch_T0000854:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9603840	9603959	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=intron:NA12877_ch_T0000854:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=exon:NA12877_ch_T0000854:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=intron:NA12877_ch_T0000854:5;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9605527	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=NA12877_ch_T0000854;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000854;transcript_name=NA12877_ch_T0000854;gene_name=TTTY2;ID=exon:NA12877_ch_T0000854:6;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9597694	9606056	1000	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=NA12877_ch_T0000855;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_G0000274;transcript_name=NA12877_ch_T0000855;gene_name=TTTY2;ID=NA12877_ch_T0000855;Name=TTTY2
NA12877_chrY	CAT	exon	9597694	9597820	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=NA12877_ch_T0000855;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000855;transcript_name=NA12877_ch_T0000855;gene_name=TTTY2;ID=exon:NA12877_ch_T0000855:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9597821	9599932	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=NA12877_ch_T0000855;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000855;transcript_name=NA12877_ch_T0000855;gene_name=TTTY2;ID=intron:NA12877_ch_T0000855:0;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9599933	9600081	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=NA12877_ch_T0000855;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000855;transcript_name=NA12877_ch_T0000855;gene_name=TTTY2;ID=exon:NA12877_ch_T0000855:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600082	9600773	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=NA12877_ch_T0000855;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000855;transcript_name=NA12877_ch_T0000855;gene_name=TTTY2;ID=intron:NA12877_ch_T0000855:1;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9600774	9600930	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=NA12877_ch_T0000855;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000855;transcript_name=NA12877_ch_T0000855;gene_name=TTTY2;ID=exon:NA12877_ch_T0000855:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600931	9603959	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=NA12877_ch_T0000855;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000855;transcript_name=NA12877_ch_T0000855;gene_name=TTTY2;ID=intron:NA12877_ch_T0000855:2;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9603960	9604157	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=NA12877_ch_T0000855;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000855;transcript_name=NA12877_ch_T0000855;gene_name=TTTY2;ID=exon:NA12877_ch_T0000855:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9604158	9605380	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=NA12877_ch_T0000855;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000855;transcript_name=NA12877_ch_T0000855;gene_name=TTTY2;ID=intron:NA12877_ch_T0000855:3;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9605381	9606056	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=NA12877_ch_T0000855;gene_id=NA12877_ch_G0000274;Parent=NA12877_ch_T0000855;transcript_name=NA12877_ch_T0000855;gene_name=TTTY2;ID=exon:NA12877_ch_T0000855:4;Name=TTTY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9600740	9621914	.	-	.	source_gene_common_name=TTTY1;source_gene=ENSG00000129845.6;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;gene_id=NA12877_ch_G0000275;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=NA12877_ch_G0000275;Name=TTTY1
NA12877_chrY	CAT	transcript	9600740	9621874	1000	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=NA12877_ch_T0000856;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_G0000275;transcript_name=NA12877_ch_T0000856;gene_name=TTTY1;ID=NA12877_ch_T0000856;Name=TTTY1
NA12877_chrY	CAT	exon	9600740	9600997	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=NA12877_ch_T0000856;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000856;transcript_name=NA12877_ch_T0000856;gene_name=TTTY1;ID=exon:NA12877_ch_T0000856:0;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9600998	9608578	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=NA12877_ch_T0000856;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000856;transcript_name=NA12877_ch_T0000856;gene_name=TTTY1;ID=intron:NA12877_ch_T0000856:0;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9608579	9608716	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=NA12877_ch_T0000856;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000856;transcript_name=NA12877_ch_T0000856;gene_name=TTTY1;ID=exon:NA12877_ch_T0000856:1;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9608717	9611072	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=NA12877_ch_T0000856;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000856;transcript_name=NA12877_ch_T0000856;gene_name=TTTY1;ID=intron:NA12877_ch_T0000856:1;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9611073	9611181	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=NA12877_ch_T0000856;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000856;transcript_name=NA12877_ch_T0000856;gene_name=TTTY1;ID=exon:NA12877_ch_T0000856:2;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9611182	9618045	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=NA12877_ch_T0000856;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000856;transcript_name=NA12877_ch_T0000856;gene_name=TTTY1;ID=intron:NA12877_ch_T0000856:2;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9618046	9618205	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=NA12877_ch_T0000856;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000856;transcript_name=NA12877_ch_T0000856;gene_name=TTTY1;ID=exon:NA12877_ch_T0000856:3;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9618206	9621629	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=NA12877_ch_T0000856;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000856;transcript_name=NA12877_ch_T0000856;gene_name=TTTY1;ID=intron:NA12877_ch_T0000856:3;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9621630	9621874	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=NA12877_ch_T0000856;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000856;transcript_name=NA12877_ch_T0000856;gene_name=TTTY1;ID=exon:NA12877_ch_T0000856:4;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9606736	9621914	1000	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000805314.1,ENST00000805314.1;transcript_id=NA12877_ch_T0000857;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_G0000275;transcript_name=NA12877_ch_T0000857;gene_name=TTTY1;ID=NA12877_ch_T0000857;Name=TTTY1
NA12877_chrY	CAT	exon	9606736	9606897	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000805314.1,ENST00000805314.1;transcript_id=NA12877_ch_T0000857;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000857;transcript_name=NA12877_ch_T0000857;gene_name=TTTY1;ID=exon:NA12877_ch_T0000857:0;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9606898	9611022	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000805314.1,ENST00000805314.1;transcript_id=NA12877_ch_T0000857;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000857;transcript_name=NA12877_ch_T0000857;gene_name=TTTY1;ID=intron:NA12877_ch_T0000857:0;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9611023	9611181	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000805314.1,ENST00000805314.1;transcript_id=NA12877_ch_T0000857;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000857;transcript_name=NA12877_ch_T0000857;gene_name=TTTY1;ID=exon:NA12877_ch_T0000857:1;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9611182	9621629	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000805314.1,ENST00000805314.1;transcript_id=NA12877_ch_T0000857;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000857;transcript_name=NA12877_ch_T0000857;gene_name=TTTY1;ID=intron:NA12877_ch_T0000857:1;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9621630	9621914	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000805314.1,ENST00000805314.1;transcript_id=NA12877_ch_T0000857;gene_id=NA12877_ch_G0000275;Parent=NA12877_ch_T0000857;transcript_name=NA12877_ch_T0000857;gene_name=TTTY1;ID=exon:NA12877_ch_T0000857:2;Name=TTTY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9631957	9681474	.	+	.	source_gene_common_name=TTTY22;source_gene=ENSG00000224075.2;gene_id=NA12877_ch_G0000276;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=NA12877_ch_G0000276;Name=TTTY22
NA12877_chrY	CAT	transcript	9631957	9681474	1000	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_G0000276;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=NA12877_ch_T0000858;Name=TTTY22
NA12877_chrY	CAT	exon	9631957	9632162	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=exon:NA12877_ch_T0000858:0;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9632163	9634880	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=intron:NA12877_ch_T0000858:0;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9634881	9635036	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=exon:NA12877_ch_T0000858:1;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9635037	9642472	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=intron:NA12877_ch_T0000858:1;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9642473	9642553	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=exon:NA12877_ch_T0000858:2;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9642554	9642929	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=intron:NA12877_ch_T0000858:2;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9642930	9643002	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=exon:NA12877_ch_T0000858:3;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9643003	9645543	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=intron:NA12877_ch_T0000858:3;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9645544	9645796	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=exon:NA12877_ch_T0000858:4;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9645797	9652356	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=intron:NA12877_ch_T0000858:4;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9652357	9652468	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=exon:NA12877_ch_T0000858:5;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9652469	9656893	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=intron:NA12877_ch_T0000858:5;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9656894	9656968	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=exon:NA12877_ch_T0000858:6;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9656969	9657653	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=intron:NA12877_ch_T0000858:6;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9657654	9657692	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=exon:NA12877_ch_T0000858:7;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9657693	9660868	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=intron:NA12877_ch_T0000858:7;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9660869	9660983	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=exon:NA12877_ch_T0000858:8;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9660984	9674572	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=intron:NA12877_ch_T0000858:8;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9674573	9674741	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=exon:NA12877_ch_T0000858:9;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9674742	9679012	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=intron:NA12877_ch_T0000858:9;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9679013	9679185	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=exon:NA12877_ch_T0000858:10;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9679186	9681335	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=intron:NA12877_ch_T0000858:10;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9681336	9681474	.	+	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000858;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000858;transcript_name=NA12877_ch_T0000858;gene_name=TTTY22;ID=exon:NA12877_ch_T0000858:11;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9648738	9660828	1000	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000859;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_G0000276;transcript_name=NA12877_ch_T0000859;gene_name=TTTY22;ID=NA12877_ch_T0000859;Name=TTTY22
NA12877_chrY	CAT	exon	9648738	9648892	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000859;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000859;transcript_name=NA12877_ch_T0000859;gene_name=TTTY22;ID=exon:NA12877_ch_T0000859:0;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9648893	9652356	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000859;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000859;transcript_name=NA12877_ch_T0000859;gene_name=TTTY22;ID=intron:NA12877_ch_T0000859:0;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9652357	9652468	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000859;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000859;transcript_name=NA12877_ch_T0000859;gene_name=TTTY22;ID=exon:NA12877_ch_T0000859:1;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9652469	9656893	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000859;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000859;transcript_name=NA12877_ch_T0000859;gene_name=TTTY22;ID=intron:NA12877_ch_T0000859:1;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9656894	9656968	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000859;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000859;transcript_name=NA12877_ch_T0000859;gene_name=TTTY22;ID=exon:NA12877_ch_T0000859:2;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9656969	9657653	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000859;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000859;transcript_name=NA12877_ch_T0000859;gene_name=TTTY22;ID=intron:NA12877_ch_T0000859:2;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9657654	9657692	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000859;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000859;transcript_name=NA12877_ch_T0000859;gene_name=TTTY22;ID=exon:NA12877_ch_T0000859:3;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9657693	9660782	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000859;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000859;transcript_name=NA12877_ch_T0000859;gene_name=TTTY22;ID=intron:NA12877_ch_T0000859:3;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9660783	9660828	.	+	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=NA12877_ch_T0000859;gene_id=NA12877_ch_G0000276;Parent=NA12877_ch_T0000859;transcript_name=NA12877_ch_T0000859;gene_name=TTTY22;ID=exon:NA12877_ch_T0000859:4;Name=TTTY22;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9660898	9665092	.	+	.	source_gene_common_name=ENSG00000228379;source_gene=ENSG00000228379.1;gene_id=NA12877_ch_G0000277;gene_biotype=lncRNA;gene_name=ENSG00000228379;gene_sources=liftoff;ID=NA12877_ch_G0000277;Name=ENSG00000228379
NA12877_chrY	CAT	transcript	9660898	9665092	1000	+	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=NA12877_ch_T0000860;gene_id=NA12877_ch_G0000277;Parent=NA12877_ch_G0000277;transcript_name=NA12877_ch_T0000860;gene_name=ENSG00000228379;ID=NA12877_ch_T0000860;Name=ENSG00000228379
NA12877_chrY	CAT	exon	9660898	9660983	.	+	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=NA12877_ch_T0000860;gene_id=NA12877_ch_G0000277;Parent=NA12877_ch_T0000860;transcript_name=NA12877_ch_T0000860;gene_name=ENSG00000228379;ID=exon:NA12877_ch_T0000860:0;Name=ENSG00000228379;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9660984	9663484	.	+	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=NA12877_ch_T0000860;gene_id=NA12877_ch_G0000277;Parent=NA12877_ch_T0000860;transcript_name=NA12877_ch_T0000860;gene_name=ENSG00000228379;ID=intron:NA12877_ch_T0000860:0;Name=ENSG00000228379;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9663485	9663627	.	+	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=NA12877_ch_T0000860;gene_id=NA12877_ch_G0000277;Parent=NA12877_ch_T0000860;transcript_name=NA12877_ch_T0000860;gene_name=ENSG00000228379;ID=exon:NA12877_ch_T0000860:1;Name=ENSG00000228379;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9663628	9664873	.	+	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=NA12877_ch_T0000860;gene_id=NA12877_ch_G0000277;Parent=NA12877_ch_T0000860;transcript_name=NA12877_ch_T0000860;gene_name=ENSG00000228379;ID=intron:NA12877_ch_T0000860:1;Name=ENSG00000228379;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9664874	9665092	.	+	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=NA12877_ch_T0000860;gene_id=NA12877_ch_G0000277;Parent=NA12877_ch_T0000860;transcript_name=NA12877_ch_T0000860;gene_name=ENSG00000228379;ID=exon:NA12877_ch_T0000860:2;Name=ENSG00000228379;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9678657	9706126	.	-	.	source_gene_common_name=ENSG00000310196;source_gene=ENSG00000310196.1;gene_id=NA12877_ch_G0000278;gene_biotype=lncRNA;gene_name=ENSG00000310196;gene_sources=liftoff;ID=NA12877_ch_G0000278;Name=ENSG00000310196
NA12877_chrY	CAT	transcript	9678657	9706126	1000	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=NA12877_ch_T0000861;gene_id=NA12877_ch_G0000278;Parent=NA12877_ch_G0000278;transcript_name=NA12877_ch_T0000861;gene_name=ENSG00000310196;ID=NA12877_ch_T0000861;Name=ENSG00000310196
NA12877_chrY	CAT	exon	9678657	9679298	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=NA12877_ch_T0000861;gene_id=NA12877_ch_G0000278;Parent=NA12877_ch_T0000861;transcript_name=NA12877_ch_T0000861;gene_name=ENSG00000310196;ID=exon:NA12877_ch_T0000861:0;Name=ENSG00000310196;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9679299	9679707	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=NA12877_ch_T0000861;gene_id=NA12877_ch_G0000278;Parent=NA12877_ch_T0000861;transcript_name=NA12877_ch_T0000861;gene_name=ENSG00000310196;ID=intron:NA12877_ch_T0000861:0;Name=ENSG00000310196;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9679708	9679789	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=NA12877_ch_T0000861;gene_id=NA12877_ch_G0000278;Parent=NA12877_ch_T0000861;transcript_name=NA12877_ch_T0000861;gene_name=ENSG00000310196;ID=exon:NA12877_ch_T0000861:1;Name=ENSG00000310196;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9679790	9683425	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=NA12877_ch_T0000861;gene_id=NA12877_ch_G0000278;Parent=NA12877_ch_T0000861;transcript_name=NA12877_ch_T0000861;gene_name=ENSG00000310196;ID=intron:NA12877_ch_T0000861:1;Name=ENSG00000310196;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9683426	9683575	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=NA12877_ch_T0000861;gene_id=NA12877_ch_G0000278;Parent=NA12877_ch_T0000861;transcript_name=NA12877_ch_T0000861;gene_name=ENSG00000310196;ID=exon:NA12877_ch_T0000861:2;Name=ENSG00000310196;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9683576	9705647	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=NA12877_ch_T0000861;gene_id=NA12877_ch_G0000278;Parent=NA12877_ch_T0000861;transcript_name=NA12877_ch_T0000861;gene_name=ENSG00000310196;ID=intron:NA12877_ch_T0000861:2;Name=ENSG00000310196;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9705648	9706126	.	-	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=NA12877_ch_T0000861;gene_id=NA12877_ch_G0000278;Parent=NA12877_ch_T0000861;transcript_name=NA12877_ch_T0000861;gene_name=ENSG00000310196;ID=exon:NA12877_ch_T0000861:3;Name=ENSG00000310196;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9678997	9694275	.	-	.	source_gene_common_name=RBMY2NP;source_gene=ENSG00000229208.1;gene_id=NA12877_ch_G0000279;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2NP;gene_sources=liftoff;ID=NA12877_ch_G0000279;Name=RBMY2NP
NA12877_chrY	CAT	transcript	9678997	9694275	1000	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_G0000279;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=NA12877_ch_T0000862;Name=RBMY2NP
NA12877_chrY	CAT	exon	9678997	9679298	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=exon:NA12877_ch_T0000862:0;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9679299	9679713	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=intron:NA12877_ch_T0000862:0;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9679714	9679789	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=exon:NA12877_ch_T0000862:1;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9679790	9679899	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=intron:NA12877_ch_T0000862:1;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9679900	9680010	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=exon:NA12877_ch_T0000862:2;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9680011	9680407	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=intron:NA12877_ch_T0000862:2;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9680408	9680518	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=exon:NA12877_ch_T0000862:3;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9680519	9681325	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=intron:NA12877_ch_T0000862:3;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9681326	9681425	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=exon:NA12877_ch_T0000862:4;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9681426	9683425	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=intron:NA12877_ch_T0000862:4;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9683426	9683575	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=exon:NA12877_ch_T0000862:5;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9683576	9694097	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=intron:NA12877_ch_T0000862:5;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9694098	9694275	.	-	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=NA12877_ch_T0000862;gene_id=NA12877_ch_G0000279;Parent=NA12877_ch_T0000862;transcript_name=NA12877_ch_T0000862;gene_name=RBMY2NP;ID=exon:NA12877_ch_T0000862:6;Name=RBMY2NP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9716037	9716277	.	-	.	source_gene_common_name=ENSG00000274445;source_gene=ENSG00000274445.1;alternative_source_transcripts=ENST00000612764.1,ENST00000612764.1;gene_id=NA12877_ch_G0000280;gene_biotype=processed_pseudogene;gene_name=ENSG00000274445;gene_sources=liftoff;ID=NA12877_ch_G0000280;Name=ENSG00000274445
NA12877_chrY	CAT	transcript	9716037	9716277	1000	-	.	source_transcript=ENST00000612764.1;source_transcript_name=ENST00000612764;source_gene=ENSG00000274445.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274445.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000612764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612764.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274445;alternative_source_transcripts=ENST00000612764.1,ENST00000612764.1;transcript_id=NA12877_ch_T0000863;gene_id=NA12877_ch_G0000280;Parent=NA12877_ch_G0000280;transcript_name=NA12877_ch_T0000863;gene_name=ENSG00000274445;ID=NA12877_ch_T0000863;Name=ENSG00000274445
NA12877_chrY	CAT	exon	9716037	9716277	.	-	.	source_transcript=ENST00000612764.1;source_transcript_name=ENST00000612764;source_gene=ENSG00000274445.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274445.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000612764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612764.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274445;alternative_source_transcripts=ENST00000612764.1,ENST00000612764.1;transcript_id=NA12877_ch_T0000863;gene_id=NA12877_ch_G0000280;Parent=NA12877_ch_T0000863;transcript_name=NA12877_ch_T0000863;gene_name=ENSG00000274445;ID=exon:NA12877_ch_T0000863:0;Name=ENSG00000274445;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9717239	9718356	.	+	.	source_gene_common_name=TSPY18P;source_gene=ENSG00000231874.3;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;gene_id=NA12877_ch_G0000281;gene_biotype=unprocessed_pseudogene;gene_name=TSPY18P;gene_sources=liftoff;ID=NA12877_ch_G0000281;Name=TSPY18P
NA12877_chrY	CAT	transcript	9717239	9718356	1000	+	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=NA12877_ch_T0000864;gene_id=NA12877_ch_G0000281;Parent=NA12877_ch_G0000281;transcript_name=NA12877_ch_T0000864;gene_name=TSPY18P;ID=NA12877_ch_T0000864;Name=TSPY18P
NA12877_chrY	CAT	exon	9717239	9717714	.	+	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=NA12877_ch_T0000864;gene_id=NA12877_ch_G0000281;Parent=NA12877_ch_T0000864;transcript_name=NA12877_ch_T0000864;gene_name=TSPY18P;ID=exon:NA12877_ch_T0000864:0;Name=TSPY18P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9717715	9718323	.	+	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=NA12877_ch_T0000864;gene_id=NA12877_ch_G0000281;Parent=NA12877_ch_T0000864;transcript_name=NA12877_ch_T0000864;gene_name=TSPY18P;ID=intron:NA12877_ch_T0000864:0;Name=TSPY18P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9718324	9718356	.	+	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=NA12877_ch_T0000864;gene_id=NA12877_ch_G0000281;Parent=NA12877_ch_T0000864;transcript_name=NA12877_ch_T0000864;gene_name=TSPY18P;ID=exon:NA12877_ch_T0000864:1;Name=TSPY18P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9746361	9755712	.	-	.	source_gene_common_name=ENSG00000309435;source_gene=ENSG00000309435.1;gene_id=NA12877_ch_G0000282;gene_biotype=lncRNA;gene_name=ENSG00000309435;gene_sources=liftoff;ID=NA12877_ch_G0000282;Name=ENSG00000309435
NA12877_chrY	CAT	transcript	9746361	9755705	1000	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_G0000282;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=NA12877_ch_T0000865;Name=ENSG00000309435
NA12877_chrY	CAT	exon	9746361	9747699	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000865:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9747700	9751657	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000865:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9751658	9751753	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000865:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9751754	9753175	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000865:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753176	9753189	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000865:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753190	9753842	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000865:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753843	9753965	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000865:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753966	9754314	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000865:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754315	9754425	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000865:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754426	9754553	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000865:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754554	9754631	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000865:5;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754632	9755237	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000865:5;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9755238	9755705	.	-	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000865;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000865;transcript_name=NA12877_ch_T0000865;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000865:6;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9747071	9755686	1000	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_G0000282;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=NA12877_ch_T0000866;Name=ENSG00000309435
NA12877_chrY	CAT	exon	9747071	9747699	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000866:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9747700	9751657	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000866:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9751658	9751753	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000866:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9751754	9753175	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000866:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753176	9753189	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000866:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753190	9753842	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000866:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753843	9753965	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000866:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753966	9754314	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000866:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754315	9754425	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000866:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754426	9754553	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000866:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754554	9754674	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000866:5;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754675	9754961	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000866:5;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754962	9755204	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000866:6;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9755205	9755627	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000866:6;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9755628	9755686	.	-	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000866;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000866;transcript_name=NA12877_ch_T0000866;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000866:7;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9747084	9755705	1000	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000867;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_G0000282;transcript_name=NA12877_ch_T0000867;gene_name=ENSG00000309435;ID=NA12877_ch_T0000867;Name=ENSG00000309435
NA12877_chrY	CAT	exon	9747084	9747699	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000867;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000867;transcript_name=NA12877_ch_T0000867;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000867:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9747700	9754314	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000867;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000867;transcript_name=NA12877_ch_T0000867;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000867:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754315	9754425	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000867;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000867;transcript_name=NA12877_ch_T0000867;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000867:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754426	9754961	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000867;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000867;transcript_name=NA12877_ch_T0000867;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000867:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754962	9755204	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000867;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000867;transcript_name=NA12877_ch_T0000867;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000867:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9755205	9755627	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000867;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000867;transcript_name=NA12877_ch_T0000867;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000867:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9755628	9755705	.	-	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000867;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000867;transcript_name=NA12877_ch_T0000867;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000867:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9747084	9755697	1000	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_G0000282;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=NA12877_ch_T0000868;Name=ENSG00000309435
NA12877_chrY	CAT	exon	9747084	9747699	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000868:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9747700	9751518	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000868:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9751519	9751772	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000868:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9751773	9753175	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000868:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753176	9753189	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000868:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753190	9753842	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000868:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753843	9753965	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000868:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753966	9754314	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000868:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754315	9754425	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000868:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754426	9754553	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000868:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754554	9754613	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000868:5;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754614	9754961	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000868:5;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754962	9755204	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000868:6;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9755205	9755627	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000868:6;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9755628	9755697	.	-	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000868;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000868;transcript_name=NA12877_ch_T0000868;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000868:7;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9747084	9755084	1000	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000869;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_G0000282;transcript_name=NA12877_ch_T0000869;gene_name=ENSG00000309435;ID=NA12877_ch_T0000869;Name=ENSG00000309435
NA12877_chrY	CAT	exon	9747084	9747699	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000869;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000869;transcript_name=NA12877_ch_T0000869;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000869:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9747700	9754314	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000869;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000869;transcript_name=NA12877_ch_T0000869;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000869:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754315	9754425	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000869;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000869;transcript_name=NA12877_ch_T0000869;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000869:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754426	9754553	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000869;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000869;transcript_name=NA12877_ch_T0000869;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000869:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754554	9754613	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000869;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000869;transcript_name=NA12877_ch_T0000869;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000869:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754614	9754961	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000869;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000869;transcript_name=NA12877_ch_T0000869;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000869:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754962	9755084	.	-	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000869;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000869;transcript_name=NA12877_ch_T0000869;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000869:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9747084	9755712	1000	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_G0000282;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=NA12877_ch_T0000870;Name=ENSG00000309435
NA12877_chrY	CAT	exon	9747084	9747699	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000870:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9747700	9751657	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000870:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9751658	9751753	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000870:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9751754	9753175	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000870:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753176	9753189	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000870:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753190	9753842	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000870:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753843	9753965	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000870:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753966	9754314	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000870:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754315	9754425	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000870:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754426	9754553	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000870:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754554	9754613	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000870:5;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754614	9754961	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000870:5;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754962	9755204	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000870:6;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9755205	9755627	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000870:6;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9755628	9755712	.	-	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000870;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000870;transcript_name=NA12877_ch_T0000870;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000870:7;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9747084	9755665	1000	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000871;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_G0000282;transcript_name=NA12877_ch_T0000871;gene_name=ENSG00000309435;ID=NA12877_ch_T0000871;Name=ENSG00000309435
NA12877_chrY	CAT	exon	9747084	9747699	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000871;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000871;transcript_name=NA12877_ch_T0000871;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000871:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9747700	9754314	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000871;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000871;transcript_name=NA12877_ch_T0000871;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000871:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754315	9754425	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000871;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000871;transcript_name=NA12877_ch_T0000871;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000871:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754426	9754553	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000871;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000871;transcript_name=NA12877_ch_T0000871;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000871:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754554	9754631	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000871;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000871;transcript_name=NA12877_ch_T0000871;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000871:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754632	9755237	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000871;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000871;transcript_name=NA12877_ch_T0000871;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000871:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9755238	9755665	.	-	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000871;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000871;transcript_name=NA12877_ch_T0000871;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000871:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9747084	9755686	1000	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_G0000282;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=NA12877_ch_T0000872;Name=ENSG00000309435
NA12877_chrY	CAT	exon	9747084	9747699	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000872:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9747700	9751657	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000872:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9751658	9751753	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000872:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9751754	9753175	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000872:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753176	9753189	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000872:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753190	9753842	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000872:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753843	9753965	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000872:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753966	9754314	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000872:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754315	9754425	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000872:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754426	9754961	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000872:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754962	9755204	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000872:5;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9755205	9755627	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000872:5;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9755628	9755686	.	-	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000872;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000872;transcript_name=NA12877_ch_T0000872;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000872:6;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9751202	9755679	1000	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_G0000282;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=NA12877_ch_T0000874;Name=ENSG00000309435
NA12877_chrY	CAT	exon	9751202	9751753	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000874:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9751754	9753175	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000874:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753176	9753189	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000874:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753190	9753842	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000874:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753843	9753965	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000874:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753966	9754314	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000874:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754315	9754425	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000874:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754426	9754553	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000874:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754554	9754613	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000874:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754614	9754961	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000874:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754962	9755204	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000874:5;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9755205	9755627	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000874:5;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9755628	9755679	.	-	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000874;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000874;transcript_name=NA12877_ch_T0000874;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000874:6;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9752637	9755703	1000	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000875;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_G0000282;transcript_name=NA12877_ch_T0000875;gene_name=ENSG00000309435;ID=NA12877_ch_T0000875;Name=ENSG00000309435
NA12877_chrY	CAT	exon	9752637	9753189	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000875;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000875;transcript_name=NA12877_ch_T0000875;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000875:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753190	9754314	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000875;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000875;transcript_name=NA12877_ch_T0000875;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000875:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754315	9754425	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000875;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000875;transcript_name=NA12877_ch_T0000875;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000875:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754426	9754553	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000875;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000875;transcript_name=NA12877_ch_T0000875;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000875:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754554	9754613	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000875;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000875;transcript_name=NA12877_ch_T0000875;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000875:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754614	9754961	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000875;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000875;transcript_name=NA12877_ch_T0000875;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000875:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754962	9755204	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000875;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000875;transcript_name=NA12877_ch_T0000875;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000875:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9755205	9755627	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000875;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000875;transcript_name=NA12877_ch_T0000875;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000875:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9755628	9755703	.	-	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000875;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000875;transcript_name=NA12877_ch_T0000875;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000875:4;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9752638	9755688	1000	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000876;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_G0000282;transcript_name=NA12877_ch_T0000876;gene_name=ENSG00000309435;ID=NA12877_ch_T0000876;Name=ENSG00000309435
NA12877_chrY	CAT	exon	9752638	9753189	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000876;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000876;transcript_name=NA12877_ch_T0000876;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000876:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753190	9754314	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000876;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000876;transcript_name=NA12877_ch_T0000876;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000876:0;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754315	9754425	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000876;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000876;transcript_name=NA12877_ch_T0000876;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000876:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754426	9754961	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000876;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000876;transcript_name=NA12877_ch_T0000876;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000876:1;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754962	9755204	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000876;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000876;transcript_name=NA12877_ch_T0000876;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000876:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9755205	9755627	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000876;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000876;transcript_name=NA12877_ch_T0000876;gene_name=ENSG00000309435;ID=intron:NA12877_ch_T0000876:2;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9755628	9755688	.	-	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=NA12877_ch_T0000876;gene_id=NA12877_ch_G0000282;Parent=NA12877_ch_T0000876;transcript_name=NA12877_ch_T0000876;gene_name=ENSG00000309435;ID=exon:NA12877_ch_T0000876:3;Name=ENSG00000309435;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9748234	9748720	.	+	.	source_gene_common_name=ENSG00000275352;source_gene=ENSG00000275352.1;gene_id=NA12877_ch_G0000283;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000275352;gene_sources=liftoff;ID=NA12877_ch_G0000283;Name=ENSG00000275352
NA12877_chrY	CAT	transcript	9748234	9748720	1000	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=NA12877_ch_T0000873;gene_id=NA12877_ch_G0000283;Parent=NA12877_ch_G0000283;transcript_name=NA12877_ch_T0000873;gene_name=ENSG00000275352;ID=NA12877_ch_T0000873;Name=ENSG00000275352
NA12877_chrY	CAT	exon	9748234	9748297	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=NA12877_ch_T0000873;gene_id=NA12877_ch_G0000283;Parent=NA12877_ch_T0000873;transcript_name=NA12877_ch_T0000873;gene_name=ENSG00000275352;ID=exon:NA12877_ch_T0000873:0;Name=ENSG00000275352;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9748298	9748386	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=NA12877_ch_T0000873;gene_id=NA12877_ch_G0000283;Parent=NA12877_ch_T0000873;transcript_name=NA12877_ch_T0000873;gene_name=ENSG00000275352;ID=intron:NA12877_ch_T0000873:0;Name=ENSG00000275352;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9748387	9748531	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=NA12877_ch_T0000873;gene_id=NA12877_ch_G0000283;Parent=NA12877_ch_T0000873;transcript_name=NA12877_ch_T0000873;gene_name=ENSG00000275352;ID=exon:NA12877_ch_T0000873:1;Name=ENSG00000275352;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9748532	9748637	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=NA12877_ch_T0000873;gene_id=NA12877_ch_G0000283;Parent=NA12877_ch_T0000873;transcript_name=NA12877_ch_T0000873;gene_name=ENSG00000275352;ID=intron:NA12877_ch_T0000873:1;Name=ENSG00000275352;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9748638	9748720	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=NA12877_ch_T0000873;gene_id=NA12877_ch_G0000283;Parent=NA12877_ch_T0000873;transcript_name=NA12877_ch_T0000873;gene_name=ENSG00000275352;ID=exon:NA12877_ch_T0000873:2;Name=ENSG00000275352;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9753170	9755714	.	-	.	source_gene_common_name=TSPY13P;source_gene=ENSG00000187657.6;gene_id=NA12877_ch_G0000284;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY13P;gene_sources=liftoff;ID=NA12877_ch_G0000284;Name=TSPY13P
NA12877_chrY	CAT	transcript	9753170	9755714	1000	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=NA12877_ch_T0000877;gene_id=NA12877_ch_G0000284;Parent=NA12877_ch_G0000284;transcript_name=NA12877_ch_T0000877;gene_name=TSPY13P;ID=NA12877_ch_T0000877;Name=TSPY13P
NA12877_chrY	CAT	exon	9753170	9753189	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=NA12877_ch_T0000877;gene_id=NA12877_ch_G0000284;Parent=NA12877_ch_T0000877;transcript_name=NA12877_ch_T0000877;gene_name=TSPY13P;ID=exon:NA12877_ch_T0000877:0;Name=TSPY13P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753190	9753878	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=NA12877_ch_T0000877;gene_id=NA12877_ch_G0000284;Parent=NA12877_ch_T0000877;transcript_name=NA12877_ch_T0000877;gene_name=TSPY13P;ID=intron:NA12877_ch_T0000877:0;Name=TSPY13P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9753879	9753963	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=NA12877_ch_T0000877;gene_id=NA12877_ch_G0000284;Parent=NA12877_ch_T0000877;transcript_name=NA12877_ch_T0000877;gene_name=TSPY13P;ID=exon:NA12877_ch_T0000877:1;Name=TSPY13P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9753964	9754072	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=NA12877_ch_T0000877;gene_id=NA12877_ch_G0000284;Parent=NA12877_ch_T0000877;transcript_name=NA12877_ch_T0000877;gene_name=TSPY13P;ID=intron:NA12877_ch_T0000877:1;Name=TSPY13P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754073	9754215	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=NA12877_ch_T0000877;gene_id=NA12877_ch_G0000284;Parent=NA12877_ch_T0000877;transcript_name=NA12877_ch_T0000877;gene_name=TSPY13P;ID=exon:NA12877_ch_T0000877:2;Name=TSPY13P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754216	9754314	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=NA12877_ch_T0000877;gene_id=NA12877_ch_G0000284;Parent=NA12877_ch_T0000877;transcript_name=NA12877_ch_T0000877;gene_name=TSPY13P;ID=intron:NA12877_ch_T0000877:2;Name=TSPY13P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754315	9754425	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=NA12877_ch_T0000877;gene_id=NA12877_ch_G0000284;Parent=NA12877_ch_T0000877;transcript_name=NA12877_ch_T0000877;gene_name=TSPY13P;ID=exon:NA12877_ch_T0000877:3;Name=TSPY13P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754426	9754553	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=NA12877_ch_T0000877;gene_id=NA12877_ch_G0000284;Parent=NA12877_ch_T0000877;transcript_name=NA12877_ch_T0000877;gene_name=TSPY13P;ID=intron:NA12877_ch_T0000877:3;Name=TSPY13P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9754554	9754631	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=NA12877_ch_T0000877;gene_id=NA12877_ch_G0000284;Parent=NA12877_ch_T0000877;transcript_name=NA12877_ch_T0000877;gene_name=TSPY13P;ID=exon:NA12877_ch_T0000877:4;Name=TSPY13P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9754632	9755237	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=NA12877_ch_T0000877;gene_id=NA12877_ch_G0000284;Parent=NA12877_ch_T0000877;transcript_name=NA12877_ch_T0000877;gene_name=TSPY13P;ID=intron:NA12877_ch_T0000877:4;Name=TSPY13P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9755238	9755714	.	-	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=NA12877_ch_T0000877;gene_id=NA12877_ch_G0000284;Parent=NA12877_ch_T0000877;transcript_name=NA12877_ch_T0000877;gene_name=TSPY13P;ID=exon:NA12877_ch_T0000877:5;Name=TSPY13P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9755896	9760717	.	+	.	source_gene_common_name=TTTY23;source_gene=ENSG00000239225.2;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;gene_id=NA12877_ch_G0000285;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=NA12877_ch_G0000285;Name=TTTY23
NA12877_chrY	CAT	transcript	9755896	9760717	1000	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_G0000285;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=NA12877_ch_T0000878;Name=TTTY23
NA12877_chrY	CAT	exon	9755896	9756077	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=exon:NA12877_ch_T0000878:0;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9756078	9758021	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=intron:NA12877_ch_T0000878:0;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9758022	9758144	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=exon:NA12877_ch_T0000878:1;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9758145	9758339	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=intron:NA12877_ch_T0000878:1;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9758340	9758429	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=exon:NA12877_ch_T0000878:2;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9758430	9758542	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=intron:NA12877_ch_T0000878:2;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9758543	9758688	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=exon:NA12877_ch_T0000878:3;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9758689	9759228	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=intron:NA12877_ch_T0000878:3;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9759229	9759281	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=exon:NA12877_ch_T0000878:4;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9759282	9759461	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=intron:NA12877_ch_T0000878:4;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9759462	9759569	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=exon:NA12877_ch_T0000878:5;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9759570	9760121	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=intron:NA12877_ch_T0000878:5;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9760122	9760717	.	+	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728297.1,ENST00000728297.1;transcript_id=NA12877_ch_T0000878;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000878;transcript_name=NA12877_ch_T0000878;gene_name=TTTY23;ID=exon:NA12877_ch_T0000878:6;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9755914	9760540	1000	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=NA12877_ch_T0000879;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_G0000285;transcript_name=NA12877_ch_T0000879;gene_name=TTTY23;ID=NA12877_ch_T0000879;Name=TTTY23
NA12877_chrY	CAT	exon	9755914	9756077	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=NA12877_ch_T0000879;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000879;transcript_name=NA12877_ch_T0000879;gene_name=TTTY23;ID=exon:NA12877_ch_T0000879:0;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9756078	9758021	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=NA12877_ch_T0000879;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000879;transcript_name=NA12877_ch_T0000879;gene_name=TTTY23;ID=intron:NA12877_ch_T0000879:0;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9758022	9758144	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=NA12877_ch_T0000879;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000879;transcript_name=NA12877_ch_T0000879;gene_name=TTTY23;ID=exon:NA12877_ch_T0000879:1;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9758145	9758339	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=NA12877_ch_T0000879;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000879;transcript_name=NA12877_ch_T0000879;gene_name=TTTY23;ID=intron:NA12877_ch_T0000879:1;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9758340	9758429	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=NA12877_ch_T0000879;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000879;transcript_name=NA12877_ch_T0000879;gene_name=TTTY23;ID=exon:NA12877_ch_T0000879:2;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9758430	9758542	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=NA12877_ch_T0000879;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000879;transcript_name=NA12877_ch_T0000879;gene_name=TTTY23;ID=intron:NA12877_ch_T0000879:2;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9758543	9758688	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=NA12877_ch_T0000879;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000879;transcript_name=NA12877_ch_T0000879;gene_name=TTTY23;ID=exon:NA12877_ch_T0000879:3;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9758689	9759461	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=NA12877_ch_T0000879;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000879;transcript_name=NA12877_ch_T0000879;gene_name=TTTY23;ID=intron:NA12877_ch_T0000879:3;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9759462	9759569	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=NA12877_ch_T0000879;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000879;transcript_name=NA12877_ch_T0000879;gene_name=TTTY23;ID=exon:NA12877_ch_T0000879:4;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9759570	9760121	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=NA12877_ch_T0000879;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000879;transcript_name=NA12877_ch_T0000879;gene_name=TTTY23;ID=intron:NA12877_ch_T0000879:4;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9760122	9760540	.	+	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728298.1,ENST00000728298.1;transcript_id=NA12877_ch_T0000879;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000879;transcript_name=NA12877_ch_T0000879;gene_name=TTTY23;ID=exon:NA12877_ch_T0000879:5;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9755914	9760540	1000	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=NA12877_ch_T0000880;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_G0000285;transcript_name=NA12877_ch_T0000880;gene_name=TTTY23;ID=NA12877_ch_T0000880;Name=TTTY23
NA12877_chrY	CAT	exon	9755914	9756077	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=NA12877_ch_T0000880;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000880;transcript_name=NA12877_ch_T0000880;gene_name=TTTY23;ID=exon:NA12877_ch_T0000880:0;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9756078	9758339	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=NA12877_ch_T0000880;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000880;transcript_name=NA12877_ch_T0000880;gene_name=TTTY23;ID=intron:NA12877_ch_T0000880:0;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9758340	9758429	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=NA12877_ch_T0000880;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000880;transcript_name=NA12877_ch_T0000880;gene_name=TTTY23;ID=exon:NA12877_ch_T0000880:1;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9758430	9758542	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=NA12877_ch_T0000880;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000880;transcript_name=NA12877_ch_T0000880;gene_name=TTTY23;ID=intron:NA12877_ch_T0000880:1;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9758543	9758688	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=NA12877_ch_T0000880;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000880;transcript_name=NA12877_ch_T0000880;gene_name=TTTY23;ID=exon:NA12877_ch_T0000880:2;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9758689	9759461	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=NA12877_ch_T0000880;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000880;transcript_name=NA12877_ch_T0000880;gene_name=TTTY23;ID=intron:NA12877_ch_T0000880:2;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9759462	9759569	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=NA12877_ch_T0000880;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000880;transcript_name=NA12877_ch_T0000880;gene_name=TTTY23;ID=exon:NA12877_ch_T0000880:3;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9759570	9760121	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=NA12877_ch_T0000880;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000880;transcript_name=NA12877_ch_T0000880;gene_name=TTTY23;ID=intron:NA12877_ch_T0000880:3;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9760122	9760540	.	+	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000728299.1,ENST00000728299.1;transcript_id=NA12877_ch_T0000880;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000880;transcript_name=NA12877_ch_T0000880;gene_name=TTTY23;ID=exon:NA12877_ch_T0000880:4;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9758373	9759537	1000	+	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000452889.1,ENST00000452889.1;transcript_id=NA12877_ch_T0000881;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_G0000285;transcript_name=NA12877_ch_T0000881;gene_name=TTTY23;ID=NA12877_ch_T0000881;Name=TTTY23
NA12877_chrY	CAT	exon	9758373	9758429	.	+	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000452889.1,ENST00000452889.1;transcript_id=NA12877_ch_T0000881;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000881;transcript_name=NA12877_ch_T0000881;gene_name=TTTY23;ID=exon:NA12877_ch_T0000881:0;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9758430	9758542	.	+	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000452889.1,ENST00000452889.1;transcript_id=NA12877_ch_T0000881;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000881;transcript_name=NA12877_ch_T0000881;gene_name=TTTY23;ID=intron:NA12877_ch_T0000881:0;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9758543	9758688	.	+	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000452889.1,ENST00000452889.1;transcript_id=NA12877_ch_T0000881;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000881;transcript_name=NA12877_ch_T0000881;gene_name=TTTY23;ID=exon:NA12877_ch_T0000881:1;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9758689	9759228	.	+	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000452889.1,ENST00000452889.1;transcript_id=NA12877_ch_T0000881;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000881;transcript_name=NA12877_ch_T0000881;gene_name=TTTY23;ID=intron:NA12877_ch_T0000881:1;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9759229	9759537	.	+	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=ENST00000452889.1,ENST00000452889.1;transcript_id=NA12877_ch_T0000881;gene_id=NA12877_ch_G0000285;Parent=NA12877_ch_T0000881;transcript_name=NA12877_ch_T0000881;gene_name=TTTY23;ID=exon:NA12877_ch_T0000881:2;Name=TTTY23;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9799128	9806996	.	+	.	source_gene_common_name=RBMY2OP;source_gene=ENSG00000234950.1;alternative_source_transcripts=ENST00000447105.1;gene_id=NA12877_ch_G0000286;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2OP;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000286;Name=RBMY2OP
NA12877_chrY	CAT	transcript	9799128	9806996	1000	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=NA12877_ch_T0000882;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_G0000286;transcript_name=NA12877_ch_T0000882;gene_name=RBMY2OP;ID=NA12877_ch_T0000882;Name=RBMY2OP
NA12877_chrY	CAT	exon	9799128	9799236	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=NA12877_ch_T0000882;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000882;transcript_name=NA12877_ch_T0000882;gene_name=RBMY2OP;ID=exon:NA12877_ch_T0000882:0;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9799237	9799695	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=NA12877_ch_T0000882;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000882;transcript_name=NA12877_ch_T0000882;gene_name=RBMY2OP;ID=intron:NA12877_ch_T0000882:0;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9799696	9799771	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=NA12877_ch_T0000882;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000882;transcript_name=NA12877_ch_T0000882;gene_name=RBMY2OP;ID=exon:NA12877_ch_T0000882:1;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9799772	9805012	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=NA12877_ch_T0000882;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000882;transcript_name=NA12877_ch_T0000882;gene_name=RBMY2OP;ID=intron:NA12877_ch_T0000882:1;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9805013	9805125	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=NA12877_ch_T0000882;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000882;transcript_name=NA12877_ch_T0000882;gene_name=RBMY2OP;ID=exon:NA12877_ch_T0000882:2;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9805126	9805991	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=NA12877_ch_T0000882;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000882;transcript_name=NA12877_ch_T0000882;gene_name=RBMY2OP;ID=intron:NA12877_ch_T0000882:2;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9805992	9806271	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=NA12877_ch_T0000882;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000882;transcript_name=NA12877_ch_T0000882;gene_name=RBMY2OP;ID=exon:NA12877_ch_T0000882:3;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9806272	9806684	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=NA12877_ch_T0000882;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000882;transcript_name=NA12877_ch_T0000882;gene_name=RBMY2OP;ID=intron:NA12877_ch_T0000882:3;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9806685	9806996	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=NA12877_ch_T0000882;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000882;transcript_name=NA12877_ch_T0000882;gene_name=RBMY2OP;ID=exon:NA12877_ch_T0000882:4;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9799128	9806996	1000	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=NA12877_ch_T0000883;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_G0000286;transcript_name=NA12877_ch_T0000883;gene_name=RBMY2OP;ID=NA12877_ch_T0000883;Name=RBMY2OP
NA12877_chrY	CAT	exon	9799128	9799236	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=NA12877_ch_T0000883;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000883;transcript_name=NA12877_ch_T0000883;gene_name=RBMY2OP;ID=exon:NA12877_ch_T0000883:0;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9799237	9799695	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=NA12877_ch_T0000883;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000883;transcript_name=NA12877_ch_T0000883;gene_name=RBMY2OP;ID=intron:NA12877_ch_T0000883:0;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9799696	9799771	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=NA12877_ch_T0000883;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000883;transcript_name=NA12877_ch_T0000883;gene_name=RBMY2OP;ID=exon:NA12877_ch_T0000883:1;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9799772	9805012	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=NA12877_ch_T0000883;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000883;transcript_name=NA12877_ch_T0000883;gene_name=RBMY2OP;ID=intron:NA12877_ch_T0000883:1;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9805013	9805125	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=NA12877_ch_T0000883;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000883;transcript_name=NA12877_ch_T0000883;gene_name=RBMY2OP;ID=exon:NA12877_ch_T0000883:2;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9805126	9805991	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=NA12877_ch_T0000883;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000883;transcript_name=NA12877_ch_T0000883;gene_name=RBMY2OP;ID=intron:NA12877_ch_T0000883:2;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9805992	9806102	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=NA12877_ch_T0000883;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000883;transcript_name=NA12877_ch_T0000883;gene_name=RBMY2OP;ID=exon:NA12877_ch_T0000883:3;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9806103	9806182	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=NA12877_ch_T0000883;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000883;transcript_name=NA12877_ch_T0000883;gene_name=RBMY2OP;ID=intron:NA12877_ch_T0000883:3;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9806183	9806271	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=NA12877_ch_T0000883;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000883;transcript_name=NA12877_ch_T0000883;gene_name=RBMY2OP;ID=exon:NA12877_ch_T0000883:4;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9806272	9806684	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=NA12877_ch_T0000883;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000883;transcript_name=NA12877_ch_T0000883;gene_name=RBMY2OP;ID=intron:NA12877_ch_T0000883:4;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9806685	9806996	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=NA12877_ch_T0000883;gene_id=NA12877_ch_G0000286;Parent=NA12877_ch_T0000883;transcript_name=NA12877_ch_T0000883;gene_name=RBMY2OP;ID=exon:NA12877_ch_T0000883:5;Name=RBMY2OP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9802105	9882873	.	-	.	source_gene_common_name=ENSG00000290344;source_gene=ENSG00000290344.2;gene_id=NA12877_ch_G0000287;gene_biotype=lncRNA;gene_name=ENSG00000290344;gene_sources=liftoff;ID=NA12877_ch_G0000287;Name=ENSG00000290344
NA12877_chrY	CAT	transcript	9802105	9882870	1000	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=NA12877_ch_T0000884;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9802105	9802265	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000884:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9802266	9836763	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000884:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9836764	9836813	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000884:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9836814	9843171	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000884:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9843172	9843290	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000884:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9843291	9870765	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000884:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000884:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000884:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000884:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000884:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000884:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9877959	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000884:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000884:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881125	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000884:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881126	9881226	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000884:7;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881227	9881658	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000884:7;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000884:8;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882724	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000884:8;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882725	9882870	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000884;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000884;transcript_name=NA12877_ch_T0000884;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000884:9;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9802105	9882836	1000	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000885;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000885;gene_name=ENSG00000290344;ID=NA12877_ch_T0000885;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9802105	9802265	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000885;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000885;transcript_name=NA12877_ch_T0000885;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000885:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9802266	9870765	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000885;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000885;transcript_name=NA12877_ch_T0000885;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000885:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000885;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000885;transcript_name=NA12877_ch_T0000885;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000885:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000885;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000885;transcript_name=NA12877_ch_T0000885;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000885:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000885;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000885;transcript_name=NA12877_ch_T0000885;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000885:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000885;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000885;transcript_name=NA12877_ch_T0000885;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000885:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000885;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000885;transcript_name=NA12877_ch_T0000885;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000885:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9882724	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000885;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000885;transcript_name=NA12877_ch_T0000885;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000885:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882725	9882836	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000885;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000885;transcript_name=NA12877_ch_T0000885;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000885:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9839204	9882836	1000	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=NA12877_ch_T0000886;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9839204	9839785	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000886:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9839786	9843171	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000886:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9843172	9843290	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000886:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9843291	9870765	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000886:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000886:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000886:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000886:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000886:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000886:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9881658	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000886:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000886:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882724	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000886:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882725	9882836	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000886;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000886;transcript_name=NA12877_ch_T0000886;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000886:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9843716	9882834	1000	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000887;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000887;gene_name=ENSG00000290344;ID=NA12877_ch_T0000887;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9843716	9844043	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000887;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000887;transcript_name=NA12877_ch_T0000887;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000887:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9844044	9870765	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000887;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000887;transcript_name=NA12877_ch_T0000887;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000887:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000887;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000887;transcript_name=NA12877_ch_T0000887;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000887:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000887;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000887;transcript_name=NA12877_ch_T0000887;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000887:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000887;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000887;transcript_name=NA12877_ch_T0000887;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000887:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000887;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000887;transcript_name=NA12877_ch_T0000887;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000887:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000887;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000887;transcript_name=NA12877_ch_T0000887;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000887:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9877959	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000887;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000887;transcript_name=NA12877_ch_T0000887;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000887:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000887;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000887;transcript_name=NA12877_ch_T0000887;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000887:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9882693	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000887;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000887;transcript_name=NA12877_ch_T0000887;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000887:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882694	9882834	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000887;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000887;transcript_name=NA12877_ch_T0000887;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000887:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9843716	9882836	1000	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=NA12877_ch_T0000888;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9843716	9844043	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000888:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9844044	9870765	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000888:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000888:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000888:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000888:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000888:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000888:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9877959	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000888:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000888:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881125	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000888:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881126	9881226	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000888:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881227	9881658	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000888:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000888:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882724	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000888:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882725	9882836	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000888;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000888;transcript_name=NA12877_ch_T0000888;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000888:7;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9843719	9882852	1000	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000889;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000889;gene_name=ENSG00000290344;ID=NA12877_ch_T0000889;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9843719	9844043	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000889;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000889;transcript_name=NA12877_ch_T0000889;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000889:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9844044	9870765	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000889;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000889;transcript_name=NA12877_ch_T0000889;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000889:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000889;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000889;transcript_name=NA12877_ch_T0000889;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000889:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000889;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000889;transcript_name=NA12877_ch_T0000889;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000889:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000889;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000889;transcript_name=NA12877_ch_T0000889;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000889:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000889;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000889;transcript_name=NA12877_ch_T0000889;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000889:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000889;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000889;transcript_name=NA12877_ch_T0000889;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000889:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9882693	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000889;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000889;transcript_name=NA12877_ch_T0000889;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000889:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882694	9882852	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000889;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000889;transcript_name=NA12877_ch_T0000889;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000889:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9843730	9882836	1000	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=NA12877_ch_T0000890;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9843730	9844043	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000890:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9844044	9870765	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000890:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000890:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000890:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000890:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000890:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000890:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9877959	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000890:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000890:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881658	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000890:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000890:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882724	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000890:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882725	9882836	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000890;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000890;transcript_name=NA12877_ch_T0000890;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000890:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9843730	9882873	1000	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000891;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000891;gene_name=ENSG00000290344;ID=NA12877_ch_T0000891;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9843730	9844043	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000891;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000891;transcript_name=NA12877_ch_T0000891;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000891:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9844044	9870765	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000891;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000891;transcript_name=NA12877_ch_T0000891;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000891:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000891;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000891;transcript_name=NA12877_ch_T0000891;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000891:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000891;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000891;transcript_name=NA12877_ch_T0000891;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000891:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000891;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000891;transcript_name=NA12877_ch_T0000891;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000891:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000891;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000891;transcript_name=NA12877_ch_T0000891;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000891:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000891;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000891;transcript_name=NA12877_ch_T0000891;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000891:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9882724	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000891;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000891;transcript_name=NA12877_ch_T0000891;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000891:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882725	9882873	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000891;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000891;transcript_name=NA12877_ch_T0000891;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000891:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9852173	9882876	1000	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=NA12877_ch_T0000892;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9852173	9852759	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000892:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9852760	9870765	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000892:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000892:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000892:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000892:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000892:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000892:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9877959	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000892:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000892:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881125	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000892:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881126	9881226	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000892:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881227	9881658	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000892:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000892:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882693	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000892:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882694	9882876	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000892;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000892;transcript_name=NA12877_ch_T0000892;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000892:7;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9852549	9882902	1000	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=NA12877_ch_T0000893;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9852549	9852759	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000893:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9852760	9870765	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000893:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000893:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000893:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000893:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000893:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000893:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9877959	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000893:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000893:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881658	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000893:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000893:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882693	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000893:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882694	9882902	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000893;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000893;transcript_name=NA12877_ch_T0000893;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000893:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9860661	9882850	1000	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=NA12877_ch_T0000894;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9860661	9860925	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000894:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9860926	9870765	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000894:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000894:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000894:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000894:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000894:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000894:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9877959	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000894:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000894:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881125	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000894:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881126	9881226	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000894:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881227	9881658	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000894:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000894:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882693	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000894:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882694	9882850	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000894;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000894;transcript_name=NA12877_ch_T0000894;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000894:7;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9869775	9882850	1000	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=NA12877_ch_T0000895;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9869775	9870164	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000895:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870165	9870765	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000895:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000895:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000895:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000895:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000895:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000895:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9877959	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000895:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000895:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881658	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000895:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000895:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882693	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000895:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882694	9882850	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000895;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000895;transcript_name=NA12877_ch_T0000895;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000895:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9869777	9882873	1000	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000896;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000896;gene_name=ENSG00000290344;ID=NA12877_ch_T0000896;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9869777	9870164	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000896;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000896;transcript_name=NA12877_ch_T0000896;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000896:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870165	9870765	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000896;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000896;transcript_name=NA12877_ch_T0000896;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000896:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000896;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000896;transcript_name=NA12877_ch_T0000896;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000896:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000896;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000896;transcript_name=NA12877_ch_T0000896;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000896:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000896;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000896;transcript_name=NA12877_ch_T0000896;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000896:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000896;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000896;transcript_name=NA12877_ch_T0000896;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000896:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000896;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000896;transcript_name=NA12877_ch_T0000896;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000896:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9882724	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000896;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000896;transcript_name=NA12877_ch_T0000896;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000896:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882725	9882873	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000896;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000896;transcript_name=NA12877_ch_T0000896;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000896:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9869777	9882851	1000	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=NA12877_ch_T0000897;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9869777	9870164	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000897:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870165	9870765	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000897:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000897:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000897:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000897:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000897:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000897:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9877959	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000897:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000897:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881125	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000897:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881126	9881226	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000897:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881227	9881658	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000897:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000897:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882724	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000897:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882725	9882851	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000897;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000897;transcript_name=NA12877_ch_T0000897;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000897:7;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9869777	9882855	1000	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000898;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000898;gene_name=ENSG00000290344;ID=NA12877_ch_T0000898;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9869777	9870164	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000898;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000898;transcript_name=NA12877_ch_T0000898;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000898:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870165	9870765	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000898;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000898;transcript_name=NA12877_ch_T0000898;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000898:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000898;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000898;transcript_name=NA12877_ch_T0000898;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000898:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000898;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000898;transcript_name=NA12877_ch_T0000898;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000898:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000898;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000898;transcript_name=NA12877_ch_T0000898;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000898:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000898;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000898;transcript_name=NA12877_ch_T0000898;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000898:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000898;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000898;transcript_name=NA12877_ch_T0000898;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000898:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9881658	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000898;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000898;transcript_name=NA12877_ch_T0000898;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000898:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000898;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000898;transcript_name=NA12877_ch_T0000898;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000898:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882724	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000898;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000898;transcript_name=NA12877_ch_T0000898;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000898:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882725	9882855	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000898;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000898;transcript_name=NA12877_ch_T0000898;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000898:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9869777	9882873	1000	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=NA12877_ch_T0000899;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9869777	9870164	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000899:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870165	9870765	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000899:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000899:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000899:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000899:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000899:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000899:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9877959	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000899:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000899:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881658	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000899:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000899:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882724	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000899:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882725	9882873	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000899;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000899;transcript_name=NA12877_ch_T0000899;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000899:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9869777	9882855	1000	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000900;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000900;gene_name=ENSG00000290344;ID=NA12877_ch_T0000900;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9869777	9870164	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000900;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000900;transcript_name=NA12877_ch_T0000900;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000900:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870165	9870765	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000900;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000900;transcript_name=NA12877_ch_T0000900;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000900:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000900;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000900;transcript_name=NA12877_ch_T0000900;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000900:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000900;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000900;transcript_name=NA12877_ch_T0000900;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000900:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000900;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000900;transcript_name=NA12877_ch_T0000900;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000900:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000900;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000900;transcript_name=NA12877_ch_T0000900;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000900:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000900;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000900;transcript_name=NA12877_ch_T0000900;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000900:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9877959	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000900;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000900;transcript_name=NA12877_ch_T0000900;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000900:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000900;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000900;transcript_name=NA12877_ch_T0000900;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000900:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9882693	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000900;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000900;transcript_name=NA12877_ch_T0000900;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000900:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882694	9882855	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000900;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000900;transcript_name=NA12877_ch_T0000900;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000900:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9869958	9882834	1000	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000901;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000901;gene_name=ENSG00000290344;ID=NA12877_ch_T0000901;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9869958	9870164	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000901;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000901;transcript_name=NA12877_ch_T0000901;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000901:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870165	9870765	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000901;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000901;transcript_name=NA12877_ch_T0000901;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000901:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000901;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000901;transcript_name=NA12877_ch_T0000901;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000901:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000901;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000901;transcript_name=NA12877_ch_T0000901;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000901:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000901;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000901;transcript_name=NA12877_ch_T0000901;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000901:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000901;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000901;transcript_name=NA12877_ch_T0000901;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000901:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000901;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000901;transcript_name=NA12877_ch_T0000901;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000901:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9881658	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000901;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000901;transcript_name=NA12877_ch_T0000901;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000901:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000901;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000901;transcript_name=NA12877_ch_T0000901;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000901:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882693	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000901;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000901;transcript_name=NA12877_ch_T0000901;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000901:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882694	9882834	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000901;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000901;transcript_name=NA12877_ch_T0000901;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000901:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9870542	9882855	1000	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=NA12877_ch_T0000903;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9870542	9870854	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000903:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000903:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000903:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9874080	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000903:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874189	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000903:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874190	9877959	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000903:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000903:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881125	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000903:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881126	9881226	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000903:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881227	9881658	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000903:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000903:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882724	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000903:5;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882725	9882855	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000903;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000903;transcript_name=NA12877_ch_T0000903;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000903:6;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9876899	9882848	1000	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000904;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000904;gene_name=ENSG00000290344;ID=NA12877_ch_T0000904;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9876899	9877086	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000904;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000904;transcript_name=NA12877_ch_T0000904;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000904:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9877087	9877959	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000904;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000904;transcript_name=NA12877_ch_T0000904;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000904:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000904;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000904;transcript_name=NA12877_ch_T0000904;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000904:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881125	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000904;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000904;transcript_name=NA12877_ch_T0000904;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000904:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881126	9881226	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000904;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000904;transcript_name=NA12877_ch_T0000904;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000904:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881227	9881658	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000904;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000904;transcript_name=NA12877_ch_T0000904;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000904:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000904;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000904;transcript_name=NA12877_ch_T0000904;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000904:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882693	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000904;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000904;transcript_name=NA12877_ch_T0000904;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000904:3;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882694	9882848	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000904;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000904;transcript_name=NA12877_ch_T0000904;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000904:4;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	9877426	9882838	1000	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000905;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_G0000287;transcript_name=NA12877_ch_T0000905;gene_name=ENSG00000290344;ID=NA12877_ch_T0000905;Name=ENSG00000290344
NA12877_chrY	CAT	exon	9877426	9878137	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000905;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000905;transcript_name=NA12877_ch_T0000905;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000905:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881658	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000905;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000905;transcript_name=NA12877_ch_T0000905;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000905:0;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000905;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000905;transcript_name=NA12877_ch_T0000905;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000905:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881759	9882693	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000905;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000905;transcript_name=NA12877_ch_T0000905;gene_name=ENSG00000290344;ID=intron:NA12877_ch_T0000905:1;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9882694	9882838	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=NA12877_ch_T0000905;gene_id=NA12877_ch_G0000287;Parent=NA12877_ch_T0000905;transcript_name=NA12877_ch_T0000905;gene_name=ENSG00000290344;ID=exon:NA12877_ch_T0000905:2;Name=ENSG00000290344;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9870060	9881758	.	-	.	source_gene_common_name=RBMY2QP;source_gene=ENSG00000236718.5;gene_id=NA12877_ch_G0000288;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2QP;gene_sources=liftoff;ID=NA12877_ch_G0000288;Name=RBMY2QP
NA12877_chrY	CAT	transcript	9870060	9881758	1000	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_G0000288;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=NA12877_ch_T0000902;Name=RBMY2QP
NA12877_chrY	CAT	exon	9870060	9870360	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=exon:NA12877_ch_T0000902:0;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870361	9870765	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=intron:NA12877_ch_T0000902:0;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870766	9870854	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=exon:NA12877_ch_T0000902:1;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9870855	9870940	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=intron:NA12877_ch_T0000902:1;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9870941	9871051	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=exon:NA12877_ch_T0000902:2;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9871052	9871927	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=intron:NA12877_ch_T0000902:2;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9871928	9872042	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=exon:NA12877_ch_T0000902:3;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9872043	9874080	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=intron:NA12877_ch_T0000902:3;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9874081	9874232	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=exon:NA12877_ch_T0000902:4;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9874233	9877959	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=intron:NA12877_ch_T0000902:4;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9877960	9878137	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=exon:NA12877_ch_T0000902:5;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9878138	9881125	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=intron:NA12877_ch_T0000902:5;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881126	9881226	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=exon:NA12877_ch_T0000902:6;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9881227	9881658	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=intron:NA12877_ch_T0000902:6;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9881659	9881758	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=NA12877_ch_T0000902;gene_id=NA12877_ch_G0000288;Parent=NA12877_ch_T0000902;transcript_name=NA12877_ch_T0000902;gene_name=RBMY2QP;ID=exon:NA12877_ch_T0000902:7;Name=RBMY2QP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9883766	9885946	.	+	.	source_gene_common_name=TSPY20P;source_gene=ENSG00000243643.1;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;gene_id=NA12877_ch_G0000289;gene_biotype=unprocessed_pseudogene;gene_name=TSPY20P;gene_sources=liftoff;ID=NA12877_ch_G0000289;Name=TSPY20P
NA12877_chrY	CAT	transcript	9883766	9885946	1000	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=NA12877_ch_T0000906;gene_id=NA12877_ch_G0000289;Parent=NA12877_ch_G0000289;transcript_name=NA12877_ch_T0000906;gene_name=TSPY20P;ID=NA12877_ch_T0000906;Name=TSPY20P
NA12877_chrY	CAT	exon	9883766	9884123	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=NA12877_ch_T0000906;gene_id=NA12877_ch_G0000289;Parent=NA12877_ch_T0000906;transcript_name=NA12877_ch_T0000906;gene_name=TSPY20P;ID=exon:NA12877_ch_T0000906:0;Name=TSPY20P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9884124	9885469	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=NA12877_ch_T0000906;gene_id=NA12877_ch_G0000289;Parent=NA12877_ch_T0000906;transcript_name=NA12877_ch_T0000906;gene_name=TSPY20P;ID=intron:NA12877_ch_T0000906:0;Name=TSPY20P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9885470	9885538	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=NA12877_ch_T0000906;gene_id=NA12877_ch_G0000289;Parent=NA12877_ch_T0000906;transcript_name=NA12877_ch_T0000906;gene_name=TSPY20P;ID=exon:NA12877_ch_T0000906:1;Name=TSPY20P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9885539	9885633	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=NA12877_ch_T0000906;gene_id=NA12877_ch_G0000289;Parent=NA12877_ch_T0000906;transcript_name=NA12877_ch_T0000906;gene_name=TSPY20P;ID=intron:NA12877_ch_T0000906:1;Name=TSPY20P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9885634	9885779	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=NA12877_ch_T0000906;gene_id=NA12877_ch_G0000289;Parent=NA12877_ch_T0000906;transcript_name=NA12877_ch_T0000906;gene_name=TSPY20P;ID=exon:NA12877_ch_T0000906:2;Name=TSPY20P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9885780	9885889	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=NA12877_ch_T0000906;gene_id=NA12877_ch_G0000289;Parent=NA12877_ch_T0000906;transcript_name=NA12877_ch_T0000906;gene_name=TSPY20P;ID=intron:NA12877_ch_T0000906:2;Name=TSPY20P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9885890	9885946	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=NA12877_ch_T0000906;gene_id=NA12877_ch_G0000289;Parent=NA12877_ch_T0000906;transcript_name=NA12877_ch_T0000906;gene_name=TSPY20P;ID=exon:NA12877_ch_T0000906:3;Name=TSPY20P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9914125	9914957	.	-	.	source_gene_common_name=ENSG00000290378;source_gene=ENSG00000290378.1;gene_id=NA12877_ch_G0000290;gene_biotype=lncRNA;gene_name=ENSG00000290378;gene_sources=liftoff;ID=NA12877_ch_G0000290;Name=ENSG00000290378
NA12877_chrY	CAT	transcript	9914125	9914957	1000	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=NA12877_ch_T0000907;gene_id=NA12877_ch_G0000290;Parent=NA12877_ch_G0000290;transcript_name=NA12877_ch_T0000907;gene_name=ENSG00000290378;ID=NA12877_ch_T0000907;Name=ENSG00000290378
NA12877_chrY	CAT	exon	9914125	9914180	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=NA12877_ch_T0000907;gene_id=NA12877_ch_G0000290;Parent=NA12877_ch_T0000907;transcript_name=NA12877_ch_T0000907;gene_name=ENSG00000290378;ID=exon:NA12877_ch_T0000907:0;Name=ENSG00000290378;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9914181	9914871	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=NA12877_ch_T0000907;gene_id=NA12877_ch_G0000290;Parent=NA12877_ch_T0000907;transcript_name=NA12877_ch_T0000907;gene_name=ENSG00000290378;ID=intron:NA12877_ch_T0000907:0;Name=ENSG00000290378;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9914872	9914957	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=NA12877_ch_T0000907;gene_id=NA12877_ch_G0000290;Parent=NA12877_ch_T0000907;transcript_name=NA12877_ch_T0000907;gene_name=ENSG00000290378;ID=exon:NA12877_ch_T0000907:1;Name=ENSG00000290378;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9914158	9916722	.	-	.	source_gene_common_name=TSPY5P;source_gene=ENSG00000225685.2;gene_id=NA12877_ch_G0000291;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY5P;gene_sources=liftoff;ID=NA12877_ch_G0000291;Name=TSPY5P
NA12877_chrY	CAT	transcript	9914158	9916722	1000	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=NA12877_ch_T0000908;gene_id=NA12877_ch_G0000291;Parent=NA12877_ch_G0000291;transcript_name=NA12877_ch_T0000908;gene_name=TSPY5P;ID=NA12877_ch_T0000908;Name=TSPY5P
NA12877_chrY	CAT	exon	9914158	9914180	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=NA12877_ch_T0000908;gene_id=NA12877_ch_G0000291;Parent=NA12877_ch_T0000908;transcript_name=NA12877_ch_T0000908;gene_name=TSPY5P;ID=exon:NA12877_ch_T0000908:0;Name=TSPY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9914181	9914871	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=NA12877_ch_T0000908;gene_id=NA12877_ch_G0000291;Parent=NA12877_ch_T0000908;transcript_name=NA12877_ch_T0000908;gene_name=TSPY5P;ID=intron:NA12877_ch_T0000908:0;Name=TSPY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9914872	9914953	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=NA12877_ch_T0000908;gene_id=NA12877_ch_G0000291;Parent=NA12877_ch_T0000908;transcript_name=NA12877_ch_T0000908;gene_name=TSPY5P;ID=exon:NA12877_ch_T0000908:1;Name=TSPY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9914954	9915059	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=NA12877_ch_T0000908;gene_id=NA12877_ch_G0000291;Parent=NA12877_ch_T0000908;transcript_name=NA12877_ch_T0000908;gene_name=TSPY5P;ID=intron:NA12877_ch_T0000908:1;Name=TSPY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9915060	9915205	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=NA12877_ch_T0000908;gene_id=NA12877_ch_G0000291;Parent=NA12877_ch_T0000908;transcript_name=NA12877_ch_T0000908;gene_name=TSPY5P;ID=exon:NA12877_ch_T0000908:2;Name=TSPY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9915206	9915302	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=NA12877_ch_T0000908;gene_id=NA12877_ch_G0000291;Parent=NA12877_ch_T0000908;transcript_name=NA12877_ch_T0000908;gene_name=TSPY5P;ID=intron:NA12877_ch_T0000908:2;Name=TSPY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9915303	9915414	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=NA12877_ch_T0000908;gene_id=NA12877_ch_G0000291;Parent=NA12877_ch_T0000908;transcript_name=NA12877_ch_T0000908;gene_name=TSPY5P;ID=exon:NA12877_ch_T0000908:3;Name=TSPY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9915415	9915542	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=NA12877_ch_T0000908;gene_id=NA12877_ch_G0000291;Parent=NA12877_ch_T0000908;transcript_name=NA12877_ch_T0000908;gene_name=TSPY5P;ID=intron:NA12877_ch_T0000908:3;Name=TSPY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9915543	9915620	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=NA12877_ch_T0000908;gene_id=NA12877_ch_G0000291;Parent=NA12877_ch_T0000908;transcript_name=NA12877_ch_T0000908;gene_name=TSPY5P;ID=exon:NA12877_ch_T0000908:4;Name=TSPY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	9915621	9916227	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=NA12877_ch_T0000908;gene_id=NA12877_ch_G0000291;Parent=NA12877_ch_T0000908;transcript_name=NA12877_ch_T0000908;gene_name=TSPY5P;ID=intron:NA12877_ch_T0000908:4;Name=TSPY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	9916228	9916722	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=NA12877_ch_T0000908;gene_id=NA12877_ch_G0000291;Parent=NA12877_ch_T0000908;transcript_name=NA12877_ch_T0000908;gene_name=TSPY5P;ID=exon:NA12877_ch_T0000908:5;Name=TSPY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9917702	9917980	.	+	.	source_gene_common_name=ENSG00000278478;source_gene=ENSG00000278478.1;alternative_source_transcripts=ENST00000430032.3,ENST00000430032.3;gene_id=NA12877_ch_G0000292;gene_biotype=processed_pseudogene;gene_name=ENSG00000278478;gene_sources=liftoff;ID=NA12877_ch_G0000292;Name=ENSG00000278478
NA12877_chrY	CAT	transcript	9917702	9917980	1000	+	.	source_transcript=ENST00000430032.3;source_transcript_name=ENST00000430032;source_gene=ENSG00000278478.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278478.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430032.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000430032.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278478;alternative_source_transcripts=ENST00000430032.3,ENST00000430032.3;transcript_id=NA12877_ch_T0000909;gene_id=NA12877_ch_G0000292;Parent=NA12877_ch_G0000292;transcript_name=NA12877_ch_T0000909;gene_name=ENSG00000278478;ID=NA12877_ch_T0000909;Name=ENSG00000278478
NA12877_chrY	CAT	exon	9917702	9917980	.	+	.	source_transcript=ENST00000430032.3;source_transcript_name=ENST00000430032;source_gene=ENSG00000278478.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278478.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430032.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000430032.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278478;alternative_source_transcripts=ENST00000430032.3,ENST00000430032.3;transcript_id=NA12877_ch_T0000909;gene_id=NA12877_ch_G0000292;Parent=NA12877_ch_T0000909;transcript_name=NA12877_ch_T0000909;gene_name=ENSG00000278478;ID=exon:NA12877_ch_T0000909:0;Name=ENSG00000278478;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9937981	9938099	.	-	.	source_gene_common_name=RNA5SP518;source_gene=ENSG00000251766.1;alternative_source_transcripts=ENST00000515957.1,ENST00000515957.1;gene_id=NA12877_ch_G0000293;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP518;gene_sources=liftoff;ID=NA12877_ch_G0000293;Name=RNA5SP518
NA12877_chrY	CAT	transcript	9937981	9938099	1000	-	.	source_transcript=ENST00000515957.1;source_transcript_name=RNA5SP518-201;source_gene=ENSG00000251766.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251766.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515957.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP518;alternative_source_transcripts=ENST00000515957.1,ENST00000515957.1;transcript_id=NA12877_ch_T0000910;gene_id=NA12877_ch_G0000293;Parent=NA12877_ch_G0000293;transcript_name=NA12877_ch_T0000910;gene_name=RNA5SP518;ID=NA12877_ch_T0000910;Name=RNA5SP518
NA12877_chrY	CAT	exon	9937981	9938099	.	-	.	source_transcript=ENST00000515957.1;source_transcript_name=RNA5SP518-201;source_gene=ENSG00000251766.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251766.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515957.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP518;alternative_source_transcripts=ENST00000515957.1,ENST00000515957.1;transcript_id=NA12877_ch_T0000910;gene_id=NA12877_ch_G0000293;Parent=NA12877_ch_T0000910;transcript_name=NA12877_ch_T0000910;gene_name=RNA5SP518;ID=exon:NA12877_ch_T0000910:0;Name=RNA5SP518;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	9940446	9940564	.	-	.	source_gene_common_name=RNA5SP519;source_gene=ENSG00000252289.1;alternative_source_transcripts=ENST00000516480.1,ENST00000516480.1;gene_id=NA12877_ch_G0000294;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP519;gene_sources=liftoff;ID=NA12877_ch_G0000294;Name=RNA5SP519
NA12877_chrY	CAT	transcript	9940446	9940564	1000	-	.	source_transcript=ENST00000516480.1;source_transcript_name=RNA5SP519-201;source_gene=ENSG00000252289.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252289.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516480.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP519;alternative_source_transcripts=ENST00000516480.1,ENST00000516480.1;transcript_id=NA12877_ch_T0000911;gene_id=NA12877_ch_G0000294;Parent=NA12877_ch_G0000294;transcript_name=NA12877_ch_T0000911;gene_name=RNA5SP519;ID=NA12877_ch_T0000911;Name=RNA5SP519
NA12877_chrY	CAT	exon	9940446	9940564	.	-	.	source_transcript=ENST00000516480.1;source_transcript_name=RNA5SP519-201;source_gene=ENSG00000252289.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252289.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516480.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP519;alternative_source_transcripts=ENST00000516480.1,ENST00000516480.1;transcript_id=NA12877_ch_T0000911;gene_id=NA12877_ch_G0000294;Parent=NA12877_ch_T0000911;transcript_name=NA12877_ch_T0000911;gene_name=RNA5SP519;ID=exon:NA12877_ch_T0000911:0;Name=RNA5SP519;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10019161	10020296	.	-	.	source_gene_common_name=DUX4L31;source_gene=ENSG00000231411.1;alternative_source_transcripts=ENST00000446466.1,ENST00000446466.1;gene_id=NA12877_ch_G0000295;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L31;gene_sources=liftoff;ID=NA12877_ch_G0000295;Name=DUX4L31
NA12877_chrY	CAT	transcript	10019161	10020296	1000	-	.	source_transcript=ENST00000446466.1;source_transcript_name=DUX4L31-201;source_gene=ENSG00000231411.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231411.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446466.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L31;alternative_source_transcripts=ENST00000446466.1,ENST00000446466.1;transcript_id=NA12877_ch_T0000912;gene_id=NA12877_ch_G0000295;Parent=NA12877_ch_G0000295;transcript_name=NA12877_ch_T0000912;gene_name=DUX4L31;ID=NA12877_ch_T0000912;Name=DUX4L31
NA12877_chrY	CAT	exon	10019161	10020296	.	-	.	source_transcript=ENST00000446466.1;source_transcript_name=DUX4L31-201;source_gene=ENSG00000231411.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231411.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446466.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L31;alternative_source_transcripts=ENST00000446466.1,ENST00000446466.1;transcript_id=NA12877_ch_T0000912;gene_id=NA12877_ch_G0000295;Parent=NA12877_ch_T0000912;transcript_name=NA12877_ch_T0000912;gene_name=DUX4L31;ID=exon:NA12877_ch_T0000912:0;Name=DUX4L31;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10021424	10021778	.	+	.	source_gene_common_name=PCMTD1P1;source_gene=ENSG00000226061.1;alternative_source_transcripts=ENST00000455560.1,ENST00000455560.1;gene_id=NA12877_ch_G0000296;gene_biotype=unprocessed_pseudogene;gene_name=PCMTD1P1;gene_sources=liftoff;ID=NA12877_ch_G0000296;Name=PCMTD1P1
NA12877_chrY	CAT	transcript	10021424	10021778	1000	+	.	source_transcript=ENST00000455560.1;source_transcript_name=PCMTD1P1-201;source_gene=ENSG00000226061.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226061.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455560.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455560.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCMTD1P1;alternative_source_transcripts=ENST00000455560.1,ENST00000455560.1;transcript_id=NA12877_ch_T0000913;gene_id=NA12877_ch_G0000296;Parent=NA12877_ch_G0000296;transcript_name=NA12877_ch_T0000913;gene_name=PCMTD1P1;ID=NA12877_ch_T0000913;Name=PCMTD1P1
NA12877_chrY	CAT	exon	10021424	10021778	.	+	.	source_transcript=ENST00000455560.1;source_transcript_name=PCMTD1P1-201;source_gene=ENSG00000226061.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226061.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455560.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455560.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCMTD1P1;alternative_source_transcripts=ENST00000455560.1,ENST00000455560.1;transcript_id=NA12877_ch_T0000913;gene_id=NA12877_ch_G0000296;Parent=NA12877_ch_T0000913;transcript_name=NA12877_ch_T0000913;gene_name=PCMTD1P1;ID=exon:NA12877_ch_T0000913:0;Name=PCMTD1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10037949	10039870	.	-	.	source_gene_common_name=CDC27P2;source_gene=ENSG00000237447.1;alternative_source_transcripts=ENST00000425026.1,ENST00000425026.1;gene_id=NA12877_ch_G0000297;gene_biotype=processed_pseudogene;gene_name=CDC27P2;gene_sources=liftoff;ID=NA12877_ch_G0000297;Name=CDC27P2
NA12877_chrY	CAT	transcript	10037949	10039870	1000	-	.	source_transcript=ENST00000425026.1;source_transcript_name=CDC27P2-201;source_gene=ENSG00000237447.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237447.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425026.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDC27P2;alternative_source_transcripts=ENST00000425026.1,ENST00000425026.1;transcript_id=NA12877_ch_T0000914;gene_id=NA12877_ch_G0000297;Parent=NA12877_ch_G0000297;transcript_name=NA12877_ch_T0000914;gene_name=CDC27P2;ID=NA12877_ch_T0000914;Name=CDC27P2
NA12877_chrY	CAT	exon	10037949	10039870	.	-	.	source_transcript=ENST00000425026.1;source_transcript_name=CDC27P2-201;source_gene=ENSG00000237447.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237447.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425026.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDC27P2;alternative_source_transcripts=ENST00000425026.1,ENST00000425026.1;transcript_id=NA12877_ch_T0000914;gene_id=NA12877_ch_G0000297;Parent=NA12877_ch_T0000914;transcript_name=NA12877_ch_T0000914;gene_name=CDC27P2;ID=exon:NA12877_ch_T0000914:0;Name=CDC27P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10044828	10046675	.	-	.	source_gene_common_name=ENSG00000225840;source_gene=ENSG00000225840.2;alternative_source_transcripts=ENST00000445125.2;gene_id=NA12877_ch_G0000298;gene_biotype=processed_pseudogene;gene_name=ENSG00000225840;gene_sources=liftoff;ID=NA12877_ch_G0000298;Name=ENSG00000225840
NA12877_chrY	CAT	transcript	10044828	10046675	1000	-	.	source_transcript=ENST00000445125.2;source_transcript_name=ENST00000445125;source_gene=ENSG00000225840.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225840.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445125.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445125.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225840;alternative_source_transcripts=ENST00000445125.2;transcript_id=NA12877_ch_T0000915;gene_id=NA12877_ch_G0000298;Parent=NA12877_ch_G0000298;transcript_name=NA12877_ch_T0000915;gene_name=ENSG00000225840;ID=NA12877_ch_T0000915;Name=ENSG00000225840
NA12877_chrY	CAT	exon	10044828	10046675	.	-	.	source_transcript=ENST00000445125.2;source_transcript_name=ENST00000445125;source_gene=ENSG00000225840.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225840.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445125.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445125.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225840;alternative_source_transcripts=ENST00000445125.2;transcript_id=NA12877_ch_T0000915;gene_id=NA12877_ch_G0000298;Parent=NA12877_ch_T0000915;transcript_name=NA12877_ch_T0000915;gene_name=ENSG00000225840;ID=exon:NA12877_ch_T0000915:0;Name=ENSG00000225840;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10047727	10047878	.	+	.	source_gene_common_name=RNA5-8SP6;source_gene=ENSG00000251705.1;alternative_source_transcripts=ENST00000515896.1;gene_id=NA12877_ch_G0000299;gene_biotype=rRNA_pseudogene;gene_name=RNA5-8SP6;gene_sources=liftoff;ID=NA12877_ch_G0000299;Name=RNA5-8SP6
NA12877_chrY	CAT	transcript	10047727	10047878	1000	+	.	source_transcript=ENST00000515896.1;source_transcript_name=RNA5-8SP6-201;source_gene=ENSG00000251705.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251705.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515896.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5-8SP6;alternative_source_transcripts=ENST00000515896.1;transcript_id=NA12877_ch_T0000916;gene_id=NA12877_ch_G0000299;Parent=NA12877_ch_G0000299;transcript_name=NA12877_ch_T0000916;gene_name=RNA5-8SP6;ID=NA12877_ch_T0000916;Name=RNA5-8SP6
NA12877_chrY	CAT	exon	10047727	10047878	.	+	.	source_transcript=ENST00000515896.1;source_transcript_name=RNA5-8SP6-201;source_gene=ENSG00000251705.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251705.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515896.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5-8SP6;alternative_source_transcripts=ENST00000515896.1;transcript_id=NA12877_ch_T0000916;gene_id=NA12877_ch_G0000299;Parent=NA12877_ch_T0000916;transcript_name=NA12877_ch_T0000916;gene_name=RNA5-8SP6;ID=exon:NA12877_ch_T0000916:0;Name=RNA5-8SP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10832750	10832971	.	-	.	source_gene_common_name=ENSG00000273858;source_gene=ENSG00000273858.1;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;gene_id=NA12877_ch_G0000300;gene_biotype=processed_pseudogene;gene_name=ENSG00000273858;gene_sources=liftoff;ID=NA12877_ch_G0000300;Name=ENSG00000273858
NA12877_chrY	CAT	transcript	10832750	10832971	1000	-	.	source_transcript=ENST00000622087.1;source_transcript_name=ENST00000622087;source_gene=ENSG00000273858.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273858.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622087.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273858;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;transcript_id=NA12877_ch_T0000917;gene_id=NA12877_ch_G0000300;Parent=NA12877_ch_G0000300;transcript_name=NA12877_ch_T0000917;gene_name=ENSG00000273858;ID=NA12877_ch_T0000917;Name=ENSG00000273858
NA12877_chrY	CAT	exon	10832750	10832971	.	-	.	source_transcript=ENST00000622087.1;source_transcript_name=ENST00000622087;source_gene=ENSG00000273858.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273858.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622087.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273858;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;transcript_id=NA12877_ch_T0000917;gene_id=NA12877_ch_G0000300;Parent=NA12877_ch_T0000917;transcript_name=NA12877_ch_T0000917;gene_name=ENSG00000273858;ID=exon:NA12877_ch_T0000917:0;Name=ENSG00000273858;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10875905	10876490	.	-	.	source_gene_common_name=CDRT15P10;source_gene=ENSG00000273693.1;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;gene_id=NA12877_ch_G0000301;gene_biotype=processed_pseudogene;gene_name=CDRT15P10;gene_sources=liftoff;ID=NA12877_ch_G0000301;Name=CDRT15P10
NA12877_chrY	CAT	transcript	10875905	10876490	1000	-	.	source_transcript=ENST00000618128.1;source_transcript_name=CDRT15P10-201;source_gene=ENSG00000273693.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273693.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618128.1;transcript_score=199.829;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDRT15P10;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;transcript_id=NA12877_ch_T0000918;gene_id=NA12877_ch_G0000301;Parent=NA12877_ch_G0000301;transcript_name=NA12877_ch_T0000918;gene_name=CDRT15P10;ID=NA12877_ch_T0000918;Name=CDRT15P10
NA12877_chrY	CAT	exon	10875905	10876490	.	-	.	source_transcript=ENST00000618128.1;source_transcript_name=CDRT15P10-201;source_gene=ENSG00000273693.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273693.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618128.1;transcript_score=199.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDRT15P10;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;transcript_id=NA12877_ch_T0000918;gene_id=NA12877_ch_G0000301;Parent=NA12877_ch_T0000918;transcript_name=NA12877_ch_T0000918;gene_name=CDRT15P10;ID=exon:NA12877_ch_T0000918:0;Name=CDRT15P10;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10897492	10897690	.	-	.	source_gene_common_name=ENSG00000271365;source_gene=ENSG00000271365.1;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;gene_id=NA12877_ch_G0000302;gene_biotype=processed_pseudogene;gene_name=ENSG00000271365;gene_sources=liftoff;ID=NA12877_ch_G0000302;Name=ENSG00000271365
NA12877_chrY	CAT	transcript	10897492	10897690	1000	-	.	source_transcript=ENST00000605663.1;source_transcript_name=ENST00000605663;source_gene=ENSG00000271365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605663.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271365;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;transcript_id=NA12877_ch_T0000919;gene_id=NA12877_ch_G0000302;Parent=NA12877_ch_G0000302;transcript_name=NA12877_ch_T0000919;gene_name=ENSG00000271365;ID=NA12877_ch_T0000919;Name=ENSG00000271365
NA12877_chrY	CAT	exon	10897492	10897690	.	-	.	source_transcript=ENST00000605663.1;source_transcript_name=ENST00000605663;source_gene=ENSG00000271365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605663.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271365;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;transcript_id=NA12877_ch_T0000919;gene_id=NA12877_ch_G0000302;Parent=NA12877_ch_T0000919;transcript_name=NA12877_ch_T0000919;gene_name=ENSG00000271365;ID=exon:NA12877_ch_T0000919:0;Name=ENSG00000271365;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10897816	10898023	.	-	.	source_gene_common_name=ENSG00000271309;source_gene=ENSG00000271309.1;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;gene_id=NA12877_ch_G0000303;gene_biotype=processed_pseudogene;gene_name=ENSG00000271309;gene_sources=liftoff;ID=NA12877_ch_G0000303;Name=ENSG00000271309
NA12877_chrY	CAT	transcript	10897816	10898023	1000	-	.	source_transcript=ENST00000604370.1;source_transcript_name=ENST00000604370;source_gene=ENSG00000271309.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271309.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604370.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271309;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;transcript_id=NA12877_ch_T0000920;gene_id=NA12877_ch_G0000303;Parent=NA12877_ch_G0000303;transcript_name=NA12877_ch_T0000920;gene_name=ENSG00000271309;ID=NA12877_ch_T0000920;Name=ENSG00000271309
NA12877_chrY	CAT	exon	10897816	10898023	.	-	.	source_transcript=ENST00000604370.1;source_transcript_name=ENST00000604370;source_gene=ENSG00000271309.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271309.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604370.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271309;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;transcript_id=NA12877_ch_T0000920;gene_id=NA12877_ch_G0000303;Parent=NA12877_ch_T0000920;transcript_name=NA12877_ch_T0000920;gene_name=ENSG00000271309;ID=exon:NA12877_ch_T0000920:0;Name=ENSG00000271309;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10898146	10898314	.	-	.	source_gene_common_name=ENSG00000270570;source_gene=ENSG00000270570.1;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;gene_id=NA12877_ch_G0000304;gene_biotype=processed_pseudogene;gene_name=ENSG00000270570;gene_sources=liftoff;ID=NA12877_ch_G0000304;Name=ENSG00000270570
NA12877_chrY	CAT	transcript	10898146	10898314	1000	-	.	source_transcript=ENST00000603467.1;source_transcript_name=ENST00000603467;source_gene=ENSG00000270570.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270570.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603467.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000270570;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;transcript_id=NA12877_ch_T0000921;gene_id=NA12877_ch_G0000304;Parent=NA12877_ch_G0000304;transcript_name=NA12877_ch_T0000921;gene_name=ENSG00000270570;ID=NA12877_ch_T0000921;Name=ENSG00000270570
NA12877_chrY	CAT	exon	10898146	10898314	.	-	.	source_transcript=ENST00000603467.1;source_transcript_name=ENST00000603467;source_gene=ENSG00000270570.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270570.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603467.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000270570;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;transcript_id=NA12877_ch_T0000921;gene_id=NA12877_ch_G0000304;Parent=NA12877_ch_T0000921;transcript_name=NA12877_ch_T0000921;gene_name=ENSG00000270570;ID=exon:NA12877_ch_T0000921:0;Name=ENSG00000270570;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10906713	11005453	.	-	.	source_gene_common_name=ENSG00000291032;source_gene=ENSG00000291032.2;gene_id=NA12877_ch_G0000305;gene_biotype=lncRNA;gene_name=ENSG00000291032;gene_sources=liftoff;ID=NA12877_ch_G0000305;Name=ENSG00000291032
NA12877_chrY	CAT	transcript	10906713	11005452	1000	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000922;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000922;gene_name=ENSG00000291032;ID=NA12877_ch_T0000922;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10906713	10906862	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000922;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000922;transcript_name=NA12877_ch_T0000922;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000922:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10906863	10933761	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000922;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000922;transcript_name=NA12877_ch_T0000922;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000922:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10933762	10933796	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000922;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000922;transcript_name=NA12877_ch_T0000922;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000922:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10933797	11003172	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000922;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000922;transcript_name=NA12877_ch_T0000922;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000922:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000922;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000922;transcript_name=NA12877_ch_T0000922;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000922:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000922;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000922;transcript_name=NA12877_ch_T0000922;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000922:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005452	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000922;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000922;transcript_name=NA12877_ch_T0000922;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000922:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10914623	11005456	1000	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000923;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000923;gene_name=ENSG00000291032;ID=NA12877_ch_T0000923;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10914623	10914746	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000923;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000923;transcript_name=NA12877_ch_T0000923;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000923:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10914747	11003172	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000923;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000923;transcript_name=NA12877_ch_T0000923;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000923:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000923;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000923;transcript_name=NA12877_ch_T0000923;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000923:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000923;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000923;transcript_name=NA12877_ch_T0000923;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000923:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005456	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000923;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000923;transcript_name=NA12877_ch_T0000923;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000923:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10917545	11005452	1000	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000924;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000924;gene_name=ENSG00000291032;ID=NA12877_ch_T0000924;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10917545	10917803	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000924;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000924;transcript_name=NA12877_ch_T0000924;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000924:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10917804	11003172	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000924;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000924;transcript_name=NA12877_ch_T0000924;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000924:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000924;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000924;transcript_name=NA12877_ch_T0000924;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000924:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000924;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000924;transcript_name=NA12877_ch_T0000924;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000924:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005452	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000924;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000924;transcript_name=NA12877_ch_T0000924;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000924:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10917550	11003231	1000	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000925;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000925;gene_name=ENSG00000291032;ID=NA12877_ch_T0000925;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10917550	10917803	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000925;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000925;transcript_name=NA12877_ch_T0000925;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000925:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10917804	10933761	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000925;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000925;transcript_name=NA12877_ch_T0000925;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000925:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10933762	10933796	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000925;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000925;transcript_name=NA12877_ch_T0000925;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000925:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10933797	11003172	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000925;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000925;transcript_name=NA12877_ch_T0000925;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000925:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000925;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000925;transcript_name=NA12877_ch_T0000925;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000925:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10944219	11005452	1000	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000927;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000927;gene_name=ENSG00000291032;ID=NA12877_ch_T0000927;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10944219	10944497	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000927;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000927;transcript_name=NA12877_ch_T0000927;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000927:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10944498	10945021	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000927;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000927;transcript_name=NA12877_ch_T0000927;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000927:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10945022	10945042	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000927;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000927;transcript_name=NA12877_ch_T0000927;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000927:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10945043	10946080	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000927;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000927;transcript_name=NA12877_ch_T0000927;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000927:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10946081	10946311	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000927;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000927;transcript_name=NA12877_ch_T0000927;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000927:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10946312	11003172	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000927;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000927;transcript_name=NA12877_ch_T0000927;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000927:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000927;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000927;transcript_name=NA12877_ch_T0000927;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000927:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000927;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000927;transcript_name=NA12877_ch_T0000927;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000927:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005452	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000927;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000927;transcript_name=NA12877_ch_T0000927;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000927:4;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10944219	11005455	1000	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000928;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000928;gene_name=ENSG00000291032;ID=NA12877_ch_T0000928;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10944219	10944527	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000928;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000928;transcript_name=NA12877_ch_T0000928;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000928:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10944528	10946080	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000928;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000928;transcript_name=NA12877_ch_T0000928;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000928:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10946081	10946311	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000928;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000928;transcript_name=NA12877_ch_T0000928;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000928:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10946312	11003172	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000928;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000928;transcript_name=NA12877_ch_T0000928;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000928:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000928;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000928;transcript_name=NA12877_ch_T0000928;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000928:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000928;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000928;transcript_name=NA12877_ch_T0000928;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000928:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005455	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000928;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000928;transcript_name=NA12877_ch_T0000928;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000928:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10944224	11005405	1000	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000929;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000929;gene_name=ENSG00000291032;ID=NA12877_ch_T0000929;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10944224	10944527	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000929;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000929;transcript_name=NA12877_ch_T0000929;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000929:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10944528	11003172	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000929;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000929;transcript_name=NA12877_ch_T0000929;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000929:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000929;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000929;transcript_name=NA12877_ch_T0000929;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000929:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000929;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000929;transcript_name=NA12877_ch_T0000929;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000929:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005405	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000929;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000929;transcript_name=NA12877_ch_T0000929;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000929:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10944224	11005447	1000	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000930;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000930;gene_name=ENSG00000291032;ID=NA12877_ch_T0000930;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10944224	10944497	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000930;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000930;transcript_name=NA12877_ch_T0000930;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000930:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10944498	10946080	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000930;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000930;transcript_name=NA12877_ch_T0000930;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000930:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10946081	10946311	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000930;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000930;transcript_name=NA12877_ch_T0000930;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000930:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10946312	11003172	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000930;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000930;transcript_name=NA12877_ch_T0000930;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000930:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000930;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000930;transcript_name=NA12877_ch_T0000930;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000930:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000930;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000930;transcript_name=NA12877_ch_T0000930;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000930:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005447	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000930;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000930;transcript_name=NA12877_ch_T0000930;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000930:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10944224	11005428	1000	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000931;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000931;gene_name=ENSG00000291032;ID=NA12877_ch_T0000931;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10944224	10944527	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000931;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000931;transcript_name=NA12877_ch_T0000931;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000931:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10944528	10945021	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000931;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000931;transcript_name=NA12877_ch_T0000931;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000931:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10945022	10945209	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000931;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000931;transcript_name=NA12877_ch_T0000931;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000931:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10945210	10945312	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000931;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000931;transcript_name=NA12877_ch_T0000931;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000931:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10945313	10945590	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000931;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000931;transcript_name=NA12877_ch_T0000931;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000931:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10945591	10946080	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000931;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000931;transcript_name=NA12877_ch_T0000931;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000931:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10946081	10946311	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000931;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000931;transcript_name=NA12877_ch_T0000931;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000931:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10946312	11003172	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000931;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000931;transcript_name=NA12877_ch_T0000931;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000931:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000931;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000931;transcript_name=NA12877_ch_T0000931;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000931:4;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000931;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000931;transcript_name=NA12877_ch_T0000931;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000931:4;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005428	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000931;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000931;transcript_name=NA12877_ch_T0000931;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000931:5;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10944227	11005405	1000	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000932;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000932;gene_name=ENSG00000291032;ID=NA12877_ch_T0000932;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10944227	10945209	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000932;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000932;transcript_name=NA12877_ch_T0000932;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000932:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10945210	10946080	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000932;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000932;transcript_name=NA12877_ch_T0000932;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000932:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10946081	10946311	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000932;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000932;transcript_name=NA12877_ch_T0000932;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000932:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10946312	11003172	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000932;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000932;transcript_name=NA12877_ch_T0000932;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000932:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000932;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000932;transcript_name=NA12877_ch_T0000932;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000932:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000932;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000932;transcript_name=NA12877_ch_T0000932;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000932:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005405	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000932;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000932;transcript_name=NA12877_ch_T0000932;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000932:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10944228	11005447	1000	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000933;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000933;gene_name=ENSG00000291032;ID=NA12877_ch_T0000933;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10944228	10944527	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000933;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000933;transcript_name=NA12877_ch_T0000933;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000933:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10944528	10945312	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000933;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000933;transcript_name=NA12877_ch_T0000933;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000933:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10945313	10945467	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000933;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000933;transcript_name=NA12877_ch_T0000933;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000933:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10945468	10946080	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000933;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000933;transcript_name=NA12877_ch_T0000933;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000933:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10946081	10946311	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000933;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000933;transcript_name=NA12877_ch_T0000933;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000933:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10946312	11003172	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000933;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000933;transcript_name=NA12877_ch_T0000933;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000933:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000933;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000933;transcript_name=NA12877_ch_T0000933;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000933:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000933;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000933;transcript_name=NA12877_ch_T0000933;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000933:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005447	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000933;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000933;transcript_name=NA12877_ch_T0000933;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000933:4;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10945916	11005434	1000	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000935;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000935;gene_name=ENSG00000291032;ID=NA12877_ch_T0000935;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10945916	10946311	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000935;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000935;transcript_name=NA12877_ch_T0000935;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000935:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10946312	11003172	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000935;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000935;transcript_name=NA12877_ch_T0000935;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000935:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000935;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000935;transcript_name=NA12877_ch_T0000935;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000935:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000935;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000935;transcript_name=NA12877_ch_T0000935;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000935:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005434	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000935;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000935;transcript_name=NA12877_ch_T0000935;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000935:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10952069	11005550	1000	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000936;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000936;gene_name=ENSG00000291032;ID=NA12877_ch_T0000936;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10952069	10953564	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000936;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000936;transcript_name=NA12877_ch_T0000936;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000936:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11003172	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000936;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000936;transcript_name=NA12877_ch_T0000936;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000936:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000936;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000936;transcript_name=NA12877_ch_T0000936;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000936:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000936;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000936;transcript_name=NA12877_ch_T0000936;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000936:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005550	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000936;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000936;transcript_name=NA12877_ch_T0000936;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000936:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10952076	11005636	1000	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000937;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000937;gene_name=ENSG00000291032;ID=NA12877_ch_T0000937;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10952076	10953553	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000937;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000937;transcript_name=NA12877_ch_T0000937;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000937:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953554	11003172	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000937;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000937;transcript_name=NA12877_ch_T0000937;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000937:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000937;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000937;transcript_name=NA12877_ch_T0000937;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000937:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000937;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000937;transcript_name=NA12877_ch_T0000937;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000937:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005636	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000937;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000937;transcript_name=NA12877_ch_T0000937;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000937:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10952174	11005468	1000	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000938;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000938;gene_name=ENSG00000291032;ID=NA12877_ch_T0000938;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10952174	10952966	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000938;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000938;transcript_name=NA12877_ch_T0000938;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000938:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10952967	10953335	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000938;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000938;transcript_name=NA12877_ch_T0000938;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000938:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10953336	10953564	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000938;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000938;transcript_name=NA12877_ch_T0000938;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000938:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11003172	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000938;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000938;transcript_name=NA12877_ch_T0000938;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000938:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000938;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000938;transcript_name=NA12877_ch_T0000938;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000938:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000938;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000938;transcript_name=NA12877_ch_T0000938;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000938:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005468	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000938;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000938;transcript_name=NA12877_ch_T0000938;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000938:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10952272	11005234	1000	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000939;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000939;gene_name=ENSG00000291032;ID=NA12877_ch_T0000939;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10952272	10953564	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000939;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000939;transcript_name=NA12877_ch_T0000939;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000939:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11003172	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000939;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000939;transcript_name=NA12877_ch_T0000939;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000939:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000939;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000939;transcript_name=NA12877_ch_T0000939;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000939:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11004643	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000939;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000939;transcript_name=NA12877_ch_T0000939;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000939:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11004644	11005234	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000939;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000939;transcript_name=NA12877_ch_T0000939;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000939:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10952272	11005416	1000	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000940;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000940;gene_name=ENSG00000291032;ID=NA12877_ch_T0000940;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10952272	10953553	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000940;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000940;transcript_name=NA12877_ch_T0000940;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000940:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953554	11003172	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000940;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000940;transcript_name=NA12877_ch_T0000940;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000940:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000940;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000940;transcript_name=NA12877_ch_T0000940;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000940:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11004774	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000940;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000940;transcript_name=NA12877_ch_T0000940;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000940:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11004775	11004884	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000940;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000940;transcript_name=NA12877_ch_T0000940;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000940:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11004885	11005366	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000940;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000940;transcript_name=NA12877_ch_T0000940;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000940:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005416	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000940;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000940;transcript_name=NA12877_ch_T0000940;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000940:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10952272	11005380	1000	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000941;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000941;gene_name=ENSG00000291032;ID=NA12877_ch_T0000941;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10952272	10953564	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000941;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000941;transcript_name=NA12877_ch_T0000941;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000941:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11003172	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000941;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000941;transcript_name=NA12877_ch_T0000941;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000941:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000941;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000941;transcript_name=NA12877_ch_T0000941;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000941:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005159	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000941;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000941;transcript_name=NA12877_ch_T0000941;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000941:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005160	11005380	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000941;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000941;transcript_name=NA12877_ch_T0000941;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000941:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10952272	11005447	1000	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000942;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000942;gene_name=ENSG00000291032;ID=NA12877_ch_T0000942;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10952272	10953564	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000942;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000942;transcript_name=NA12877_ch_T0000942;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000942:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11003172	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000942;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000942;transcript_name=NA12877_ch_T0000942;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000942:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000942;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000942;transcript_name=NA12877_ch_T0000942;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000942:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11004505	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000942;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000942;transcript_name=NA12877_ch_T0000942;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000942:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11004506	11004593	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000942;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000942;transcript_name=NA12877_ch_T0000942;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000942:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11004594	11005366	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000942;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000942;transcript_name=NA12877_ch_T0000942;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000942:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005447	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000942;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000942;transcript_name=NA12877_ch_T0000942;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000942:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10952272	11005447	1000	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000943;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000943;gene_name=ENSG00000291032;ID=NA12877_ch_T0000943;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10952272	10953564	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000943;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000943;transcript_name=NA12877_ch_T0000943;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000943:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11003172	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000943;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000943;transcript_name=NA12877_ch_T0000943;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000943:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000943;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000943;transcript_name=NA12877_ch_T0000943;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000943:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11004774	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000943;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000943;transcript_name=NA12877_ch_T0000943;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000943:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11004775	11004884	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000943;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000943;transcript_name=NA12877_ch_T0000943;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000943:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11004885	11005366	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000943;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000943;transcript_name=NA12877_ch_T0000943;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000943:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005447	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000943;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000943;transcript_name=NA12877_ch_T0000943;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000943:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10952272	11005453	1000	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000944;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000944;gene_name=ENSG00000291032;ID=NA12877_ch_T0000944;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10952272	10953564	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000944;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000944;transcript_name=NA12877_ch_T0000944;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000944:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11003172	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000944;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000944;transcript_name=NA12877_ch_T0000944;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000944:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000944;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000944;transcript_name=NA12877_ch_T0000944;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000944:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005370	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000944;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000944;transcript_name=NA12877_ch_T0000944;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000944:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005371	11005453	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000944;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000944;transcript_name=NA12877_ch_T0000944;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000944:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10952810	11005453	1000	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000945;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000945;gene_name=ENSG00000291032;ID=NA12877_ch_T0000945;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10952810	10952966	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000945;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000945;transcript_name=NA12877_ch_T0000945;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000945:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10952967	10953335	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000945;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000945;transcript_name=NA12877_ch_T0000945;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000945:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10953336	10953389	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000945;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000945;transcript_name=NA12877_ch_T0000945;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000945:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953390	10953502	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000945;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000945;transcript_name=NA12877_ch_T0000945;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000945:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10953503	10953564	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000945;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000945;transcript_name=NA12877_ch_T0000945;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000945:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11003172	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000945;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000945;transcript_name=NA12877_ch_T0000945;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000945:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000945;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000945;transcript_name=NA12877_ch_T0000945;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000945:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000945;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000945;transcript_name=NA12877_ch_T0000945;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000945:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005453	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000945;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000945;transcript_name=NA12877_ch_T0000945;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000945:4;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10952810	11005409	1000	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000946;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000946;gene_name=ENSG00000291032;ID=NA12877_ch_T0000946;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10952810	10952966	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000946;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000946;transcript_name=NA12877_ch_T0000946;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000946:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10952967	10953335	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000946;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000946;transcript_name=NA12877_ch_T0000946;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000946:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10953336	10953564	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000946;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000946;transcript_name=NA12877_ch_T0000946;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000946:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11000114	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000946;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000946;transcript_name=NA12877_ch_T0000946;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000946:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11000115	11000174	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000946;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000946;transcript_name=NA12877_ch_T0000946;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000946:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11000175	11003172	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000946;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000946;transcript_name=NA12877_ch_T0000946;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000946:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000946;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000946;transcript_name=NA12877_ch_T0000946;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000946:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000946;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000946;transcript_name=NA12877_ch_T0000946;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000946:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005409	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000946;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000946;transcript_name=NA12877_ch_T0000946;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000946:4;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10953244	11004921	1000	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000947;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000947;gene_name=ENSG00000291032;ID=NA12877_ch_T0000947;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10953244	10953564	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000947;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000947;transcript_name=NA12877_ch_T0000947;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000947:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11003172	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000947;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000947;transcript_name=NA12877_ch_T0000947;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000947:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000947;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000947;transcript_name=NA12877_ch_T0000947;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000947:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11004774	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000947;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000947;transcript_name=NA12877_ch_T0000947;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000947:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11004775	11004921	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000947;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000947;transcript_name=NA12877_ch_T0000947;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000947:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10953244	11005426	1000	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000948;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000948;gene_name=ENSG00000291032;ID=NA12877_ch_T0000948;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10953244	10953564	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000948;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000948;transcript_name=NA12877_ch_T0000948;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000948:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11000114	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000948;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000948;transcript_name=NA12877_ch_T0000948;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000948:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11000115	11000174	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000948;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000948;transcript_name=NA12877_ch_T0000948;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000948:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11000175	11003172	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000948;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000948;transcript_name=NA12877_ch_T0000948;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000948:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000948;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000948;transcript_name=NA12877_ch_T0000948;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000948:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000948;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000948;transcript_name=NA12877_ch_T0000948;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000948:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005426	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000948;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000948;transcript_name=NA12877_ch_T0000948;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000948:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10953244	11005447	1000	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000949;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000949;gene_name=ENSG00000291032;ID=NA12877_ch_T0000949;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10953244	10953389	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000949;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000949;transcript_name=NA12877_ch_T0000949;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000949:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953390	10953502	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000949;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000949;transcript_name=NA12877_ch_T0000949;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000949:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10953503	10953564	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000949;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000949;transcript_name=NA12877_ch_T0000949;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000949:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11003172	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000949;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000949;transcript_name=NA12877_ch_T0000949;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000949:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000949;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000949;transcript_name=NA12877_ch_T0000949;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000949:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000949;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000949;transcript_name=NA12877_ch_T0000949;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000949:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005447	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000949;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000949;transcript_name=NA12877_ch_T0000949;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000949:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10953281	11005412	1000	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000950;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000950;gene_name=ENSG00000291032;ID=NA12877_ch_T0000950;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10953281	10953564	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000950;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000950;transcript_name=NA12877_ch_T0000950;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000950:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11003172	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000950;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000950;transcript_name=NA12877_ch_T0000950;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000950:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000950;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000950;transcript_name=NA12877_ch_T0000950;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000950:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11004643	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000950;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000950;transcript_name=NA12877_ch_T0000950;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000950:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11004644	11004884	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000950;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000950;transcript_name=NA12877_ch_T0000950;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000950:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11004885	11005366	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000950;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000950;transcript_name=NA12877_ch_T0000950;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000950:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005412	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000950;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000950;transcript_name=NA12877_ch_T0000950;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000950:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10953281	11005447	1000	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000951;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000951;gene_name=ENSG00000291032;ID=NA12877_ch_T0000951;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10953281	10953564	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000951;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000951;transcript_name=NA12877_ch_T0000951;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000951:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	10969256	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000951;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000951;transcript_name=NA12877_ch_T0000951;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000951:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10969257	10969459	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000951;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000951;transcript_name=NA12877_ch_T0000951;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000951:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10969460	11003172	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000951;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000951;transcript_name=NA12877_ch_T0000951;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000951:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000951;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000951;transcript_name=NA12877_ch_T0000951;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000951:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000951;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000951;transcript_name=NA12877_ch_T0000951;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000951:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005447	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000951;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000951;transcript_name=NA12877_ch_T0000951;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000951:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10953281	11005434	1000	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000952;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000952;gene_name=ENSG00000291032;ID=NA12877_ch_T0000952;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10953281	10953564	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000952;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000952;transcript_name=NA12877_ch_T0000952;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000952:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10953565	11003172	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000952;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000952;transcript_name=NA12877_ch_T0000952;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000952:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000952;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000952;transcript_name=NA12877_ch_T0000952;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000952:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11004643	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000952;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000952;transcript_name=NA12877_ch_T0000952;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000952:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11004644	11004663	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000952;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000952;transcript_name=NA12877_ch_T0000952;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000952:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11004664	11005366	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000952;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000952;transcript_name=NA12877_ch_T0000952;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000952:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005434	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000952;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000952;transcript_name=NA12877_ch_T0000952;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000952:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10956378	11005456	1000	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000953;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000953;gene_name=ENSG00000291032;ID=NA12877_ch_T0000953;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10956378	10957644	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000953;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000953;transcript_name=NA12877_ch_T0000953;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000953:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10957645	11003172	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000953;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000953;transcript_name=NA12877_ch_T0000953;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000953:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000953;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000953;transcript_name=NA12877_ch_T0000953;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000953:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000953;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000953;transcript_name=NA12877_ch_T0000953;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000953:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005456	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000953;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000953;transcript_name=NA12877_ch_T0000953;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000953:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10957401	11004884	1000	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000954;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000954;gene_name=ENSG00000291032;ID=NA12877_ch_T0000954;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10957401	10957644	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000954;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000954;transcript_name=NA12877_ch_T0000954;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000954:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10957645	11003172	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000954;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000954;transcript_name=NA12877_ch_T0000954;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000954:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000954;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000954;transcript_name=NA12877_ch_T0000954;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000954:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11004774	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000954;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000954;transcript_name=NA12877_ch_T0000954;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000954:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11004775	11004884	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000954;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000954;transcript_name=NA12877_ch_T0000954;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000954:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10957403	11004884	1000	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000955;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000955;gene_name=ENSG00000291032;ID=NA12877_ch_T0000955;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10957403	10957644	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000955;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000955;transcript_name=NA12877_ch_T0000955;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000955:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10957645	11000114	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000955;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000955;transcript_name=NA12877_ch_T0000955;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000955:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11000115	11000174	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000955;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000955;transcript_name=NA12877_ch_T0000955;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000955:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11000175	11003172	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000955;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000955;transcript_name=NA12877_ch_T0000955;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000955:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000955;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000955;transcript_name=NA12877_ch_T0000955;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000955:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11004774	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000955;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000955;transcript_name=NA12877_ch_T0000955;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000955:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11004775	11004884	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000955;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000955;transcript_name=NA12877_ch_T0000955;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000955:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10957732	11005407	1000	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000956;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000956;gene_name=ENSG00000291032;ID=NA12877_ch_T0000956;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10957732	10958071	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000956;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000956;transcript_name=NA12877_ch_T0000956;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000956:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10958072	11003172	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000956;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000956;transcript_name=NA12877_ch_T0000956;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000956:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000956;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000956;transcript_name=NA12877_ch_T0000956;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000956:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000956;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000956;transcript_name=NA12877_ch_T0000956;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000956:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005407	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000956;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000956;transcript_name=NA12877_ch_T0000956;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000956:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10960005	11005452	1000	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000957;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000957;gene_name=ENSG00000291032;ID=NA12877_ch_T0000957;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10960005	10960809	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000957;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000957;transcript_name=NA12877_ch_T0000957;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000957:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10960810	11003172	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000957;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000957;transcript_name=NA12877_ch_T0000957;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000957:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000957;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000957;transcript_name=NA12877_ch_T0000957;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000957:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000957;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000957;transcript_name=NA12877_ch_T0000957;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000957:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005452	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000957;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000957;transcript_name=NA12877_ch_T0000957;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000957:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10963578	11005453	1000	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000958;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000958;gene_name=ENSG00000291032;ID=NA12877_ch_T0000958;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10963578	10963804	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000958;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000958;transcript_name=NA12877_ch_T0000958;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000958:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10963805	11003172	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000958;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000958;transcript_name=NA12877_ch_T0000958;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000958:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000958;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000958;transcript_name=NA12877_ch_T0000958;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000958:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000958;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000958;transcript_name=NA12877_ch_T0000958;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000958:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005453	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000958;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000958;transcript_name=NA12877_ch_T0000958;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000958:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10968981	11005434	1000	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000961;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000961;gene_name=ENSG00000291032;ID=NA12877_ch_T0000961;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10968981	10969459	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000961;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000961;transcript_name=NA12877_ch_T0000961;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000961:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10969460	11003172	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000961;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000961;transcript_name=NA12877_ch_T0000961;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000961:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000961;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000961;transcript_name=NA12877_ch_T0000961;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000961:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000961;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000961;transcript_name=NA12877_ch_T0000961;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000961:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005434	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000961;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000961;transcript_name=NA12877_ch_T0000961;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000961:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10993755	11005452	1000	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000962;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000962;gene_name=ENSG00000291032;ID=NA12877_ch_T0000962;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10993755	10993955	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000962;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000962;transcript_name=NA12877_ch_T0000962;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000962:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10993956	11000114	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000962;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000962;transcript_name=NA12877_ch_T0000962;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000962:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11000115	11000174	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000962;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000962;transcript_name=NA12877_ch_T0000962;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000962:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11000175	11003172	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000962;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000962;transcript_name=NA12877_ch_T0000962;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000962:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000962;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000962;transcript_name=NA12877_ch_T0000962;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000962:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000962;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000962;transcript_name=NA12877_ch_T0000962;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000962:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005452	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000962;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000962;transcript_name=NA12877_ch_T0000962;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000962:3;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10996831	11005452	1000	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000963;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000963;gene_name=ENSG00000291032;ID=NA12877_ch_T0000963;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10996831	10997110	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000963;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000963;transcript_name=NA12877_ch_T0000963;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000963:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10997111	11003172	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000963;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000963;transcript_name=NA12877_ch_T0000963;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000963:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000963;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000963;transcript_name=NA12877_ch_T0000963;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000963:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000963;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000963;transcript_name=NA12877_ch_T0000963;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000963:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005452	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000963;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000963;transcript_name=NA12877_ch_T0000963;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000963:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	10999966	11005447	1000	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000964;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000964;gene_name=ENSG00000291032;ID=NA12877_ch_T0000964;Name=ENSG00000291032
NA12877_chrY	CAT	exon	10999966	11000174	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000964;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000964;transcript_name=NA12877_ch_T0000964;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000964:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11000175	11003172	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000964;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000964;transcript_name=NA12877_ch_T0000964;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000964:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11003173	11003231	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000964;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000964;transcript_name=NA12877_ch_T0000964;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000964:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000964;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000964;transcript_name=NA12877_ch_T0000964;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000964:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005447	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000964;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000964;transcript_name=NA12877_ch_T0000964;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000964:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	11002061	11005452	1000	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000965;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000965;gene_name=ENSG00000291032;ID=NA12877_ch_T0000965;Name=ENSG00000291032
NA12877_chrY	CAT	exon	11002061	11003231	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000965;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000965;transcript_name=NA12877_ch_T0000965;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000965:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11005366	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000965;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000965;transcript_name=NA12877_ch_T0000965;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000965:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005452	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000965;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000965;transcript_name=NA12877_ch_T0000965;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000965:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	11002061	11005407	1000	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000966;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000966;gene_name=ENSG00000291032;ID=NA12877_ch_T0000966;Name=ENSG00000291032
NA12877_chrY	CAT	exon	11002061	11003231	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000966;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000966;transcript_name=NA12877_ch_T0000966;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000966:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11004774	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000966;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000966;transcript_name=NA12877_ch_T0000966;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000966:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11004775	11004884	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000966;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000966;transcript_name=NA12877_ch_T0000966;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000966:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11004885	11005366	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000966;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000966;transcript_name=NA12877_ch_T0000966;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000966:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11005367	11005407	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000966;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000966;transcript_name=NA12877_ch_T0000966;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000966:2;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	11003196	11005380	1000	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000967;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_G0000305;transcript_name=NA12877_ch_T0000967;gene_name=ENSG00000291032;ID=NA12877_ch_T0000967;Name=ENSG00000291032
NA12877_chrY	CAT	exon	11003196	11003231	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000967;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000967;transcript_name=NA12877_ch_T0000967;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000967:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11003232	11004505	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000967;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000967;transcript_name=NA12877_ch_T0000967;gene_name=ENSG00000291032;ID=intron:NA12877_ch_T0000967:0;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11004506	11005380	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=NA12877_ch_T0000967;gene_id=NA12877_ch_G0000305;Parent=NA12877_ch_T0000967;transcript_name=NA12877_ch_T0000967;gene_name=ENSG00000291032;ID=exon:NA12877_ch_T0000967:1;Name=ENSG00000291032;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10934677	10934919	.	+	.	source_gene_common_name=ENSG00000274231;source_gene=ENSG00000274231.1;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;gene_id=NA12877_ch_G0000306;gene_biotype=processed_pseudogene;gene_name=ENSG00000274231;gene_sources=liftoff;ID=NA12877_ch_G0000306;Name=ENSG00000274231
NA12877_chrY	CAT	transcript	10934677	10934919	1000	+	.	source_transcript=ENST00000619901.1;source_transcript_name=ENST00000619901;source_gene=ENSG00000274231.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274231.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619901.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274231;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;transcript_id=NA12877_ch_T0000926;gene_id=NA12877_ch_G0000306;Parent=NA12877_ch_G0000306;transcript_name=NA12877_ch_T0000926;gene_name=ENSG00000274231;ID=NA12877_ch_T0000926;Name=ENSG00000274231
NA12877_chrY	CAT	exon	10934677	10934919	.	+	.	source_transcript=ENST00000619901.1;source_transcript_name=ENST00000619901;source_gene=ENSG00000274231.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274231.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619901.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274231;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;transcript_id=NA12877_ch_T0000926;gene_id=NA12877_ch_G0000306;Parent=NA12877_ch_T0000926;transcript_name=NA12877_ch_T0000926;gene_name=ENSG00000274231;ID=exon:NA12877_ch_T0000926:0;Name=ENSG00000274231;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10944285	10949440	.	-	.	source_gene_common_name=ENSG00000278212;source_gene=ENSG00000278212.5;gene_id=NA12877_ch_G0000307;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000278212;gene_sources=liftoff;ID=NA12877_ch_G0000307;Name=ENSG00000278212
NA12877_chrY	CAT	transcript	10944285	10949440	1000	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=NA12877_ch_T0000934;gene_id=NA12877_ch_G0000307;Parent=NA12877_ch_G0000307;transcript_name=NA12877_ch_T0000934;gene_name=ENSG00000278212;ID=NA12877_ch_T0000934;Name=ENSG00000278212
NA12877_chrY	CAT	exon	10944285	10944497	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=NA12877_ch_T0000934;gene_id=NA12877_ch_G0000307;Parent=NA12877_ch_T0000934;transcript_name=NA12877_ch_T0000934;gene_name=ENSG00000278212;ID=exon:NA12877_ch_T0000934:0;Name=ENSG00000278212;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10944498	10945312	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=NA12877_ch_T0000934;gene_id=NA12877_ch_G0000307;Parent=NA12877_ch_T0000934;transcript_name=NA12877_ch_T0000934;gene_name=ENSG00000278212;ID=intron:NA12877_ch_T0000934:0;Name=ENSG00000278212;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10945313	10945467	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=NA12877_ch_T0000934;gene_id=NA12877_ch_G0000307;Parent=NA12877_ch_T0000934;transcript_name=NA12877_ch_T0000934;gene_name=ENSG00000278212;ID=exon:NA12877_ch_T0000934:1;Name=ENSG00000278212;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10945468	10946080	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=NA12877_ch_T0000934;gene_id=NA12877_ch_G0000307;Parent=NA12877_ch_T0000934;transcript_name=NA12877_ch_T0000934;gene_name=ENSG00000278212;ID=intron:NA12877_ch_T0000934:1;Name=ENSG00000278212;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10946081	10946311	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=NA12877_ch_T0000934;gene_id=NA12877_ch_G0000307;Parent=NA12877_ch_T0000934;transcript_name=NA12877_ch_T0000934;gene_name=ENSG00000278212;ID=exon:NA12877_ch_T0000934:2;Name=ENSG00000278212;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10946312	10946994	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=NA12877_ch_T0000934;gene_id=NA12877_ch_G0000307;Parent=NA12877_ch_T0000934;transcript_name=NA12877_ch_T0000934;gene_name=ENSG00000278212;ID=intron:NA12877_ch_T0000934:2;Name=ENSG00000278212;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10946995	10947115	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=NA12877_ch_T0000934;gene_id=NA12877_ch_G0000307;Parent=NA12877_ch_T0000934;transcript_name=NA12877_ch_T0000934;gene_name=ENSG00000278212;ID=exon:NA12877_ch_T0000934:3;Name=ENSG00000278212;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10947116	10947479	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=NA12877_ch_T0000934;gene_id=NA12877_ch_G0000307;Parent=NA12877_ch_T0000934;transcript_name=NA12877_ch_T0000934;gene_name=ENSG00000278212;ID=intron:NA12877_ch_T0000934:3;Name=ENSG00000278212;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10947480	10947550	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=NA12877_ch_T0000934;gene_id=NA12877_ch_G0000307;Parent=NA12877_ch_T0000934;transcript_name=NA12877_ch_T0000934;gene_name=ENSG00000278212;ID=exon:NA12877_ch_T0000934:4;Name=ENSG00000278212;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	10947551	10948963	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=NA12877_ch_T0000934;gene_id=NA12877_ch_G0000307;Parent=NA12877_ch_T0000934;transcript_name=NA12877_ch_T0000934;gene_name=ENSG00000278212;ID=intron:NA12877_ch_T0000934:4;Name=ENSG00000278212;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	10948964	10949440	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=NA12877_ch_T0000934;gene_id=NA12877_ch_G0000307;Parent=NA12877_ch_T0000934;transcript_name=NA12877_ch_T0000934;gene_name=ENSG00000278212;ID=exon:NA12877_ch_T0000934:5;Name=ENSG00000278212;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10964045	10964248	.	+	.	source_gene_common_name=ANKRD20A6P;source_gene=ENSG00000274502.1;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;gene_id=NA12877_ch_G0000308;gene_biotype=processed_pseudogene;gene_name=ANKRD20A6P;gene_sources=liftoff;ID=NA12877_ch_G0000308;Name=ANKRD20A6P
NA12877_chrY	CAT	transcript	10964045	10964248	1000	+	.	source_transcript=ENST00000618763.1;source_transcript_name=ANKRD20A6P-201;source_gene=ENSG00000274502.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274502.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618763.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD20A6P;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;transcript_id=NA12877_ch_T0000959;gene_id=NA12877_ch_G0000308;Parent=NA12877_ch_G0000308;transcript_name=NA12877_ch_T0000959;gene_name=ANKRD20A6P;ID=NA12877_ch_T0000959;Name=ANKRD20A6P
NA12877_chrY	CAT	exon	10964045	10964248	.	+	.	source_transcript=ENST00000618763.1;source_transcript_name=ANKRD20A6P-201;source_gene=ENSG00000274502.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274502.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618763.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD20A6P;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;transcript_id=NA12877_ch_T0000959;gene_id=NA12877_ch_G0000308;Parent=NA12877_ch_T0000959;transcript_name=NA12877_ch_T0000959;gene_name=ANKRD20A6P;ID=exon:NA12877_ch_T0000959:0;Name=ANKRD20A6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	10968735	10969245	.	+	.	source_gene_common_name=SNX18P1Y;source_gene=ENSG00000274162.1;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;gene_id=NA12877_ch_G0000309;gene_biotype=processed_pseudogene;gene_name=SNX18P1Y;gene_sources=liftoff;ID=NA12877_ch_G0000309;Name=SNX18P1Y
NA12877_chrY	CAT	transcript	10968735	10969245	1000	+	.	source_transcript=ENST00000616231.1;source_transcript_name=SNX18P1Y-201;source_gene=ENSG00000274162.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274162.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616231.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616231.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX18P1Y;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;transcript_id=NA12877_ch_T0000960;gene_id=NA12877_ch_G0000309;Parent=NA12877_ch_G0000309;transcript_name=NA12877_ch_T0000960;gene_name=SNX18P1Y;ID=NA12877_ch_T0000960;Name=SNX18P1Y
NA12877_chrY	CAT	exon	10968735	10969245	.	+	.	source_transcript=ENST00000616231.1;source_transcript_name=SNX18P1Y-201;source_gene=ENSG00000274162.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274162.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616231.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616231.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX18P1Y;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;transcript_id=NA12877_ch_T0000960;gene_id=NA12877_ch_G0000309;Parent=NA12877_ch_T0000960;transcript_name=NA12877_ch_T0000960;gene_name=SNX18P1Y;ID=exon:NA12877_ch_T0000960:0;Name=SNX18P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	11097362	11098625	.	+	.	source_gene_common_name=DUX4L16;source_gene=ENSG00000258567.1;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;gene_id=NA12877_ch_G0000310;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L16;gene_sources=liftoff;ID=NA12877_ch_G0000310;Name=DUX4L16
NA12877_chrY	CAT	transcript	11097362	11098625	1000	+	.	source_transcript=ENST00000555130.1;source_transcript_name=DUX4L16-201;source_gene=ENSG00000258567.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258567.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000555130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000555130.1;transcript_score=199.921;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L16;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;transcript_id=NA12877_ch_T0000968;gene_id=NA12877_ch_G0000310;Parent=NA12877_ch_G0000310;transcript_name=NA12877_ch_T0000968;gene_name=DUX4L16;ID=NA12877_ch_T0000968;Name=DUX4L16
NA12877_chrY	CAT	exon	11097362	11098625	.	+	.	source_transcript=ENST00000555130.1;source_transcript_name=DUX4L16-201;source_gene=ENSG00000258567.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258567.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000555130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000555130.1;transcript_score=199.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L16;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;transcript_id=NA12877_ch_T0000968;gene_id=NA12877_ch_G0000310;Parent=NA12877_ch_T0000968;transcript_name=NA12877_ch_T0000968;gene_name=DUX4L16;ID=exon:NA12877_ch_T0000968:0;Name=DUX4L16;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	11105365	11106631	.	+	.	source_gene_common_name=DUX4L17;source_gene=ENSG00000259154.1;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;gene_id=NA12877_ch_G0000311;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L17;gene_sources=liftoff;ID=NA12877_ch_G0000311;Name=DUX4L17
NA12877_chrY	CAT	transcript	11105365	11106631	1000	+	.	source_transcript=ENST00000557360.1;source_transcript_name=DUX4L17-201;source_gene=ENSG00000259154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557360.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L17;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;transcript_id=NA12877_ch_T0000969;gene_id=NA12877_ch_G0000311;Parent=NA12877_ch_G0000311;transcript_name=NA12877_ch_T0000969;gene_name=DUX4L17;ID=NA12877_ch_T0000969;Name=DUX4L17
NA12877_chrY	CAT	exon	11105365	11106631	.	+	.	source_transcript=ENST00000557360.1;source_transcript_name=DUX4L17-201;source_gene=ENSG00000259154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L17;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;transcript_id=NA12877_ch_T0000969;gene_id=NA12877_ch_G0000311;Parent=NA12877_ch_T0000969;transcript_name=NA12877_ch_T0000969;gene_name=DUX4L17;ID=exon:NA12877_ch_T0000969:0;Name=DUX4L17;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	11112001	11113267	.	+	.	source_gene_common_name=DUX4L18;source_gene=ENSG00000259029.1;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;gene_id=NA12877_ch_G0000312;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L18;gene_sources=liftoff;ID=NA12877_ch_G0000312;Name=DUX4L18
NA12877_chrY	CAT	transcript	11112001	11113267	1000	+	.	source_transcript=ENST00000553347.1;source_transcript_name=DUX4L18-201;source_gene=ENSG00000259029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000553347.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000553347.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L18;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;transcript_id=NA12877_ch_T0000970;gene_id=NA12877_ch_G0000312;Parent=NA12877_ch_G0000312;transcript_name=NA12877_ch_T0000970;gene_name=DUX4L18;ID=NA12877_ch_T0000970;Name=DUX4L18
NA12877_chrY	CAT	exon	11112001	11113267	.	+	.	source_transcript=ENST00000553347.1;source_transcript_name=DUX4L18-201;source_gene=ENSG00000259029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000553347.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000553347.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L18;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;transcript_id=NA12877_ch_T0000970;gene_id=NA12877_ch_G0000312;Parent=NA12877_ch_T0000970;transcript_name=NA12877_ch_T0000970;gene_name=DUX4L18;ID=exon:NA12877_ch_T0000970:0;Name=DUX4L18;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	11122773	11124039	.	+	.	source_gene_common_name=DUX4L19;source_gene=ENSG00000258991.1;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;gene_id=NA12877_ch_G0000313;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L19;gene_sources=liftoff;ID=NA12877_ch_G0000313;Name=DUX4L19
NA12877_chrY	CAT	transcript	11122773	11124039	1000	+	.	source_transcript=ENST00000557448.1;source_transcript_name=DUX4L19-201;source_gene=ENSG00000258991.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258991.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557448.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557448.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L19;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;transcript_id=NA12877_ch_T0000971;gene_id=NA12877_ch_G0000313;Parent=NA12877_ch_G0000313;transcript_name=NA12877_ch_T0000971;gene_name=DUX4L19;ID=NA12877_ch_T0000971;Name=DUX4L19
NA12877_chrY	CAT	exon	11122773	11124039	.	+	.	source_transcript=ENST00000557448.1;source_transcript_name=DUX4L19-201;source_gene=ENSG00000258991.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258991.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557448.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557448.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L19;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;transcript_id=NA12877_ch_T0000971;gene_id=NA12877_ch_G0000313;Parent=NA12877_ch_T0000971;transcript_name=NA12877_ch_T0000971;gene_name=DUX4L19;ID=exon:NA12877_ch_T0000971:0;Name=DUX4L19;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	11126071	11128137	.	+	.	source_gene_common_name=PABPC1P5;source_gene=ENSG00000270455.1;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;gene_id=NA12877_ch_G0000314;gene_biotype=processed_pseudogene;gene_name=PABPC1P5;gene_sources=liftoff;ID=NA12877_ch_G0000314;Name=PABPC1P5
NA12877_chrY	CAT	transcript	11126071	11128137	1000	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=NA12877_ch_T0000972;gene_id=NA12877_ch_G0000314;Parent=NA12877_ch_G0000314;transcript_name=NA12877_ch_T0000972;gene_name=PABPC1P5;ID=NA12877_ch_T0000972;Name=PABPC1P5
NA12877_chrY	CAT	exon	11126071	11126239	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=NA12877_ch_T0000972;gene_id=NA12877_ch_G0000314;Parent=NA12877_ch_T0000972;transcript_name=NA12877_ch_T0000972;gene_name=PABPC1P5;ID=exon:NA12877_ch_T0000972:0;Name=PABPC1P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11126240	11126630	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=NA12877_ch_T0000972;gene_id=NA12877_ch_G0000314;Parent=NA12877_ch_T0000972;transcript_name=NA12877_ch_T0000972;gene_name=PABPC1P5;ID=intron:NA12877_ch_T0000972:0;Name=PABPC1P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11126631	11128137	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=NA12877_ch_T0000972;gene_id=NA12877_ch_G0000314;Parent=NA12877_ch_T0000972;transcript_name=NA12877_ch_T0000972;gene_name=PABPC1P5;ID=exon:NA12877_ch_T0000972:1;Name=PABPC1P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	11131023	11176131	.	-	.	source_gene_common_name=SLC9B1P1;source_gene=ENSG00000183704.7;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;gene_id=NA12877_ch_G0000315;gene_biotype=unprocessed_pseudogene;gene_name=SLC9B1P1;gene_sources=liftoff;ID=NA12877_ch_G0000315;Name=SLC9B1P1
NA12877_chrY	CAT	transcript	11131023	11176131	1000	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_G0000315;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=NA12877_ch_T0000973;Name=SLC9B1P1
NA12877_chrY	CAT	exon	11131023	11131238	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=exon:NA12877_ch_T0000973:0;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11131239	11135411	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=intron:NA12877_ch_T0000973:0;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11135412	11135548	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=exon:NA12877_ch_T0000973:1;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11135549	11136435	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=intron:NA12877_ch_T0000973:1;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11136436	11136544	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=exon:NA12877_ch_T0000973:2;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11136545	11140328	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=intron:NA12877_ch_T0000973:2;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11140329	11140478	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=exon:NA12877_ch_T0000973:3;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11140479	11141320	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=intron:NA12877_ch_T0000973:3;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11141321	11141427	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=exon:NA12877_ch_T0000973:4;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11141428	11159310	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=intron:NA12877_ch_T0000973:4;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11159311	11159486	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=exon:NA12877_ch_T0000973:5;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11159487	11172071	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=intron:NA12877_ch_T0000973:5;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11172072	11172199	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=exon:NA12877_ch_T0000973:6;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11172200	11173313	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=intron:NA12877_ch_T0000973:6;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11173314	11173456	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=exon:NA12877_ch_T0000973:7;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11173457	11175960	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=intron:NA12877_ch_T0000973:7;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11175961	11176131	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=NA12877_ch_T0000973;gene_id=NA12877_ch_G0000315;Parent=NA12877_ch_T0000973;transcript_name=NA12877_ch_T0000973;gene_name=SLC9B1P1;ID=exon:NA12877_ch_T0000973:8;Name=SLC9B1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	11186143	11187520	.	+	.	source_gene_common_name=ACTR3BP1;source_gene=ENSG00000270242.1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;gene_id=NA12877_ch_G0000316;gene_biotype=processed_pseudogene;gene_name=ACTR3BP1;gene_sources=liftoff;ID=NA12877_ch_G0000316;Name=ACTR3BP1
NA12877_chrY	CAT	transcript	11186143	11187520	1000	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=NA12877_ch_T0000974;gene_id=NA12877_ch_G0000316;Parent=NA12877_ch_G0000316;transcript_name=NA12877_ch_T0000974;gene_name=ACTR3BP1;ID=NA12877_ch_T0000974;Name=ACTR3BP1
NA12877_chrY	CAT	exon	11186143	11186183	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=NA12877_ch_T0000974;gene_id=NA12877_ch_G0000316;Parent=NA12877_ch_T0000974;transcript_name=NA12877_ch_T0000974;gene_name=ACTR3BP1;ID=exon:NA12877_ch_T0000974:0;Name=ACTR3BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11186184	11186314	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=NA12877_ch_T0000974;gene_id=NA12877_ch_G0000316;Parent=NA12877_ch_T0000974;transcript_name=NA12877_ch_T0000974;gene_name=ACTR3BP1;ID=intron:NA12877_ch_T0000974:0;Name=ACTR3BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11186315	11187520	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=NA12877_ch_T0000974;gene_id=NA12877_ch_G0000316;Parent=NA12877_ch_T0000974;transcript_name=NA12877_ch_T0000974;gene_name=ACTR3BP1;ID=exon:NA12877_ch_T0000974:1;Name=ACTR3BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	11202992	11209160	.	+	.	source_gene_common_name=CHEK2P1;source_gene=ENSG00000275828.1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;gene_id=NA12877_ch_G0000317;gene_biotype=unprocessed_pseudogene;gene_name=CHEK2P1;gene_sources=liftoff;ID=NA12877_ch_G0000317;Name=CHEK2P1
NA12877_chrY	CAT	transcript	11202992	11209160	1000	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=NA12877_ch_T0000975;gene_id=NA12877_ch_G0000317;Parent=NA12877_ch_G0000317;transcript_name=NA12877_ch_T0000975;gene_name=CHEK2P1;ID=NA12877_ch_T0000975;Name=CHEK2P1
NA12877_chrY	CAT	exon	11202992	11203077	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=NA12877_ch_T0000975;gene_id=NA12877_ch_G0000317;Parent=NA12877_ch_T0000975;transcript_name=NA12877_ch_T0000975;gene_name=CHEK2P1;ID=exon:NA12877_ch_T0000975:0;Name=CHEK2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11203078	11207840	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=NA12877_ch_T0000975;gene_id=NA12877_ch_G0000317;Parent=NA12877_ch_T0000975;transcript_name=NA12877_ch_T0000975;gene_name=CHEK2P1;ID=intron:NA12877_ch_T0000975:0;Name=CHEK2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11207841	11207921	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=NA12877_ch_T0000975;gene_id=NA12877_ch_G0000317;Parent=NA12877_ch_T0000975;transcript_name=NA12877_ch_T0000975;gene_name=CHEK2P1;ID=exon:NA12877_ch_T0000975:1;Name=CHEK2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11207922	11209073	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=NA12877_ch_T0000975;gene_id=NA12877_ch_G0000317;Parent=NA12877_ch_T0000975;transcript_name=NA12877_ch_T0000975;gene_name=CHEK2P1;ID=intron:NA12877_ch_T0000975:1;Name=CHEK2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11209074	11209160	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=NA12877_ch_T0000975;gene_id=NA12877_ch_G0000317;Parent=NA12877_ch_T0000975;transcript_name=NA12877_ch_T0000975;gene_name=CHEK2P1;ID=exon:NA12877_ch_T0000975:2;Name=CHEK2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	11235862	11236008	.	-	.	source_gene_common_name=MTND1P12;source_gene=ENSG00000225433.3;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;gene_id=NA12877_ch_G0000318;gene_biotype=unprocessed_pseudogene;gene_name=MTND1P12;gene_sources=liftoff;ID=NA12877_ch_G0000318;Name=MTND1P12
NA12877_chrY	CAT	transcript	11235862	11236008	1000	-	.	source_transcript=ENST00000455231.3;source_transcript_name=MTND1P12-201;source_gene=ENSG00000225433.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225433.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455231.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000455231.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P12;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;transcript_id=NA12877_ch_T0000976;gene_id=NA12877_ch_G0000318;Parent=NA12877_ch_G0000318;transcript_name=NA12877_ch_T0000976;gene_name=MTND1P12;ID=NA12877_ch_T0000976;Name=MTND1P12
NA12877_chrY	CAT	exon	11235862	11236008	.	-	.	source_transcript=ENST00000455231.3;source_transcript_name=MTND1P12-201;source_gene=ENSG00000225433.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225433.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455231.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000455231.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P12;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;transcript_id=NA12877_ch_T0000976;gene_id=NA12877_ch_G0000318;Parent=NA12877_ch_T0000976;transcript_name=NA12877_ch_T0000976;gene_name=MTND1P12;ID=exon:NA12877_ch_T0000976:0;Name=MTND1P12;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	11236152	11236545	.	-	.	source_gene_common_name=ENSG00000224567;source_gene=ENSG00000224567.2;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;gene_id=NA12877_ch_G0000319;gene_biotype=processed_pseudogene;gene_name=ENSG00000224567;gene_sources=liftoff;ID=NA12877_ch_G0000319;Name=ENSG00000224567
NA12877_chrY	CAT	transcript	11236152	11236545	1000	-	.	source_transcript=ENST00000426062.2;source_transcript_name=ENST00000426062;source_gene=ENSG00000224567.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224567.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000426062.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426062.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224567;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;transcript_id=NA12877_ch_T0000977;gene_id=NA12877_ch_G0000319;Parent=NA12877_ch_G0000319;transcript_name=NA12877_ch_T0000977;gene_name=ENSG00000224567;ID=NA12877_ch_T0000977;Name=ENSG00000224567
NA12877_chrY	CAT	exon	11236152	11236545	.	-	.	source_transcript=ENST00000426062.2;source_transcript_name=ENST00000426062;source_gene=ENSG00000224567.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224567.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000426062.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426062.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224567;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;transcript_id=NA12877_ch_T0000977;gene_id=NA12877_ch_G0000319;Parent=NA12877_ch_T0000977;transcript_name=NA12877_ch_T0000977;gene_name=ENSG00000224567;ID=exon:NA12877_ch_T0000977:0;Name=ENSG00000224567;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	11264172	11264682	.	-	.	source_gene_common_name=ENSG00000271375;source_gene=ENSG00000271375.1;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;gene_id=NA12877_ch_G0000320;gene_biotype=processed_pseudogene;gene_name=ENSG00000271375;gene_sources=liftoff;ID=NA12877_ch_G0000320;Name=ENSG00000271375
NA12877_chrY	CAT	transcript	11264172	11264682	1000	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=NA12877_ch_T0000978;gene_id=NA12877_ch_G0000320;Parent=NA12877_ch_G0000320;transcript_name=NA12877_ch_T0000978;gene_name=ENSG00000271375;ID=NA12877_ch_T0000978;Name=ENSG00000271375
NA12877_chrY	CAT	exon	11264172	11264502	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=NA12877_ch_T0000978;gene_id=NA12877_ch_G0000320;Parent=NA12877_ch_T0000978;transcript_name=NA12877_ch_T0000978;gene_name=ENSG00000271375;ID=exon:NA12877_ch_T0000978:0;Name=ENSG00000271375;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	11264503	11264624	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=NA12877_ch_T0000978;gene_id=NA12877_ch_G0000320;Parent=NA12877_ch_T0000978;transcript_name=NA12877_ch_T0000978;gene_name=ENSG00000271375;ID=intron:NA12877_ch_T0000978:0;Name=ENSG00000271375;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	11264625	11264682	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=NA12877_ch_T0000978;gene_id=NA12877_ch_G0000320;Parent=NA12877_ch_T0000978;transcript_name=NA12877_ch_T0000978;gene_name=ENSG00000271375;ID=exon:NA12877_ch_T0000978:1;Name=ENSG00000271375;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	12379934	12381409	.	-	.	source_gene_common_name=RCC2P1;source_gene=ENSG00000234385.1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;gene_id=NA12877_ch_G0000321;gene_biotype=processed_pseudogene;gene_name=RCC2P1;gene_sources=liftoff;ID=NA12877_ch_G0000321;Name=RCC2P1
NA12877_chrY	CAT	transcript	12379934	12381409	1000	-	.	source_transcript=ENST00000452257.1;source_transcript_name=RCC2P1-201;source_gene=ENSG00000234385.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234385.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452257.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452257.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;transcript_id=NA12877_ch_T0000979;gene_id=NA12877_ch_G0000321;Parent=NA12877_ch_G0000321;transcript_name=NA12877_ch_T0000979;gene_name=RCC2P1;ID=NA12877_ch_T0000979;Name=RCC2P1
NA12877_chrY	CAT	exon	12379934	12381409	.	-	.	source_transcript=ENST00000452257.1;source_transcript_name=RCC2P1-201;source_gene=ENSG00000234385.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234385.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452257.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452257.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;transcript_id=NA12877_ch_T0000979;gene_id=NA12877_ch_G0000321;Parent=NA12877_ch_T0000979;transcript_name=NA12877_ch_T0000979;gene_name=RCC2P1;ID=exon:NA12877_ch_T0000979:0;Name=RCC2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	12521432	12522665	.	-	.	source_gene_common_name=ASS1P6;source_gene=ENSG00000215583.3;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;gene_id=NA12877_ch_G0000322;gene_biotype=processed_pseudogene;gene_name=ASS1P6;gene_sources=liftoff;ID=NA12877_ch_G0000322;Name=ASS1P6
NA12877_chrY	CAT	transcript	12521432	12522665	1000	-	.	source_transcript=ENST00000421118.1;source_transcript_name=ASS1P6-201;source_gene=ENSG00000215583.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215583.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000421118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421118.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASS1P6;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;transcript_id=NA12877_ch_T0000980;gene_id=NA12877_ch_G0000322;Parent=NA12877_ch_G0000322;transcript_name=NA12877_ch_T0000980;gene_name=ASS1P6;ID=NA12877_ch_T0000980;Name=ASS1P6
NA12877_chrY	CAT	exon	12521432	12522665	.	-	.	source_transcript=ENST00000421118.1;source_transcript_name=ASS1P6-201;source_gene=ENSG00000215583.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215583.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000421118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421118.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASS1P6;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;transcript_id=NA12877_ch_T0000980;gene_id=NA12877_ch_G0000322;Parent=NA12877_ch_T0000980;transcript_name=NA12877_ch_T0000980;gene_name=ASS1P6;ID=exon:NA12877_ch_T0000980:0;Name=ASS1P6;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	12556105	12586276	.	+	.	source_gene_common_name=MXRA5Y;source_gene=ENSG00000235649.2;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;gene_id=NA12877_ch_G0000323;gene_biotype=unprocessed_pseudogene;gene_name=MXRA5Y;gene_sources=liftoff;ID=NA12877_ch_G0000323;Name=MXRA5Y
NA12877_chrY	CAT	transcript	12556105	12586276	1000	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=NA12877_ch_T0000981;gene_id=NA12877_ch_G0000323;Parent=NA12877_ch_G0000323;transcript_name=NA12877_ch_T0000981;gene_name=MXRA5Y;ID=NA12877_ch_T0000981;Name=MXRA5Y
NA12877_chrY	CAT	exon	12556105	12556296	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=NA12877_ch_T0000981;gene_id=NA12877_ch_G0000323;Parent=NA12877_ch_T0000981;transcript_name=NA12877_ch_T0000981;gene_name=MXRA5Y;ID=exon:NA12877_ch_T0000981:0;Name=MXRA5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12556297	12566974	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=NA12877_ch_T0000981;gene_id=NA12877_ch_G0000323;Parent=NA12877_ch_T0000981;transcript_name=NA12877_ch_T0000981;gene_name=MXRA5Y;ID=intron:NA12877_ch_T0000981:0;Name=MXRA5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12566975	12571932	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=NA12877_ch_T0000981;gene_id=NA12877_ch_G0000323;Parent=NA12877_ch_T0000981;transcript_name=NA12877_ch_T0000981;gene_name=MXRA5Y;ID=exon:NA12877_ch_T0000981:1;Name=MXRA5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12571933	12577805	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=NA12877_ch_T0000981;gene_id=NA12877_ch_G0000323;Parent=NA12877_ch_T0000981;transcript_name=NA12877_ch_T0000981;gene_name=MXRA5Y;ID=intron:NA12877_ch_T0000981:1;Name=MXRA5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12577806	12578749	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=NA12877_ch_T0000981;gene_id=NA12877_ch_G0000323;Parent=NA12877_ch_T0000981;transcript_name=NA12877_ch_T0000981;gene_name=MXRA5Y;ID=exon:NA12877_ch_T0000981:2;Name=MXRA5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12578750	12584370	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=NA12877_ch_T0000981;gene_id=NA12877_ch_G0000323;Parent=NA12877_ch_T0000981;transcript_name=NA12877_ch_T0000981;gene_name=MXRA5Y;ID=intron:NA12877_ch_T0000981:2;Name=MXRA5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12584371	12586276	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=NA12877_ch_T0000981;gene_id=NA12877_ch_G0000323;Parent=NA12877_ch_T0000981;transcript_name=NA12877_ch_T0000981;gene_name=MXRA5Y;ID=exon:NA12877_ch_T0000981:3;Name=MXRA5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	12687400	13031334	.	-	.	source_gene_common_name=ENSG00000291034;source_gene=ENSG00000291034.2;gene_id=NA12877_ch_G0000324;gene_biotype=lncRNA;gene_name=ENSG00000291034;gene_sources=liftoff;ID=NA12877_ch_G0000324;Name=ENSG00000291034
NA12877_chrY	CAT	transcript	12687400	13020967	1000	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=NA12877_ch_T0000982;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12687400	12688675	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000982:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12688676	12710235	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000982:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12710236	12710336	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000982:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12710337	12714589	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000982:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12714590	12714703	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000982:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12714704	12802386	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000982:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12802387	12802511	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000982:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12802512	12809550	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000982:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12809551	12809649	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000982:4;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12809650	12840756	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000982:4;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12840757	12840794	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000982:5;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12840795	13005972	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000982:5;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13005973	13006089	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000982:6;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006090	13006384	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000982:6;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000982:7;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000982:7;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000982:8;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13020915	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000982:8;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13020916	13020967	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000982;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000982;transcript_name=NA12877_ch_T0000982;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000982:9;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12805102	13021176	1000	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=NA12877_ch_T0000983;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12805102	12805969	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000983:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12805970	12840756	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000983:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12840757	12840794	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000983:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12840795	12853371	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000983:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12853372	12853493	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000983:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12853494	12857267	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000983:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12857268	12857417	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000983:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12857418	13006384	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000983:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000983:4;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000983:4;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000983:5;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13021138	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000983:5;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13021139	13021176	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000983;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000983;transcript_name=NA12877_ch_T0000983;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000983:6;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12925779	13021153	1000	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000988;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0000988;gene_name=ENSG00000291034;ID=NA12877_ch_T0000988;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12925779	12926062	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000988;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000988;transcript_name=NA12877_ch_T0000988;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000988:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12926063	13006384	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000988;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000988;transcript_name=NA12877_ch_T0000988;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000988:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000988;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000988;transcript_name=NA12877_ch_T0000988;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000988:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000988;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000988;transcript_name=NA12877_ch_T0000988;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000988:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000988;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000988;transcript_name=NA12877_ch_T0000988;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000988:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13021028	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000988;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000988;transcript_name=NA12877_ch_T0000988;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000988:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13021029	13021153	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000988;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000988;transcript_name=NA12877_ch_T0000988;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000988:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12925779	13021187	1000	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000989;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0000989;gene_name=ENSG00000291034;ID=NA12877_ch_T0000989;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12925779	12926062	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000989;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000989;transcript_name=NA12877_ch_T0000989;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000989:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12926063	13006384	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000989;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000989;transcript_name=NA12877_ch_T0000989;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000989:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000989;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000989;transcript_name=NA12877_ch_T0000989;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000989:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000989;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000989;transcript_name=NA12877_ch_T0000989;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000989:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000989;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000989;transcript_name=NA12877_ch_T0000989;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000989:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13021138	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000989;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000989;transcript_name=NA12877_ch_T0000989;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000989:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13021139	13021187	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000989;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000989;transcript_name=NA12877_ch_T0000989;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000989:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12925781	13021139	1000	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000990;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0000990;gene_name=ENSG00000291034;ID=NA12877_ch_T0000990;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12925781	12926062	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000990;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000990;transcript_name=NA12877_ch_T0000990;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000990:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12926063	13005972	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000990;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000990;transcript_name=NA12877_ch_T0000990;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000990:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13005973	13006089	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000990;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000990;transcript_name=NA12877_ch_T0000990;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000990:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006090	13006384	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000990;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000990;transcript_name=NA12877_ch_T0000990;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000990:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000990;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000990;transcript_name=NA12877_ch_T0000990;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000990:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000990;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000990;transcript_name=NA12877_ch_T0000990;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000990:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000990;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000990;transcript_name=NA12877_ch_T0000990;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000990:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13021028	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000990;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000990;transcript_name=NA12877_ch_T0000990;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000990:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13021029	13021139	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000990;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000990;transcript_name=NA12877_ch_T0000990;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000990:4;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12939135	13021173	1000	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000994;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0000994;gene_name=ENSG00000291034;ID=NA12877_ch_T0000994;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12939135	12939342	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000994;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000994;transcript_name=NA12877_ch_T0000994;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000994:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12939343	13006384	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000994;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000994;transcript_name=NA12877_ch_T0000994;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000994:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000994;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000994;transcript_name=NA12877_ch_T0000994;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000994:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000994;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000994;transcript_name=NA12877_ch_T0000994;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000994:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000994;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000994;transcript_name=NA12877_ch_T0000994;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000994:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13021138	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000994;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000994;transcript_name=NA12877_ch_T0000994;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000994:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13021139	13021173	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000994;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000994;transcript_name=NA12877_ch_T0000994;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000994:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12953808	13021173	1000	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000998;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0000998;gene_name=ENSG00000291034;ID=NA12877_ch_T0000998;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12953808	12954167	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000998;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000998;transcript_name=NA12877_ch_T0000998;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000998:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12954168	13006384	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000998;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000998;transcript_name=NA12877_ch_T0000998;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000998:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000998;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000998;transcript_name=NA12877_ch_T0000998;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000998:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000998;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000998;transcript_name=NA12877_ch_T0000998;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000998:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000998;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000998;transcript_name=NA12877_ch_T0000998;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000998:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13021138	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000998;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000998;transcript_name=NA12877_ch_T0000998;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000998:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13021139	13021173	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000998;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000998;transcript_name=NA12877_ch_T0000998;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000998:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12953812	13020045	1000	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000999;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0000999;gene_name=ENSG00000291034;ID=NA12877_ch_T0000999;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12953812	12954167	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000999;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000999;transcript_name=NA12877_ch_T0000999;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000999:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12954168	13006384	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000999;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000999;transcript_name=NA12877_ch_T0000999;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000999:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000999;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000999;transcript_name=NA12877_ch_T0000999;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000999:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000999;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000999;transcript_name=NA12877_ch_T0000999;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0000999:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020045	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0000999;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0000999;transcript_name=NA12877_ch_T0000999;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0000999:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12978114	13021148	1000	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001000;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001000;gene_name=ENSG00000291034;ID=NA12877_ch_T0001000;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12978114	12978342	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001000;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001000;transcript_name=NA12877_ch_T0001000;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001000:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12978343	13006384	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001000;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001000;transcript_name=NA12877_ch_T0001000;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001000:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001000;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001000;transcript_name=NA12877_ch_T0001000;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001000:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001000;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001000;transcript_name=NA12877_ch_T0001000;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001000:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001000;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001000;transcript_name=NA12877_ch_T0001000;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001000:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13021028	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001000;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001000;transcript_name=NA12877_ch_T0001000;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001000:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13021029	13021148	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001000;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001000;transcript_name=NA12877_ch_T0001000;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001000:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12978114	13021211	1000	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001001;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001001;gene_name=ENSG00000291034;ID=NA12877_ch_T0001001;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12978114	12978342	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001001;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001001;transcript_name=NA12877_ch_T0001001;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001001:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12978343	13006384	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001001;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001001;transcript_name=NA12877_ch_T0001001;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001001:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001001;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001001;transcript_name=NA12877_ch_T0001001;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001001:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001001;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001001;transcript_name=NA12877_ch_T0001001;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001001:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001001;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001001;transcript_name=NA12877_ch_T0001001;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001001:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13021138	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001001;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001001;transcript_name=NA12877_ch_T0001001;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001001:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13021139	13021211	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001001;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001001;transcript_name=NA12877_ch_T0001001;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001001:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12978114	13021151	1000	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001002;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001002;gene_name=ENSG00000291034;ID=NA12877_ch_T0001002;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12978114	12978342	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001002;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001002;transcript_name=NA12877_ch_T0001002;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001002:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12978343	12981771	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001002;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001002;transcript_name=NA12877_ch_T0001002;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001002:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12981772	12981920	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001002;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001002;transcript_name=NA12877_ch_T0001002;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001002:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12981921	13006384	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001002;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001002;transcript_name=NA12877_ch_T0001002;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001002:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001002;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001002;transcript_name=NA12877_ch_T0001002;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001002:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001002;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001002;transcript_name=NA12877_ch_T0001002;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001002:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001002;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001002;transcript_name=NA12877_ch_T0001002;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001002:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13021028	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001002;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001002;transcript_name=NA12877_ch_T0001002;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001002:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13021029	13021151	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001002;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001002;transcript_name=NA12877_ch_T0001002;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001002:4;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12978114	13020918	1000	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001003;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001003;gene_name=ENSG00000291034;ID=NA12877_ch_T0001003;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12978114	12978342	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001003;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001003;transcript_name=NA12877_ch_T0001003;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001003:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12978343	13006384	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001003;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001003;transcript_name=NA12877_ch_T0001003;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001003:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001003;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001003;transcript_name=NA12877_ch_T0001003;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001003:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001003;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001003;transcript_name=NA12877_ch_T0001003;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001003:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001003;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001003;transcript_name=NA12877_ch_T0001003;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001003:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13020799	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001003;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001003;transcript_name=NA12877_ch_T0001003;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001003:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13020800	13020918	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001003;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001003;transcript_name=NA12877_ch_T0001003;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001003:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12978125	13021220	1000	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001004;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001004;gene_name=ENSG00000291034;ID=NA12877_ch_T0001004;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12978125	12978342	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001004;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001004;transcript_name=NA12877_ch_T0001004;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001004:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12978343	12981771	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001004;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001004;transcript_name=NA12877_ch_T0001004;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001004:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12981772	12981920	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001004;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001004;transcript_name=NA12877_ch_T0001004;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001004:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12981921	13006384	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001004;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001004;transcript_name=NA12877_ch_T0001004;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001004:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001004;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001004;transcript_name=NA12877_ch_T0001004;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001004:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001004;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001004;transcript_name=NA12877_ch_T0001004;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001004:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001004;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001004;transcript_name=NA12877_ch_T0001004;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001004:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13021138	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001004;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001004;transcript_name=NA12877_ch_T0001004;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001004:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13021139	13021220	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001004;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001004;transcript_name=NA12877_ch_T0001004;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001004:4;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12978127	13021166	1000	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001005;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001005;gene_name=ENSG00000291034;ID=NA12877_ch_T0001005;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12978127	12978342	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001005;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001005;transcript_name=NA12877_ch_T0001005;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001005:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12978343	12998272	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001005;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001005;transcript_name=NA12877_ch_T0001005;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001005:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12998273	12998410	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001005;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001005;transcript_name=NA12877_ch_T0001005;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001005:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12998411	13006384	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001005;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001005;transcript_name=NA12877_ch_T0001005;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001005:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001005;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001005;transcript_name=NA12877_ch_T0001005;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001005:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001005;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001005;transcript_name=NA12877_ch_T0001005;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001005:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001005;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001005;transcript_name=NA12877_ch_T0001005;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001005:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13021138	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001005;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001005;transcript_name=NA12877_ch_T0001005;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001005:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13021139	13021166	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001005;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001005;transcript_name=NA12877_ch_T0001005;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001005:4;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12978129	13020514	1000	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001006;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001006;gene_name=ENSG00000291034;ID=NA12877_ch_T0001006;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12978129	12978342	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001006;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001006;transcript_name=NA12877_ch_T0001006;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001006:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12978343	13006384	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001006;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001006;transcript_name=NA12877_ch_T0001006;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001006:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001006;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001006;transcript_name=NA12877_ch_T0001006;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001006:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001006;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001006;transcript_name=NA12877_ch_T0001006;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001006:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001006;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001006;transcript_name=NA12877_ch_T0001006;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001006:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13020481	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001006;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001006;transcript_name=NA12877_ch_T0001006;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001006:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13020482	13020514	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001006;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001006;transcript_name=NA12877_ch_T0001006;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001006:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12978130	13020712	1000	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001007;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001007;gene_name=ENSG00000291034;ID=NA12877_ch_T0001007;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12978130	12978342	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001007;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001007;transcript_name=NA12877_ch_T0001007;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001007:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12978343	13006384	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001007;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001007;transcript_name=NA12877_ch_T0001007;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001007:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001007;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001007;transcript_name=NA12877_ch_T0001007;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001007:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001007;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001007;transcript_name=NA12877_ch_T0001007;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001007:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001007;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001007;transcript_name=NA12877_ch_T0001007;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001007:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13020656	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001007;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001007;transcript_name=NA12877_ch_T0001007;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001007:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13020657	13020712	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001007;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001007;transcript_name=NA12877_ch_T0001007;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001007:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12978130	13020043	1000	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001008;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001008;gene_name=ENSG00000291034;ID=NA12877_ch_T0001008;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12978130	12978342	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001008;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001008;transcript_name=NA12877_ch_T0001008;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001008:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12978343	12981771	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001008;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001008;transcript_name=NA12877_ch_T0001008;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001008:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12981772	12981920	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001008;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001008;transcript_name=NA12877_ch_T0001008;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001008:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12981921	13005972	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001008;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001008;transcript_name=NA12877_ch_T0001008;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001008:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13005973	13006089	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001008;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001008;transcript_name=NA12877_ch_T0001008;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001008:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006090	13006384	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001008;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001008;transcript_name=NA12877_ch_T0001008;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001008:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001008;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001008;transcript_name=NA12877_ch_T0001008;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001008:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001008;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001008;transcript_name=NA12877_ch_T0001008;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001008:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001008;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001008;transcript_name=NA12877_ch_T0001008;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001008:4;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12978784	13031257	1000	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001009;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001009;gene_name=ENSG00000291034;ID=NA12877_ch_T0001009;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12978784	12979437	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001009;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001009;transcript_name=NA12877_ch_T0001009;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001009:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12979438	13006384	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001009;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001009;transcript_name=NA12877_ch_T0001009;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001009:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001009;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001009;transcript_name=NA12877_ch_T0001009;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001009:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13006781	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001009;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001009;transcript_name=NA12877_ch_T0001009;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001009:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006782	13006898	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001009;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001009;transcript_name=NA12877_ch_T0001009;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001009:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006899	13031229	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001009;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001009;transcript_name=NA12877_ch_T0001009;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001009:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13031230	13031257	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001009;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001009;transcript_name=NA12877_ch_T0001009;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001009:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12982782	13017883	1000	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001010;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001010;gene_name=ENSG00000291034;ID=NA12877_ch_T0001010;Name=ENSG00000291034
NA12877_chrY	CAT	exon	12982782	12982923	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001010;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001010;transcript_name=NA12877_ch_T0001010;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001010:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12982924	12998272	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001010;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001010;transcript_name=NA12877_ch_T0001010;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001010:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12998273	12998410	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001010;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001010;transcript_name=NA12877_ch_T0001010;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001010:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12998411	13006384	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001010;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001010;transcript_name=NA12877_ch_T0001010;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001010:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001010;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001010;transcript_name=NA12877_ch_T0001010;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001010:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13006781	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001010;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001010;transcript_name=NA12877_ch_T0001010;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001010:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006782	13006898	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001010;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001010;transcript_name=NA12877_ch_T0001010;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001010:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006899	13017478	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001010;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001010;transcript_name=NA12877_ch_T0001010;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001010:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13017479	13017883	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001010;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001010;transcript_name=NA12877_ch_T0001010;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001010:4;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13001581	13021173	1000	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001011;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001011;gene_name=ENSG00000291034;ID=NA12877_ch_T0001011;Name=ENSG00000291034
NA12877_chrY	CAT	exon	13001581	13002183	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001011;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001011;transcript_name=NA12877_ch_T0001011;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001011:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13002184	13006384	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001011;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001011;transcript_name=NA12877_ch_T0001011;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001011:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001011;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001011;transcript_name=NA12877_ch_T0001011;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001011:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001011;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001011;transcript_name=NA12877_ch_T0001011;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001011:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001011;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001011;transcript_name=NA12877_ch_T0001011;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001011:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13021138	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001011;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001011;transcript_name=NA12877_ch_T0001011;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001011:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13021139	13021173	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001011;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001011;transcript_name=NA12877_ch_T0001011;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001011:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13001584	13020843	1000	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001012;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001012;gene_name=ENSG00000291034;ID=NA12877_ch_T0001012;Name=ENSG00000291034
NA12877_chrY	CAT	exon	13001584	13002183	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001012;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001012;transcript_name=NA12877_ch_T0001012;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001012:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13002184	13006384	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001012;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001012;transcript_name=NA12877_ch_T0001012;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001012:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001012;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001012;transcript_name=NA12877_ch_T0001012;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001012:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001012;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001012;transcript_name=NA12877_ch_T0001012;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001012:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001012;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001012;transcript_name=NA12877_ch_T0001012;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001012:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13020799	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001012;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001012;transcript_name=NA12877_ch_T0001012;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001012:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13020800	13020843	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001012;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001012;transcript_name=NA12877_ch_T0001012;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001012:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13001844	13020045	1000	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001013;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001013;gene_name=ENSG00000291034;ID=NA12877_ch_T0001013;Name=ENSG00000291034
NA12877_chrY	CAT	exon	13001844	13002183	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001013;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001013;transcript_name=NA12877_ch_T0001013;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001013:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13002184	13006384	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001013;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001013;transcript_name=NA12877_ch_T0001013;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001013:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001013;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001013;transcript_name=NA12877_ch_T0001013;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001013:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001013;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001013;transcript_name=NA12877_ch_T0001013;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001013:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020045	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001013;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001013;transcript_name=NA12877_ch_T0001013;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001013:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13005707	13020963	1000	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001014;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001014;gene_name=ENSG00000291034;ID=NA12877_ch_T0001014;Name=ENSG00000291034
NA12877_chrY	CAT	exon	13005707	13006089	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001014;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001014;transcript_name=NA12877_ch_T0001014;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001014:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006090	13006384	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001014;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001014;transcript_name=NA12877_ch_T0001014;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001014:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001014;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001014;transcript_name=NA12877_ch_T0001014;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001014:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001014;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001014;transcript_name=NA12877_ch_T0001014;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001014:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13020043	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001014;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001014;transcript_name=NA12877_ch_T0001014;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001014:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13020044	13020915	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001014;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001014;transcript_name=NA12877_ch_T0001014;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001014:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13020916	13020963	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001014;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001014;transcript_name=NA12877_ch_T0001014;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001014:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13005712	13019961	1000	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001015;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001015;gene_name=ENSG00000291034;ID=NA12877_ch_T0001015;Name=ENSG00000291034
NA12877_chrY	CAT	exon	13005712	13006089	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001015;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001015;transcript_name=NA12877_ch_T0001015;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001015:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006090	13006384	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001015;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001015;transcript_name=NA12877_ch_T0001015;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001015:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001015;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001015;transcript_name=NA12877_ch_T0001015;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001015:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13006781	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001015;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001015;transcript_name=NA12877_ch_T0001015;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001015:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13006782	13006898	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001015;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001015;transcript_name=NA12877_ch_T0001015;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001015:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006899	13019904	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001015;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001015;transcript_name=NA12877_ch_T0001015;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001015:2;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13019961	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001015;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001015;transcript_name=NA12877_ch_T0001015;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001015:3;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13025003	13031334	1000	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001017;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_G0000324;transcript_name=NA12877_ch_T0001017;gene_name=ENSG00000291034;ID=NA12877_ch_T0001017;Name=ENSG00000291034
NA12877_chrY	CAT	exon	13025003	13025409	.	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001017;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001017;transcript_name=NA12877_ch_T0001017;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001017:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13025410	13031229	.	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001017;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001017;transcript_name=NA12877_ch_T0001017;gene_name=ENSG00000291034;ID=intron:NA12877_ch_T0001017:0;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13031230	13031334	.	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=NA12877_ch_T0001017;gene_id=NA12877_ch_G0000324;Parent=NA12877_ch_T0001017;transcript_name=NA12877_ch_T0001017;gene_name=ENSG00000291034;ID=exon:NA12877_ch_T0001017:1;Name=ENSG00000291034;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	12844138	12844843	.	+	.	source_gene_common_name=RPS24P1;source_gene=ENSG00000236477.1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;gene_id=NA12877_ch_G0000325;gene_biotype=processed_pseudogene;gene_name=RPS24P1;gene_sources=liftoff;ID=NA12877_ch_G0000325;Name=RPS24P1
NA12877_chrY	CAT	transcript	12844138	12844843	1000	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=NA12877_ch_T0000984;gene_id=NA12877_ch_G0000325;Parent=NA12877_ch_G0000325;transcript_name=NA12877_ch_T0000984;gene_name=RPS24P1;ID=NA12877_ch_T0000984;Name=RPS24P1
NA12877_chrY	CAT	exon	12844138	12844263	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=NA12877_ch_T0000984;gene_id=NA12877_ch_G0000325;Parent=NA12877_ch_T0000984;transcript_name=NA12877_ch_T0000984;gene_name=RPS24P1;ID=exon:NA12877_ch_T0000984:0;Name=RPS24P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12844264	12844598	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=NA12877_ch_T0000984;gene_id=NA12877_ch_G0000325;Parent=NA12877_ch_T0000984;transcript_name=NA12877_ch_T0000984;gene_name=RPS24P1;ID=intron:NA12877_ch_T0000984:0;Name=RPS24P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12844599	12844843	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=NA12877_ch_T0000984;gene_id=NA12877_ch_G0000325;Parent=NA12877_ch_T0000984;transcript_name=NA12877_ch_T0000984;gene_name=RPS24P1;ID=exon:NA12877_ch_T0000984:1;Name=RPS24P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	12851707	12857419	.	-	.	source_gene_common_name=ARSFP1;source_gene=ENSG00000232226.2;gene_id=NA12877_ch_G0000326;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ARSFP1;gene_sources=liftoff;ID=NA12877_ch_G0000326;Name=ARSFP1
NA12877_chrY	CAT	transcript	12851707	12857419	1000	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=NA12877_ch_T0000985;gene_id=NA12877_ch_G0000326;Parent=NA12877_ch_G0000326;transcript_name=NA12877_ch_T0000985;gene_name=ARSFP1;ID=NA12877_ch_T0000985;Name=ARSFP1
NA12877_chrY	CAT	exon	12851707	12851904	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=NA12877_ch_T0000985;gene_id=NA12877_ch_G0000326;Parent=NA12877_ch_T0000985;transcript_name=NA12877_ch_T0000985;gene_name=ARSFP1;ID=exon:NA12877_ch_T0000985:0;Name=ARSFP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12851905	12853366	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=NA12877_ch_T0000985;gene_id=NA12877_ch_G0000326;Parent=NA12877_ch_T0000985;transcript_name=NA12877_ch_T0000985;gene_name=ARSFP1;ID=intron:NA12877_ch_T0000985:0;Name=ARSFP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12853367	12853493	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=NA12877_ch_T0000985;gene_id=NA12877_ch_G0000326;Parent=NA12877_ch_T0000985;transcript_name=NA12877_ch_T0000985;gene_name=ARSFP1;ID=exon:NA12877_ch_T0000985:1;Name=ARSFP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12853494	12857267	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=NA12877_ch_T0000985;gene_id=NA12877_ch_G0000326;Parent=NA12877_ch_T0000985;transcript_name=NA12877_ch_T0000985;gene_name=ARSFP1;ID=intron:NA12877_ch_T0000985:1;Name=ARSFP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12857268	12857419	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=NA12877_ch_T0000985;gene_id=NA12877_ch_G0000326;Parent=NA12877_ch_T0000985;transcript_name=NA12877_ch_T0000985;gene_name=ARSFP1;ID=exon:NA12877_ch_T0000985:2;Name=ARSFP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	12872863	12873154	.	+	.	source_gene_common_name=RN7SL702P;source_gene=ENSG00000243980.3;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;gene_id=NA12877_ch_G0000327;gene_biotype=misc_RNA;gene_name=RN7SL702P;gene_sources=liftoff;ID=NA12877_ch_G0000327;Name=RN7SL702P
NA12877_chrY	CAT	transcript	12872863	12873154	1000	+	.	source_transcript=ENST00000488394.3;source_transcript_name=RN7SL702P-201;source_gene=ENSG00000243980.3;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000243980.3;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000488394.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000488394.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL702P;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;transcript_id=NA12877_ch_T0000986;gene_id=NA12877_ch_G0000327;Parent=NA12877_ch_G0000327;transcript_name=NA12877_ch_T0000986;gene_name=RN7SL702P;ID=NA12877_ch_T0000986;Name=RN7SL702P
NA12877_chrY	CAT	exon	12872863	12873154	.	+	.	source_transcript=ENST00000488394.3;source_transcript_name=RN7SL702P-201;source_gene=ENSG00000243980.3;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000243980.3;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000488394.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000488394.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL702P;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;transcript_id=NA12877_ch_T0000986;gene_id=NA12877_ch_G0000327;Parent=NA12877_ch_T0000986;transcript_name=NA12877_ch_T0000986;gene_name=RN7SL702P;ID=exon:NA12877_ch_T0000986:0;Name=RN7SL702P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	12921019	12922231	.	+	.	source_gene_common_name=FAM8A4P;source_gene=ENSG00000232730.1;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;gene_id=NA12877_ch_G0000328;gene_biotype=processed_pseudogene;gene_name=FAM8A4P;gene_sources=liftoff;ID=NA12877_ch_G0000328;Name=FAM8A4P
NA12877_chrY	CAT	transcript	12921019	12922231	1000	+	.	source_transcript=ENST00000435433.1;source_transcript_name=FAM8A4P-201;source_gene=ENSG00000232730.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232730.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435433.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM8A4P;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;transcript_id=NA12877_ch_T0000987;gene_id=NA12877_ch_G0000328;Parent=NA12877_ch_G0000328;transcript_name=NA12877_ch_T0000987;gene_name=FAM8A4P;ID=NA12877_ch_T0000987;Name=FAM8A4P
NA12877_chrY	CAT	exon	12921019	12922231	.	+	.	source_transcript=ENST00000435433.1;source_transcript_name=FAM8A4P-201;source_gene=ENSG00000232730.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232730.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435433.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM8A4P;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;transcript_id=NA12877_ch_T0000987;gene_id=NA12877_ch_G0000328;Parent=NA12877_ch_T0000987;transcript_name=NA12877_ch_T0000987;gene_name=FAM8A4P;ID=exon:NA12877_ch_T0000987:0;Name=FAM8A4P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	12927038	12947078	.	+	.	source_gene_common_name=ENSG00000290435;source_gene=ENSG00000290435.2;gene_id=NA12877_ch_G0000329;gene_biotype=lncRNA;gene_name=ENSG00000290435;gene_sources=liftoff;ID=NA12877_ch_G0000329;Name=ENSG00000290435
NA12877_chrY	CAT	transcript	12927038	12946911	1000	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000991;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_G0000329;transcript_name=NA12877_ch_T0000991;gene_name=ENSG00000290435;ID=NA12877_ch_T0000991;Name=ENSG00000290435
NA12877_chrY	CAT	exon	12927038	12927439	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000991;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_T0000991;transcript_name=NA12877_ch_T0000991;gene_name=ENSG00000290435;ID=exon:NA12877_ch_T0000991:0;Name=ENSG00000290435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12927440	12946531	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000991;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_T0000991;transcript_name=NA12877_ch_T0000991;gene_name=ENSG00000290435;ID=intron:NA12877_ch_T0000991:0;Name=ENSG00000290435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12946532	12946911	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000991;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_T0000991;transcript_name=NA12877_ch_T0000991;gene_name=ENSG00000290435;ID=exon:NA12877_ch_T0000991:1;Name=ENSG00000290435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12927325	12939311	1000	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000992;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_G0000329;transcript_name=NA12877_ch_T0000992;gene_name=ENSG00000290435;ID=NA12877_ch_T0000992;Name=ENSG00000290435
NA12877_chrY	CAT	exon	12927325	12927439	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000992;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_T0000992;transcript_name=NA12877_ch_T0000992;gene_name=ENSG00000290435;ID=exon:NA12877_ch_T0000992:0;Name=ENSG00000290435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12927440	12939208	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000992;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_T0000992;transcript_name=NA12877_ch_T0000992;gene_name=ENSG00000290435;ID=intron:NA12877_ch_T0000992:0;Name=ENSG00000290435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12939209	12939311	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000992;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_T0000992;transcript_name=NA12877_ch_T0000992;gene_name=ENSG00000290435;ID=exon:NA12877_ch_T0000992:1;Name=ENSG00000290435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12931469	12947078	1000	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000993;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_G0000329;transcript_name=NA12877_ch_T0000993;gene_name=ENSG00000290435;ID=NA12877_ch_T0000993;Name=ENSG00000290435
NA12877_chrY	CAT	exon	12931469	12931688	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000993;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_T0000993;transcript_name=NA12877_ch_T0000993;gene_name=ENSG00000290435;ID=exon:NA12877_ch_T0000993:0;Name=ENSG00000290435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12931689	12946531	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000993;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_T0000993;transcript_name=NA12877_ch_T0000993;gene_name=ENSG00000290435;ID=intron:NA12877_ch_T0000993:0;Name=ENSG00000290435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12946532	12947078	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000993;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_T0000993;transcript_name=NA12877_ch_T0000993;gene_name=ENSG00000290435;ID=exon:NA12877_ch_T0000993:1;Name=ENSG00000290435;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	12944473	12946891	1000	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000996;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_G0000329;transcript_name=NA12877_ch_T0000996;gene_name=ENSG00000290435;ID=NA12877_ch_T0000996;Name=ENSG00000290435
NA12877_chrY	CAT	exon	12944473	12944611	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000996;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_T0000996;transcript_name=NA12877_ch_T0000996;gene_name=ENSG00000290435;ID=exon:NA12877_ch_T0000996:0;Name=ENSG00000290435;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12944612	12946531	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000996;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_T0000996;transcript_name=NA12877_ch_T0000996;gene_name=ENSG00000290435;ID=intron:NA12877_ch_T0000996:0;Name=ENSG00000290435;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12946532	12946891	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=NA12877_ch_T0000996;gene_id=NA12877_ch_G0000329;Parent=NA12877_ch_T0000996;transcript_name=NA12877_ch_T0000996;gene_name=ENSG00000290435;ID=exon:NA12877_ch_T0000996:1;Name=ENSG00000290435;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	12939209	12946883	.	+	.	source_gene_common_name=ARSLP1;source_gene=ENSG00000224060.4;gene_id=NA12877_ch_G0000330;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ARSLP1;gene_sources=liftoff;ID=NA12877_ch_G0000330;Name=ARSLP1
NA12877_chrY	CAT	transcript	12939209	12946883	1000	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=NA12877_ch_T0000995;gene_id=NA12877_ch_G0000330;Parent=NA12877_ch_G0000330;transcript_name=NA12877_ch_T0000995;gene_name=ARSLP1;ID=NA12877_ch_T0000995;Name=ARSLP1
NA12877_chrY	CAT	exon	12939209	12939371	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=NA12877_ch_T0000995;gene_id=NA12877_ch_G0000330;Parent=NA12877_ch_T0000995;transcript_name=NA12877_ch_T0000995;gene_name=ARSLP1;ID=exon:NA12877_ch_T0000995:0;Name=ARSLP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12939372	12940571	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=NA12877_ch_T0000995;gene_id=NA12877_ch_G0000330;Parent=NA12877_ch_T0000995;transcript_name=NA12877_ch_T0000995;gene_name=ARSLP1;ID=intron:NA12877_ch_T0000995:0;Name=ARSLP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12940572	12940691	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=NA12877_ch_T0000995;gene_id=NA12877_ch_G0000330;Parent=NA12877_ch_T0000995;transcript_name=NA12877_ch_T0000995;gene_name=ARSLP1;ID=exon:NA12877_ch_T0000995:1;Name=ARSLP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12940692	12946531	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=NA12877_ch_T0000995;gene_id=NA12877_ch_G0000330;Parent=NA12877_ch_T0000995;transcript_name=NA12877_ch_T0000995;gene_name=ARSLP1;ID=intron:NA12877_ch_T0000995:1;Name=ARSLP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12946532	12946883	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=NA12877_ch_T0000995;gene_id=NA12877_ch_G0000330;Parent=NA12877_ch_T0000995;transcript_name=NA12877_ch_T0000995;gene_name=ARSLP1;ID=exon:NA12877_ch_T0000995:2;Name=ARSLP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	12953492	12986921	.	+	.	source_gene_common_name=ARSDP1;source_gene=ENSG00000225117.2;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;gene_id=NA12877_ch_G0000331;gene_biotype=unprocessed_pseudogene;gene_name=ARSDP1;gene_sources=liftoff;ID=NA12877_ch_G0000331;Name=ARSDP1
NA12877_chrY	CAT	transcript	12953492	12986921	1000	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_G0000331;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=NA12877_ch_T0000997;Name=ARSDP1
NA12877_chrY	CAT	exon	12953492	12953534	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=exon:NA12877_ch_T0000997:0;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12953535	12961620	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=intron:NA12877_ch_T0000997:0;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12961621	12961770	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=exon:NA12877_ch_T0000997:1;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12961771	12965335	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=intron:NA12877_ch_T0000997:1;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12965336	12965457	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=exon:NA12877_ch_T0000997:2;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12965458	12966592	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=intron:NA12877_ch_T0000997:2;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12966593	12966714	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=exon:NA12877_ch_T0000997:3;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12966715	12973258	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=intron:NA12877_ch_T0000997:3;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12973259	12973673	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=exon:NA12877_ch_T0000997:4;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12973674	12977278	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=intron:NA12877_ch_T0000997:4;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12977279	12977415	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=exon:NA12877_ch_T0000997:5;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12977416	12981928	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=intron:NA12877_ch_T0000997:5;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12981929	12982062	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=exon:NA12877_ch_T0000997:6;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12982063	12982733	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=intron:NA12877_ch_T0000997:6;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12982734	12982896	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=exon:NA12877_ch_T0000997:7;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12982897	12983901	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=intron:NA12877_ch_T0000997:7;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12983902	12984023	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=exon:NA12877_ch_T0000997:8;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	12984024	12986562	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=intron:NA12877_ch_T0000997:8;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	12986563	12986921	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=NA12877_ch_T0000997;gene_id=NA12877_ch_G0000331;Parent=NA12877_ch_T0000997;transcript_name=NA12877_ch_T0000997;gene_name=ARSDP1;ID=exon:NA12877_ch_T0000997:9;Name=ARSDP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13006385	13019911	.	-	.	source_gene_common_name=GYG2P1;source_gene=ENSG00000206159.14;gene_id=NA12877_ch_G0000332;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=NA12877_ch_G0000332;Name=GYG2P1
NA12877_chrY	CAT	transcript	13006385	13019911	1000	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=NA12877_ch_T0001016;gene_id=NA12877_ch_G0000332;Parent=NA12877_ch_G0000332;transcript_name=NA12877_ch_T0001016;gene_name=GYG2P1;ID=NA12877_ch_T0001016;Name=GYG2P1
NA12877_chrY	CAT	exon	13006385	13006526	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=NA12877_ch_T0001016;gene_id=NA12877_ch_G0000332;Parent=NA12877_ch_T0001016;transcript_name=NA12877_ch_T0001016;gene_name=GYG2P1;ID=exon:NA12877_ch_T0001016:0;Name=GYG2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13006527	13019904	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=NA12877_ch_T0001016;gene_id=NA12877_ch_G0000332;Parent=NA12877_ch_T0001016;transcript_name=NA12877_ch_T0001016;gene_name=GYG2P1;ID=intron:NA12877_ch_T0001016:0;Name=GYG2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13019905	13019911	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=NA12877_ch_T0001016;gene_id=NA12877_ch_G0000332;Parent=NA12877_ch_T0001016;transcript_name=NA12877_ch_T0001016;gene_name=GYG2P1;ID=exon:NA12877_ch_T0001016:1;Name=GYG2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13039635	13106966	.	-	.	source_gene_common_name=XGY1;source_gene=ENSG00000227447.1;gene_id=NA12877_ch_G0000333;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XGY1;gene_sources=liftoff;ID=NA12877_ch_G0000333;Name=XGY1
NA12877_chrY	CAT	transcript	13039635	13106966	1000	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_G0000333;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=NA12877_ch_T0001018;Name=XGY1
NA12877_chrY	CAT	exon	13039635	13039751	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=exon:NA12877_ch_T0001018:0;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13039752	13042853	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=intron:NA12877_ch_T0001018:0;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13042854	13042889	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=exon:NA12877_ch_T0001018:1;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13042890	13055733	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=intron:NA12877_ch_T0001018:1;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13055734	13055784	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=exon:NA12877_ch_T0001018:2;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13055785	13059290	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=intron:NA12877_ch_T0001018:2;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13059291	13059348	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=exon:NA12877_ch_T0001018:3;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13059349	13068031	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=intron:NA12877_ch_T0001018:3;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13068032	13068094	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=exon:NA12877_ch_T0001018:4;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13068095	13084319	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=intron:NA12877_ch_T0001018:4;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13084320	13084343	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=exon:NA12877_ch_T0001018:5;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13084344	13088022	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=intron:NA12877_ch_T0001018:5;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13088023	13088058	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=exon:NA12877_ch_T0001018:6;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13088059	13106905	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=intron:NA12877_ch_T0001018:6;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13106906	13106966	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=NA12877_ch_T0001018;gene_id=NA12877_ch_G0000333;Parent=NA12877_ch_T0001018;transcript_name=NA12877_ch_T0001018;gene_name=XGY1;ID=exon:NA12877_ch_T0001018:7;Name=XGY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13078382	13107313	.	-	.	source_gene_common_name=ENSG00000296286;source_gene=ENSG00000296286.1;gene_id=NA12877_ch_G0000334;gene_biotype=lncRNA;gene_name=ENSG00000296286;gene_sources=liftoff;ID=NA12877_ch_G0000334;Name=ENSG00000296286
NA12877_chrY	CAT	transcript	13078382	13107313	1000	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=NA12877_ch_T0001019;gene_id=NA12877_ch_G0000334;Parent=NA12877_ch_G0000334;transcript_name=NA12877_ch_T0001019;gene_name=ENSG00000296286;ID=NA12877_ch_T0001019;Name=ENSG00000296286
NA12877_chrY	CAT	exon	13078382	13078877	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=NA12877_ch_T0001019;gene_id=NA12877_ch_G0000334;Parent=NA12877_ch_T0001019;transcript_name=NA12877_ch_T0001019;gene_name=ENSG00000296286;ID=exon:NA12877_ch_T0001019:0;Name=ENSG00000296286;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13078878	13084319	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=NA12877_ch_T0001019;gene_id=NA12877_ch_G0000334;Parent=NA12877_ch_T0001019;transcript_name=NA12877_ch_T0001019;gene_name=ENSG00000296286;ID=intron:NA12877_ch_T0001019:0;Name=ENSG00000296286;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13084320	13084343	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=NA12877_ch_T0001019;gene_id=NA12877_ch_G0000334;Parent=NA12877_ch_T0001019;transcript_name=NA12877_ch_T0001019;gene_name=ENSG00000296286;ID=exon:NA12877_ch_T0001019:1;Name=ENSG00000296286;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13084344	13106905	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=NA12877_ch_T0001019;gene_id=NA12877_ch_G0000334;Parent=NA12877_ch_T0001019;transcript_name=NA12877_ch_T0001019;gene_name=ENSG00000296286;ID=intron:NA12877_ch_T0001019:1;Name=ENSG00000296286;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13106906	13107313	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=NA12877_ch_T0001019;gene_id=NA12877_ch_G0000334;Parent=NA12877_ch_T0001019;transcript_name=NA12877_ch_T0001019;gene_name=ENSG00000296286;ID=exon:NA12877_ch_T0001019:2;Name=ENSG00000296286;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13137447	13460632	.	+	.	source_gene_common_name=USP9Y;source_gene=ENSG00000114374.13;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;gene_id=NA12877_ch_G0000335;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff;ID=NA12877_ch_G0000335;Name=USP9Y
NA12877_chrY	CAT	transcript	13137447	13308660	1000	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_G0000335;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=NA12877_ch_T0001020;Name=USP9Y
NA12877_chrY	CAT	exon	13137447	13137804	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=exon:NA12877_ch_T0001020:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13137805	13144580	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=intron:NA12877_ch_T0001020:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13144581	13144735	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=exon:NA12877_ch_T0001020:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13144736	13145907	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=intron:NA12877_ch_T0001020:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13145908	13146047	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=exon:NA12877_ch_T0001020:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13146048	13262143	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=intron:NA12877_ch_T0001020:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13262144	13262494	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=exon:NA12877_ch_T0001020:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13262495	13264427	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=intron:NA12877_ch_T0001020:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13264428	13264474	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=exon:NA12877_ch_T0001020:4;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13264475	13286303	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=intron:NA12877_ch_T0001020:4;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13286304	13286397	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=exon:NA12877_ch_T0001020:5;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13286398	13290116	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=intron:NA12877_ch_T0001020:5;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13290117	13290232	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=exon:NA12877_ch_T0001020:6;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13290233	13301800	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=intron:NA12877_ch_T0001020:6;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13301801	13301846	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=exon:NA12877_ch_T0001020:7;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13301847	13307550	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=intron:NA12877_ch_T0001020:7;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13307551	13308660	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=NA12877_ch_T0001020;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001020;transcript_name=NA12877_ch_T0001020;gene_name=USP9Y;ID=exon:NA12877_ch_T0001020:8;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13262122	13292024	1000	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=NA12877_ch_T0001028;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_G0000335;transcript_name=NA12877_ch_T0001028;gene_name=USP9Y;ID=NA12877_ch_T0001028;Name=USP9Y
NA12877_chrY	CAT	exon	13262122	13262494	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=NA12877_ch_T0001028;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001028;transcript_name=NA12877_ch_T0001028;gene_name=USP9Y;ID=exon:NA12877_ch_T0001028:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13262495	13264427	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=NA12877_ch_T0001028;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001028;transcript_name=NA12877_ch_T0001028;gene_name=USP9Y;ID=intron:NA12877_ch_T0001028:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13264428	13264474	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=NA12877_ch_T0001028;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001028;transcript_name=NA12877_ch_T0001028;gene_name=USP9Y;ID=exon:NA12877_ch_T0001028:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13264475	13286303	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=NA12877_ch_T0001028;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001028;transcript_name=NA12877_ch_T0001028;gene_name=USP9Y;ID=intron:NA12877_ch_T0001028:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13286304	13286397	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=NA12877_ch_T0001028;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001028;transcript_name=NA12877_ch_T0001028;gene_name=USP9Y;ID=exon:NA12877_ch_T0001028:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13286398	13287254	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=NA12877_ch_T0001028;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001028;transcript_name=NA12877_ch_T0001028;gene_name=USP9Y;ID=intron:NA12877_ch_T0001028:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13287255	13292024	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=NA12877_ch_T0001028;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001028;transcript_name=NA12877_ch_T0001028;gene_name=USP9Y;ID=exon:NA12877_ch_T0001028:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13262156	13460595	100	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_G0000335;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=NA12877_ch_T0001029;Name=USP9Y
NA12877_chrY	CAT	exon	13262156	13262494	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13262495	13264427	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13264428	13264474	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13264475	13286303	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13286304	13286397	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13286398	13301800	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13301801	13301846	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13301847	13309178	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13309179	13309334	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:4;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13309239	13309334	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	13309239	13309241	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=start_codon:NA12877_ch_T0001029;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13309335	13320379	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:4;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13320380	13320528	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:5;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13320380	13320528	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13320529	13321898	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:5;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13321899	13321978	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:6;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13321899	13321978	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13321979	13324903	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:6;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13324904	13325016	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:7;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13324904	13325016	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13325017	13326365	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:7;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13326366	13326584	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:8;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13326366	13326584	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:4;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13326585	13335402	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:8;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13335403	13335518	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:9;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13335403	13335518	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:5;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13335519	13335788	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:9;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13335789	13336040	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:10;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13335789	13336040	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:6;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13336041	13336201	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:10;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13336202	13336340	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:11;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13336202	13336340	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:7;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13336341	13337947	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:11;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13337948	13338100	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:12;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13337948	13338100	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:8;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13338101	13339315	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:12;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13339316	13339420	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:13;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13339316	13339420	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:9;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13339421	13356982	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:13;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13356983	13357189	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:14;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13356983	13357189	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:10;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13357190	13358296	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:14;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13358297	13358433	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:15;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13358297	13358433	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:11;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13358434	13360274	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:15;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13360275	13360408	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:16;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13360275	13360408	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:12;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13360409	13370858	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:16;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13370859	13370946	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:17;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13370859	13370946	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:13;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13370947	13373373	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:17;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13373374	13373716	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:18;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13373374	13373716	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:14;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13373717	13375261	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:18;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13375262	13375357	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:19;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13375262	13375357	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:15;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13375358	13376439	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:19;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13376440	13376651	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:20;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13376440	13376651	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:16;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13376652	13377809	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:20;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13377810	13378050	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:21;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13377810	13378050	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:17;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13378051	13378396	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:21;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13378397	13378546	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:22;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13378397	13378546	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:18;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13378547	13379316	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:22;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13379317	13379437	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:23;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13379317	13379437	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:19;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13379438	13385993	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:23;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13385994	13386124	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:24;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13385994	13386124	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:20;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13386125	13386312	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:24;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13386313	13386591	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:25;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13386313	13386591	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:21;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13386592	13390197	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:25;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13390198	13390323	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:26;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13390198	13390323	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:22;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13390324	13391289	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:26;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13391290	13391415	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:27;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13391290	13391415	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:23;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13391416	13392822	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:27;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13392823	13392992	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:28;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13392823	13392992	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:24;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13392993	13409970	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:28;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13409971	13410079	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:29;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13409971	13410079	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:25;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13410080	13410463	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:29;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13410464	13410610	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:30;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13410464	13410610	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:26;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13410611	13411426	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:30;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13411427	13411573	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:31;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13411427	13411573	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:27;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13411574	13412621	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:31;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13412622	13412844	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:32;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13412622	13412844	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:28;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13412845	13415915	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:32;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13415916	13416136	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:33;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13415916	13416136	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:29;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13416137	13418211	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:33;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13418212	13418402	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:34;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13418212	13418402	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:30;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13418403	13433480	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:34;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13433481	13433654	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:35;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13433481	13433654	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:31;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13433655	13437703	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:35;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13437704	13437845	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:36;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13437704	13437845	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:32;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13437846	13439656	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:36;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13439657	13440407	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:37;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13439657	13440407	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:33;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13440408	13440802	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:37;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13440803	13440926	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:38;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13440803	13440926	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:34;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13440927	13442032	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:38;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13442033	13442258	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:39;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13442033	13442258	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:35;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13442259	13442856	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:39;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13442857	13442986	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:40;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13442857	13442986	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:36;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13442987	13446125	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:40;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13446126	13446311	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:41;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13446126	13446311	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:37;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13446312	13446725	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:41;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13446726	13446946	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:42;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13446726	13446946	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:38;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13446947	13447031	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:42;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13447032	13447120	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:43;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13447032	13447120	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:39;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13447121	13456132	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:43;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13456133	13456289	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:44;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13456133	13456289	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:40;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13456290	13456425	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:44;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13456426	13456638	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:45;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13456426	13456638	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:41;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13456639	13457358	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:45;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13457359	13457454	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:46;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13457359	13457454	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:42;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13457455	13459071	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=intron:NA12877_ch_T0001029:46;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13459072	13460595	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=exon:NA12877_ch_T0001029:47;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13459072	13459209	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001029:43;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13459207	13459209	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=NA12877_ch_T0001029;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001029;transcript_name=NA12877_ch_T0001029;gene_name=USP9Y;ID=stop_codon:NA12877_ch_T0001029;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13262325	13288046	1000	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=NA12877_ch_T0001030;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_G0000335;transcript_name=NA12877_ch_T0001030;gene_name=USP9Y;ID=NA12877_ch_T0001030;Name=USP9Y
NA12877_chrY	CAT	exon	13262325	13262494	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=NA12877_ch_T0001030;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001030;transcript_name=NA12877_ch_T0001030;gene_name=USP9Y;ID=exon:NA12877_ch_T0001030:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13262495	13264427	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=NA12877_ch_T0001030;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001030;transcript_name=NA12877_ch_T0001030;gene_name=USP9Y;ID=intron:NA12877_ch_T0001030:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13264428	13264474	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=NA12877_ch_T0001030;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001030;transcript_name=NA12877_ch_T0001030;gene_name=USP9Y;ID=exon:NA12877_ch_T0001030:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13264475	13286303	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=NA12877_ch_T0001030;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001030;transcript_name=NA12877_ch_T0001030;gene_name=USP9Y;ID=intron:NA12877_ch_T0001030:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13286304	13286397	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=NA12877_ch_T0001030;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001030;transcript_name=NA12877_ch_T0001030;gene_name=USP9Y;ID=exon:NA12877_ch_T0001030:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13286398	13287475	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=NA12877_ch_T0001030;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001030;transcript_name=NA12877_ch_T0001030;gene_name=USP9Y;ID=intron:NA12877_ch_T0001030:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13287476	13288046	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=NA12877_ch_T0001030;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001030;transcript_name=NA12877_ch_T0001030;gene_name=USP9Y;ID=exon:NA12877_ch_T0001030:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13301022	13460632	100	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_G0000335;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=NA12877_ch_T0001031;Name=USP9Y
NA12877_chrY	CAT	exon	13301022	13301846	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13301847	13308424	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13308425	13308484	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13308485	13309178	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13309179	13309334	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13309239	13309334	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	13309239	13309241	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=start_codon:NA12877_ch_T0001031;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13309335	13320379	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13320380	13320528	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13320380	13320528	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13320529	13321898	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13321899	13321978	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:4;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13321899	13321978	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13321979	13324903	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:4;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13324904	13325016	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:5;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13324904	13325016	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13325017	13326365	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:5;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13326366	13326584	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:6;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13326366	13326584	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:4;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13326585	13335402	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:6;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13335403	13335518	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:7;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13335403	13335518	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:5;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13335519	13335788	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:7;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13335789	13336040	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:8;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13335789	13336040	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:6;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13336041	13336201	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:8;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13336202	13336340	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:9;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13336202	13336340	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:7;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13336341	13337947	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:9;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13337948	13338100	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:10;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13337948	13338100	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:8;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13338101	13339315	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:10;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13339316	13339420	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:11;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13339316	13339420	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:9;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13339421	13356982	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:11;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13356983	13357189	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:12;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13356983	13357189	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:10;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13357190	13358296	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:12;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13358297	13358433	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:13;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13358297	13358433	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:11;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13358434	13360274	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:13;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13360275	13360408	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:14;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13360275	13360408	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:12;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13360409	13370858	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:14;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13370859	13370946	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:15;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13370859	13370946	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:13;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13370947	13373373	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:15;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13373374	13373716	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:16;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13373374	13373716	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:14;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13373717	13375261	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:16;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13375262	13375357	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:17;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13375262	13375357	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:15;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13375358	13376439	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:17;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13376440	13376651	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:18;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13376440	13376651	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:16;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13376652	13377809	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:18;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13377810	13378050	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:19;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13377810	13378050	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:17;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13378051	13378396	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:19;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13378397	13378546	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:20;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13378397	13378546	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:18;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13378547	13379316	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:20;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13379317	13379437	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:21;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13379317	13379437	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:19;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13379438	13385993	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:21;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13385994	13386124	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:22;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13385994	13386124	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:20;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13386125	13386312	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:22;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13386313	13386591	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:23;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13386313	13386591	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:21;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13386592	13390197	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:23;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13390198	13390323	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:24;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13390198	13390323	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:22;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13390324	13391289	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:24;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13391290	13391415	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:25;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13391290	13391415	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:23;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13391416	13392822	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:25;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13392823	13392992	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:26;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13392823	13392992	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:24;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13392993	13409970	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:26;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13409971	13410079	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:27;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13409971	13410079	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:25;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13410080	13410463	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:27;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13410464	13410610	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:28;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13410464	13410610	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:26;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13410611	13411426	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:28;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13411427	13411573	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:29;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13411427	13411573	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:27;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13411574	13412621	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:29;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13412622	13412844	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:30;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13412622	13412844	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:28;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13412845	13415915	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:30;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13415916	13416136	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:31;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13415916	13416136	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:29;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13416137	13418211	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:31;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13418212	13418402	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:32;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13418212	13418402	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:30;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13418403	13433480	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:32;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13433481	13433654	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:33;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13433481	13433654	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:31;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13433655	13437703	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:33;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13437704	13437845	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:34;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13437704	13437845	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:32;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13437846	13439656	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:34;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13439657	13440407	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:35;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13439657	13440407	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:33;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13440408	13440802	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:35;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13440803	13440926	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:36;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13440803	13440926	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:34;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13440927	13442032	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:36;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13442033	13442258	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:37;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13442033	13442258	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:35;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13442259	13442856	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:37;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13442857	13442986	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:38;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13442857	13442986	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:36;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13442987	13446125	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:38;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13446126	13446311	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:39;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13446126	13446311	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:37;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13446312	13446725	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:39;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13446726	13446946	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:40;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13446726	13446946	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:38;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13446947	13447031	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:40;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13447032	13447120	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:41;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13447032	13447120	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:39;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13447121	13456132	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:41;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13456133	13456289	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:42;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13456133	13456289	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:40;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13456290	13456425	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:42;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13456426	13456638	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:43;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13456426	13456638	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:41;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13456639	13457358	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:43;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13457359	13457454	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:44;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13457359	13457454	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:42;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13457455	13459071	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=intron:NA12877_ch_T0001031:44;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13459072	13460632	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=exon:NA12877_ch_T0001031:45;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13459072	13459209	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001031:43;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13459207	13459209	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=NA12877_ch_T0001031;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001031;transcript_name=NA12877_ch_T0001031;gene_name=USP9Y;ID=stop_codon:NA12877_ch_T0001031;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13301831	13320994	1000	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=NA12877_ch_T0001032;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_G0000335;transcript_name=NA12877_ch_T0001032;gene_name=USP9Y;ID=NA12877_ch_T0001032;Name=USP9Y
NA12877_chrY	CAT	exon	13301831	13301846	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=NA12877_ch_T0001032;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001032;transcript_name=NA12877_ch_T0001032;gene_name=USP9Y;ID=exon:NA12877_ch_T0001032:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13301847	13309178	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=NA12877_ch_T0001032;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001032;transcript_name=NA12877_ch_T0001032;gene_name=USP9Y;ID=intron:NA12877_ch_T0001032:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13309179	13309334	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=NA12877_ch_T0001032;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001032;transcript_name=NA12877_ch_T0001032;gene_name=USP9Y;ID=exon:NA12877_ch_T0001032:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13309335	13320379	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=NA12877_ch_T0001032;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001032;transcript_name=NA12877_ch_T0001032;gene_name=USP9Y;ID=intron:NA12877_ch_T0001032:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13320380	13320994	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=NA12877_ch_T0001032;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001032;transcript_name=NA12877_ch_T0001032;gene_name=USP9Y;ID=exon:NA12877_ch_T0001032:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13309227	13460632	1000	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_G0000335;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=NA12877_ch_T0001033;Name=USP9Y
NA12877_chrY	CAT	exon	13309227	13309334	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13309335	13320379	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13320380	13320528	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13320529	13321898	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13321899	13321978	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13321979	13324903	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13324904	13325016	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13325017	13326365	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13326366	13326584	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:4;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13326585	13335402	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:4;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13335403	13335518	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:5;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13335519	13335788	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:5;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13335789	13336040	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:6;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13336041	13336201	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:6;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13336202	13336340	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:7;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13336341	13337947	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:7;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13337948	13338100	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:8;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13338101	13339315	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:8;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13339316	13339420	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:9;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13339421	13356982	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:9;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13356983	13357189	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:10;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13357190	13358296	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:10;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13358297	13358433	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:11;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13358434	13360274	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:11;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13360275	13360408	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:12;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13360409	13370858	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:12;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13370859	13370946	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:13;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13370947	13373373	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:13;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13373374	13373716	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:14;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13373717	13375261	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:14;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13375262	13375357	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:15;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13375358	13376439	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:15;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13376440	13376651	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:16;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13376652	13377809	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:16;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13377810	13378050	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:17;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13378051	13378396	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:17;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13378397	13378546	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:18;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13378547	13379316	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:18;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13379317	13379437	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:19;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13379438	13385993	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:19;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13385994	13386124	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:20;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13386125	13386312	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:20;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13386313	13386591	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:21;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13386592	13390197	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:21;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13390198	13390323	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:22;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13390324	13391289	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:22;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13391290	13391415	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:23;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13391416	13392822	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:23;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13392823	13392992	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:24;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13392993	13409970	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:24;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13409971	13410079	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:25;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13410080	13410463	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:25;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13410464	13410610	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:26;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13410611	13411426	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:26;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13411427	13411573	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:27;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13411574	13412621	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:27;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13412622	13412844	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:28;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13412845	13415915	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:28;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13415916	13416136	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:29;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13416137	13418211	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:29;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13418212	13418402	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:30;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13418403	13433480	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:30;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13433481	13433654	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:31;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13433655	13437703	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:31;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13437704	13437845	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:32;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13437846	13439656	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:32;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13439657	13440407	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:33;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13440408	13440802	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:33;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13440803	13440926	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:34;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13440927	13442017	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:34;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13442018	13442258	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:35;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13442259	13442856	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:35;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13442857	13442986	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:36;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13442987	13446125	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:36;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13446126	13446311	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:37;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13446312	13446725	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:37;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13446726	13446946	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:38;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13446947	13447031	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:38;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13447032	13447120	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:39;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13447121	13456132	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:39;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13456133	13456289	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:40;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13456290	13456425	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:40;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13456426	13456638	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:41;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13456639	13457358	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:41;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13457359	13457454	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:42;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13457455	13459071	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=intron:NA12877_ch_T0001033:42;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13459072	13460632	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=299.989;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=NA12877_ch_T0001033;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001033;transcript_name=NA12877_ch_T0001033;gene_name=USP9Y;ID=exon:NA12877_ch_T0001033:43;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13446838	13459405	100	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_G0000335;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=NA12877_ch_T0001035;Name=USP9Y
NA12877_chrY	CAT	exon	13446838	13446946	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=exon:NA12877_ch_T0001035:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13446838	13446946	.	+	2	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001035:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13446947	13456132	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=intron:NA12877_ch_T0001035:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13456133	13456289	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=exon:NA12877_ch_T0001035:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13456133	13456289	.	+	1	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001035:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13456290	13456425	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=intron:NA12877_ch_T0001035:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13456426	13456638	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=exon:NA12877_ch_T0001035:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13456426	13456638	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001035:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13456639	13457358	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=intron:NA12877_ch_T0001035:2;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13457359	13457454	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=exon:NA12877_ch_T0001035:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13457359	13457454	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001035:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13457455	13459071	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=intron:NA12877_ch_T0001035:3;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13459072	13459405	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=exon:NA12877_ch_T0001035:4;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13459072	13459209	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=CDS:NA12877_ch_T0001035:4;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13459207	13459209	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=NA12877_ch_T0001035;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001035;transcript_name=NA12877_ch_T0001035;gene_name=USP9Y;ID=stop_codon:NA12877_ch_T0001035;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13456606	13460632	1000	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=NA12877_ch_T0001036;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_G0000335;transcript_name=NA12877_ch_T0001036;gene_name=USP9Y;ID=NA12877_ch_T0001036;Name=USP9Y
NA12877_chrY	CAT	exon	13456606	13457454	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=NA12877_ch_T0001036;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001036;transcript_name=NA12877_ch_T0001036;gene_name=USP9Y;ID=exon:NA12877_ch_T0001036:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13457455	13459071	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=NA12877_ch_T0001036;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001036;transcript_name=NA12877_ch_T0001036;gene_name=USP9Y;ID=intron:NA12877_ch_T0001036:0;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13459072	13460632	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=NA12877_ch_T0001036;gene_id=NA12877_ch_G0000335;Parent=NA12877_ch_T0001036;transcript_name=NA12877_ch_T0001036;gene_name=USP9Y;ID=exon:NA12877_ch_T0001036:1;Name=USP9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13137570	13144680	.	+	.	source_gene_common_name=SHROOM2P1;source_gene=ENSG00000226863.1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;gene_id=NA12877_ch_G0000336;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=SHROOM2P1;gene_sources=liftoff;ID=NA12877_ch_G0000336;Name=SHROOM2P1
NA12877_chrY	CAT	transcript	13137570	13144680	1000	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=NA12877_ch_T0001021;gene_id=NA12877_ch_G0000336;Parent=NA12877_ch_G0000336;transcript_name=NA12877_ch_T0001021;gene_name=SHROOM2P1;ID=NA12877_ch_T0001021;Name=SHROOM2P1
NA12877_chrY	CAT	exon	13137570	13137698	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=NA12877_ch_T0001021;gene_id=NA12877_ch_G0000336;Parent=NA12877_ch_T0001021;transcript_name=NA12877_ch_T0001021;gene_name=SHROOM2P1;ID=exon:NA12877_ch_T0001021:0;Name=SHROOM2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13137699	13140856	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=NA12877_ch_T0001021;gene_id=NA12877_ch_G0000336;Parent=NA12877_ch_T0001021;transcript_name=NA12877_ch_T0001021;gene_name=SHROOM2P1;ID=intron:NA12877_ch_T0001021:0;Name=SHROOM2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13140857	13143011	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=NA12877_ch_T0001021;gene_id=NA12877_ch_G0000336;Parent=NA12877_ch_T0001021;transcript_name=NA12877_ch_T0001021;gene_name=SHROOM2P1;ID=exon:NA12877_ch_T0001021:1;Name=SHROOM2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13143012	13144580	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=NA12877_ch_T0001021;gene_id=NA12877_ch_G0000336;Parent=NA12877_ch_T0001021;transcript_name=NA12877_ch_T0001021;gene_name=SHROOM2P1;ID=intron:NA12877_ch_T0001021:1;Name=SHROOM2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13144581	13144680	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=NA12877_ch_T0001021;gene_id=NA12877_ch_G0000336;Parent=NA12877_ch_T0001021;transcript_name=NA12877_ch_T0001021;gene_name=SHROOM2P1;ID=exon:NA12877_ch_T0001021:2;Name=SHROOM2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13218772	13234190	.	-	.	source_gene_common_name=MED14P1;source_gene=ENSG00000233774.1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;gene_id=NA12877_ch_G0000337;gene_biotype=unprocessed_pseudogene;gene_name=MED14P1;gene_sources=liftoff;ID=NA12877_ch_G0000337;Name=MED14P1
NA12877_chrY	CAT	transcript	13218772	13234190	1000	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=NA12877_ch_T0001022;gene_id=NA12877_ch_G0000337;Parent=NA12877_ch_G0000337;transcript_name=NA12877_ch_T0001022;gene_name=MED14P1;ID=NA12877_ch_T0001022;Name=MED14P1
NA12877_chrY	CAT	exon	13218772	13218912	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=NA12877_ch_T0001022;gene_id=NA12877_ch_G0000337;Parent=NA12877_ch_T0001022;transcript_name=NA12877_ch_T0001022;gene_name=MED14P1;ID=exon:NA12877_ch_T0001022:0;Name=MED14P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13218913	13219414	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=NA12877_ch_T0001022;gene_id=NA12877_ch_G0000337;Parent=NA12877_ch_T0001022;transcript_name=NA12877_ch_T0001022;gene_name=MED14P1;ID=intron:NA12877_ch_T0001022:0;Name=MED14P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13219415	13219522	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=NA12877_ch_T0001022;gene_id=NA12877_ch_G0000337;Parent=NA12877_ch_T0001022;transcript_name=NA12877_ch_T0001022;gene_name=MED14P1;ID=exon:NA12877_ch_T0001022:1;Name=MED14P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13219523	13219818	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=NA12877_ch_T0001022;gene_id=NA12877_ch_G0000337;Parent=NA12877_ch_T0001022;transcript_name=NA12877_ch_T0001022;gene_name=MED14P1;ID=intron:NA12877_ch_T0001022:1;Name=MED14P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13219819	13219954	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=NA12877_ch_T0001022;gene_id=NA12877_ch_G0000337;Parent=NA12877_ch_T0001022;transcript_name=NA12877_ch_T0001022;gene_name=MED14P1;ID=exon:NA12877_ch_T0001022:2;Name=MED14P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13219955	13232517	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=NA12877_ch_T0001022;gene_id=NA12877_ch_G0000337;Parent=NA12877_ch_T0001022;transcript_name=NA12877_ch_T0001022;gene_name=MED14P1;ID=intron:NA12877_ch_T0001022:2;Name=MED14P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13232518	13232662	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=NA12877_ch_T0001022;gene_id=NA12877_ch_G0000337;Parent=NA12877_ch_T0001022;transcript_name=NA12877_ch_T0001022;gene_name=MED14P1;ID=exon:NA12877_ch_T0001022:3;Name=MED14P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13232663	13234072	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=NA12877_ch_T0001022;gene_id=NA12877_ch_G0000337;Parent=NA12877_ch_T0001022;transcript_name=NA12877_ch_T0001022;gene_name=MED14P1;ID=intron:NA12877_ch_T0001022:3;Name=MED14P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13234073	13234190	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=NA12877_ch_T0001022;gene_id=NA12877_ch_G0000337;Parent=NA12877_ch_T0001022;transcript_name=NA12877_ch_T0001022;gene_name=MED14P1;ID=exon:NA12877_ch_T0001022:4;Name=MED14P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13261097	13263328	.	-	.	source_gene_common_name=ENSG00000286009;source_gene=ENSG00000286009.3;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;gene_id=NA12877_ch_G0000338;gene_biotype=lncRNA;gene_name=ENSG00000286009;gene_sources=liftoff;ID=NA12877_ch_G0000338;Name=ENSG00000286009
NA12877_chrY	CAT	transcript	13261097	13263323	1000	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=NA12877_ch_T0001023;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_G0000338;transcript_name=NA12877_ch_T0001023;gene_name=ENSG00000286009;ID=NA12877_ch_T0001023;Name=ENSG00000286009
NA12877_chrY	CAT	exon	13261097	13261909	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=NA12877_ch_T0001023;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001023;transcript_name=NA12877_ch_T0001023;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001023:0;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13261910	13262313	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=NA12877_ch_T0001023;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001023;transcript_name=NA12877_ch_T0001023;gene_name=ENSG00000286009;ID=intron:NA12877_ch_T0001023:0;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13262314	13262539	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=NA12877_ch_T0001023;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001023;transcript_name=NA12877_ch_T0001023;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001023:1;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13262540	13263148	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=NA12877_ch_T0001023;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001023;transcript_name=NA12877_ch_T0001023;gene_name=ENSG00000286009;ID=intron:NA12877_ch_T0001023:1;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13263149	13263323	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=NA12877_ch_T0001023;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001023;transcript_name=NA12877_ch_T0001023;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001023:2;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13261100	13263294	1000	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=NA12877_ch_T0001024;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_G0000338;transcript_name=NA12877_ch_T0001024;gene_name=ENSG00000286009;ID=NA12877_ch_T0001024;Name=ENSG00000286009
NA12877_chrY	CAT	exon	13261100	13261912	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=NA12877_ch_T0001024;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001024;transcript_name=NA12877_ch_T0001024;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001024:0;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13261913	13262313	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=NA12877_ch_T0001024;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001024;transcript_name=NA12877_ch_T0001024;gene_name=ENSG00000286009;ID=intron:NA12877_ch_T0001024:0;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13262314	13262539	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=NA12877_ch_T0001024;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001024;transcript_name=NA12877_ch_T0001024;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001024:1;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13262540	13263091	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=NA12877_ch_T0001024;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001024;transcript_name=NA12877_ch_T0001024;gene_name=ENSG00000286009;ID=intron:NA12877_ch_T0001024:1;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13263092	13263294	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=NA12877_ch_T0001024;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001024;transcript_name=NA12877_ch_T0001024;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001024:2;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13261103	13263262	1000	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=NA12877_ch_T0001025;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_G0000338;transcript_name=NA12877_ch_T0001025;gene_name=ENSG00000286009;ID=NA12877_ch_T0001025;Name=ENSG00000286009
NA12877_chrY	CAT	exon	13261103	13261912	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=NA12877_ch_T0001025;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001025;transcript_name=NA12877_ch_T0001025;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001025:0;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13261913	13262444	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=NA12877_ch_T0001025;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001025;transcript_name=NA12877_ch_T0001025;gene_name=ENSG00000286009;ID=intron:NA12877_ch_T0001025:0;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13262445	13262539	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=NA12877_ch_T0001025;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001025;transcript_name=NA12877_ch_T0001025;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001025:1;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13262540	13263091	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=NA12877_ch_T0001025;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001025;transcript_name=NA12877_ch_T0001025;gene_name=ENSG00000286009;ID=intron:NA12877_ch_T0001025:1;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13263092	13263262	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=NA12877_ch_T0001025;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001025;transcript_name=NA12877_ch_T0001025;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001025:2;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13261103	13263266	1000	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=NA12877_ch_T0001026;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_G0000338;transcript_name=NA12877_ch_T0001026;gene_name=ENSG00000286009;ID=NA12877_ch_T0001026;Name=ENSG00000286009
NA12877_chrY	CAT	exon	13261103	13261912	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=NA12877_ch_T0001026;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001026;transcript_name=NA12877_ch_T0001026;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001026:0;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13261913	13262444	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=NA12877_ch_T0001026;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001026;transcript_name=NA12877_ch_T0001026;gene_name=ENSG00000286009;ID=intron:NA12877_ch_T0001026:0;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13262445	13262539	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=NA12877_ch_T0001026;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001026;transcript_name=NA12877_ch_T0001026;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001026:1;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13262540	13263148	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=NA12877_ch_T0001026;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001026;transcript_name=NA12877_ch_T0001026;gene_name=ENSG00000286009;ID=intron:NA12877_ch_T0001026:1;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13263149	13263266	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=NA12877_ch_T0001026;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001026;transcript_name=NA12877_ch_T0001026;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001026:2;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13261103	13263328	1000	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=NA12877_ch_T0001027;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_G0000338;transcript_name=NA12877_ch_T0001027;gene_name=ENSG00000286009;ID=NA12877_ch_T0001027;Name=ENSG00000286009
NA12877_chrY	CAT	exon	13261103	13261912	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=NA12877_ch_T0001027;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001027;transcript_name=NA12877_ch_T0001027;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001027:0;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13261913	13262313	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=NA12877_ch_T0001027;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001027;transcript_name=NA12877_ch_T0001027;gene_name=ENSG00000286009;ID=intron:NA12877_ch_T0001027:0;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13262314	13262539	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=NA12877_ch_T0001027;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001027;transcript_name=NA12877_ch_T0001027;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001027:1;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13262540	13263148	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=NA12877_ch_T0001027;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001027;transcript_name=NA12877_ch_T0001027;gene_name=ENSG00000286009;ID=intron:NA12877_ch_T0001027:1;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13263149	13263328	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=NA12877_ch_T0001027;gene_id=NA12877_ch_G0000338;Parent=NA12877_ch_T0001027;transcript_name=NA12877_ch_T0001027;gene_name=ENSG00000286009;ID=exon:NA12877_ch_T0001027:2;Name=ENSG00000286009;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13401764	13403621	.	-	.	source_gene_common_name=CDY4P;source_gene=ENSG00000228411.1;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;gene_id=NA12877_ch_G0000339;gene_biotype=processed_pseudogene;gene_name=CDY4P;gene_sources=liftoff;ID=NA12877_ch_G0000339;Name=CDY4P
NA12877_chrY	CAT	transcript	13401764	13403621	1000	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=NA12877_ch_T0001034;gene_id=NA12877_ch_G0000339;Parent=NA12877_ch_G0000339;transcript_name=NA12877_ch_T0001034;gene_name=CDY4P;ID=NA12877_ch_T0001034;Name=CDY4P
NA12877_chrY	CAT	exon	13401764	13402507	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=NA12877_ch_T0001034;gene_id=NA12877_ch_G0000339;Parent=NA12877_ch_T0001034;transcript_name=NA12877_ch_T0001034;gene_name=CDY4P;ID=exon:NA12877_ch_T0001034:0;Name=CDY4P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13402508	13402852	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=NA12877_ch_T0001034;gene_id=NA12877_ch_G0000339;Parent=NA12877_ch_T0001034;transcript_name=NA12877_ch_T0001034;gene_name=CDY4P;ID=intron:NA12877_ch_T0001034:0;Name=CDY4P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13402853	13403621	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=NA12877_ch_T0001034;gene_id=NA12877_ch_G0000339;Parent=NA12877_ch_T0001034;transcript_name=NA12877_ch_T0001034;gene_name=CDY4P;ID=exon:NA12877_ch_T0001034:1;Name=CDY4P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13503899	13520269	.	+	.	source_gene_common_name=DDX3Y;source_gene=ENSG00000067048.17;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;gene_id=NA12877_ch_G0000340;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff;ID=NA12877_ch_G0000340;Name=DDX3Y
NA12877_chrY	CAT	transcript	13503899	13518330	100	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_G0000340;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=NA12877_ch_T0001037;Name=DDX3Y
NA12877_chrY	CAT	exon	13503899	13504205	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13504206	13504725	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13504726	13504772	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13504728	13504772	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	13504728	13504730	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=start_codon:NA12877_ch_T0001037;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13504773	13507327	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13507328	13507385	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13507328	13507385	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13507386	13509150	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13509151	13509198	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13509151	13509198	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13509199	13511629	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13511630	13511759	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:4;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13511630	13511759	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13511760	13512517	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:4;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13512518	13512673	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:5;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13512518	13512673	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:4;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13512674	13512753	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:5;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13512754	13512853	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:6;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13512754	13512853	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:5;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13512854	13513508	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:6;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13513509	13513644	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:7;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13513509	13513644	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:6;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13513645	13514354	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:7;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13514355	13514440	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:8;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13514355	13514440	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:7;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13514441	13514674	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:8;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13514675	13514773	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:9;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13514675	13514773	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:8;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13514774	13514857	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:9;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13514858	13515018	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:10;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13514858	13515018	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:9;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13515019	13515420	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:10;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13515421	13515565	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:11;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13515421	13515565	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:10;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13515566	13515673	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:11;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13515674	13515818	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:12;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13515674	13515818	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:11;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13515819	13516051	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:12;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13516052	13516233	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:13;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13516052	13516233	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:12;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13516234	13516307	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:13;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13516308	13516425	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:14;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13516308	13516425	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:13;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13516426	13516697	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:14;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13516698	13516851	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:15;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13516698	13516851	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:14;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13516852	13517193	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:15;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13517194	13517333	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:16;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13517194	13517333	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:15;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13517334	13517833	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001037:16;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13517834	13518330	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001037:17;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13517834	13517913	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001037:16;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13517911	13517913	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=NA12877_ch_T0001037;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001037;transcript_name=NA12877_ch_T0001037;gene_name=DDX3Y;ID=stop_codon:NA12877_ch_T0001037;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13503909	13513644	100	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_G0000340;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=NA12877_ch_T0001038;Name=DDX3Y
NA12877_chrY	CAT	exon	13503909	13504205	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001038:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13504206	13504648	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001038:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13504649	13504772	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001038:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13504728	13504772	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001038:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	13504728	13504730	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=start_codon:NA12877_ch_T0001038;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13504773	13507327	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001038:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13507328	13507385	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001038:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13507328	13507385	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001038:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13507386	13509150	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001038:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13509151	13509198	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001038:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13509151	13509198	.	+	2	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001038:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13509199	13511629	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001038:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13511630	13511759	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001038:4;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13511630	13511759	.	+	2	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001038:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13511760	13512517	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001038:4;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13512518	13512673	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001038:5;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13512518	13512673	.	+	1	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001038:4;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13512674	13512753	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001038:5;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13512754	13512853	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001038:6;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13512754	13512853	.	+	1	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001038:5;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13512854	13513508	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001038:6;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13513509	13513644	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001038:7;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13513509	13513644	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=NA12877_ch_T0001038;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001038;transcript_name=NA12877_ch_T0001038;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001038:6;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13504640	13509487	1000	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=NA12877_ch_T0001039;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_G0000340;transcript_name=NA12877_ch_T0001039;gene_name=DDX3Y;ID=NA12877_ch_T0001039;Name=DDX3Y
NA12877_chrY	CAT	exon	13504640	13504772	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=NA12877_ch_T0001039;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001039;transcript_name=NA12877_ch_T0001039;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001039:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13504773	13507327	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=NA12877_ch_T0001039;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001039;transcript_name=NA12877_ch_T0001039;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001039:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13507328	13507385	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=NA12877_ch_T0001039;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001039;transcript_name=NA12877_ch_T0001039;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001039:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13507386	13509150	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=NA12877_ch_T0001039;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001039;transcript_name=NA12877_ch_T0001039;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001039:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13509151	13509487	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=NA12877_ch_T0001039;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001039;transcript_name=NA12877_ch_T0001039;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001039:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13504659	13520269	100	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_G0000340;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=NA12877_ch_T0001040;Name=DDX3Y
NA12877_chrY	CAT	exon	13504659	13504772	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13504728	13504772	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	13504728	13504730	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=start_codon:NA12877_ch_T0001040;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13504773	13507327	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13507328	13507385	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13507328	13507385	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13507386	13509150	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13509151	13509198	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13509151	13509198	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13509199	13511629	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13511630	13511759	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13511630	13511759	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13511760	13512517	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13512518	13512673	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:4;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13512518	13512673	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:4;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13512674	13512753	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:4;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13512754	13512853	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:5;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13512754	13512853	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:5;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13512854	13513508	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:5;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13513509	13513644	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:6;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13513509	13513644	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:6;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13513645	13514354	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:6;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13514355	13514440	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:7;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13514355	13514440	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:7;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13514441	13514674	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:7;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13514675	13514773	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:8;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13514675	13514773	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:8;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13514774	13514857	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:8;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13514858	13515018	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:9;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13514858	13515018	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:9;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13515019	13515420	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:9;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13515421	13515565	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:10;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13515421	13515565	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:10;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13515566	13515673	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:10;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13515674	13515818	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:11;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13515674	13515818	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:11;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13515819	13516051	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:11;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13516052	13516233	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:12;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13516052	13516233	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:12;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13516234	13516307	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:12;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13516308	13516425	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:13;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13516308	13516425	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:13;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13516426	13516697	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:13;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13516698	13516851	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:14;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13516698	13516851	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:14;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13516852	13517193	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:14;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13517194	13517333	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:15;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13517194	13517333	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:15;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13517334	13517833	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001040:15;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13517834	13520269	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001040:16;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13517834	13517913	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001040:16;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13517911	13517913	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=NA12877_ch_T0001040;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001040;transcript_name=NA12877_ch_T0001040;gene_name=DDX3Y;ID=stop_codon:NA12877_ch_T0001040;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13505529	13514440	100	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_G0000340;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=NA12877_ch_T0001041;Name=DDX3Y
NA12877_chrY	CAT	exon	13505529	13505606	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001041:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13505571	13505606	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001041:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	13505571	13505573	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=start_codon:NA12877_ch_T0001041;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13505607	13507327	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001041:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13507328	13507385	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001041:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13507328	13507385	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001041:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13507386	13509150	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001041:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13509151	13509198	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001041:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13509151	13509198	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001041:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13509199	13511629	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001041:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13511630	13511759	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001041:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13511630	13511759	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001041:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13511760	13512517	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001041:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13512518	13512673	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001041:4;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13512518	13512673	.	+	1	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001041:4;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13512674	13512753	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001041:4;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13512754	13512853	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001041:5;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13512754	13512853	.	+	1	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001041:5;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13512854	13513508	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001041:5;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13513509	13513644	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001041:6;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13513509	13513644	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001041:6;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13513645	13514354	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001041:6;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13514355	13514440	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001041:7;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13514355	13514440	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=NA12877_ch_T0001041;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001041;transcript_name=NA12877_ch_T0001041;gene_name=DDX3Y;ID=CDS:NA12877_ch_T0001041:7;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13512431	13513592	1000	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=NA12877_ch_T0001042;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_G0000340;transcript_name=NA12877_ch_T0001042;gene_name=DDX3Y;ID=NA12877_ch_T0001042;Name=DDX3Y
NA12877_chrY	CAT	exon	13512431	13512853	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=NA12877_ch_T0001042;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001042;transcript_name=NA12877_ch_T0001042;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001042:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13512854	13513508	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=NA12877_ch_T0001042;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001042;transcript_name=NA12877_ch_T0001042;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001042:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13513509	13513592	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=NA12877_ch_T0001042;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001042;transcript_name=NA12877_ch_T0001042;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001042:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13512754	13514690	1000	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=NA12877_ch_T0001043;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_G0000340;transcript_name=NA12877_ch_T0001043;gene_name=DDX3Y;ID=NA12877_ch_T0001043;Name=DDX3Y
NA12877_chrY	CAT	exon	13512754	13512853	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=NA12877_ch_T0001043;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001043;transcript_name=NA12877_ch_T0001043;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001043:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13512854	13513508	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=NA12877_ch_T0001043;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001043;transcript_name=NA12877_ch_T0001043;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001043:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13513509	13513644	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=NA12877_ch_T0001043;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001043;transcript_name=NA12877_ch_T0001043;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001043:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13513645	13514354	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=NA12877_ch_T0001043;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001043;transcript_name=NA12877_ch_T0001043;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001043:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13514355	13514690	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=NA12877_ch_T0001043;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001043;transcript_name=NA12877_ch_T0001043;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001043:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13512799	13515018	1000	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=NA12877_ch_T0001044;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_G0000340;transcript_name=NA12877_ch_T0001044;gene_name=DDX3Y;ID=NA12877_ch_T0001044;Name=DDX3Y
NA12877_chrY	CAT	exon	13512799	13512853	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=NA12877_ch_T0001044;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001044;transcript_name=NA12877_ch_T0001044;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001044:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13512854	13513508	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=NA12877_ch_T0001044;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001044;transcript_name=NA12877_ch_T0001044;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001044:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13513509	13513644	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=NA12877_ch_T0001044;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001044;transcript_name=NA12877_ch_T0001044;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001044:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13513645	13514354	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=NA12877_ch_T0001044;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001044;transcript_name=NA12877_ch_T0001044;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001044:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13514355	13514440	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=NA12877_ch_T0001044;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001044;transcript_name=NA12877_ch_T0001044;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001044:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13514441	13514674	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=NA12877_ch_T0001044;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001044;transcript_name=NA12877_ch_T0001044;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001044:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13514675	13515018	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=NA12877_ch_T0001044;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001044;transcript_name=NA12877_ch_T0001044;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001044:3;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13515287	13516144	1000	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=NA12877_ch_T0001045;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_G0000340;transcript_name=NA12877_ch_T0001045;gene_name=DDX3Y;ID=NA12877_ch_T0001045;Name=DDX3Y
NA12877_chrY	CAT	exon	13515287	13515565	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=NA12877_ch_T0001045;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001045;transcript_name=NA12877_ch_T0001045;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001045:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13515566	13515673	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=NA12877_ch_T0001045;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001045;transcript_name=NA12877_ch_T0001045;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001045:0;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13515674	13515818	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=NA12877_ch_T0001045;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001045;transcript_name=NA12877_ch_T0001045;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001045:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13515819	13516051	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=NA12877_ch_T0001045;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001045;transcript_name=NA12877_ch_T0001045;gene_name=DDX3Y;ID=intron:NA12877_ch_T0001045:1;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13516052	13516144	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=NA12877_ch_T0001045;gene_id=NA12877_ch_G0000340;Parent=NA12877_ch_T0001045;transcript_name=NA12877_ch_T0001045;gene_name=DDX3Y;ID=exon:NA12877_ch_T0001045:2;Name=DDX3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13529956	13547973	.	-	.	source_gene_common_name=CASKP1;source_gene=ENSG00000234059.1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;gene_id=NA12877_ch_G0000341;gene_biotype=unprocessed_pseudogene;gene_name=CASKP1;gene_sources=liftoff;ID=NA12877_ch_G0000341;Name=CASKP1
NA12877_chrY	CAT	transcript	13529956	13547973	1000	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_G0000341;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=NA12877_ch_T0001046;Name=CASKP1
NA12877_chrY	CAT	exon	13529956	13530118	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=exon:NA12877_ch_T0001046:0;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13530119	13534992	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=intron:NA12877_ch_T0001046:0;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13534993	13535077	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=exon:NA12877_ch_T0001046:1;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13535078	13545410	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=intron:NA12877_ch_T0001046:1;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13545411	13545454	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=exon:NA12877_ch_T0001046:2;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13545455	13545679	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=intron:NA12877_ch_T0001046:2;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13545680	13545714	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=exon:NA12877_ch_T0001046:3;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13545715	13545815	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=intron:NA12877_ch_T0001046:3;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13545816	13545863	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=exon:NA12877_ch_T0001046:4;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13545864	13546078	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=intron:NA12877_ch_T0001046:4;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13546079	13546098	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=exon:NA12877_ch_T0001046:5;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13546099	13547465	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=intron:NA12877_ch_T0001046:5;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13547466	13547569	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=exon:NA12877_ch_T0001046:6;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13547570	13547890	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=intron:NA12877_ch_T0001046:6;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13547891	13547973	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=NA12877_ch_T0001046;gene_id=NA12877_ch_G0000341;Parent=NA12877_ch_T0001046;transcript_name=NA12877_ch_T0001046;gene_name=CASKP1;ID=exon:NA12877_ch_T0001046:7;Name=CASKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13683581	13695596	.	+	.	source_gene_common_name=SFPQP1;source_gene=ENSG00000224035.1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;gene_id=NA12877_ch_G0000342;gene_biotype=processed_pseudogene;gene_name=SFPQP1;gene_sources=liftoff;ID=NA12877_ch_G0000342;Name=SFPQP1
NA12877_chrY	CAT	transcript	13683581	13695596	1000	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=NA12877_ch_T0001047;gene_id=NA12877_ch_G0000342;Parent=NA12877_ch_G0000342;transcript_name=NA12877_ch_T0001047;gene_name=SFPQP1;ID=NA12877_ch_T0001047;Name=SFPQP1
NA12877_chrY	CAT	exon	13683581	13684135	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=NA12877_ch_T0001047;gene_id=NA12877_ch_G0000342;Parent=NA12877_ch_T0001047;transcript_name=NA12877_ch_T0001047;gene_name=SFPQP1;ID=exon:NA12877_ch_T0001047:0;Name=SFPQP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13684136	13694365	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=NA12877_ch_T0001047;gene_id=NA12877_ch_G0000342;Parent=NA12877_ch_T0001047;transcript_name=NA12877_ch_T0001047;gene_name=SFPQP1;ID=intron:NA12877_ch_T0001047:0;Name=SFPQP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13694366	13695596	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=NA12877_ch_T0001047;gene_id=NA12877_ch_G0000342;Parent=NA12877_ch_T0001047;transcript_name=NA12877_ch_T0001047;gene_name=SFPQP1;ID=exon:NA12877_ch_T0001047:1;Name=SFPQP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13753721	13762004	.	-	.	source_gene_common_name=TAB3P1;source_gene=ENSG00000235462.2;gene_id=NA12877_ch_G0000343;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TAB3P1;gene_sources=liftoff;ID=NA12877_ch_G0000343;Name=TAB3P1
NA12877_chrY	CAT	transcript	13753721	13762004	1000	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=NA12877_ch_T0001048;gene_id=NA12877_ch_G0000343;Parent=NA12877_ch_G0000343;transcript_name=NA12877_ch_T0001048;gene_name=TAB3P1;ID=NA12877_ch_T0001048;Name=TAB3P1
NA12877_chrY	CAT	exon	13753721	13753814	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=NA12877_ch_T0001048;gene_id=NA12877_ch_G0000343;Parent=NA12877_ch_T0001048;transcript_name=NA12877_ch_T0001048;gene_name=TAB3P1;ID=exon:NA12877_ch_T0001048:0;Name=TAB3P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13753815	13759745	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=NA12877_ch_T0001048;gene_id=NA12877_ch_G0000343;Parent=NA12877_ch_T0001048;transcript_name=NA12877_ch_T0001048;gene_name=TAB3P1;ID=intron:NA12877_ch_T0001048:0;Name=TAB3P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13759746	13759906	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=NA12877_ch_T0001048;gene_id=NA12877_ch_G0000343;Parent=NA12877_ch_T0001048;transcript_name=NA12877_ch_T0001048;gene_name=TAB3P1;ID=exon:NA12877_ch_T0001048:1;Name=TAB3P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13759907	13760625	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=NA12877_ch_T0001048;gene_id=NA12877_ch_G0000343;Parent=NA12877_ch_T0001048;transcript_name=NA12877_ch_T0001048;gene_name=TAB3P1;ID=intron:NA12877_ch_T0001048:1;Name=TAB3P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13760626	13762004	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=NA12877_ch_T0001048;gene_id=NA12877_ch_G0000343;Parent=NA12877_ch_T0001048;transcript_name=NA12877_ch_T0001048;gene_name=TAB3P1;ID=exon:NA12877_ch_T0001048:2;Name=TAB3P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13759063	13761339	.	-	.	source_gene_common_name=ENSG00000290852;source_gene=ENSG00000290852.1;gene_id=NA12877_ch_G0000344;gene_biotype=lncRNA;gene_name=ENSG00000290852;gene_sources=liftoff;ID=NA12877_ch_G0000344;Name=ENSG00000290852
NA12877_chrY	CAT	transcript	13759063	13761339	1000	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=NA12877_ch_T0001049;gene_id=NA12877_ch_G0000344;Parent=NA12877_ch_G0000344;transcript_name=NA12877_ch_T0001049;gene_name=ENSG00000290852;ID=NA12877_ch_T0001049;Name=ENSG00000290852
NA12877_chrY	CAT	exon	13759063	13759259	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=NA12877_ch_T0001049;gene_id=NA12877_ch_G0000344;Parent=NA12877_ch_T0001049;transcript_name=NA12877_ch_T0001049;gene_name=ENSG00000290852;ID=exon:NA12877_ch_T0001049:0;Name=ENSG00000290852;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13759260	13760683	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=NA12877_ch_T0001049;gene_id=NA12877_ch_G0000344;Parent=NA12877_ch_T0001049;transcript_name=NA12877_ch_T0001049;gene_name=ENSG00000290852;ID=intron:NA12877_ch_T0001049:0;Name=ENSG00000290852;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13760684	13761339	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=NA12877_ch_T0001049;gene_id=NA12877_ch_G0000344;Parent=NA12877_ch_T0001049;transcript_name=NA12877_ch_T0001049;gene_name=ENSG00000290852;ID=exon:NA12877_ch_T0001049:1;Name=ENSG00000290852;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13830678	13831233	.	+	.	source_gene_common_name=DPPA2P1;source_gene=ENSG00000223915.1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;gene_id=NA12877_ch_G0000345;gene_biotype=processed_pseudogene;gene_name=DPPA2P1;gene_sources=liftoff;ID=NA12877_ch_G0000345;Name=DPPA2P1
NA12877_chrY	CAT	transcript	13830678	13831233	1000	+	.	source_transcript=ENST00000428060.1;source_transcript_name=DPPA2P1-201;source_gene=ENSG00000223915.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223915.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428060.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPPA2P1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;transcript_id=NA12877_ch_T0001050;gene_id=NA12877_ch_G0000345;Parent=NA12877_ch_G0000345;transcript_name=NA12877_ch_T0001050;gene_name=DPPA2P1;ID=NA12877_ch_T0001050;Name=DPPA2P1
NA12877_chrY	CAT	exon	13830678	13831233	.	+	.	source_transcript=ENST00000428060.1;source_transcript_name=DPPA2P1-201;source_gene=ENSG00000223915.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223915.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428060.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPPA2P1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;transcript_id=NA12877_ch_T0001050;gene_id=NA12877_ch_G0000345;Parent=NA12877_ch_T0001050;transcript_name=NA12877_ch_T0001050;gene_name=DPPA2P1;ID=exon:NA12877_ch_T0001050:0;Name=DPPA2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13834371	14080464	.	-	.	source_gene_common_name=UTY;source_gene=ENSG00000183878.16;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;gene_id=NA12877_ch_G0000346;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000346;Name=UTY
NA12877_chrY	CAT	transcript	13834371	14079760	1000	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=NA12877_ch_T0001051;Name=UTY
NA12877_chrY	CAT	exon	13834371	13834620	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13834371	13834620	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13834621	13850810	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13850811	13850981	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13959560	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=intron:NA12877_ch_T0001051:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079760	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=exon:NA12877_ch_T0001051:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=CDS:NA12877_ch_T0001051:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=NA12877_ch_T0001051;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001051;transcript_name=NA12877_ch_T0001051;gene_name=UTY;ID=start_codon:NA12877_ch_T0001051;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13834374	13959581	1000	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=NA12877_ch_T0001052;Name=UTY
NA12877_chrY	CAT	exon	13834374	13834620	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13834374	13834620	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13834621	13850810	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13850811	13850981	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13958257	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958258	13958413	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958258	13958413	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13958414	13958881	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958882	13959016	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958882	13959016	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959017	13959560	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=intron:NA12877_ch_T0001052:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959581	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=exon:NA12877_ch_T0001052:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959581	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=NA12877_ch_T0001052;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001052;transcript_name=NA12877_ch_T0001052;gene_name=UTY;ID=CDS:NA12877_ch_T0001052:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13834375	13845160	1000	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=NA12877_ch_T0001053;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001053;gene_name=UTY;ID=NA12877_ch_T0001053;Name=UTY
NA12877_chrY	CAT	exon	13834375	13834620	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=NA12877_ch_T0001053;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001053;transcript_name=NA12877_ch_T0001053;gene_name=UTY;ID=exon:NA12877_ch_T0001053:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13834621	13845008	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=NA12877_ch_T0001053;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001053;transcript_name=NA12877_ch_T0001053;gene_name=UTY;ID=intron:NA12877_ch_T0001053:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13845009	13845160	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=NA12877_ch_T0001053;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001053;transcript_name=NA12877_ch_T0001053;gene_name=UTY;ID=exon:NA12877_ch_T0001053:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13834393	14079793	1000	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=NA12877_ch_T0001054;Name=UTY
NA12877_chrY	CAT	exon	13834393	13834620	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13834621	13850810	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13906044	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13934011	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13934012	13934134	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13934014	13934134	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13934014	13934016	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001054;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13934135	13935356	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13959560	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=intron:NA12877_ch_T0001054:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079793	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=exon:NA12877_ch_T0001054:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=CDS:NA12877_ch_T0001054:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=NA12877_ch_T0001054;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001054;transcript_name=NA12877_ch_T0001054;gene_name=UTY;ID=start_codon:NA12877_ch_T0001054;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13834393	13935923	1000	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=NA12877_ch_T0001055;Name=UTY
NA12877_chrY	CAT	exon	13834393	13834620	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=exon:NA12877_ch_T0001055:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13834393	13834620	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=CDS:NA12877_ch_T0001055:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13834621	13860071	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=intron:NA12877_ch_T0001055:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=exon:NA12877_ch_T0001055:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=CDS:NA12877_ch_T0001055:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=intron:NA12877_ch_T0001055:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=exon:NA12877_ch_T0001055:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=CDS:NA12877_ch_T0001055:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=intron:NA12877_ch_T0001055:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=exon:NA12877_ch_T0001055:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=CDS:NA12877_ch_T0001055:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=intron:NA12877_ch_T0001055:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=exon:NA12877_ch_T0001055:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=CDS:NA12877_ch_T0001055:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=intron:NA12877_ch_T0001055:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=exon:NA12877_ch_T0001055:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=CDS:NA12877_ch_T0001055:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=intron:NA12877_ch_T0001055:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=exon:NA12877_ch_T0001055:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=CDS:NA12877_ch_T0001055:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=intron:NA12877_ch_T0001055:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=exon:NA12877_ch_T0001055:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=CDS:NA12877_ch_T0001055:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=intron:NA12877_ch_T0001055:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=exon:NA12877_ch_T0001055:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=CDS:NA12877_ch_T0001055:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=intron:NA12877_ch_T0001055:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=exon:NA12877_ch_T0001055:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=CDS:NA12877_ch_T0001055:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=intron:NA12877_ch_T0001055:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=exon:NA12877_ch_T0001055:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=CDS:NA12877_ch_T0001055:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=intron:NA12877_ch_T0001055:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13935923	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=exon:NA12877_ch_T0001055:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13935923	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=NA12877_ch_T0001055;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001055;transcript_name=NA12877_ch_T0001055;gene_name=UTY;ID=CDS:NA12877_ch_T0001055:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13834393	14079793	1000	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=NA12877_ch_T0001056;Name=UTY
NA12877_chrY	CAT	exon	13834393	13834620	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13834621	13850810	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13934011	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13934012	13934134	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13934014	13934134	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13934014	13934016	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001056;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13934135	13935356	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13959560	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=intron:NA12877_ch_T0001056:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079793	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=exon:NA12877_ch_T0001056:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=CDS:NA12877_ch_T0001056:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=NA12877_ch_T0001056;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001056;transcript_name=NA12877_ch_T0001056;gene_name=UTY;ID=start_codon:NA12877_ch_T0001056;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13848173	14080464	100	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=NA12877_ch_T0001057;Name=UTY
NA12877_chrY	CAT	exon	13848173	13849676	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13849650	13849676	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13849650	13849652	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001057;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13849677	13850810	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13850811	13850981	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13959560	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=intron:NA12877_ch_T0001057:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14080464	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=exon:NA12877_ch_T0001057:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=CDS:NA12877_ch_T0001057:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=NA12877_ch_T0001057;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001057;transcript_name=NA12877_ch_T0001057;gene_name=UTY;ID=start_codon:NA12877_ch_T0001057;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13848179	14079824	100	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=NA12877_ch_T0001058;Name=UTY
NA12877_chrY	CAT	exon	13848179	13849676	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13849650	13849676	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13849650	13849652	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001058;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13849677	13850810	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13850811	13850981	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13958257	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958258	13958413	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958258	13958413	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13958414	13958881	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958882	13959016	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958882	13959016	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959017	13959560	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=intron:NA12877_ch_T0001058:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079824	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=exon:NA12877_ch_T0001058:29;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=CDS:NA12877_ch_T0001058:29;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=NA12877_ch_T0001058;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001058;transcript_name=NA12877_ch_T0001058;gene_name=UTY;ID=start_codon:NA12877_ch_T0001058;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13848936	14079782	100	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=NA12877_ch_T0001059;Name=UTY
NA12877_chrY	CAT	exon	13848936	13849606	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13849580	13849606	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13849580	13849582	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001059;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13849607	13850810	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13850811	13850981	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13958257	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958258	13958347	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958258	13958347	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13958348	13958881	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958882	13959016	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958882	13959016	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959017	13959560	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=intron:NA12877_ch_T0001059:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079782	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=exon:NA12877_ch_T0001059:29;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=CDS:NA12877_ch_T0001059:29;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=NA12877_ch_T0001059;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001059;transcript_name=NA12877_ch_T0001059;gene_name=UTY;ID=start_codon:NA12877_ch_T0001059;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13849650	14079456	100	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=NA12877_ch_T0001060;Name=UTY
NA12877_chrY	CAT	exon	13849650	13849676	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13849650	13849676	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13849650	13849652	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001060;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13849677	13860071	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13958881	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958882	13959016	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958882	13959016	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959017	13959560	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=intron:NA12877_ch_T0001060:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079456	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=exon:NA12877_ch_T0001060:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=CDS:NA12877_ch_T0001060:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=NA12877_ch_T0001060;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001060;transcript_name=NA12877_ch_T0001060;gene_name=UTY;ID=start_codon:NA12877_ch_T0001060;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13849650	14079456	100	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=NA12877_ch_T0001061;Name=UTY
NA12877_chrY	CAT	exon	13849650	13849676	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13849650	13849676	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13849650	13849652	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001061;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13849677	13850810	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13850811	13850981	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954579	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954580	13954627	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954580	13954627	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13954628	13954796	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13959560	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=intron:NA12877_ch_T0001061:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079456	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=exon:NA12877_ch_T0001061:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=CDS:NA12877_ch_T0001061:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=NA12877_ch_T0001061;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001061;transcript_name=NA12877_ch_T0001061;gene_name=UTY;ID=start_codon:NA12877_ch_T0001061;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13849650	14079456	100	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=NA12877_ch_T0001062;Name=UTY
NA12877_chrY	CAT	exon	13849650	13849676	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13849650	13849676	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13849650	13849652	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001062;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13849677	13850810	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13850811	13850981	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13958257	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958258	13958347	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958258	13958347	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13958348	13958881	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958882	13959016	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958882	13959016	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959017	13959560	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13966060	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=intron:NA12877_ch_T0001062:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079456	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=exon:NA12877_ch_T0001062:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=CDS:NA12877_ch_T0001062:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=NA12877_ch_T0001062;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001062;transcript_name=NA12877_ch_T0001062;gene_name=UTY;ID=start_codon:NA12877_ch_T0001062;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13849650	14079456	100	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=NA12877_ch_T0001063;Name=UTY
NA12877_chrY	CAT	exon	13849650	13849676	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13849650	13849676	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13849650	13849652	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001063;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13849677	13850810	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13850811	13850981	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905979	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13958881	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958882	13959016	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958882	13959016	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959017	13959560	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=intron:NA12877_ch_T0001063:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079456	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=exon:NA12877_ch_T0001063:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=CDS:NA12877_ch_T0001063:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=NA12877_ch_T0001063;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001063;transcript_name=NA12877_ch_T0001063;gene_name=UTY;ID=start_codon:NA12877_ch_T0001063;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13849650	14079456	100	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=NA12877_ch_T0001064;Name=UTY
NA12877_chrY	CAT	exon	13849650	13849676	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13849650	13849676	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13849650	13849652	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001064;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13849677	13850810	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13850811	13850981	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13958257	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958258	13958413	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958258	13958413	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13958414	13959560	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=intron:NA12877_ch_T0001064:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079456	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=exon:NA12877_ch_T0001064:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=CDS:NA12877_ch_T0001064:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=NA12877_ch_T0001064;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001064;transcript_name=NA12877_ch_T0001064;gene_name=UTY;ID=start_codon:NA12877_ch_T0001064;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13849650	14079456	100	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=NA12877_ch_T0001065;Name=UTY
NA12877_chrY	CAT	exon	13849650	13849676	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13849650	13849676	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13849650	13849652	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001065;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13849677	13850810	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13850811	13850981	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13959560	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	14010787	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14079044	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=intron:NA12877_ch_T0001065:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079456	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=exon:NA12877_ch_T0001065:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=CDS:NA12877_ch_T0001065:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=NA12877_ch_T0001065;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001065;transcript_name=NA12877_ch_T0001065;gene_name=UTY;ID=start_codon:NA12877_ch_T0001065;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13849650	14079456	100	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=NA12877_ch_T0001066;Name=UTY
NA12877_chrY	CAT	exon	13849650	13849676	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13849650	13849676	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13849650	13849652	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001066;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13849677	13860071	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13955168	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955169	13955192	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955169	13955192	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13958881	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958882	13959016	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958882	13959016	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959017	13959560	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=intron:NA12877_ch_T0001066:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079456	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=exon:NA12877_ch_T0001066:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=CDS:NA12877_ch_T0001066:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=NA12877_ch_T0001066;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001066;transcript_name=NA12877_ch_T0001066;gene_name=UTY;ID=start_codon:NA12877_ch_T0001066;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13849650	14079456	100	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=NA12877_ch_T0001067;Name=UTY
NA12877_chrY	CAT	exon	13849650	13849676	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13849650	13849676	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13849650	13849652	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001067;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13849677	13850810	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13850811	13850981	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13850811	13850981	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13850982	13860071	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13860072	13860198	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13860072	13860198	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13860199	13897500	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13897501	13897642	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897501	13897642	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13958881	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13958882	13959016	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13958882	13959016	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959017	13959560	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:25;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:26;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=intron:NA12877_ch_T0001067:27;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079456	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=exon:NA12877_ch_T0001067:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=CDS:NA12877_ch_T0001067:28;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=NA12877_ch_T0001067;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001067;transcript_name=NA12877_ch_T0001067;gene_name=UTY;ID=start_codon:NA12877_ch_T0001067;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13897235	14080461	100	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=NA12877_ch_T0001069;Name=UTY
NA12877_chrY	CAT	exon	13897235	13897642	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13897497	13897642	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13897497	13897499	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001069;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13897643	13898750	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13898751	13898938	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13898751	13898938	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13898939	13902670	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13902671	13902785	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13902671	13902785	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13902786	13905192	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905193	13905341	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905193	13905341	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905342	13905831	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905832	13905906	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905832	13905906	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13905907	13905979	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13905980	13906044	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13905980	13906044	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13906045	13923348	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13959560	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:20;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:21;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:22;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=intron:NA12877_ch_T0001069:23;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14080461	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=exon:NA12877_ch_T0001069:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=CDS:NA12877_ch_T0001069:24;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=NA12877_ch_T0001069;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001069;transcript_name=NA12877_ch_T0001069;gene_name=UTY;ID=start_codon:NA12877_ch_T0001069;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13922828	14080461	100	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=NA12877_ch_T0001070;Name=UTY
NA12877_chrY	CAT	exon	13922828	13923162	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13922908	13923162	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13922908	13922910	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001070;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923163	13923348	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13923349	13923554	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13923349	13923554	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13923555	13924394	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13924395	13924500	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13924395	13924500	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13924501	13926014	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13926015	13926144	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13926015	13926144	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13926145	13935356	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13935357	13936129	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13935357	13936129	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13936130	13954796	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13954797	13955192	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13954797	13955192	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955193	13955716	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13955717	13955812	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13955717	13955812	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13955813	13957670	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13957671	13957763	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13957671	13957763	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13957764	13959560	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13959561	13959780	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13959561	13959780	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13959781	13960223	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13960224	13960322	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13960224	13960322	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13966061	13966187	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:10;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969050	13969143	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13993653	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:11;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13993654	13993688	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13993654	13993688	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:12;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:13;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:14;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:15;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:16;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:17;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=intron:NA12877_ch_T0001070:18;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14080461	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=exon:NA12877_ch_T0001070:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=CDS:NA12877_ch_T0001070:19;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=NA12877_ch_T0001070;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001070;transcript_name=NA12877_ch_T0001070;gene_name=UTY;ID=start_codon:NA12877_ch_T0001070;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13960282	14079331	1000	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=NA12877_ch_T0001071;Name=UTY
NA12877_chrY	CAT	exon	13960282	13960322	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=exon:NA12877_ch_T0001071:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13960323	13966060	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=intron:NA12877_ch_T0001071:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13966061	13966187	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=exon:NA12877_ch_T0001071:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13966188	13969049	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=intron:NA12877_ch_T0001071:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13969050	13969143	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=exon:NA12877_ch_T0001071:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13969112	13969143	.	-	2	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=CDS:NA12877_ch_T0001071:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13969112	13969114	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001071;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13969144	13996712	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=intron:NA12877_ch_T0001071:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=exon:NA12877_ch_T0001071:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996713	13996767	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=CDS:NA12877_ch_T0001071:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=intron:NA12877_ch_T0001071:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=exon:NA12877_ch_T0001071:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=CDS:NA12877_ch_T0001071:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=intron:NA12877_ch_T0001071:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=exon:NA12877_ch_T0001071:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=CDS:NA12877_ch_T0001071:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=intron:NA12877_ch_T0001071:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=exon:NA12877_ch_T0001071:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=CDS:NA12877_ch_T0001071:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=intron:NA12877_ch_T0001071:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=exon:NA12877_ch_T0001071:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=CDS:NA12877_ch_T0001071:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=intron:NA12877_ch_T0001071:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=exon:NA12877_ch_T0001071:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=CDS:NA12877_ch_T0001071:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=intron:NA12877_ch_T0001071:8;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079331	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=exon:NA12877_ch_T0001071:9;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079331	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=NA12877_ch_T0001071;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001071;transcript_name=NA12877_ch_T0001071;gene_name=UTY;ID=CDS:NA12877_ch_T0001071:7;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13992947	14079295	1000	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=NA12877_ch_T0001072;Name=UTY
NA12877_chrY	CAT	exon	13992947	13993688	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=exon:NA12877_ch_T0001072:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13993689	13996712	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=intron:NA12877_ch_T0001072:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	13996713	13996767	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=exon:NA12877_ch_T0001072:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=intron:NA12877_ch_T0001072:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=exon:NA12877_ch_T0001072:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=intron:NA12877_ch_T0001072:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=exon:NA12877_ch_T0001072:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=intron:NA12877_ch_T0001072:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=exon:NA12877_ch_T0001072:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=intron:NA12877_ch_T0001072:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=exon:NA12877_ch_T0001072:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=intron:NA12877_ch_T0001072:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079295	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=NA12877_ch_T0001072;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001072;transcript_name=NA12877_ch_T0001072;gene_name=UTY;ID=exon:NA12877_ch_T0001072:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	13996097	14079769	100	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=NA12877_ch_T0001073;Name=UTY
NA12877_chrY	CAT	exon	13996097	13996767	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=exon:NA12877_ch_T0001073:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	13996699	13996767	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=CDS:NA12877_ch_T0001073:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	13996699	13996701	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=stop_codon:NA12877_ch_T0001073;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	13996768	14010787	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=intron:NA12877_ch_T0001073:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14010788	14010908	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=exon:NA12877_ch_T0001073:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14010788	14010908	.	-	1	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=CDS:NA12877_ch_T0001073:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14010909	14014529	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=intron:NA12877_ch_T0001073:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14014530	14014588	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=exon:NA12877_ch_T0001073:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14014530	14014588	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=CDS:NA12877_ch_T0001073:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14014589	14048807	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=intron:NA12877_ch_T0001073:2;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14048808	14048857	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=exon:NA12877_ch_T0001073:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14048808	14048857	.	-	2	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=CDS:NA12877_ch_T0001073:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14048858	14069911	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=intron:NA12877_ch_T0001073:3;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14069912	14070020	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=exon:NA12877_ch_T0001073:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14069912	14070020	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=CDS:NA12877_ch_T0001073:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14070021	14079044	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=intron:NA12877_ch_T0001073:4;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079045	14079108	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=exon:NA12877_ch_T0001073:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079045	14079108	.	-	1	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=CDS:NA12877_ch_T0001073:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=intron:NA12877_ch_T0001073:5;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079769	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=exon:NA12877_ch_T0001073:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14079305	14079456	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=CDS:NA12877_ch_T0001073:6;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14079454	14079456	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=NA12877_ch_T0001073;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001073;transcript_name=NA12877_ch_T0001073;gene_name=UTY;ID=start_codon:NA12877_ch_T0001073;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	14078833	14079714	1000	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=NA12877_ch_T0001074;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_G0000346;transcript_name=NA12877_ch_T0001074;gene_name=UTY;ID=NA12877_ch_T0001074;Name=UTY
NA12877_chrY	CAT	exon	14078833	14079108	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=NA12877_ch_T0001074;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001074;transcript_name=NA12877_ch_T0001074;gene_name=UTY;ID=exon:NA12877_ch_T0001074:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14079109	14079304	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=NA12877_ch_T0001074;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001074;transcript_name=NA12877_ch_T0001074;gene_name=UTY;ID=intron:NA12877_ch_T0001074:0;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14079305	14079714	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=NA12877_ch_T0001074;gene_id=NA12877_ch_G0000346;Parent=NA12877_ch_T0001074;transcript_name=NA12877_ch_T0001074;gene_name=UTY;ID=exon:NA12877_ch_T0001074:1;Name=UTY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	13886432	13887172	.	+	.	source_gene_common_name=PSMA6P1;source_gene=ENSG00000215414.4;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;gene_id=NA12877_ch_G0000347;gene_biotype=processed_pseudogene;gene_name=PSMA6P1;gene_sources=liftoff;ID=NA12877_ch_G0000347;Name=PSMA6P1
NA12877_chrY	CAT	transcript	13886432	13887172	1000	+	.	source_transcript=ENST00000400275.2;source_transcript_name=PSMA6P1-201;source_gene=ENSG00000215414.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215414.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000400275.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400275.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PSMA6P1;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;transcript_id=NA12877_ch_T0001068;gene_id=NA12877_ch_G0000347;Parent=NA12877_ch_G0000347;transcript_name=NA12877_ch_T0001068;gene_name=PSMA6P1;ID=NA12877_ch_T0001068;Name=PSMA6P1
NA12877_chrY	CAT	exon	13886432	13887172	.	+	.	source_transcript=ENST00000400275.2;source_transcript_name=PSMA6P1-201;source_gene=ENSG00000215414.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215414.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000400275.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400275.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PSMA6P1;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;transcript_id=NA12877_ch_T0001068;gene_id=NA12877_ch_G0000347;Parent=NA12877_ch_T0001068;transcript_name=NA12877_ch_T0001068;gene_name=PSMA6P1;ID=exon:NA12877_ch_T0001068:0;Name=PSMA6P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	14165744	14226087	.	+	.	source_gene_common_name=ENSG00000297994;source_gene=ENSG00000297994.1;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;gene_id=NA12877_ch_G0000348;gene_biotype=lncRNA;gene_name=ENSG00000297994;gene_sources=liftoff;ID=NA12877_ch_G0000348;Name=ENSG00000297994
NA12877_chrY	CAT	transcript	14165744	14226087	1000	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=NA12877_ch_T0001075;gene_id=NA12877_ch_G0000348;Parent=NA12877_ch_G0000348;transcript_name=NA12877_ch_T0001075;gene_name=ENSG00000297994;ID=NA12877_ch_T0001075;Name=ENSG00000297994
NA12877_chrY	CAT	exon	14165744	14165787	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=NA12877_ch_T0001075;gene_id=NA12877_ch_G0000348;Parent=NA12877_ch_T0001075;transcript_name=NA12877_ch_T0001075;gene_name=ENSG00000297994;ID=exon:NA12877_ch_T0001075:0;Name=ENSG00000297994;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14165788	14166556	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=NA12877_ch_T0001075;gene_id=NA12877_ch_G0000348;Parent=NA12877_ch_T0001075;transcript_name=NA12877_ch_T0001075;gene_name=ENSG00000297994;ID=intron:NA12877_ch_T0001075:0;Name=ENSG00000297994;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14166557	14166628	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=NA12877_ch_T0001075;gene_id=NA12877_ch_G0000348;Parent=NA12877_ch_T0001075;transcript_name=NA12877_ch_T0001075;gene_name=ENSG00000297994;ID=exon:NA12877_ch_T0001075:1;Name=ENSG00000297994;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14166629	14225766	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=NA12877_ch_T0001075;gene_id=NA12877_ch_G0000348;Parent=NA12877_ch_T0001075;transcript_name=NA12877_ch_T0001075;gene_name=ENSG00000297994;ID=intron:NA12877_ch_T0001075:1;Name=ENSG00000297994;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14225767	14226087	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=NA12877_ch_T0001075;gene_id=NA12877_ch_G0000348;Parent=NA12877_ch_T0001075;transcript_name=NA12877_ch_T0001075;gene_name=ENSG00000297994;ID=exon:NA12877_ch_T0001075:2;Name=ENSG00000297994;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	14303695	14305820	.	+	.	source_gene_common_name=TMSB4Y;source_gene=ENSG00000154620.6;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;gene_id=NA12877_ch_G0000349;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=NA12877_ch_G0000349;Name=TMSB4Y
NA12877_chrY	CAT	transcript	14303695	14305820	100	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=NA12877_ch_T0001076;gene_id=NA12877_ch_G0000349;Parent=NA12877_ch_G0000349;transcript_name=NA12877_ch_T0001076;gene_name=TMSB4Y;ID=NA12877_ch_T0001076;Name=TMSB4Y
NA12877_chrY	CAT	exon	14303695	14304231	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=NA12877_ch_T0001076;gene_id=NA12877_ch_G0000349;Parent=NA12877_ch_T0001076;transcript_name=NA12877_ch_T0001076;gene_name=TMSB4Y;ID=exon:NA12877_ch_T0001076:0;Name=TMSB4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14304132	14304231	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=NA12877_ch_T0001076;gene_id=NA12877_ch_G0000349;Parent=NA12877_ch_T0001076;transcript_name=NA12877_ch_T0001076;gene_name=TMSB4Y;ID=CDS:NA12877_ch_T0001076:0;Name=TMSB4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14304132	14304134	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=NA12877_ch_T0001076;gene_id=NA12877_ch_G0000349;Parent=NA12877_ch_T0001076;transcript_name=NA12877_ch_T0001076;gene_name=TMSB4Y;ID=start_codon:NA12877_ch_T0001076;Name=TMSB4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14304232	14305020	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=NA12877_ch_T0001076;gene_id=NA12877_ch_G0000349;Parent=NA12877_ch_T0001076;transcript_name=NA12877_ch_T0001076;gene_name=TMSB4Y;ID=intron:NA12877_ch_T0001076:0;Name=TMSB4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14305021	14305820	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=NA12877_ch_T0001076;gene_id=NA12877_ch_G0000349;Parent=NA12877_ch_T0001076;transcript_name=NA12877_ch_T0001076;gene_name=TMSB4Y;ID=exon:NA12877_ch_T0001076:1;Name=TMSB4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14305021	14305055	.	+	2	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=NA12877_ch_T0001076;gene_id=NA12877_ch_G0000349;Parent=NA12877_ch_T0001076;transcript_name=NA12877_ch_T0001076;gene_name=TMSB4Y;ID=CDS:NA12877_ch_T0001076:1;Name=TMSB4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	14305053	14305055	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=NA12877_ch_T0001076;gene_id=NA12877_ch_G0000349;Parent=NA12877_ch_T0001076;transcript_name=NA12877_ch_T0001076;gene_name=TMSB4Y;ID=stop_codon:NA12877_ch_T0001076;Name=TMSB4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	14303698	14516064	.	+	.	source_gene_common_name=ENSG00000290853;source_gene=ENSG00000290853.2;gene_id=NA12877_ch_G0000350;gene_biotype=lncRNA;gene_name=ENSG00000290853;gene_sources=liftoff;ID=NA12877_ch_G0000350;Name=ENSG00000290853
NA12877_chrY	CAT	transcript	14303698	14488799	1000	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_G0000350;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=NA12877_ch_T0001077;Name=ENSG00000290853
NA12877_chrY	CAT	exon	14303698	14304231	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001077:0;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14304232	14354457	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001077:0;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14354458	14354607	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001077:1;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14354608	14458335	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001077:1;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14458336	14458465	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001077:2;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14458466	14459486	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001077:2;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14459487	14459640	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001077:3;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14459641	14468885	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001077:3;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14468886	14468947	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001077:4;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14468948	14471451	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001077:4;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14471452	14471617	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001077:5;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14471618	14487076	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001077:5;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14487077	14488799	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001077;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001077;transcript_name=NA12877_ch_T0001077;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001077:6;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	14351591	14458413	1000	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001079;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_G0000350;transcript_name=NA12877_ch_T0001079;gene_name=ENSG00000290853;ID=NA12877_ch_T0001079;Name=ENSG00000290853
NA12877_chrY	CAT	exon	14351591	14351803	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001079;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001079;transcript_name=NA12877_ch_T0001079;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001079:0;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14351804	14352891	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001079;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001079;transcript_name=NA12877_ch_T0001079;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001079:0;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14352892	14352957	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001079;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001079;transcript_name=NA12877_ch_T0001079;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001079:1;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14352958	14354457	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001079;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001079;transcript_name=NA12877_ch_T0001079;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001079:1;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14354458	14354607	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001079;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001079;transcript_name=NA12877_ch_T0001079;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001079:2;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14354608	14390736	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001079;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001079;transcript_name=NA12877_ch_T0001079;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001079:2;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14390737	14390784	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001079;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001079;transcript_name=NA12877_ch_T0001079;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001079:3;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14390785	14454262	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001079;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001079;transcript_name=NA12877_ch_T0001079;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001079:3;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14454263	14454396	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001079;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001079;transcript_name=NA12877_ch_T0001079;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001079:4;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14454397	14458335	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001079;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001079;transcript_name=NA12877_ch_T0001079;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001079:4;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14458336	14458413	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001079;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001079;transcript_name=NA12877_ch_T0001079;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001079:5;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	14352896	14471525	1000	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_G0000350;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=NA12877_ch_T0001080;Name=ENSG00000290853
NA12877_chrY	CAT	exon	14352896	14352957	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001080:0;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14352958	14354457	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001080:0;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14354458	14354607	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001080:1;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14354608	14390736	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001080:1;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14390737	14390784	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001080:2;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14390785	14458335	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001080:2;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14458336	14458465	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001080:3;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14458466	14459486	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001080:3;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14459487	14459640	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001080:4;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14459641	14468885	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001080:4;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14468886	14468947	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001080:5;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14468948	14471451	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001080:5;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14471452	14471525	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001080;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001080;transcript_name=NA12877_ch_T0001080;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001080:6;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	14471501	14516064	1000	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001081;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_G0000350;transcript_name=NA12877_ch_T0001081;gene_name=ENSG00000290853;ID=NA12877_ch_T0001081;Name=ENSG00000290853
NA12877_chrY	CAT	exon	14471501	14471617	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001081;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001081;transcript_name=NA12877_ch_T0001081;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001081:0;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14471618	14487076	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001081;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001081;transcript_name=NA12877_ch_T0001081;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001081:0;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14487077	14487282	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001081;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001081;transcript_name=NA12877_ch_T0001081;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001081:1;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14487283	14515585	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001081;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001081;transcript_name=NA12877_ch_T0001081;gene_name=ENSG00000290853;ID=intron:NA12877_ch_T0001081:1;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14515586	14516064	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=NA12877_ch_T0001081;gene_id=NA12877_ch_G0000350;Parent=NA12877_ch_T0001081;transcript_name=NA12877_ch_T0001081;gene_name=ENSG00000290853;ID=exon:NA12877_ch_T0001081:2;Name=ENSG00000290853;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	14351454	14515644	.	+	.	source_gene_common_name=ANOS2P;source_gene=ENSG00000241859.8;gene_id=NA12877_ch_G0000351;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ANOS2P;gene_sources=liftoff;ID=NA12877_ch_G0000351;Name=ANOS2P
NA12877_chrY	CAT	transcript	14351454	14515644	1000	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_G0000351;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=NA12877_ch_T0001078;Name=ANOS2P
NA12877_chrY	CAT	exon	14351454	14351803	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=exon:NA12877_ch_T0001078:0;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14351804	14390736	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=intron:NA12877_ch_T0001078:0;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14390737	14390784	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=exon:NA12877_ch_T0001078:1;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14390785	14458320	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=intron:NA12877_ch_T0001078:1;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14458321	14458543	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=exon:NA12877_ch_T0001078:2;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14458544	14468885	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=intron:NA12877_ch_T0001078:2;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14468886	14469069	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=exon:NA12877_ch_T0001078:3;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14469070	14471500	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=intron:NA12877_ch_T0001078:3;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14471501	14471617	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=exon:NA12877_ch_T0001078:4;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14471618	14487076	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=intron:NA12877_ch_T0001078:4;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14487077	14487282	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=exon:NA12877_ch_T0001078:5;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14487283	14502692	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=intron:NA12877_ch_T0001078:5;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14502693	14502787	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=exon:NA12877_ch_T0001078:6;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14502788	14505499	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=intron:NA12877_ch_T0001078:6;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14505500	14505670	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=exon:NA12877_ch_T0001078:7;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14505671	14506644	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=intron:NA12877_ch_T0001078:7;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14506645	14506865	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=exon:NA12877_ch_T0001078:8;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14506866	14507990	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=intron:NA12877_ch_T0001078:8;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14507991	14508132	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=exon:NA12877_ch_T0001078:9;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14508133	14515585	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=intron:NA12877_ch_T0001078:9;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14515586	14515644	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=NA12877_ch_T0001078;gene_id=NA12877_ch_G0000351;Parent=NA12877_ch_T0001078;transcript_name=NA12877_ch_T0001078;gene_name=ANOS2P;ID=exon:NA12877_ch_T0001078:10;Name=ANOS2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	14585576	14586277	.	-	.	source_gene_common_name=VCY;source_gene=ENSG00000129864.7;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;gene_id=NA12877_ch_G0000352;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff;ID=NA12877_ch_G0000352;Name=VCY
NA12877_chrY	CAT	transcript	14585576	14586277	100	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=NA12877_ch_T0001082;gene_id=NA12877_ch_G0000352;Parent=NA12877_ch_G0000352;transcript_name=NA12877_ch_T0001082;gene_name=VCY;ID=NA12877_ch_T0001082;Name=VCY
NA12877_chrY	CAT	exon	14585576	14585950	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=NA12877_ch_T0001082;gene_id=NA12877_ch_G0000352;Parent=NA12877_ch_T0001082;transcript_name=NA12877_ch_T0001082;gene_name=VCY;ID=exon:NA12877_ch_T0001082:0;Name=VCY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14585675	14585950	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=NA12877_ch_T0001082;gene_id=NA12877_ch_G0000352;Parent=NA12877_ch_T0001082;transcript_name=NA12877_ch_T0001082;gene_name=VCY;ID=CDS:NA12877_ch_T0001082:0;Name=VCY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	14585675	14585677	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=NA12877_ch_T0001082;gene_id=NA12877_ch_G0000352;Parent=NA12877_ch_T0001082;transcript_name=NA12877_ch_T0001082;gene_name=VCY;ID=stop_codon:NA12877_ch_T0001082;Name=VCY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14585951	14586142	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=NA12877_ch_T0001082;gene_id=NA12877_ch_G0000352;Parent=NA12877_ch_T0001082;transcript_name=NA12877_ch_T0001082;gene_name=VCY;ID=intron:NA12877_ch_T0001082:0;Name=VCY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14586143	14586277	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=NA12877_ch_T0001082;gene_id=NA12877_ch_G0000352;Parent=NA12877_ch_T0001082;transcript_name=NA12877_ch_T0001082;gene_name=VCY;ID=exon:NA12877_ch_T0001082:1;Name=VCY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14586143	14586244	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=NA12877_ch_T0001082;gene_id=NA12877_ch_G0000352;Parent=NA12877_ch_T0001082;transcript_name=NA12877_ch_T0001082;gene_name=VCY;ID=CDS:NA12877_ch_T0001082:1;Name=VCY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14586242	14586244	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=NA12877_ch_T0001082;gene_id=NA12877_ch_G0000352;Parent=NA12877_ch_T0001082;transcript_name=NA12877_ch_T0001082;gene_name=VCY;ID=start_codon:NA12877_ch_T0001082;Name=VCY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	14656027	14656758	.	+	.	source_gene_common_name=VCY1B;source_gene=ENSG00000129862.7;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;gene_id=NA12877_ch_G0000353;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff;ID=NA12877_ch_G0000353;Name=VCY1B
NA12877_chrY	CAT	transcript	14656027	14656758	100	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=NA12877_ch_T0001083;gene_id=NA12877_ch_G0000353;Parent=NA12877_ch_G0000353;transcript_name=NA12877_ch_T0001083;gene_name=VCY1B;ID=NA12877_ch_T0001083;Name=VCY1B
NA12877_chrY	CAT	exon	14656027	14656191	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=NA12877_ch_T0001083;gene_id=NA12877_ch_G0000353;Parent=NA12877_ch_T0001083;transcript_name=NA12877_ch_T0001083;gene_name=VCY1B;ID=exon:NA12877_ch_T0001083:0;Name=VCY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14656090	14656191	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=NA12877_ch_T0001083;gene_id=NA12877_ch_G0000353;Parent=NA12877_ch_T0001083;transcript_name=NA12877_ch_T0001083;gene_name=VCY1B;ID=CDS:NA12877_ch_T0001083:0;Name=VCY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	14656090	14656092	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=NA12877_ch_T0001083;gene_id=NA12877_ch_G0000353;Parent=NA12877_ch_T0001083;transcript_name=NA12877_ch_T0001083;gene_name=VCY1B;ID=start_codon:NA12877_ch_T0001083;Name=VCY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14656192	14656383	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=NA12877_ch_T0001083;gene_id=NA12877_ch_G0000353;Parent=NA12877_ch_T0001083;transcript_name=NA12877_ch_T0001083;gene_name=VCY1B;ID=intron:NA12877_ch_T0001083:0;Name=VCY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14656384	14656758	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=NA12877_ch_T0001083;gene_id=NA12877_ch_G0000353;Parent=NA12877_ch_T0001083;transcript_name=NA12877_ch_T0001083;gene_name=VCY1B;ID=exon:NA12877_ch_T0001083:1;Name=VCY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	14656384	14656659	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=NA12877_ch_T0001083;gene_id=NA12877_ch_G0000353;Parent=NA12877_ch_T0001083;transcript_name=NA12877_ch_T0001083;gene_name=VCY1B;ID=CDS:NA12877_ch_T0001083:1;Name=VCY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	14656657	14656659	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=NA12877_ch_T0001083;gene_id=NA12877_ch_G0000353;Parent=NA12877_ch_T0001083;transcript_name=NA12877_ch_T0001083;gene_name=VCY1B;ID=stop_codon:NA12877_ch_T0001083;Name=VCY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	14680875	14686400	.	+	.	source_gene_common_name=PNPLA4P1;source_gene=ENSG00000235451.1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;gene_id=NA12877_ch_G0000354;gene_biotype=unprocessed_pseudogene;gene_name=PNPLA4P1;gene_sources=liftoff;ID=NA12877_ch_G0000354;Name=PNPLA4P1
NA12877_chrY	CAT	transcript	14680875	14686400	1000	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=NA12877_ch_T0001084;gene_id=NA12877_ch_G0000354;Parent=NA12877_ch_G0000354;transcript_name=NA12877_ch_T0001084;gene_name=PNPLA4P1;ID=NA12877_ch_T0001084;Name=PNPLA4P1
NA12877_chrY	CAT	exon	14680875	14680969	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=NA12877_ch_T0001084;gene_id=NA12877_ch_G0000354;Parent=NA12877_ch_T0001084;transcript_name=NA12877_ch_T0001084;gene_name=PNPLA4P1;ID=exon:NA12877_ch_T0001084:0;Name=PNPLA4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14680970	14681105	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=NA12877_ch_T0001084;gene_id=NA12877_ch_G0000354;Parent=NA12877_ch_T0001084;transcript_name=NA12877_ch_T0001084;gene_name=PNPLA4P1;ID=intron:NA12877_ch_T0001084:0;Name=PNPLA4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14681106	14681249	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=NA12877_ch_T0001084;gene_id=NA12877_ch_G0000354;Parent=NA12877_ch_T0001084;transcript_name=NA12877_ch_T0001084;gene_name=PNPLA4P1;ID=exon:NA12877_ch_T0001084:1;Name=PNPLA4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14681250	14686334	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=NA12877_ch_T0001084;gene_id=NA12877_ch_G0000354;Parent=NA12877_ch_T0001084;transcript_name=NA12877_ch_T0001084;gene_name=PNPLA4P1;ID=intron:NA12877_ch_T0001084:1;Name=PNPLA4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14686335	14686400	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=NA12877_ch_T0001084;gene_id=NA12877_ch_G0000354;Parent=NA12877_ch_T0001084;transcript_name=NA12877_ch_T0001084;gene_name=PNPLA4P1;ID=exon:NA12877_ch_T0001084:2;Name=PNPLA4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	14701388	14701523	.	-	.	source_gene_common_name=ENSG00000289706;source_gene=ENSG00000289706.1;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;gene_id=NA12877_ch_G0000355;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000289706;gene_sources=liftoff;ID=NA12877_ch_G0000355;Name=ENSG00000289706
NA12877_chrY	CAT	transcript	14701388	14701523	1000	-	.	source_transcript=ENST00000696463.1;source_transcript_name=ENST00000696463;source_gene=ENSG00000289706.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289706.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696463.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289706;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;transcript_id=NA12877_ch_T0001085;gene_id=NA12877_ch_G0000355;Parent=NA12877_ch_G0000355;transcript_name=NA12877_ch_T0001085;gene_name=ENSG00000289706;ID=NA12877_ch_T0001085;Name=ENSG00000289706
NA12877_chrY	CAT	exon	14701388	14701523	.	-	.	source_transcript=ENST00000696463.1;source_transcript_name=ENST00000696463;source_gene=ENSG00000289706.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289706.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289706;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;transcript_id=NA12877_ch_T0001085;gene_id=NA12877_ch_G0000355;Parent=NA12877_ch_T0001085;transcript_name=NA12877_ch_T0001085;gene_name=ENSG00000289706;ID=exon:NA12877_ch_T0001085:0;Name=ENSG00000289706;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	14876021	14877298	.	-	.	source_gene_common_name=ENSG00000223517;source_gene=ENSG00000223517.1;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;gene_id=NA12877_ch_G0000356;gene_biotype=lncRNA;gene_name=ENSG00000223517;gene_sources=liftoff;ID=NA12877_ch_G0000356;Name=ENSG00000223517
NA12877_chrY	CAT	transcript	14876021	14877298	1000	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=NA12877_ch_T0001086;gene_id=NA12877_ch_G0000356;Parent=NA12877_ch_G0000356;transcript_name=NA12877_ch_T0001086;gene_name=ENSG00000223517;ID=NA12877_ch_T0001086;Name=ENSG00000223517
NA12877_chrY	CAT	exon	14876021	14876420	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=NA12877_ch_T0001086;gene_id=NA12877_ch_G0000356;Parent=NA12877_ch_T0001086;transcript_name=NA12877_ch_T0001086;gene_name=ENSG00000223517;ID=exon:NA12877_ch_T0001086:0;Name=ENSG00000223517;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	14876421	14877158	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=NA12877_ch_T0001086;gene_id=NA12877_ch_G0000356;Parent=NA12877_ch_T0001086;transcript_name=NA12877_ch_T0001086;gene_name=ENSG00000223517;ID=intron:NA12877_ch_T0001086:0;Name=ENSG00000223517;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	14877159	14877298	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=NA12877_ch_T0001086;gene_id=NA12877_ch_G0000356;Parent=NA12877_ch_T0001086;transcript_name=NA12877_ch_T0001086;gene_name=ENSG00000223517;ID=exon:NA12877_ch_T0001086:1;Name=ENSG00000223517;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	15122447	15445518	.	+	.	source_gene_common_name=NLGN4Y;source_gene=ENSG00000165246.15;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;gene_id=NA12877_ch_G0000357;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff;ID=NA12877_ch_G0000357;Name=NLGN4Y
NA12877_chrY	CAT	transcript	15122447	15445503	100	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_G0000357;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=NA12877_ch_T0001087;Name=NLGN4Y
NA12877_chrY	CAT	exon	15122447	15122815	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001087:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15122816	15221881	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001087:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15221882	15222464	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001087:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15221993	15222464	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001087:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	15221993	15221995	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=start_codon:NA12877_ch_T0001087;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15222465	15319327	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001087:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15319328	15319387	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001087:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15319328	15319387	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001087:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15319388	15322985	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001087:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15322986	15323138	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001087:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15322986	15323138	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001087:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15323139	15424051	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001087:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15424052	15424237	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001087:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15424052	15424237	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001087:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15424238	15429593	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001087:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15429594	15430383	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001087:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15429594	15430383	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001087:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15430384	15440276	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001087:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15440277	15445503	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001087:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15440277	15441126	.	+	1	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001087:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	15441124	15441126	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=NA12877_ch_T0001087;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001087;transcript_name=NA12877_ch_T0001087;gene_name=NLGN4Y;ID=stop_codon:NA12877_ch_T0001087;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	15122512	15222370	1000	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=NA12877_ch_T0001088;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_G0000357;transcript_name=NA12877_ch_T0001088;gene_name=NLGN4Y;ID=NA12877_ch_T0001088;Name=NLGN4Y
NA12877_chrY	CAT	exon	15122512	15122815	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=NA12877_ch_T0001088;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001088;transcript_name=NA12877_ch_T0001088;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001088:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15122816	15221881	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=NA12877_ch_T0001088;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001088;transcript_name=NA12877_ch_T0001088;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001088:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15221882	15222370	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=NA12877_ch_T0001088;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001088;transcript_name=NA12877_ch_T0001088;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001088:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	15122626	15445514	100	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_G0000357;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=NA12877_ch_T0001089;Name=NLGN4Y
NA12877_chrY	CAT	exon	15122626	15122815	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001089:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15122816	15319327	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001089:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15319328	15319387	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001089:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15319388	15322985	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001089:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15322986	15323138	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001089:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15323018	15323138	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001089:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	15323018	15323020	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=start_codon:NA12877_ch_T0001089;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15323139	15424051	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001089:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15424052	15424237	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001089:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15424052	15424237	.	+	2	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001089:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15424238	15429593	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001089:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15429594	15430383	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001089:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15429594	15430383	.	+	2	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001089:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15430384	15440276	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001089:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15440277	15445514	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001089:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15440277	15441126	.	+	1	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001089:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	15441124	15441126	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=NA12877_ch_T0001089;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001089;transcript_name=NA12877_ch_T0001089;gene_name=NLGN4Y;ID=stop_codon:NA12877_ch_T0001089;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	15123620	15443590	100	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_G0000357;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=NA12877_ch_T0001090;Name=NLGN4Y
NA12877_chrY	CAT	exon	15123620	15123772	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001090:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15123773	15221893	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001090:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15221894	15222464	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001090:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15221993	15222464	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001090:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	15221993	15221995	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=start_codon:NA12877_ch_T0001090;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15222465	15322985	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001090:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15322986	15323138	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001090:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15322986	15323138	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001090:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15323139	15424051	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001090:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15424052	15424237	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001090:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15424052	15424237	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001090:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15424238	15429593	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001090:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15429594	15430383	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001090:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15429594	15430383	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001090:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15430384	15440276	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001090:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15440277	15443590	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001090:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15440277	15441126	.	+	1	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001090:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	15441124	15441126	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=NA12877_ch_T0001090;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001090;transcript_name=NA12877_ch_T0001090;gene_name=NLGN4Y;ID=stop_codon:NA12877_ch_T0001090;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	15123620	15443590	100	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_G0000357;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=NA12877_ch_T0001091;Name=NLGN4Y
NA12877_chrY	CAT	exon	15123620	15123772	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001091:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15123773	15221893	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001091:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15221894	15222464	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001091:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15221993	15222464	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001091:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	15221993	15221995	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=start_codon:NA12877_ch_T0001091;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15222465	15319327	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001091:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15319328	15319387	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001091:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15319328	15319387	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001091:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15319388	15322985	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001091:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15322986	15323138	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001091:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15322986	15323138	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001091:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15323139	15348487	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001091:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15348488	15348598	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001091:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15348488	15348598	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001091:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15348599	15424051	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001091:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15424052	15424237	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001091:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15424052	15424237	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001091:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15424238	15429593	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001091:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15429594	15430383	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001091:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15429594	15430383	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001091:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15430384	15440276	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001091:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15440277	15443590	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001091:7;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15440277	15441126	.	+	1	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001091:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	15441124	15441126	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=NA12877_ch_T0001091;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001091;transcript_name=NA12877_ch_T0001091;gene_name=NLGN4Y;ID=stop_codon:NA12877_ch_T0001091;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	15123620	15443590	1000	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_G0000357;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=NA12877_ch_T0001092;Name=NLGN4Y
NA12877_chrY	CAT	exon	15123620	15123772	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001092:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15123773	15221893	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001092:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15221894	15222464	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001092:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15222465	15319327	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001092:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15319328	15319387	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001092:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15319388	15322985	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001092:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15322986	15323138	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001092:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15323139	15348487	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001092:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15348488	15348598	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001092:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15348599	15351549	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001092:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15351550	15351671	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001092:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15351672	15424051	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001092:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15424052	15424237	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001092:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15424238	15429593	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001092:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15429594	15430383	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001092:7;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15430384	15440276	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001092:7;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15440277	15443590	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=NA12877_ch_T0001092;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001092;transcript_name=NA12877_ch_T0001092;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001092:8;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	15123841	15222093	100	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=NA12877_ch_T0001093;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_G0000357;transcript_name=NA12877_ch_T0001093;gene_name=NLGN4Y;ID=NA12877_ch_T0001093;Name=NLGN4Y
NA12877_chrY	CAT	exon	15123841	15124158	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=NA12877_ch_T0001093;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001093;transcript_name=NA12877_ch_T0001093;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001093:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15124159	15221881	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=NA12877_ch_T0001093;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001093;transcript_name=NA12877_ch_T0001093;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001093:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15221882	15222093	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=NA12877_ch_T0001093;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001093;transcript_name=NA12877_ch_T0001093;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001093:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15221993	15222093	.	+	0	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=NA12877_ch_T0001093;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001093;transcript_name=NA12877_ch_T0001093;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001093:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	15221993	15221995	.	+	0	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=NA12877_ch_T0001093;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001093;transcript_name=NA12877_ch_T0001093;gene_name=NLGN4Y;ID=start_codon:NA12877_ch_T0001093;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	15124403	15445518	100	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_G0000357;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=NA12877_ch_T0001094;Name=NLGN4Y
NA12877_chrY	CAT	exon	15124403	15124582	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001094:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15124583	15221881	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001094:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15221882	15222464	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001094:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15221993	15222464	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001094:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	15221993	15221995	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=start_codon:NA12877_ch_T0001094;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15222465	15319327	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001094:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15319328	15319387	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001094:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15319328	15319387	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001094:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15319388	15322985	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001094:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15322986	15323138	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001094:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15322986	15323138	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001094:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15323139	15424051	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001094:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15424052	15424237	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001094:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15424052	15424237	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001094:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15424238	15429593	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001094:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15429594	15430383	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001094:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15429594	15430383	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001094:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15430384	15440276	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001094:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15440277	15445518	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001094:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15440277	15441126	.	+	1	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001094:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	15441124	15441126	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=NA12877_ch_T0001094;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001094;transcript_name=NA12877_ch_T0001094;gene_name=NLGN4Y;ID=stop_codon:NA12877_ch_T0001094;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	15124403	15222241	1000	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=NA12877_ch_T0001095;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_G0000357;transcript_name=NA12877_ch_T0001095;gene_name=NLGN4Y;ID=NA12877_ch_T0001095;Name=NLGN4Y
NA12877_chrY	CAT	exon	15124403	15124582	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=NA12877_ch_T0001095;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001095;transcript_name=NA12877_ch_T0001095;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001095:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15124583	15221881	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=NA12877_ch_T0001095;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001095;transcript_name=NA12877_ch_T0001095;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001095:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15221882	15222241	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=NA12877_ch_T0001095;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001095;transcript_name=NA12877_ch_T0001095;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001095:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	15124448	15443511	100	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_G0000357;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=NA12877_ch_T0001096;Name=NLGN4Y
NA12877_chrY	CAT	exon	15124448	15124810	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001096:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15124811	15221881	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001096:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15221882	15222464	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001096:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15221993	15222464	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001096:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	15221993	15221995	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=start_codon:NA12877_ch_T0001096;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15222465	15322985	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001096:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15322986	15323138	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001096:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15322986	15323138	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001096:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15323139	15424051	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001096:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15424052	15424237	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001096:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15424052	15424237	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001096:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15424238	15429593	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001096:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15429594	15430383	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001096:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15429594	15430383	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001096:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15430384	15440276	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001096:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15440277	15443511	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001096:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15440277	15441126	.	+	1	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001096:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	15441124	15441126	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=NA12877_ch_T0001096;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001096;transcript_name=NA12877_ch_T0001096;gene_name=NLGN4Y;ID=stop_codon:NA12877_ch_T0001096;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	15222054	15333418	100	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_G0000357;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=NA12877_ch_T0001097;Name=NLGN4Y
NA12877_chrY	CAT	exon	15222054	15222464	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001097;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001097:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15222054	15222464	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001097;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001097:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15222465	15319327	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001097;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001097:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15319328	15319387	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001097;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001097:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15319328	15319387	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001097;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001097:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15319388	15322985	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001097;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001097:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15322986	15323138	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001097;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001097:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15322986	15323138	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001097;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001097:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15323139	15333320	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001097;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=intron:NA12877_ch_T0001097:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15333321	15333418	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001097;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=exon:NA12877_ch_T0001097:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	15333321	15333406	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001097;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=CDS:NA12877_ch_T0001097:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	15333404	15333406	.	+	0	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=NA12877_ch_T0001097;gene_id=NA12877_ch_G0000357;Parent=NA12877_ch_T0001097;transcript_name=NA12877_ch_T0001097;gene_name=NLGN4Y;ID=stop_codon:NA12877_ch_T0001097;Name=NLGN4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	15238968	15240230	.	+	.	source_gene_common_name=AGKP1;source_gene=ENSG00000226555.1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;gene_id=NA12877_ch_G0000358;gene_biotype=processed_pseudogene;gene_name=AGKP1;gene_sources=liftoff;ID=NA12877_ch_G0000358;Name=AGKP1
NA12877_chrY	CAT	transcript	15238968	15240230	1000	+	.	source_transcript=ENST00000455254.1;source_transcript_name=AGKP1-201;source_gene=ENSG00000226555.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226555.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455254.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGKP1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;transcript_id=NA12877_ch_T0001098;gene_id=NA12877_ch_G0000358;Parent=NA12877_ch_G0000358;transcript_name=NA12877_ch_T0001098;gene_name=AGKP1;ID=NA12877_ch_T0001098;Name=AGKP1
NA12877_chrY	CAT	exon	15238968	15240230	.	+	.	source_transcript=ENST00000455254.1;source_transcript_name=AGKP1-201;source_gene=ENSG00000226555.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226555.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGKP1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;transcript_id=NA12877_ch_T0001098;gene_id=NA12877_ch_G0000358;Parent=NA12877_ch_T0001098;transcript_name=NA12877_ch_T0001098;gene_name=AGKP1;ID=exon:NA12877_ch_T0001098:0;Name=AGKP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	15393507	15403897	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=ENSG00000228787.1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;gene_id=NA12877_ch_G0000359;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=NA12877_ch_G0000359;Name=NLGN4Y-AS1
NA12877_chrY	CAT	transcript	15393507	15403897	1000	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=NA12877_ch_T0001099;gene_id=NA12877_ch_G0000359;Parent=NA12877_ch_G0000359;transcript_name=NA12877_ch_T0001099;gene_name=NLGN4Y-AS1;ID=NA12877_ch_T0001099;Name=NLGN4Y-AS1
NA12877_chrY	CAT	exon	15393507	15393852	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=NA12877_ch_T0001099;gene_id=NA12877_ch_G0000359;Parent=NA12877_ch_T0001099;transcript_name=NA12877_ch_T0001099;gene_name=NLGN4Y-AS1;ID=exon:NA12877_ch_T0001099:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15393853	15398486	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=NA12877_ch_T0001099;gene_id=NA12877_ch_G0000359;Parent=NA12877_ch_T0001099;transcript_name=NA12877_ch_T0001099;gene_name=NLGN4Y-AS1;ID=intron:NA12877_ch_T0001099:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15398487	15398574	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=NA12877_ch_T0001099;gene_id=NA12877_ch_G0000359;Parent=NA12877_ch_T0001099;transcript_name=NA12877_ch_T0001099;gene_name=NLGN4Y-AS1;ID=exon:NA12877_ch_T0001099:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15398575	15401140	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=NA12877_ch_T0001099;gene_id=NA12877_ch_G0000359;Parent=NA12877_ch_T0001099;transcript_name=NA12877_ch_T0001099;gene_name=NLGN4Y-AS1;ID=intron:NA12877_ch_T0001099:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15401141	15401209	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=NA12877_ch_T0001099;gene_id=NA12877_ch_G0000359;Parent=NA12877_ch_T0001099;transcript_name=NA12877_ch_T0001099;gene_name=NLGN4Y-AS1;ID=exon:NA12877_ch_T0001099:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15401210	15403868	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=NA12877_ch_T0001099;gene_id=NA12877_ch_G0000359;Parent=NA12877_ch_T0001099;transcript_name=NA12877_ch_T0001099;gene_name=NLGN4Y-AS1;ID=intron:NA12877_ch_T0001099:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15403869	15403897	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=NA12877_ch_T0001099;gene_id=NA12877_ch_G0000359;Parent=NA12877_ch_T0001099;transcript_name=NA12877_ch_T0001099;gene_name=NLGN4Y-AS1;ID=exon:NA12877_ch_T0001099:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	15507760	15507930	.	+	.	source_gene_common_name=MED13P1;source_gene=ENSG00000236131.1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;gene_id=NA12877_ch_G0000360;gene_biotype=processed_pseudogene;gene_name=MED13P1;gene_sources=liftoff;ID=NA12877_ch_G0000360;Name=MED13P1
NA12877_chrY	CAT	transcript	15507760	15507930	1000	+	.	source_transcript=ENST00000428342.1;source_transcript_name=MED13P1-201;source_gene=ENSG00000236131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428342.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428342.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED13P1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;transcript_id=NA12877_ch_T0001100;gene_id=NA12877_ch_G0000360;Parent=NA12877_ch_G0000360;transcript_name=NA12877_ch_T0001100;gene_name=MED13P1;ID=NA12877_ch_T0001100;Name=MED13P1
NA12877_chrY	CAT	exon	15507760	15507930	.	+	.	source_transcript=ENST00000428342.1;source_transcript_name=MED13P1-201;source_gene=ENSG00000236131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428342.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428342.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED13P1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;transcript_id=NA12877_ch_T0001100;gene_id=NA12877_ch_G0000360;Parent=NA12877_ch_T0001100;transcript_name=NA12877_ch_T0001100;gene_name=MED13P1;ID=exon:NA12877_ch_T0001100:0;Name=MED13P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	15525559	15526711	.	-	.	source_gene_common_name=ENSG00000304558;source_gene=ENSG00000304558.1;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;gene_id=NA12877_ch_G0000361;gene_biotype=lncRNA;gene_name=ENSG00000304558;gene_sources=liftoff;ID=NA12877_ch_G0000361;Name=ENSG00000304558
NA12877_chrY	CAT	transcript	15525559	15526711	1000	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=NA12877_ch_T0001101;gene_id=NA12877_ch_G0000361;Parent=NA12877_ch_G0000361;transcript_name=NA12877_ch_T0001101;gene_name=ENSG00000304558;ID=NA12877_ch_T0001101;Name=ENSG00000304558
NA12877_chrY	CAT	exon	15525559	15526437	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=NA12877_ch_T0001101;gene_id=NA12877_ch_G0000361;Parent=NA12877_ch_T0001101;transcript_name=NA12877_ch_T0001101;gene_name=ENSG00000304558;ID=exon:NA12877_ch_T0001101:0;Name=ENSG00000304558;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15526438	15526593	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=NA12877_ch_T0001101;gene_id=NA12877_ch_G0000361;Parent=NA12877_ch_T0001101;transcript_name=NA12877_ch_T0001101;gene_name=ENSG00000304558;ID=intron:NA12877_ch_T0001101:0;Name=ENSG00000304558;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15526594	15526711	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=NA12877_ch_T0001101;gene_id=NA12877_ch_G0000361;Parent=NA12877_ch_T0001101;transcript_name=NA12877_ch_T0001101;gene_name=ENSG00000304558;ID=exon:NA12877_ch_T0001101:1;Name=ENSG00000304558;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	15541408	15541611	.	-	.	source_gene_common_name=CYCSP46;source_gene=ENSG00000227949.1;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;gene_id=NA12877_ch_G0000362;gene_biotype=processed_pseudogene;gene_name=CYCSP46;gene_sources=liftoff;ID=NA12877_ch_G0000362;Name=CYCSP46
NA12877_chrY	CAT	transcript	15541408	15541611	1000	-	.	source_transcript=ENST00000423569.1;source_transcript_name=CYCSP46-201;source_gene=ENSG00000227949.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227949.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423569.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP46;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;transcript_id=NA12877_ch_T0001102;gene_id=NA12877_ch_G0000362;Parent=NA12877_ch_G0000362;transcript_name=NA12877_ch_T0001102;gene_name=CYCSP46;ID=NA12877_ch_T0001102;Name=CYCSP46
NA12877_chrY	CAT	exon	15541408	15541611	.	-	.	source_transcript=ENST00000423569.1;source_transcript_name=CYCSP46-201;source_gene=ENSG00000227949.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227949.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423569.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP46;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;transcript_id=NA12877_ch_T0001102;gene_id=NA12877_ch_G0000362;Parent=NA12877_ch_T0001102;transcript_name=NA12877_ch_T0001102;gene_name=CYCSP46;ID=exon:NA12877_ch_T0001102:0;Name=CYCSP46;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	15541607	15542576	.	+	.	source_gene_common_name=ENSG00000224518;source_gene=ENSG00000224518.2;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;gene_id=NA12877_ch_G0000363;gene_biotype=processed_pseudogene;gene_name=ENSG00000224518;gene_sources=liftoff;ID=NA12877_ch_G0000363;Name=ENSG00000224518
NA12877_chrY	CAT	transcript	15541607	15542576	1000	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=NA12877_ch_T0001103;gene_id=NA12877_ch_G0000363;Parent=NA12877_ch_G0000363;transcript_name=NA12877_ch_T0001103;gene_name=ENSG00000224518;ID=NA12877_ch_T0001103;Name=ENSG00000224518
NA12877_chrY	CAT	exon	15541607	15541682	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=NA12877_ch_T0001103;gene_id=NA12877_ch_G0000363;Parent=NA12877_ch_T0001103;transcript_name=NA12877_ch_T0001103;gene_name=ENSG00000224518;ID=exon:NA12877_ch_T0001103:0;Name=ENSG00000224518;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15541683	15542521	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=NA12877_ch_T0001103;gene_id=NA12877_ch_G0000363;Parent=NA12877_ch_T0001103;transcript_name=NA12877_ch_T0001103;gene_name=ENSG00000224518;ID=intron:NA12877_ch_T0001103:0;Name=ENSG00000224518;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15542522	15542576	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=NA12877_ch_T0001103;gene_id=NA12877_ch_G0000363;Parent=NA12877_ch_T0001103;transcript_name=NA12877_ch_T0001103;gene_name=ENSG00000224518;ID=exon:NA12877_ch_T0001103:1;Name=ENSG00000224518;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	15948504	16055915	.	-	.	source_gene_common_name=PUDPP1;source_gene=ENSG00000234620.1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;gene_id=NA12877_ch_G0000364;gene_biotype=unprocessed_pseudogene;gene_name=PUDPP1;gene_sources=liftoff;ID=NA12877_ch_G0000364;Name=PUDPP1
NA12877_chrY	CAT	transcript	15948504	16055915	1000	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=NA12877_ch_T0001104;gene_id=NA12877_ch_G0000364;Parent=NA12877_ch_G0000364;transcript_name=NA12877_ch_T0001104;gene_name=PUDPP1;ID=NA12877_ch_T0001104;Name=PUDPP1
NA12877_chrY	CAT	exon	15948504	15948708	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=NA12877_ch_T0001104;gene_id=NA12877_ch_G0000364;Parent=NA12877_ch_T0001104;transcript_name=NA12877_ch_T0001104;gene_name=PUDPP1;ID=exon:NA12877_ch_T0001104:0;Name=PUDPP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15948709	15981434	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=NA12877_ch_T0001104;gene_id=NA12877_ch_G0000364;Parent=NA12877_ch_T0001104;transcript_name=NA12877_ch_T0001104;gene_name=PUDPP1;ID=intron:NA12877_ch_T0001104:0;Name=PUDPP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	15981435	15981684	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=NA12877_ch_T0001104;gene_id=NA12877_ch_G0000364;Parent=NA12877_ch_T0001104;transcript_name=NA12877_ch_T0001104;gene_name=PUDPP1;ID=exon:NA12877_ch_T0001104:1;Name=PUDPP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	15981685	16055875	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=NA12877_ch_T0001104;gene_id=NA12877_ch_G0000364;Parent=NA12877_ch_T0001104;transcript_name=NA12877_ch_T0001104;gene_name=PUDPP1;ID=intron:NA12877_ch_T0001104:1;Name=PUDPP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16055876	16055915	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=NA12877_ch_T0001104;gene_id=NA12877_ch_G0000364;Parent=NA12877_ch_T0001104;transcript_name=NA12877_ch_T0001104;gene_name=PUDPP1;ID=exon:NA12877_ch_T0001104:2;Name=PUDPP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	16055848	16168982	.	+	.	source_gene_common_name=ENSG00000295583;source_gene=ENSG00000295583.1;gene_id=NA12877_ch_G0000365;gene_biotype=lncRNA;gene_name=ENSG00000295583;gene_sources=liftoff;ID=NA12877_ch_G0000365;Name=ENSG00000295583
NA12877_chrY	CAT	transcript	16055848	16166974	1000	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001105;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_G0000365;transcript_name=NA12877_ch_T0001105;gene_name=ENSG00000295583;ID=NA12877_ch_T0001105;Name=ENSG00000295583
NA12877_chrY	CAT	exon	16055848	16055909	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001105;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001105;transcript_name=NA12877_ch_T0001105;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001105:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16055910	16060134	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001105;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001105;transcript_name=NA12877_ch_T0001105;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001105:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16060135	16060216	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001105;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001105;transcript_name=NA12877_ch_T0001105;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001105:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16060217	16147056	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001105;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001105;transcript_name=NA12877_ch_T0001105;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001105:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16147057	16147197	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001105;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001105;transcript_name=NA12877_ch_T0001105;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001105:2;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16147198	16149449	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001105;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001105;transcript_name=NA12877_ch_T0001105;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001105:2;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16149450	16149571	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001105;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001105;transcript_name=NA12877_ch_T0001105;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001105:3;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16149572	16166604	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001105;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001105;transcript_name=NA12877_ch_T0001105;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001105:3;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16166605	16166974	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001105;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001105;transcript_name=NA12877_ch_T0001105;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001105:4;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	16055854	16168982	1000	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001106;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_G0000365;transcript_name=NA12877_ch_T0001106;gene_name=ENSG00000295583;ID=NA12877_ch_T0001106;Name=ENSG00000295583
NA12877_chrY	CAT	exon	16055854	16055909	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001106;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001106;transcript_name=NA12877_ch_T0001106;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001106:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16055910	16060134	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001106;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001106;transcript_name=NA12877_ch_T0001106;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001106:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16060135	16060216	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001106;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001106;transcript_name=NA12877_ch_T0001106;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001106:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16060217	16147056	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001106;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001106;transcript_name=NA12877_ch_T0001106;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001106:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16147057	16147197	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001106;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001106;transcript_name=NA12877_ch_T0001106;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001106:2;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16147198	16149449	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001106;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001106;transcript_name=NA12877_ch_T0001106;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001106:2;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16149450	16149571	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001106;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001106;transcript_name=NA12877_ch_T0001106;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001106:3;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16149572	16166604	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001106;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001106;transcript_name=NA12877_ch_T0001106;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001106:3;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16166605	16166741	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001106;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001106;transcript_name=NA12877_ch_T0001106;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001106:4;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16166742	16168865	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001106;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001106;transcript_name=NA12877_ch_T0001106;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001106:4;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16168866	16168982	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001106;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001106;transcript_name=NA12877_ch_T0001106;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001106:5;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	16055873	16061524	1000	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001107;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_G0000365;transcript_name=NA12877_ch_T0001107;gene_name=ENSG00000295583;ID=NA12877_ch_T0001107;Name=ENSG00000295583
NA12877_chrY	CAT	exon	16055873	16055909	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001107;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001107;transcript_name=NA12877_ch_T0001107;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001107:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16055910	16060134	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001107;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001107;transcript_name=NA12877_ch_T0001107;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001107:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16060135	16060216	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001107;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001107;transcript_name=NA12877_ch_T0001107;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001107:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16060217	16060539	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001107;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001107;transcript_name=NA12877_ch_T0001107;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001107:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16060540	16061524	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001107;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001107;transcript_name=NA12877_ch_T0001107;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001107:2;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	16055881	16060349	1000	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001108;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_G0000365;transcript_name=NA12877_ch_T0001108;gene_name=ENSG00000295583;ID=NA12877_ch_T0001108;Name=ENSG00000295583
NA12877_chrY	CAT	exon	16055881	16056681	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001108;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001108;transcript_name=NA12877_ch_T0001108;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001108:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16056682	16060134	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001108;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001108;transcript_name=NA12877_ch_T0001108;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001108:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16060135	16060349	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001108;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001108;transcript_name=NA12877_ch_T0001108;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001108:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	16056046	16061524	1000	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001109;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_G0000365;transcript_name=NA12877_ch_T0001109;gene_name=ENSG00000295583;ID=NA12877_ch_T0001109;Name=ENSG00000295583
NA12877_chrY	CAT	exon	16056046	16056681	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001109;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001109;transcript_name=NA12877_ch_T0001109;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001109:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16056682	16060134	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001109;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001109;transcript_name=NA12877_ch_T0001109;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001109:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16060135	16060216	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001109;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001109;transcript_name=NA12877_ch_T0001109;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001109:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16060217	16060539	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001109;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001109;transcript_name=NA12877_ch_T0001109;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001109:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16060540	16061524	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001109;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001109;transcript_name=NA12877_ch_T0001109;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001109:2;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	16056176	16060676	1000	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001110;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_G0000365;transcript_name=NA12877_ch_T0001110;gene_name=ENSG00000295583;ID=NA12877_ch_T0001110;Name=ENSG00000295583
NA12877_chrY	CAT	exon	16056176	16056325	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001110;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001110;transcript_name=NA12877_ch_T0001110;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001110:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16056326	16060134	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001110;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001110;transcript_name=NA12877_ch_T0001110;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001110:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16060135	16060216	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001110;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001110;transcript_name=NA12877_ch_T0001110;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001110:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16060217	16060539	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001110;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001110;transcript_name=NA12877_ch_T0001110;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001110:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16060540	16060676	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001110;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001110;transcript_name=NA12877_ch_T0001110;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001110:2;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	16056176	16057219	1000	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001111;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_G0000365;transcript_name=NA12877_ch_T0001111;gene_name=ENSG00000295583;ID=NA12877_ch_T0001111;Name=ENSG00000295583
NA12877_chrY	CAT	exon	16056176	16056681	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001111;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001111;transcript_name=NA12877_ch_T0001111;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001111:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16056682	16056765	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001111;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001111;transcript_name=NA12877_ch_T0001111;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001111:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16056766	16057219	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001111;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001111;transcript_name=NA12877_ch_T0001111;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001111:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	16056180	16060349	1000	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001112;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_G0000365;transcript_name=NA12877_ch_T0001112;gene_name=ENSG00000295583;ID=NA12877_ch_T0001112;Name=ENSG00000295583
NA12877_chrY	CAT	exon	16056180	16056681	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001112;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001112;transcript_name=NA12877_ch_T0001112;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001112:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16056682	16059804	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001112;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001112;transcript_name=NA12877_ch_T0001112;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001112:0;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16059805	16059924	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001112;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001112;transcript_name=NA12877_ch_T0001112;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001112:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16059925	16060134	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001112;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001112;transcript_name=NA12877_ch_T0001112;gene_name=ENSG00000295583;ID=intron:NA12877_ch_T0001112:1;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16060135	16060349	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=NA12877_ch_T0001112;gene_id=NA12877_ch_G0000365;Parent=NA12877_ch_T0001112;transcript_name=NA12877_ch_T0001112;gene_name=ENSG00000295583;ID=exon:NA12877_ch_T0001112:2;Name=ENSG00000295583;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	16147055	16193164	.	+	.	source_gene_common_name=STSP1;source_gene=ENSG00000227166.1;gene_id=NA12877_ch_G0000366;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=STSP1;gene_sources=liftoff;ID=NA12877_ch_G0000366;Name=STSP1
NA12877_chrY	CAT	transcript	16147055	16193164	1000	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=NA12877_ch_T0001113;gene_id=NA12877_ch_G0000366;Parent=NA12877_ch_G0000366;transcript_name=NA12877_ch_T0001113;gene_name=STSP1;ID=NA12877_ch_T0001113;Name=STSP1
NA12877_chrY	CAT	exon	16147055	16147197	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=NA12877_ch_T0001113;gene_id=NA12877_ch_G0000366;Parent=NA12877_ch_T0001113;transcript_name=NA12877_ch_T0001113;gene_name=STSP1;ID=exon:NA12877_ch_T0001113:0;Name=STSP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16147198	16149449	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=NA12877_ch_T0001113;gene_id=NA12877_ch_G0000366;Parent=NA12877_ch_T0001113;transcript_name=NA12877_ch_T0001113;gene_name=STSP1;ID=intron:NA12877_ch_T0001113:0;Name=STSP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16149450	16149780	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=NA12877_ch_T0001113;gene_id=NA12877_ch_G0000366;Parent=NA12877_ch_T0001113;transcript_name=NA12877_ch_T0001113;gene_name=STSP1;ID=exon:NA12877_ch_T0001113:1;Name=STSP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16149781	16151429	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=NA12877_ch_T0001113;gene_id=NA12877_ch_G0000366;Parent=NA12877_ch_T0001113;transcript_name=NA12877_ch_T0001113;gene_name=STSP1;ID=intron:NA12877_ch_T0001113:1;Name=STSP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16151430	16151848	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=NA12877_ch_T0001113;gene_id=NA12877_ch_G0000366;Parent=NA12877_ch_T0001113;transcript_name=NA12877_ch_T0001113;gene_name=STSP1;ID=exon:NA12877_ch_T0001113:2;Name=STSP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16151849	16166604	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=NA12877_ch_T0001113;gene_id=NA12877_ch_G0000366;Parent=NA12877_ch_T0001113;transcript_name=NA12877_ch_T0001113;gene_name=STSP1;ID=intron:NA12877_ch_T0001113:2;Name=STSP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16166605	16166761	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=NA12877_ch_T0001113;gene_id=NA12877_ch_G0000366;Parent=NA12877_ch_T0001113;transcript_name=NA12877_ch_T0001113;gene_name=STSP1;ID=exon:NA12877_ch_T0001113:3;Name=STSP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16166762	16193063	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=NA12877_ch_T0001113;gene_id=NA12877_ch_G0000366;Parent=NA12877_ch_T0001113;transcript_name=NA12877_ch_T0001113;gene_name=STSP1;ID=intron:NA12877_ch_T0001113:3;Name=STSP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16193064	16193164	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=NA12877_ch_T0001113;gene_id=NA12877_ch_G0000366;Parent=NA12877_ch_T0001113;transcript_name=NA12877_ch_T0001113;gene_name=STSP1;ID=exon:NA12877_ch_T0001113:4;Name=STSP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	16290202	16298123	.	-	.	source_gene_common_name=ENSG00000295335;source_gene=ENSG00000295335.1;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;gene_id=NA12877_ch_G0000367;gene_biotype=lncRNA;gene_name=ENSG00000295335;gene_sources=liftoff;ID=NA12877_ch_G0000367;Name=ENSG00000295335
NA12877_chrY	CAT	transcript	16290202	16298123	1000	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=NA12877_ch_T0001114;gene_id=NA12877_ch_G0000367;Parent=NA12877_ch_G0000367;transcript_name=NA12877_ch_T0001114;gene_name=ENSG00000295335;ID=NA12877_ch_T0001114;Name=ENSG00000295335
NA12877_chrY	CAT	exon	16290202	16290556	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=NA12877_ch_T0001114;gene_id=NA12877_ch_G0000367;Parent=NA12877_ch_T0001114;transcript_name=NA12877_ch_T0001114;gene_name=ENSG00000295335;ID=exon:NA12877_ch_T0001114:0;Name=ENSG00000295335;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16290557	16298079	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=NA12877_ch_T0001114;gene_id=NA12877_ch_G0000367;Parent=NA12877_ch_T0001114;transcript_name=NA12877_ch_T0001114;gene_name=ENSG00000295335;ID=intron:NA12877_ch_T0001114:0;Name=ENSG00000295335;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16298080	16298123	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=NA12877_ch_T0001114;gene_id=NA12877_ch_G0000367;Parent=NA12877_ch_T0001114;transcript_name=NA12877_ch_T0001114;gene_name=ENSG00000295335;ID=exon:NA12877_ch_T0001114:1;Name=ENSG00000295335;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	16657877	16724767	.	-	.	source_gene_common_name=ENSG00000300212;source_gene=ENSG00000300212.1;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;gene_id=NA12877_ch_G0000368;gene_biotype=lncRNA;gene_name=ENSG00000300212;gene_sources=liftoff;ID=NA12877_ch_G0000368;Name=ENSG00000300212
NA12877_chrY	CAT	transcript	16657877	16724767	1000	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=NA12877_ch_T0001115;gene_id=NA12877_ch_G0000368;Parent=NA12877_ch_G0000368;transcript_name=NA12877_ch_T0001115;gene_name=ENSG00000300212;ID=NA12877_ch_T0001115;Name=ENSG00000300212
NA12877_chrY	CAT	exon	16657877	16658574	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=NA12877_ch_T0001115;gene_id=NA12877_ch_G0000368;Parent=NA12877_ch_T0001115;transcript_name=NA12877_ch_T0001115;gene_name=ENSG00000300212;ID=exon:NA12877_ch_T0001115:0;Name=ENSG00000300212;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16658575	16722406	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=NA12877_ch_T0001115;gene_id=NA12877_ch_G0000368;Parent=NA12877_ch_T0001115;transcript_name=NA12877_ch_T0001115;gene_name=ENSG00000300212;ID=intron:NA12877_ch_T0001115:0;Name=ENSG00000300212;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16722407	16722551	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=NA12877_ch_T0001115;gene_id=NA12877_ch_G0000368;Parent=NA12877_ch_T0001115;transcript_name=NA12877_ch_T0001115;gene_name=ENSG00000300212;ID=exon:NA12877_ch_T0001115:1;Name=ENSG00000300212;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16722552	16724092	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=NA12877_ch_T0001115;gene_id=NA12877_ch_G0000368;Parent=NA12877_ch_T0001115;transcript_name=NA12877_ch_T0001115;gene_name=ENSG00000300212;ID=intron:NA12877_ch_T0001115:1;Name=ENSG00000300212;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16724093	16724272	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=NA12877_ch_T0001115;gene_id=NA12877_ch_G0000368;Parent=NA12877_ch_T0001115;transcript_name=NA12877_ch_T0001115;gene_name=ENSG00000300212;ID=exon:NA12877_ch_T0001115:2;Name=ENSG00000300212;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16724273	16724492	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=NA12877_ch_T0001115;gene_id=NA12877_ch_G0000368;Parent=NA12877_ch_T0001115;transcript_name=NA12877_ch_T0001115;gene_name=ENSG00000300212;ID=intron:NA12877_ch_T0001115:2;Name=ENSG00000300212;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16724493	16724767	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=NA12877_ch_T0001115;gene_id=NA12877_ch_G0000368;Parent=NA12877_ch_T0001115;transcript_name=NA12877_ch_T0001115;gene_name=ENSG00000300212;ID=exon:NA12877_ch_T0001115:3;Name=ENSG00000300212;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	16738209	16738340	.	-	.	source_gene_common_name=ENSG00000252689;source_gene=ENSG00000252689.1;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;gene_id=NA12877_ch_G0000369;gene_biotype=snoRNA;gene_name=ENSG00000252689;gene_sources=liftoff;ID=NA12877_ch_G0000369;Name=ENSG00000252689
NA12877_chrY	CAT	transcript	16738209	16738340	1000	-	.	source_transcript=ENST00000516880.1;source_transcript_name=ENST00000516880;source_gene=ENSG00000252689.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000252689.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516880.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516880.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000252689;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;transcript_id=NA12877_ch_T0001116;gene_id=NA12877_ch_G0000369;Parent=NA12877_ch_G0000369;transcript_name=NA12877_ch_T0001116;gene_name=ENSG00000252689;ID=NA12877_ch_T0001116;Name=ENSG00000252689
NA12877_chrY	CAT	exon	16738209	16738340	.	-	.	source_transcript=ENST00000516880.1;source_transcript_name=ENST00000516880;source_gene=ENSG00000252689.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000252689.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516880.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516880.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000252689;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;transcript_id=NA12877_ch_T0001116;gene_id=NA12877_ch_G0000369;Parent=NA12877_ch_T0001116;transcript_name=NA12877_ch_T0001116;gene_name=ENSG00000252689;ID=exon:NA12877_ch_T0001116:0;Name=ENSG00000252689;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	16786101	16791260	.	+	.	source_gene_common_name=ENSG00000309341;source_gene=ENSG00000309341.1;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;gene_id=NA12877_ch_G0000370;gene_biotype=lncRNA;gene_name=ENSG00000309341;gene_sources=liftoff;ID=NA12877_ch_G0000370;Name=ENSG00000309341
NA12877_chrY	CAT	transcript	16786101	16791260	1000	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=NA12877_ch_T0001117;gene_id=NA12877_ch_G0000370;Parent=NA12877_ch_G0000370;transcript_name=NA12877_ch_T0001117;gene_name=ENSG00000309341;ID=NA12877_ch_T0001117;Name=ENSG00000309341
NA12877_chrY	CAT	exon	16786101	16786256	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=NA12877_ch_T0001117;gene_id=NA12877_ch_G0000370;Parent=NA12877_ch_T0001117;transcript_name=NA12877_ch_T0001117;gene_name=ENSG00000309341;ID=exon:NA12877_ch_T0001117:0;Name=ENSG00000309341;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16786257	16791085	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=NA12877_ch_T0001117;gene_id=NA12877_ch_G0000370;Parent=NA12877_ch_T0001117;transcript_name=NA12877_ch_T0001117;gene_name=ENSG00000309341;ID=intron:NA12877_ch_T0001117:0;Name=ENSG00000309341;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16791086	16791260	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=NA12877_ch_T0001117;gene_id=NA12877_ch_G0000370;Parent=NA12877_ch_T0001117;transcript_name=NA12877_ch_T0001117;gene_name=ENSG00000309341;ID=exon:NA12877_ch_T0001117:1;Name=ENSG00000309341;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	16848892	16848998	.	+	.	source_gene_common_name=RNU6-109P;source_gene=ENSG00000252173.1;alternative_source_transcripts=ENST00000516364.1,ENST00000516364.1;gene_id=NA12877_ch_G0000371;gene_biotype=snRNA;gene_name=RNU6-109P;gene_sources=liftoff;ID=NA12877_ch_G0000371;Name=RNU6-109P
NA12877_chrY	CAT	transcript	16848892	16848998	1000	+	.	source_transcript=ENST00000516364.1;source_transcript_name=RNU6-109P-201;source_gene=ENSG00000252173.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252173.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516364.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-109P;alternative_source_transcripts=ENST00000516364.1,ENST00000516364.1;transcript_id=NA12877_ch_T0001118;gene_id=NA12877_ch_G0000371;Parent=NA12877_ch_G0000371;transcript_name=NA12877_ch_T0001118;gene_name=RNU6-109P;ID=NA12877_ch_T0001118;Name=RNU6-109P
NA12877_chrY	CAT	exon	16848892	16848998	.	+	.	source_transcript=ENST00000516364.1;source_transcript_name=RNU6-109P-201;source_gene=ENSG00000252173.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252173.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516364.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-109P;alternative_source_transcripts=ENST00000516364.1,ENST00000516364.1;transcript_id=NA12877_ch_T0001118;gene_id=NA12877_ch_G0000371;Parent=NA12877_ch_T0001118;transcript_name=NA12877_ch_T0001118;gene_name=RNU6-109P;ID=exon:NA12877_ch_T0001118:0;Name=RNU6-109P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	16936245	16936351	.	-	.	source_gene_common_name=RNU6-184P;source_gene=ENSG00000252323.1;alternative_source_transcripts=ENST00000516514.1,ENST00000516514.1;gene_id=NA12877_ch_G0000372;gene_biotype=snRNA;gene_name=RNU6-184P;gene_sources=liftoff;ID=NA12877_ch_G0000372;Name=RNU6-184P
NA12877_chrY	CAT	transcript	16936245	16936351	1000	-	.	source_transcript=ENST00000516514.1;source_transcript_name=RNU6-184P-201;source_gene=ENSG00000252323.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252323.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516514.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-184P;alternative_source_transcripts=ENST00000516514.1,ENST00000516514.1;transcript_id=NA12877_ch_T0001119;gene_id=NA12877_ch_G0000372;Parent=NA12877_ch_G0000372;transcript_name=NA12877_ch_T0001119;gene_name=RNU6-184P;ID=NA12877_ch_T0001119;Name=RNU6-184P
NA12877_chrY	CAT	exon	16936245	16936351	.	-	.	source_transcript=ENST00000516514.1;source_transcript_name=RNU6-184P-201;source_gene=ENSG00000252323.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252323.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516514.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-184P;alternative_source_transcripts=ENST00000516514.1,ENST00000516514.1;transcript_id=NA12877_ch_T0001119;gene_id=NA12877_ch_G0000372;Parent=NA12877_ch_T0001119;transcript_name=NA12877_ch_T0001119;gene_name=RNU6-184P;ID=exon:NA12877_ch_T0001119:0;Name=RNU6-184P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	16993994	16999153	.	-	.	source_gene_common_name=ENSG00000309341;source_gene=ENSG00000309341.1;gene_id=NA12877_ch_G0000373;gene_biotype=lncRNA;gene_name=ENSG00000309341;gene_sources=liftoff;ID=NA12877_ch_G0000373;Name=ENSG00000309341
NA12877_chrY	CAT	transcript	16993994	16999153	1000	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=NA12877_ch_T0001120;gene_id=NA12877_ch_G0000373;Parent=NA12877_ch_G0000373;transcript_name=NA12877_ch_T0001120;gene_name=ENSG00000309341;ID=NA12877_ch_T0001120;Name=ENSG00000309341
NA12877_chrY	CAT	exon	16993994	16994168	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=NA12877_ch_T0001120;gene_id=NA12877_ch_G0000373;Parent=NA12877_ch_T0001120;transcript_name=NA12877_ch_T0001120;gene_name=ENSG00000309341;ID=exon:NA12877_ch_T0001120:0;Name=ENSG00000309341;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	16994169	16998997	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=NA12877_ch_T0001120;gene_id=NA12877_ch_G0000373;Parent=NA12877_ch_T0001120;transcript_name=NA12877_ch_T0001120;gene_name=ENSG00000309341;ID=intron:NA12877_ch_T0001120:0;Name=ENSG00000309341;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	16998998	16999153	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=NA12877_ch_T0001120;gene_id=NA12877_ch_G0000373;Parent=NA12877_ch_T0001120;transcript_name=NA12877_ch_T0001120;gene_name=ENSG00000309341;ID=exon:NA12877_ch_T0001120:1;Name=ENSG00000309341;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	17199681	17244482	.	-	.	source_gene_common_name=ENSG00000286201;source_gene=ENSG00000286201.2;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;gene_id=NA12877_ch_G0000374;gene_biotype=lncRNA;gene_name=ENSG00000286201;gene_sources=liftoff;ID=NA12877_ch_G0000374;Name=ENSG00000286201
NA12877_chrY	CAT	transcript	17199681	17244482	1000	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=NA12877_ch_T0001121;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_G0000374;transcript_name=NA12877_ch_T0001121;gene_name=ENSG00000286201;ID=NA12877_ch_T0001121;Name=ENSG00000286201
NA12877_chrY	CAT	exon	17199681	17205794	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=NA12877_ch_T0001121;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_T0001121;transcript_name=NA12877_ch_T0001121;gene_name=ENSG00000286201;ID=exon:NA12877_ch_T0001121:0;Name=ENSG00000286201;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	17205795	17228480	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=NA12877_ch_T0001121;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_T0001121;transcript_name=NA12877_ch_T0001121;gene_name=ENSG00000286201;ID=intron:NA12877_ch_T0001121:0;Name=ENSG00000286201;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	17228481	17228523	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=NA12877_ch_T0001121;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_T0001121;transcript_name=NA12877_ch_T0001121;gene_name=ENSG00000286201;ID=exon:NA12877_ch_T0001121:1;Name=ENSG00000286201;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	17228524	17243986	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=NA12877_ch_T0001121;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_T0001121;transcript_name=NA12877_ch_T0001121;gene_name=ENSG00000286201;ID=intron:NA12877_ch_T0001121:1;Name=ENSG00000286201;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	17243987	17244482	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=NA12877_ch_T0001121;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_T0001121;transcript_name=NA12877_ch_T0001121;gene_name=ENSG00000286201;ID=exon:NA12877_ch_T0001121:2;Name=ENSG00000286201;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	17201090	17228630	1000	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=NA12877_ch_T0001122;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_G0000374;transcript_name=NA12877_ch_T0001122;gene_name=ENSG00000286201;ID=NA12877_ch_T0001122;Name=ENSG00000286201
NA12877_chrY	CAT	exon	17201090	17201535	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=NA12877_ch_T0001122;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_T0001122;transcript_name=NA12877_ch_T0001122;gene_name=ENSG00000286201;ID=exon:NA12877_ch_T0001122:0;Name=ENSG00000286201;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	17201536	17205677	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=NA12877_ch_T0001122;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_T0001122;transcript_name=NA12877_ch_T0001122;gene_name=ENSG00000286201;ID=intron:NA12877_ch_T0001122:0;Name=ENSG00000286201;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	17205678	17205794	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=NA12877_ch_T0001122;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_T0001122;transcript_name=NA12877_ch_T0001122;gene_name=ENSG00000286201;ID=exon:NA12877_ch_T0001122:1;Name=ENSG00000286201;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	17205795	17219413	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=NA12877_ch_T0001122;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_T0001122;transcript_name=NA12877_ch_T0001122;gene_name=ENSG00000286201;ID=intron:NA12877_ch_T0001122:1;Name=ENSG00000286201;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	17219414	17219505	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=NA12877_ch_T0001122;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_T0001122;transcript_name=NA12877_ch_T0001122;gene_name=ENSG00000286201;ID=exon:NA12877_ch_T0001122:2;Name=ENSG00000286201;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	17219506	17228480	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=NA12877_ch_T0001122;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_T0001122;transcript_name=NA12877_ch_T0001122;gene_name=ENSG00000286201;ID=intron:NA12877_ch_T0001122:2;Name=ENSG00000286201;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	17228481	17228630	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=NA12877_ch_T0001122;gene_id=NA12877_ch_G0000374;Parent=NA12877_ch_T0001122;transcript_name=NA12877_ch_T0001122;gene_name=ENSG00000286201;ID=exon:NA12877_ch_T0001122:3;Name=ENSG00000286201;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	17792756	17793582	.	+	.	source_gene_common_name=SURF6P1;source_gene=ENSG00000228518.1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;gene_id=NA12877_ch_G0000375;gene_biotype=processed_pseudogene;gene_name=SURF6P1;gene_sources=liftoff;ID=NA12877_ch_G0000375;Name=SURF6P1
NA12877_chrY	CAT	transcript	17792756	17793582	1000	+	.	source_transcript=ENST00000451854.1;source_transcript_name=SURF6P1-201;source_gene=ENSG00000228518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451854.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451854.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SURF6P1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;transcript_id=NA12877_ch_T0001123;gene_id=NA12877_ch_G0000375;Parent=NA12877_ch_G0000375;transcript_name=NA12877_ch_T0001123;gene_name=SURF6P1;ID=NA12877_ch_T0001123;Name=SURF6P1
NA12877_chrY	CAT	exon	17792756	17793582	.	+	.	source_transcript=ENST00000451854.1;source_transcript_name=SURF6P1-201;source_gene=ENSG00000228518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451854.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451854.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SURF6P1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;transcript_id=NA12877_ch_T0001123;gene_id=NA12877_ch_G0000375;Parent=NA12877_ch_T0001123;transcript_name=NA12877_ch_T0001123;gene_name=SURF6P1;ID=exon:NA12877_ch_T0001123:0;Name=SURF6P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18064796	18065131	.	-	.	source_gene_common_name=ELOCP35;source_gene=ENSG00000271595.1;alternative_source_transcripts=ENST00000604289.1;gene_id=NA12877_ch_G0000376;gene_biotype=processed_pseudogene;gene_name=ELOCP35;gene_sources=liftoff;ID=NA12877_ch_G0000376;Name=ELOCP35
NA12877_chrY	CAT	transcript	18064796	18065131	1000	-	.	source_transcript=ENST00000604289.1;source_transcript_name=ELOCP35-201;source_gene=ENSG00000271595.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271595.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604289.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP35;alternative_source_transcripts=ENST00000604289.1;transcript_id=NA12877_ch_T0001124;gene_id=NA12877_ch_G0000376;Parent=NA12877_ch_G0000376;transcript_name=NA12877_ch_T0001124;gene_name=ELOCP35;ID=NA12877_ch_T0001124;Name=ELOCP35
NA12877_chrY	CAT	exon	18064796	18065131	.	-	.	source_transcript=ENST00000604289.1;source_transcript_name=ELOCP35-201;source_gene=ENSG00000271595.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271595.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604289.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP35;alternative_source_transcripts=ENST00000604289.1;transcript_id=NA12877_ch_T0001124;gene_id=NA12877_ch_G0000376;Parent=NA12877_ch_T0001124;transcript_name=NA12877_ch_T0001124;gene_name=ELOCP35;ID=exon:NA12877_ch_T0001124:0;Name=ELOCP35;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18100875	18114935	.	+	.	source_gene_common_name=FAM41AY1;source_gene=ENSG00000224989.2;alternative_source_transcripts=ENST00000421205.2;gene_id=NA12877_ch_G0000377;gene_biotype=lncRNA;gene_name=FAM41AY1;gene_sources=liftoff;ID=NA12877_ch_G0000377;Name=FAM41AY1
NA12877_chrY	CAT	transcript	18100875	18114935	1000	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_G0000377;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=NA12877_ch_T0001125;Name=FAM41AY1
NA12877_chrY	CAT	exon	18100875	18101032	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=exon:NA12877_ch_T0001125:0;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18101033	18101627	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=intron:NA12877_ch_T0001125:0;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18101628	18101677	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=exon:NA12877_ch_T0001125:1;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18101678	18113014	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=intron:NA12877_ch_T0001125:1;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18113015	18113143	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=exon:NA12877_ch_T0001125:2;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18113144	18113390	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=intron:NA12877_ch_T0001125:2;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18113391	18113484	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=exon:NA12877_ch_T0001125:3;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18113485	18114077	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=intron:NA12877_ch_T0001125:3;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18114078	18114248	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=exon:NA12877_ch_T0001125:4;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18114249	18114357	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=intron:NA12877_ch_T0001125:4;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18114358	18114451	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=exon:NA12877_ch_T0001125:5;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18114452	18114725	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=intron:NA12877_ch_T0001125:5;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18114726	18114935	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=ENST00000421205.2;transcript_id=NA12877_ch_T0001125;gene_id=NA12877_ch_G0000377;Parent=NA12877_ch_T0001125;transcript_name=NA12877_ch_T0001125;gene_name=FAM41AY1;ID=exon:NA12877_ch_T0001125:6;Name=FAM41AY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18114419	18116632	.	+	.	source_gene_common_name=ENSG00000283076;source_gene=ENSG00000283076.1;gene_id=NA12877_ch_G0000378;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000283076;gene_sources=liftoff;ID=NA12877_ch_G0000378;Name=ENSG00000283076
NA12877_chrY	CAT	transcript	18114419	18116632	1000	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=NA12877_ch_T0001126;gene_id=NA12877_ch_G0000378;Parent=NA12877_ch_G0000378;transcript_name=NA12877_ch_T0001126;gene_name=ENSG00000283076;ID=NA12877_ch_T0001126;Name=ENSG00000283076
NA12877_chrY	CAT	exon	18114419	18114627	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=NA12877_ch_T0001126;gene_id=NA12877_ch_G0000378;Parent=NA12877_ch_T0001126;transcript_name=NA12877_ch_T0001126;gene_name=ENSG00000283076;ID=exon:NA12877_ch_T0001126:0;Name=ENSG00000283076;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18114628	18114672	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=NA12877_ch_T0001126;gene_id=NA12877_ch_G0000378;Parent=NA12877_ch_T0001126;transcript_name=NA12877_ch_T0001126;gene_name=ENSG00000283076;ID=intron:NA12877_ch_T0001126:0;Name=ENSG00000283076;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18114673	18114935	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=NA12877_ch_T0001126;gene_id=NA12877_ch_G0000378;Parent=NA12877_ch_T0001126;transcript_name=NA12877_ch_T0001126;gene_name=ENSG00000283076;ID=exon:NA12877_ch_T0001126:1;Name=ENSG00000283076;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18114936	18115065	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=NA12877_ch_T0001126;gene_id=NA12877_ch_G0000378;Parent=NA12877_ch_T0001126;transcript_name=NA12877_ch_T0001126;gene_name=ENSG00000283076;ID=intron:NA12877_ch_T0001126:1;Name=ENSG00000283076;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18115066	18115144	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=NA12877_ch_T0001126;gene_id=NA12877_ch_G0000378;Parent=NA12877_ch_T0001126;transcript_name=NA12877_ch_T0001126;gene_name=ENSG00000283076;ID=exon:NA12877_ch_T0001126:2;Name=ENSG00000283076;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18115145	18115469	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=NA12877_ch_T0001126;gene_id=NA12877_ch_G0000378;Parent=NA12877_ch_T0001126;transcript_name=NA12877_ch_T0001126;gene_name=ENSG00000283076;ID=intron:NA12877_ch_T0001126:2;Name=ENSG00000283076;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18115470	18115564	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=NA12877_ch_T0001126;gene_id=NA12877_ch_G0000378;Parent=NA12877_ch_T0001126;transcript_name=NA12877_ch_T0001126;gene_name=ENSG00000283076;ID=exon:NA12877_ch_T0001126:3;Name=ENSG00000283076;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18115565	18115932	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=NA12877_ch_T0001126;gene_id=NA12877_ch_G0000378;Parent=NA12877_ch_T0001126;transcript_name=NA12877_ch_T0001126;gene_name=ENSG00000283076;ID=intron:NA12877_ch_T0001126:3;Name=ENSG00000283076;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18115933	18116049	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=NA12877_ch_T0001126;gene_id=NA12877_ch_G0000378;Parent=NA12877_ch_T0001126;transcript_name=NA12877_ch_T0001126;gene_name=ENSG00000283076;ID=exon:NA12877_ch_T0001126:4;Name=ENSG00000283076;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18116050	18116505	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=NA12877_ch_T0001126;gene_id=NA12877_ch_G0000378;Parent=NA12877_ch_T0001126;transcript_name=NA12877_ch_T0001126;gene_name=ENSG00000283076;ID=intron:NA12877_ch_T0001126:4;Name=ENSG00000283076;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18116506	18116632	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=NA12877_ch_T0001126;gene_id=NA12877_ch_G0000378;Parent=NA12877_ch_T0001126;transcript_name=NA12877_ch_T0001126;gene_name=ENSG00000283076;ID=exon:NA12877_ch_T0001126:5;Name=ENSG00000283076;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18116753	18118955	.	-	.	source_gene_common_name=TUBB1P2;source_gene=ENSG00000228578.1;gene_id=NA12877_ch_G0000379;gene_biotype=unprocessed_pseudogene;gene_name=TUBB1P2;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000379;Name=TUBB1P2
NA12877_chrY	CAT	transcript	18116753	18118955	1000	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001127;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_G0000379;transcript_name=NA12877_ch_T0001127;gene_name=TUBB1P2;ID=NA12877_ch_T0001127;Name=TUBB1P2
NA12877_chrY	CAT	exon	18116753	18117801	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001127;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_T0001127;transcript_name=NA12877_ch_T0001127;gene_name=TUBB1P2;ID=exon:NA12877_ch_T0001127:0;Name=TUBB1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18117802	18118313	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001127;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_T0001127;transcript_name=NA12877_ch_T0001127;gene_name=TUBB1P2;ID=intron:NA12877_ch_T0001127:0;Name=TUBB1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18118314	18118593	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001127;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_T0001127;transcript_name=NA12877_ch_T0001127;gene_name=TUBB1P2;ID=exon:NA12877_ch_T0001127:1;Name=TUBB1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18118594	18118898	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001127;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_T0001127;transcript_name=NA12877_ch_T0001127;gene_name=TUBB1P2;ID=intron:NA12877_ch_T0001127:1;Name=TUBB1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18118899	18118955	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001127;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_T0001127;transcript_name=NA12877_ch_T0001127;gene_name=TUBB1P2;ID=exon:NA12877_ch_T0001127:2;Name=TUBB1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18116753	18118955	1000	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001128;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_G0000379;transcript_name=NA12877_ch_T0001128;gene_name=TUBB1P2;ID=NA12877_ch_T0001128;Name=TUBB1P2
NA12877_chrY	CAT	exon	18116753	18117801	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001128;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_T0001128;transcript_name=NA12877_ch_T0001128;gene_name=TUBB1P2;ID=exon:NA12877_ch_T0001128:0;Name=TUBB1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18117802	18118313	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001128;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_T0001128;transcript_name=NA12877_ch_T0001128;gene_name=TUBB1P2;ID=intron:NA12877_ch_T0001128:0;Name=TUBB1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18118314	18118404	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001128;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_T0001128;transcript_name=NA12877_ch_T0001128;gene_name=TUBB1P2;ID=exon:NA12877_ch_T0001128:1;Name=TUBB1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18118405	18118484	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001128;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_T0001128;transcript_name=NA12877_ch_T0001128;gene_name=TUBB1P2;ID=intron:NA12877_ch_T0001128:1;Name=TUBB1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18118485	18118593	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001128;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_T0001128;transcript_name=NA12877_ch_T0001128;gene_name=TUBB1P2;ID=exon:NA12877_ch_T0001128:2;Name=TUBB1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18118594	18118898	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001128;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_T0001128;transcript_name=NA12877_ch_T0001128;gene_name=TUBB1P2;ID=intron:NA12877_ch_T0001128:2;Name=TUBB1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18118899	18118955	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=NA12877_ch_T0001128;gene_id=NA12877_ch_G0000379;Parent=NA12877_ch_T0001128;transcript_name=NA12877_ch_T0001128;gene_name=TUBB1P2;ID=exon:NA12877_ch_T0001128:3;Name=TUBB1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18152004	18179880	.	-	.	source_gene_common_name=FAM224B;source_gene=ENSG00000230663.2;alternative_source_transcripts=ENST00000729283.1;gene_id=NA12877_ch_G0000380;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=NA12877_ch_G0000380;Name=FAM224B
NA12877_chrY	CAT	transcript	18152004	18179785	1000	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=NA12877_ch_T0001129;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001129;gene_name=FAM224B;ID=NA12877_ch_T0001129;Name=FAM224B
NA12877_chrY	CAT	exon	18152004	18152314	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=NA12877_ch_T0001129;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001129;transcript_name=NA12877_ch_T0001129;gene_name=FAM224B;ID=exon:NA12877_ch_T0001129:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18152315	18176622	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=NA12877_ch_T0001129;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001129;transcript_name=NA12877_ch_T0001129;gene_name=FAM224B;ID=intron:NA12877_ch_T0001129:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=NA12877_ch_T0001129;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001129;transcript_name=NA12877_ch_T0001129;gene_name=FAM224B;ID=exon:NA12877_ch_T0001129:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=NA12877_ch_T0001129;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001129;transcript_name=NA12877_ch_T0001129;gene_name=FAM224B;ID=intron:NA12877_ch_T0001129:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179785	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=NA12877_ch_T0001129;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001129;transcript_name=NA12877_ch_T0001129;gene_name=FAM224B;ID=exon:NA12877_ch_T0001129:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18152719	18179674	1000	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=NA12877_ch_T0001130;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001130;gene_name=FAM224B;ID=NA12877_ch_T0001130;Name=FAM224B
NA12877_chrY	CAT	exon	18152719	18153873	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=NA12877_ch_T0001130;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001130;transcript_name=NA12877_ch_T0001130;gene_name=FAM224B;ID=exon:NA12877_ch_T0001130:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=NA12877_ch_T0001130;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001130;transcript_name=NA12877_ch_T0001130;gene_name=FAM224B;ID=intron:NA12877_ch_T0001130:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=NA12877_ch_T0001130;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001130;transcript_name=NA12877_ch_T0001130;gene_name=FAM224B;ID=exon:NA12877_ch_T0001130:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18155694	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=NA12877_ch_T0001130;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001130;transcript_name=NA12877_ch_T0001130;gene_name=FAM224B;ID=intron:NA12877_ch_T0001130:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18155695	18155929	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=NA12877_ch_T0001130;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001130;transcript_name=NA12877_ch_T0001130;gene_name=FAM224B;ID=exon:NA12877_ch_T0001130:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18155930	18176622	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=NA12877_ch_T0001130;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001130;transcript_name=NA12877_ch_T0001130;gene_name=FAM224B;ID=intron:NA12877_ch_T0001130:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=NA12877_ch_T0001130;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001130;transcript_name=NA12877_ch_T0001130;gene_name=FAM224B;ID=exon:NA12877_ch_T0001130:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=NA12877_ch_T0001130;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001130;transcript_name=NA12877_ch_T0001130;gene_name=FAM224B;ID=intron:NA12877_ch_T0001130:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179674	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=NA12877_ch_T0001130;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001130;transcript_name=NA12877_ch_T0001130;gene_name=FAM224B;ID=exon:NA12877_ch_T0001130:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18152719	18179782	1000	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=NA12877_ch_T0001131;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001131;gene_name=FAM224B;ID=NA12877_ch_T0001131;Name=FAM224B
NA12877_chrY	CAT	exon	18152719	18153873	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=NA12877_ch_T0001131;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001131;transcript_name=NA12877_ch_T0001131;gene_name=FAM224B;ID=exon:NA12877_ch_T0001131:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=NA12877_ch_T0001131;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001131;transcript_name=NA12877_ch_T0001131;gene_name=FAM224B;ID=intron:NA12877_ch_T0001131:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=NA12877_ch_T0001131;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001131;transcript_name=NA12877_ch_T0001131;gene_name=FAM224B;ID=exon:NA12877_ch_T0001131:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18176622	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=NA12877_ch_T0001131;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001131;transcript_name=NA12877_ch_T0001131;gene_name=FAM224B;ID=intron:NA12877_ch_T0001131:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=NA12877_ch_T0001131;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001131;transcript_name=NA12877_ch_T0001131;gene_name=FAM224B;ID=exon:NA12877_ch_T0001131:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=NA12877_ch_T0001131;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001131;transcript_name=NA12877_ch_T0001131;gene_name=FAM224B;ID=intron:NA12877_ch_T0001131:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179782	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=NA12877_ch_T0001131;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001131;transcript_name=NA12877_ch_T0001131;gene_name=FAM224B;ID=exon:NA12877_ch_T0001131:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18152722	18179758	1000	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=NA12877_ch_T0001132;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001132;gene_name=FAM224B;ID=NA12877_ch_T0001132;Name=FAM224B
NA12877_chrY	CAT	exon	18152722	18153873	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=NA12877_ch_T0001132;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001132;transcript_name=NA12877_ch_T0001132;gene_name=FAM224B;ID=exon:NA12877_ch_T0001132:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=NA12877_ch_T0001132;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001132;transcript_name=NA12877_ch_T0001132;gene_name=FAM224B;ID=intron:NA12877_ch_T0001132:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=NA12877_ch_T0001132;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001132;transcript_name=NA12877_ch_T0001132;gene_name=FAM224B;ID=exon:NA12877_ch_T0001132:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18175157	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=NA12877_ch_T0001132;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001132;transcript_name=NA12877_ch_T0001132;gene_name=FAM224B;ID=intron:NA12877_ch_T0001132:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18175158	18175287	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=NA12877_ch_T0001132;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001132;transcript_name=NA12877_ch_T0001132;gene_name=FAM224B;ID=exon:NA12877_ch_T0001132:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=NA12877_ch_T0001132;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001132;transcript_name=NA12877_ch_T0001132;gene_name=FAM224B;ID=intron:NA12877_ch_T0001132:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=NA12877_ch_T0001132;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001132;transcript_name=NA12877_ch_T0001132;gene_name=FAM224B;ID=exon:NA12877_ch_T0001132:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=NA12877_ch_T0001132;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001132;transcript_name=NA12877_ch_T0001132;gene_name=FAM224B;ID=intron:NA12877_ch_T0001132:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179758	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=NA12877_ch_T0001132;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001132;transcript_name=NA12877_ch_T0001132;gene_name=FAM224B;ID=exon:NA12877_ch_T0001132:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18153201	18179753	1000	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=NA12877_ch_T0001133;Name=FAM224B
NA12877_chrY	CAT	exon	18153201	18153873	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=exon:NA12877_ch_T0001133:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=intron:NA12877_ch_T0001133:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=exon:NA12877_ch_T0001133:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18171316	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=intron:NA12877_ch_T0001133:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18171317	18171373	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=exon:NA12877_ch_T0001133:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18171374	18171798	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=intron:NA12877_ch_T0001133:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18171799	18171872	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=exon:NA12877_ch_T0001133:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18171873	18172666	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=intron:NA12877_ch_T0001133:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18172667	18172822	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=exon:NA12877_ch_T0001133:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18172823	18175157	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=intron:NA12877_ch_T0001133:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18175158	18175287	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=exon:NA12877_ch_T0001133:5;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=intron:NA12877_ch_T0001133:5;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=exon:NA12877_ch_T0001133:6;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=intron:NA12877_ch_T0001133:6;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179469	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=exon:NA12877_ch_T0001133:7;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179470	18179585	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=intron:NA12877_ch_T0001133:7;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179753	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=NA12877_ch_T0001133;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001133;transcript_name=NA12877_ch_T0001133;gene_name=FAM224B;ID=exon:NA12877_ch_T0001133:8;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18153213	18179794	1000	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=NA12877_ch_T0001134;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001134;gene_name=FAM224B;ID=NA12877_ch_T0001134;Name=FAM224B
NA12877_chrY	CAT	exon	18153213	18153873	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=NA12877_ch_T0001134;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001134;transcript_name=NA12877_ch_T0001134;gene_name=FAM224B;ID=exon:NA12877_ch_T0001134:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=NA12877_ch_T0001134;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001134;transcript_name=NA12877_ch_T0001134;gene_name=FAM224B;ID=intron:NA12877_ch_T0001134:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=NA12877_ch_T0001134;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001134;transcript_name=NA12877_ch_T0001134;gene_name=FAM224B;ID=exon:NA12877_ch_T0001134:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18176622	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=NA12877_ch_T0001134;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001134;transcript_name=NA12877_ch_T0001134;gene_name=FAM224B;ID=intron:NA12877_ch_T0001134:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=NA12877_ch_T0001134;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001134;transcript_name=NA12877_ch_T0001134;gene_name=FAM224B;ID=exon:NA12877_ch_T0001134:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=NA12877_ch_T0001134;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001134;transcript_name=NA12877_ch_T0001134;gene_name=FAM224B;ID=intron:NA12877_ch_T0001134:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179395	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=NA12877_ch_T0001134;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001134;transcript_name=NA12877_ch_T0001134;gene_name=FAM224B;ID=exon:NA12877_ch_T0001134:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179396	18179585	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=NA12877_ch_T0001134;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001134;transcript_name=NA12877_ch_T0001134;gene_name=FAM224B;ID=intron:NA12877_ch_T0001134:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179794	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=NA12877_ch_T0001134;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001134;transcript_name=NA12877_ch_T0001134;gene_name=FAM224B;ID=exon:NA12877_ch_T0001134:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18153213	18179731	1000	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=NA12877_ch_T0001135;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001135;gene_name=FAM224B;ID=NA12877_ch_T0001135;Name=FAM224B
NA12877_chrY	CAT	exon	18153213	18153873	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=NA12877_ch_T0001135;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001135;transcript_name=NA12877_ch_T0001135;gene_name=FAM224B;ID=exon:NA12877_ch_T0001135:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=NA12877_ch_T0001135;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001135;transcript_name=NA12877_ch_T0001135;gene_name=FAM224B;ID=intron:NA12877_ch_T0001135:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=NA12877_ch_T0001135;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001135;transcript_name=NA12877_ch_T0001135;gene_name=FAM224B;ID=exon:NA12877_ch_T0001135:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18176622	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=NA12877_ch_T0001135;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001135;transcript_name=NA12877_ch_T0001135;gene_name=FAM224B;ID=intron:NA12877_ch_T0001135:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176712	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=NA12877_ch_T0001135;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001135;transcript_name=NA12877_ch_T0001135;gene_name=FAM224B;ID=exon:NA12877_ch_T0001135:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176713	18179235	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=NA12877_ch_T0001135;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001135;transcript_name=NA12877_ch_T0001135;gene_name=FAM224B;ID=intron:NA12877_ch_T0001135:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179731	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=NA12877_ch_T0001135;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001135;transcript_name=NA12877_ch_T0001135;gene_name=FAM224B;ID=exon:NA12877_ch_T0001135:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18153213	18179716	1000	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=NA12877_ch_T0001136;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001136;gene_name=FAM224B;ID=NA12877_ch_T0001136;Name=FAM224B
NA12877_chrY	CAT	exon	18153213	18153272	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=NA12877_ch_T0001136;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001136;transcript_name=NA12877_ch_T0001136;gene_name=FAM224B;ID=exon:NA12877_ch_T0001136:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153273	18153746	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=NA12877_ch_T0001136;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001136;transcript_name=NA12877_ch_T0001136;gene_name=FAM224B;ID=intron:NA12877_ch_T0001136:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153747	18153873	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=NA12877_ch_T0001136;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001136;transcript_name=NA12877_ch_T0001136;gene_name=FAM224B;ID=exon:NA12877_ch_T0001136:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=NA12877_ch_T0001136;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001136;transcript_name=NA12877_ch_T0001136;gene_name=FAM224B;ID=intron:NA12877_ch_T0001136:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=NA12877_ch_T0001136;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001136;transcript_name=NA12877_ch_T0001136;gene_name=FAM224B;ID=exon:NA12877_ch_T0001136:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18176622	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=NA12877_ch_T0001136;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001136;transcript_name=NA12877_ch_T0001136;gene_name=FAM224B;ID=intron:NA12877_ch_T0001136:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=NA12877_ch_T0001136;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001136;transcript_name=NA12877_ch_T0001136;gene_name=FAM224B;ID=exon:NA12877_ch_T0001136:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=NA12877_ch_T0001136;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001136;transcript_name=NA12877_ch_T0001136;gene_name=FAM224B;ID=intron:NA12877_ch_T0001136:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179395	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=NA12877_ch_T0001136;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001136;transcript_name=NA12877_ch_T0001136;gene_name=FAM224B;ID=exon:NA12877_ch_T0001136:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179396	18179585	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=NA12877_ch_T0001136;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001136;transcript_name=NA12877_ch_T0001136;gene_name=FAM224B;ID=intron:NA12877_ch_T0001136:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179716	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=NA12877_ch_T0001136;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001136;transcript_name=NA12877_ch_T0001136;gene_name=FAM224B;ID=exon:NA12877_ch_T0001136:5;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18153215	18179755	1000	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=NA12877_ch_T0001137;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001137;gene_name=FAM224B;ID=NA12877_ch_T0001137;Name=FAM224B
NA12877_chrY	CAT	exon	18153215	18153873	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=NA12877_ch_T0001137;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001137;transcript_name=NA12877_ch_T0001137;gene_name=FAM224B;ID=exon:NA12877_ch_T0001137:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=NA12877_ch_T0001137;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001137;transcript_name=NA12877_ch_T0001137;gene_name=FAM224B;ID=intron:NA12877_ch_T0001137:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=NA12877_ch_T0001137;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001137;transcript_name=NA12877_ch_T0001137;gene_name=FAM224B;ID=exon:NA12877_ch_T0001137:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18175157	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=NA12877_ch_T0001137;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001137;transcript_name=NA12877_ch_T0001137;gene_name=FAM224B;ID=intron:NA12877_ch_T0001137:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18175158	18175287	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=NA12877_ch_T0001137;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001137;transcript_name=NA12877_ch_T0001137;gene_name=FAM224B;ID=exon:NA12877_ch_T0001137:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=NA12877_ch_T0001137;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001137;transcript_name=NA12877_ch_T0001137;gene_name=FAM224B;ID=intron:NA12877_ch_T0001137:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=NA12877_ch_T0001137;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001137;transcript_name=NA12877_ch_T0001137;gene_name=FAM224B;ID=exon:NA12877_ch_T0001137:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=NA12877_ch_T0001137;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001137;transcript_name=NA12877_ch_T0001137;gene_name=FAM224B;ID=intron:NA12877_ch_T0001137:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179395	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=NA12877_ch_T0001137;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001137;transcript_name=NA12877_ch_T0001137;gene_name=FAM224B;ID=exon:NA12877_ch_T0001137:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179396	18179585	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=NA12877_ch_T0001137;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001137;transcript_name=NA12877_ch_T0001137;gene_name=FAM224B;ID=intron:NA12877_ch_T0001137:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179755	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=NA12877_ch_T0001137;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001137;transcript_name=NA12877_ch_T0001137;gene_name=FAM224B;ID=exon:NA12877_ch_T0001137:5;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18153218	18179774	1000	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=NA12877_ch_T0001138;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001138;gene_name=FAM224B;ID=NA12877_ch_T0001138;Name=FAM224B
NA12877_chrY	CAT	exon	18153218	18153272	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=NA12877_ch_T0001138;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001138;transcript_name=NA12877_ch_T0001138;gene_name=FAM224B;ID=exon:NA12877_ch_T0001138:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153273	18153746	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=NA12877_ch_T0001138;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001138;transcript_name=NA12877_ch_T0001138;gene_name=FAM224B;ID=intron:NA12877_ch_T0001138:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153747	18153873	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=NA12877_ch_T0001138;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001138;transcript_name=NA12877_ch_T0001138;gene_name=FAM224B;ID=exon:NA12877_ch_T0001138:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=NA12877_ch_T0001138;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001138;transcript_name=NA12877_ch_T0001138;gene_name=FAM224B;ID=intron:NA12877_ch_T0001138:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=NA12877_ch_T0001138;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001138;transcript_name=NA12877_ch_T0001138;gene_name=FAM224B;ID=exon:NA12877_ch_T0001138:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18176622	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=NA12877_ch_T0001138;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001138;transcript_name=NA12877_ch_T0001138;gene_name=FAM224B;ID=intron:NA12877_ch_T0001138:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=NA12877_ch_T0001138;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001138;transcript_name=NA12877_ch_T0001138;gene_name=FAM224B;ID=exon:NA12877_ch_T0001138:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=NA12877_ch_T0001138;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001138;transcript_name=NA12877_ch_T0001138;gene_name=FAM224B;ID=intron:NA12877_ch_T0001138:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179774	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=NA12877_ch_T0001138;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001138;transcript_name=NA12877_ch_T0001138;gene_name=FAM224B;ID=exon:NA12877_ch_T0001138:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18153485	18179724	1000	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=NA12877_ch_T0001139;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001139;gene_name=FAM224B;ID=NA12877_ch_T0001139;Name=FAM224B
NA12877_chrY	CAT	exon	18153485	18153873	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=NA12877_ch_T0001139;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001139;transcript_name=NA12877_ch_T0001139;gene_name=FAM224B;ID=exon:NA12877_ch_T0001139:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=NA12877_ch_T0001139;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001139;transcript_name=NA12877_ch_T0001139;gene_name=FAM224B;ID=intron:NA12877_ch_T0001139:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=NA12877_ch_T0001139;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001139;transcript_name=NA12877_ch_T0001139;gene_name=FAM224B;ID=exon:NA12877_ch_T0001139:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18175157	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=NA12877_ch_T0001139;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001139;transcript_name=NA12877_ch_T0001139;gene_name=FAM224B;ID=intron:NA12877_ch_T0001139:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18175158	18175287	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=NA12877_ch_T0001139;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001139;transcript_name=NA12877_ch_T0001139;gene_name=FAM224B;ID=exon:NA12877_ch_T0001139:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=NA12877_ch_T0001139;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001139;transcript_name=NA12877_ch_T0001139;gene_name=FAM224B;ID=intron:NA12877_ch_T0001139:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=NA12877_ch_T0001139;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001139;transcript_name=NA12877_ch_T0001139;gene_name=FAM224B;ID=exon:NA12877_ch_T0001139:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18177594	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=NA12877_ch_T0001139;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001139;transcript_name=NA12877_ch_T0001139;gene_name=FAM224B;ID=intron:NA12877_ch_T0001139:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18177595	18177692	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=NA12877_ch_T0001139;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001139;transcript_name=NA12877_ch_T0001139;gene_name=FAM224B;ID=exon:NA12877_ch_T0001139:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18177693	18179585	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=NA12877_ch_T0001139;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001139;transcript_name=NA12877_ch_T0001139;gene_name=FAM224B;ID=intron:NA12877_ch_T0001139:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179724	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=NA12877_ch_T0001139;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001139;transcript_name=NA12877_ch_T0001139;gene_name=FAM224B;ID=exon:NA12877_ch_T0001139:5;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18153487	18179730	1000	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=NA12877_ch_T0001140;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001140;gene_name=FAM224B;ID=NA12877_ch_T0001140;Name=FAM224B
NA12877_chrY	CAT	exon	18153487	18153873	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=NA12877_ch_T0001140;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001140;transcript_name=NA12877_ch_T0001140;gene_name=FAM224B;ID=exon:NA12877_ch_T0001140:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=NA12877_ch_T0001140;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001140;transcript_name=NA12877_ch_T0001140;gene_name=FAM224B;ID=intron:NA12877_ch_T0001140:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=NA12877_ch_T0001140;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001140;transcript_name=NA12877_ch_T0001140;gene_name=FAM224B;ID=exon:NA12877_ch_T0001140:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18176622	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=NA12877_ch_T0001140;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001140;transcript_name=NA12877_ch_T0001140;gene_name=FAM224B;ID=intron:NA12877_ch_T0001140:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=NA12877_ch_T0001140;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001140;transcript_name=NA12877_ch_T0001140;gene_name=FAM224B;ID=exon:NA12877_ch_T0001140:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=NA12877_ch_T0001140;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001140;transcript_name=NA12877_ch_T0001140;gene_name=FAM224B;ID=intron:NA12877_ch_T0001140:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179469	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=NA12877_ch_T0001140;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001140;transcript_name=NA12877_ch_T0001140;gene_name=FAM224B;ID=exon:NA12877_ch_T0001140:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179470	18179585	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=NA12877_ch_T0001140;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001140;transcript_name=NA12877_ch_T0001140;gene_name=FAM224B;ID=intron:NA12877_ch_T0001140:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179730	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=NA12877_ch_T0001140;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001140;transcript_name=NA12877_ch_T0001140;gene_name=FAM224B;ID=exon:NA12877_ch_T0001140:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18153490	18179570	1000	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=NA12877_ch_T0001141;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001141;gene_name=FAM224B;ID=NA12877_ch_T0001141;Name=FAM224B
NA12877_chrY	CAT	exon	18153490	18153873	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=NA12877_ch_T0001141;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001141;transcript_name=NA12877_ch_T0001141;gene_name=FAM224B;ID=exon:NA12877_ch_T0001141:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=NA12877_ch_T0001141;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001141;transcript_name=NA12877_ch_T0001141;gene_name=FAM224B;ID=intron:NA12877_ch_T0001141:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=NA12877_ch_T0001141;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001141;transcript_name=NA12877_ch_T0001141;gene_name=FAM224B;ID=exon:NA12877_ch_T0001141:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18171316	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=NA12877_ch_T0001141;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001141;transcript_name=NA12877_ch_T0001141;gene_name=FAM224B;ID=intron:NA12877_ch_T0001141:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18171317	18171373	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=NA12877_ch_T0001141;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001141;transcript_name=NA12877_ch_T0001141;gene_name=FAM224B;ID=exon:NA12877_ch_T0001141:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18171374	18176622	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=NA12877_ch_T0001141;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001141;transcript_name=NA12877_ch_T0001141;gene_name=FAM224B;ID=intron:NA12877_ch_T0001141:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=NA12877_ch_T0001141;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001141;transcript_name=NA12877_ch_T0001141;gene_name=FAM224B;ID=exon:NA12877_ch_T0001141:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=NA12877_ch_T0001141;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001141;transcript_name=NA12877_ch_T0001141;gene_name=FAM224B;ID=intron:NA12877_ch_T0001141:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179570	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=NA12877_ch_T0001141;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001141;transcript_name=NA12877_ch_T0001141;gene_name=FAM224B;ID=exon:NA12877_ch_T0001141:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18153501	18179774	1000	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=NA12877_ch_T0001142;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001142;gene_name=FAM224B;ID=NA12877_ch_T0001142;Name=FAM224B
NA12877_chrY	CAT	exon	18153501	18153873	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=NA12877_ch_T0001142;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001142;transcript_name=NA12877_ch_T0001142;gene_name=FAM224B;ID=exon:NA12877_ch_T0001142:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18153874	18153960	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=NA12877_ch_T0001142;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001142;transcript_name=NA12877_ch_T0001142;gene_name=FAM224B;ID=intron:NA12877_ch_T0001142:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18153961	18154045	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=NA12877_ch_T0001142;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001142;transcript_name=NA12877_ch_T0001142;gene_name=FAM224B;ID=exon:NA12877_ch_T0001142:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18154046	18179585	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=NA12877_ch_T0001142;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001142;transcript_name=NA12877_ch_T0001142;gene_name=FAM224B;ID=intron:NA12877_ch_T0001142:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179774	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=NA12877_ch_T0001142;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001142;transcript_name=NA12877_ch_T0001142;gene_name=FAM224B;ID=exon:NA12877_ch_T0001142:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18174263	18179785	1000	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=NA12877_ch_T0001146;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001146;gene_name=FAM224B;ID=NA12877_ch_T0001146;Name=FAM224B
NA12877_chrY	CAT	exon	18174263	18175287	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=NA12877_ch_T0001146;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001146;transcript_name=NA12877_ch_T0001146;gene_name=FAM224B;ID=exon:NA12877_ch_T0001146:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=NA12877_ch_T0001146;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001146;transcript_name=NA12877_ch_T0001146;gene_name=FAM224B;ID=intron:NA12877_ch_T0001146:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=NA12877_ch_T0001146;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001146;transcript_name=NA12877_ch_T0001146;gene_name=FAM224B;ID=exon:NA12877_ch_T0001146:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=NA12877_ch_T0001146;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001146;transcript_name=NA12877_ch_T0001146;gene_name=FAM224B;ID=intron:NA12877_ch_T0001146:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179785	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=NA12877_ch_T0001146;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001146;transcript_name=NA12877_ch_T0001146;gene_name=FAM224B;ID=exon:NA12877_ch_T0001146:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175047	18179880	1000	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=NA12877_ch_T0001147;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001147;gene_name=FAM224B;ID=NA12877_ch_T0001147;Name=FAM224B
NA12877_chrY	CAT	exon	18175047	18175287	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=NA12877_ch_T0001147;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001147;transcript_name=NA12877_ch_T0001147;gene_name=FAM224B;ID=exon:NA12877_ch_T0001147:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=NA12877_ch_T0001147;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001147;transcript_name=NA12877_ch_T0001147;gene_name=FAM224B;ID=intron:NA12877_ch_T0001147:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=NA12877_ch_T0001147;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001147;transcript_name=NA12877_ch_T0001147;gene_name=FAM224B;ID=exon:NA12877_ch_T0001147:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=NA12877_ch_T0001147;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001147;transcript_name=NA12877_ch_T0001147;gene_name=FAM224B;ID=intron:NA12877_ch_T0001147:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179395	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=NA12877_ch_T0001147;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001147;transcript_name=NA12877_ch_T0001147;gene_name=FAM224B;ID=exon:NA12877_ch_T0001147:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179396	18179585	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=NA12877_ch_T0001147;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001147;transcript_name=NA12877_ch_T0001147;gene_name=FAM224B;ID=intron:NA12877_ch_T0001147:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179880	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=NA12877_ch_T0001147;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001147;transcript_name=NA12877_ch_T0001147;gene_name=FAM224B;ID=exon:NA12877_ch_T0001147:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175063	18179792	1000	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=NA12877_ch_T0001148;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001148;gene_name=FAM224B;ID=NA12877_ch_T0001148;Name=FAM224B
NA12877_chrY	CAT	exon	18175063	18175287	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=NA12877_ch_T0001148;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001148;transcript_name=NA12877_ch_T0001148;gene_name=FAM224B;ID=exon:NA12877_ch_T0001148:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=NA12877_ch_T0001148;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001148;transcript_name=NA12877_ch_T0001148;gene_name=FAM224B;ID=intron:NA12877_ch_T0001148:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=NA12877_ch_T0001148;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001148;transcript_name=NA12877_ch_T0001148;gene_name=FAM224B;ID=exon:NA12877_ch_T0001148:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=NA12877_ch_T0001148;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001148;transcript_name=NA12877_ch_T0001148;gene_name=FAM224B;ID=intron:NA12877_ch_T0001148:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179469	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=NA12877_ch_T0001148;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001148;transcript_name=NA12877_ch_T0001148;gene_name=FAM224B;ID=exon:NA12877_ch_T0001148:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179470	18179585	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=NA12877_ch_T0001148;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001148;transcript_name=NA12877_ch_T0001148;gene_name=FAM224B;ID=intron:NA12877_ch_T0001148:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179792	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=NA12877_ch_T0001148;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001148;transcript_name=NA12877_ch_T0001148;gene_name=FAM224B;ID=exon:NA12877_ch_T0001148:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175063	18179774	1000	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=NA12877_ch_T0001149;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001149;gene_name=FAM224B;ID=NA12877_ch_T0001149;Name=FAM224B
NA12877_chrY	CAT	exon	18175063	18175287	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=NA12877_ch_T0001149;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001149;transcript_name=NA12877_ch_T0001149;gene_name=FAM224B;ID=exon:NA12877_ch_T0001149:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=NA12877_ch_T0001149;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001149;transcript_name=NA12877_ch_T0001149;gene_name=FAM224B;ID=intron:NA12877_ch_T0001149:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176712	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=NA12877_ch_T0001149;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001149;transcript_name=NA12877_ch_T0001149;gene_name=FAM224B;ID=exon:NA12877_ch_T0001149:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176713	18179235	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=NA12877_ch_T0001149;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001149;transcript_name=NA12877_ch_T0001149;gene_name=FAM224B;ID=intron:NA12877_ch_T0001149:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179395	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=NA12877_ch_T0001149;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001149;transcript_name=NA12877_ch_T0001149;gene_name=FAM224B;ID=exon:NA12877_ch_T0001149:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179396	18179585	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=NA12877_ch_T0001149;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001149;transcript_name=NA12877_ch_T0001149;gene_name=FAM224B;ID=intron:NA12877_ch_T0001149:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179774	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=NA12877_ch_T0001149;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001149;transcript_name=NA12877_ch_T0001149;gene_name=FAM224B;ID=exon:NA12877_ch_T0001149:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175077	18179789	1000	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=NA12877_ch_T0001150;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001150;gene_name=FAM224B;ID=NA12877_ch_T0001150;Name=FAM224B
NA12877_chrY	CAT	exon	18175077	18175287	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=NA12877_ch_T0001150;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001150;transcript_name=NA12877_ch_T0001150;gene_name=FAM224B;ID=exon:NA12877_ch_T0001150:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=NA12877_ch_T0001150;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001150;transcript_name=NA12877_ch_T0001150;gene_name=FAM224B;ID=intron:NA12877_ch_T0001150:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=NA12877_ch_T0001150;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001150;transcript_name=NA12877_ch_T0001150;gene_name=FAM224B;ID=exon:NA12877_ch_T0001150:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179585	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=NA12877_ch_T0001150;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001150;transcript_name=NA12877_ch_T0001150;gene_name=FAM224B;ID=intron:NA12877_ch_T0001150:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179789	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=NA12877_ch_T0001150;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001150;transcript_name=NA12877_ch_T0001150;gene_name=FAM224B;ID=exon:NA12877_ch_T0001150:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175081	18179746	1000	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=NA12877_ch_T0001151;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001151;gene_name=FAM224B;ID=NA12877_ch_T0001151;Name=FAM224B
NA12877_chrY	CAT	exon	18175081	18175287	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=NA12877_ch_T0001151;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001151;transcript_name=NA12877_ch_T0001151;gene_name=FAM224B;ID=exon:NA12877_ch_T0001151:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=NA12877_ch_T0001151;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001151;transcript_name=NA12877_ch_T0001151;gene_name=FAM224B;ID=intron:NA12877_ch_T0001151:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176712	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=NA12877_ch_T0001151;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001151;transcript_name=NA12877_ch_T0001151;gene_name=FAM224B;ID=exon:NA12877_ch_T0001151:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176713	18179235	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=NA12877_ch_T0001151;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001151;transcript_name=NA12877_ch_T0001151;gene_name=FAM224B;ID=intron:NA12877_ch_T0001151:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179746	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=NA12877_ch_T0001151;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001151;transcript_name=NA12877_ch_T0001151;gene_name=FAM224B;ID=exon:NA12877_ch_T0001151:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175081	18179731	1000	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=NA12877_ch_T0001152;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001152;gene_name=FAM224B;ID=NA12877_ch_T0001152;Name=FAM224B
NA12877_chrY	CAT	exon	18175081	18175287	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=NA12877_ch_T0001152;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001152;transcript_name=NA12877_ch_T0001152;gene_name=FAM224B;ID=exon:NA12877_ch_T0001152:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=NA12877_ch_T0001152;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001152;transcript_name=NA12877_ch_T0001152;gene_name=FAM224B;ID=intron:NA12877_ch_T0001152:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18177692	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=NA12877_ch_T0001152;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001152;transcript_name=NA12877_ch_T0001152;gene_name=FAM224B;ID=exon:NA12877_ch_T0001152:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18177693	18179235	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=NA12877_ch_T0001152;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001152;transcript_name=NA12877_ch_T0001152;gene_name=FAM224B;ID=intron:NA12877_ch_T0001152:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179731	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=NA12877_ch_T0001152;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001152;transcript_name=NA12877_ch_T0001152;gene_name=FAM224B;ID=exon:NA12877_ch_T0001152:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175085	18179763	1000	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=NA12877_ch_T0001153;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001153;gene_name=FAM224B;ID=NA12877_ch_T0001153;Name=FAM224B
NA12877_chrY	CAT	exon	18175085	18175287	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=NA12877_ch_T0001153;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001153;transcript_name=NA12877_ch_T0001153;gene_name=FAM224B;ID=exon:NA12877_ch_T0001153:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=NA12877_ch_T0001153;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001153;transcript_name=NA12877_ch_T0001153;gene_name=FAM224B;ID=intron:NA12877_ch_T0001153:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=NA12877_ch_T0001153;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001153;transcript_name=NA12877_ch_T0001153;gene_name=FAM224B;ID=exon:NA12877_ch_T0001153:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18177594	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=NA12877_ch_T0001153;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001153;transcript_name=NA12877_ch_T0001153;gene_name=FAM224B;ID=intron:NA12877_ch_T0001153:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18177595	18177692	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=NA12877_ch_T0001153;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001153;transcript_name=NA12877_ch_T0001153;gene_name=FAM224B;ID=exon:NA12877_ch_T0001153:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18177693	18179585	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=NA12877_ch_T0001153;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001153;transcript_name=NA12877_ch_T0001153;gene_name=FAM224B;ID=intron:NA12877_ch_T0001153:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179763	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=NA12877_ch_T0001153;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001153;transcript_name=NA12877_ch_T0001153;gene_name=FAM224B;ID=exon:NA12877_ch_T0001153:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175096	18179772	1000	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=NA12877_ch_T0001154;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001154;gene_name=FAM224B;ID=NA12877_ch_T0001154;Name=FAM224B
NA12877_chrY	CAT	exon	18175096	18175287	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=NA12877_ch_T0001154;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001154;transcript_name=NA12877_ch_T0001154;gene_name=FAM224B;ID=exon:NA12877_ch_T0001154:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=NA12877_ch_T0001154;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001154;transcript_name=NA12877_ch_T0001154;gene_name=FAM224B;ID=intron:NA12877_ch_T0001154:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=NA12877_ch_T0001154;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001154;transcript_name=NA12877_ch_T0001154;gene_name=FAM224B;ID=exon:NA12877_ch_T0001154:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=NA12877_ch_T0001154;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001154;transcript_name=NA12877_ch_T0001154;gene_name=FAM224B;ID=intron:NA12877_ch_T0001154:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179371	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=NA12877_ch_T0001154;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001154;transcript_name=NA12877_ch_T0001154;gene_name=FAM224B;ID=exon:NA12877_ch_T0001154:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179372	18179585	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=NA12877_ch_T0001154;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001154;transcript_name=NA12877_ch_T0001154;gene_name=FAM224B;ID=intron:NA12877_ch_T0001154:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179772	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=NA12877_ch_T0001154;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001154;transcript_name=NA12877_ch_T0001154;gene_name=FAM224B;ID=exon:NA12877_ch_T0001154:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175100	18179783	1000	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=NA12877_ch_T0001155;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001155;gene_name=FAM224B;ID=NA12877_ch_T0001155;Name=FAM224B
NA12877_chrY	CAT	exon	18175100	18175287	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=NA12877_ch_T0001155;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001155;transcript_name=NA12877_ch_T0001155;gene_name=FAM224B;ID=exon:NA12877_ch_T0001155:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=NA12877_ch_T0001155;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001155;transcript_name=NA12877_ch_T0001155;gene_name=FAM224B;ID=intron:NA12877_ch_T0001155:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=NA12877_ch_T0001155;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001155;transcript_name=NA12877_ch_T0001155;gene_name=FAM224B;ID=exon:NA12877_ch_T0001155:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18177594	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=NA12877_ch_T0001155;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001155;transcript_name=NA12877_ch_T0001155;gene_name=FAM224B;ID=intron:NA12877_ch_T0001155:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18177595	18177692	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=NA12877_ch_T0001155;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001155;transcript_name=NA12877_ch_T0001155;gene_name=FAM224B;ID=exon:NA12877_ch_T0001155:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18177693	18179235	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=NA12877_ch_T0001155;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001155;transcript_name=NA12877_ch_T0001155;gene_name=FAM224B;ID=intron:NA12877_ch_T0001155:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179395	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=NA12877_ch_T0001155;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001155;transcript_name=NA12877_ch_T0001155;gene_name=FAM224B;ID=exon:NA12877_ch_T0001155:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179396	18179585	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=NA12877_ch_T0001155;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001155;transcript_name=NA12877_ch_T0001155;gene_name=FAM224B;ID=intron:NA12877_ch_T0001155:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179783	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=NA12877_ch_T0001155;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001155;transcript_name=NA12877_ch_T0001155;gene_name=FAM224B;ID=exon:NA12877_ch_T0001155:4;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175100	18179724	1000	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=NA12877_ch_T0001156;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001156;gene_name=FAM224B;ID=NA12877_ch_T0001156;Name=FAM224B
NA12877_chrY	CAT	exon	18175100	18175287	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=NA12877_ch_T0001156;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001156;transcript_name=NA12877_ch_T0001156;gene_name=FAM224B;ID=exon:NA12877_ch_T0001156:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=NA12877_ch_T0001156;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001156;transcript_name=NA12877_ch_T0001156;gene_name=FAM224B;ID=intron:NA12877_ch_T0001156:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=NA12877_ch_T0001156;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001156;transcript_name=NA12877_ch_T0001156;gene_name=FAM224B;ID=exon:NA12877_ch_T0001156:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18179235	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=NA12877_ch_T0001156;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001156;transcript_name=NA12877_ch_T0001156;gene_name=FAM224B;ID=intron:NA12877_ch_T0001156:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179357	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=NA12877_ch_T0001156;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001156;transcript_name=NA12877_ch_T0001156;gene_name=FAM224B;ID=exon:NA12877_ch_T0001156:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179358	18179585	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=NA12877_ch_T0001156;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001156;transcript_name=NA12877_ch_T0001156;gene_name=FAM224B;ID=intron:NA12877_ch_T0001156:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179724	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=NA12877_ch_T0001156;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001156;transcript_name=NA12877_ch_T0001156;gene_name=FAM224B;ID=exon:NA12877_ch_T0001156:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175102	18179688	1000	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=NA12877_ch_T0001157;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001157;gene_name=FAM224B;ID=NA12877_ch_T0001157;Name=FAM224B
NA12877_chrY	CAT	exon	18175102	18175287	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=NA12877_ch_T0001157;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001157;transcript_name=NA12877_ch_T0001157;gene_name=FAM224B;ID=exon:NA12877_ch_T0001157:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18179235	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=NA12877_ch_T0001157;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001157;transcript_name=NA12877_ch_T0001157;gene_name=FAM224B;ID=intron:NA12877_ch_T0001157:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179688	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=NA12877_ch_T0001157;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001157;transcript_name=NA12877_ch_T0001157;gene_name=FAM224B;ID=exon:NA12877_ch_T0001157:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175104	18179778	1000	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=NA12877_ch_T0001158;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001158;gene_name=FAM224B;ID=NA12877_ch_T0001158;Name=FAM224B
NA12877_chrY	CAT	exon	18175104	18175287	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=NA12877_ch_T0001158;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001158;transcript_name=NA12877_ch_T0001158;gene_name=FAM224B;ID=exon:NA12877_ch_T0001158:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=NA12877_ch_T0001158;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001158;transcript_name=NA12877_ch_T0001158;gene_name=FAM224B;ID=intron:NA12877_ch_T0001158:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176740	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=NA12877_ch_T0001158;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001158;transcript_name=NA12877_ch_T0001158;gene_name=FAM224B;ID=exon:NA12877_ch_T0001158:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176741	18177594	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=NA12877_ch_T0001158;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001158;transcript_name=NA12877_ch_T0001158;gene_name=FAM224B;ID=intron:NA12877_ch_T0001158:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18177595	18177692	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=NA12877_ch_T0001158;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001158;transcript_name=NA12877_ch_T0001158;gene_name=FAM224B;ID=exon:NA12877_ch_T0001158:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18177693	18179235	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=NA12877_ch_T0001158;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001158;transcript_name=NA12877_ch_T0001158;gene_name=FAM224B;ID=intron:NA12877_ch_T0001158:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179778	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=NA12877_ch_T0001158;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001158;transcript_name=NA12877_ch_T0001158;gene_name=FAM224B;ID=exon:NA12877_ch_T0001158:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175104	18179731	1000	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=NA12877_ch_T0001159;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001159;gene_name=FAM224B;ID=NA12877_ch_T0001159;Name=FAM224B
NA12877_chrY	CAT	exon	18175104	18175287	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=NA12877_ch_T0001159;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001159;transcript_name=NA12877_ch_T0001159;gene_name=FAM224B;ID=exon:NA12877_ch_T0001159:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=NA12877_ch_T0001159;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001159;transcript_name=NA12877_ch_T0001159;gene_name=FAM224B;ID=intron:NA12877_ch_T0001159:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18177692	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=NA12877_ch_T0001159;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001159;transcript_name=NA12877_ch_T0001159;gene_name=FAM224B;ID=exon:NA12877_ch_T0001159:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18177693	18179235	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=NA12877_ch_T0001159;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001159;transcript_name=NA12877_ch_T0001159;gene_name=FAM224B;ID=intron:NA12877_ch_T0001159:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179395	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=NA12877_ch_T0001159;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001159;transcript_name=NA12877_ch_T0001159;gene_name=FAM224B;ID=exon:NA12877_ch_T0001159:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179396	18179585	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=NA12877_ch_T0001159;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001159;transcript_name=NA12877_ch_T0001159;gene_name=FAM224B;ID=intron:NA12877_ch_T0001159:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179731	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=NA12877_ch_T0001159;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001159;transcript_name=NA12877_ch_T0001159;gene_name=FAM224B;ID=exon:NA12877_ch_T0001159:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175104	18179726	1000	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=NA12877_ch_T0001160;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001160;gene_name=FAM224B;ID=NA12877_ch_T0001160;Name=FAM224B
NA12877_chrY	CAT	exon	18175104	18175287	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=NA12877_ch_T0001160;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001160;transcript_name=NA12877_ch_T0001160;gene_name=FAM224B;ID=exon:NA12877_ch_T0001160:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18179235	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=NA12877_ch_T0001160;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001160;transcript_name=NA12877_ch_T0001160;gene_name=FAM224B;ID=intron:NA12877_ch_T0001160:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179395	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=NA12877_ch_T0001160;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001160;transcript_name=NA12877_ch_T0001160;gene_name=FAM224B;ID=exon:NA12877_ch_T0001160:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179396	18179585	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=NA12877_ch_T0001160;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001160;transcript_name=NA12877_ch_T0001160;gene_name=FAM224B;ID=intron:NA12877_ch_T0001160:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179726	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=NA12877_ch_T0001160;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001160;transcript_name=NA12877_ch_T0001160;gene_name=FAM224B;ID=exon:NA12877_ch_T0001160:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18175104	18179725	1000	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=NA12877_ch_T0001161;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001161;gene_name=FAM224B;ID=NA12877_ch_T0001161;Name=FAM224B
NA12877_chrY	CAT	exon	18175104	18175287	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=NA12877_ch_T0001161;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001161;transcript_name=NA12877_ch_T0001161;gene_name=FAM224B;ID=exon:NA12877_ch_T0001161:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18175288	18176622	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=NA12877_ch_T0001161;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001161;transcript_name=NA12877_ch_T0001161;gene_name=FAM224B;ID=intron:NA12877_ch_T0001161:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18176623	18176712	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=NA12877_ch_T0001161;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001161;transcript_name=NA12877_ch_T0001161;gene_name=FAM224B;ID=exon:NA12877_ch_T0001161:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176713	18179235	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=NA12877_ch_T0001161;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001161;transcript_name=NA12877_ch_T0001161;gene_name=FAM224B;ID=intron:NA12877_ch_T0001161:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179469	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=NA12877_ch_T0001161;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001161;transcript_name=NA12877_ch_T0001161;gene_name=FAM224B;ID=exon:NA12877_ch_T0001161:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179470	18179585	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=NA12877_ch_T0001161;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001161;transcript_name=NA12877_ch_T0001161;gene_name=FAM224B;ID=intron:NA12877_ch_T0001161:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179725	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=NA12877_ch_T0001161;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001161;transcript_name=NA12877_ch_T0001161;gene_name=FAM224B;ID=exon:NA12877_ch_T0001161:3;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18176325	18179726	1000	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=NA12877_ch_T0001162;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001162;gene_name=FAM224B;ID=NA12877_ch_T0001162;Name=FAM224B
NA12877_chrY	CAT	exon	18176325	18176583	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=NA12877_ch_T0001162;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001162;transcript_name=NA12877_ch_T0001162;gene_name=FAM224B;ID=exon:NA12877_ch_T0001162:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18176584	18179235	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=NA12877_ch_T0001162;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001162;transcript_name=NA12877_ch_T0001162;gene_name=FAM224B;ID=intron:NA12877_ch_T0001162:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179236	18179726	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=NA12877_ch_T0001162;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001162;transcript_name=NA12877_ch_T0001162;gene_name=FAM224B;ID=exon:NA12877_ch_T0001162:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18177656	18179776	1000	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=NA12877_ch_T0001163;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_G0000380;transcript_name=NA12877_ch_T0001163;gene_name=FAM224B;ID=NA12877_ch_T0001163;Name=FAM224B
NA12877_chrY	CAT	exon	18177656	18177692	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=NA12877_ch_T0001163;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001163;transcript_name=NA12877_ch_T0001163;gene_name=FAM224B;ID=exon:NA12877_ch_T0001163:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18177693	18178807	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=NA12877_ch_T0001163;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001163;transcript_name=NA12877_ch_T0001163;gene_name=FAM224B;ID=intron:NA12877_ch_T0001163:0;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18178808	18179004	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=NA12877_ch_T0001163;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001163;transcript_name=NA12877_ch_T0001163;gene_name=FAM224B;ID=exon:NA12877_ch_T0001163:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18179005	18179585	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=NA12877_ch_T0001163;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001163;transcript_name=NA12877_ch_T0001163;gene_name=FAM224B;ID=intron:NA12877_ch_T0001163:1;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18179586	18179776	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=NA12877_ch_T0001163;gene_id=NA12877_ch_G0000380;Parent=NA12877_ch_T0001163;transcript_name=NA12877_ch_T0001163;gene_name=FAM224B;ID=exon:NA12877_ch_T0001163:2;Name=FAM224B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18157783	18157895	.	+	.	source_gene_common_name=RNA5SP520;source_gene=ENSG00000252315.1;alternative_source_transcripts=ENST00000516506.1;gene_id=NA12877_ch_G0000381;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP520;gene_sources=liftoff;ID=NA12877_ch_G0000381;Name=RNA5SP520
NA12877_chrY	CAT	transcript	18157783	18157895	1000	+	.	source_transcript=ENST00000516506.1;source_transcript_name=RNA5SP520-201;source_gene=ENSG00000252315.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252315.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516506.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516506.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP520;alternative_source_transcripts=ENST00000516506.1;transcript_id=NA12877_ch_T0001143;gene_id=NA12877_ch_G0000381;Parent=NA12877_ch_G0000381;transcript_name=NA12877_ch_T0001143;gene_name=RNA5SP520;ID=NA12877_ch_T0001143;Name=RNA5SP520
NA12877_chrY	CAT	exon	18157783	18157895	.	+	.	source_transcript=ENST00000516506.1;source_transcript_name=RNA5SP520-201;source_gene=ENSG00000252315.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252315.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516506.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516506.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP520;alternative_source_transcripts=ENST00000516506.1;transcript_id=NA12877_ch_T0001143;gene_id=NA12877_ch_G0000381;Parent=NA12877_ch_T0001143;transcript_name=NA12877_ch_T0001143;gene_name=RNA5SP520;ID=exon:NA12877_ch_T0001143:0;Name=RNA5SP520;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18159693	18159808	.	+	.	source_gene_common_name=RNA5SP521;source_gene=ENSG00000252012.1;alternative_source_transcripts=ENST00000516203.1;gene_id=NA12877_ch_G0000382;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP521;gene_sources=liftoff;ID=NA12877_ch_G0000382;Name=RNA5SP521
NA12877_chrY	CAT	transcript	18159693	18159808	1000	+	.	source_transcript=ENST00000516203.1;source_transcript_name=RNA5SP521-201;source_gene=ENSG00000252012.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252012.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516203.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP521;alternative_source_transcripts=ENST00000516203.1;transcript_id=NA12877_ch_T0001144;gene_id=NA12877_ch_G0000382;Parent=NA12877_ch_G0000382;transcript_name=NA12877_ch_T0001144;gene_name=RNA5SP521;ID=NA12877_ch_T0001144;Name=RNA5SP521
NA12877_chrY	CAT	exon	18159693	18159808	.	+	.	source_transcript=ENST00000516203.1;source_transcript_name=RNA5SP521-201;source_gene=ENSG00000252012.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252012.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP521;alternative_source_transcripts=ENST00000516203.1;transcript_id=NA12877_ch_T0001144;gene_id=NA12877_ch_G0000382;Parent=NA12877_ch_T0001144;transcript_name=NA12877_ch_T0001144;gene_name=RNA5SP521;ID=exon:NA12877_ch_T0001144:0;Name=RNA5SP521;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18168882	18168971	.	-	.	source_gene_common_name=ENSG00000273966;source_gene=ENSG00000273966.1;alternative_source_transcripts=ENST00000615048.1;gene_id=NA12877_ch_G0000383;gene_biotype=misc_RNA;gene_name=ENSG00000273966;gene_sources=liftoff;ID=NA12877_ch_G0000383;Name=ENSG00000273966
NA12877_chrY	CAT	transcript	18168882	18168971	1000	-	.	source_transcript=ENST00000615048.1;source_transcript_name=ENST00000615048;source_gene=ENSG00000273966.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000273966.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000615048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615048.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273966;alternative_source_transcripts=ENST00000615048.1;transcript_id=NA12877_ch_T0001145;gene_id=NA12877_ch_G0000383;Parent=NA12877_ch_G0000383;transcript_name=NA12877_ch_T0001145;gene_name=ENSG00000273966;ID=NA12877_ch_T0001145;Name=ENSG00000273966
NA12877_chrY	CAT	exon	18168882	18168971	.	-	.	source_transcript=ENST00000615048.1;source_transcript_name=ENST00000615048;source_gene=ENSG00000273966.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000273966.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000615048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615048.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273966;alternative_source_transcripts=ENST00000615048.1;transcript_id=NA12877_ch_T0001145;gene_id=NA12877_ch_G0000383;Parent=NA12877_ch_T0001145;transcript_name=NA12877_ch_T0001145;gene_name=ENSG00000273966;ID=exon:NA12877_ch_T0001145:0;Name=ENSG00000273966;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18221164	18225747	.	-	.	source_gene_common_name=CLUHP2;source_gene=ENSG00000228945.3;gene_id=NA12877_ch_G0000384;gene_biotype=unprocessed_pseudogene;gene_name=CLUHP2;gene_sources=liftoff;ID=NA12877_ch_G0000384;Name=CLUHP2
NA12877_chrY	CAT	transcript	18221164	18225747	1000	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_G0000384;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=NA12877_ch_T0001164;Name=CLUHP2
NA12877_chrY	CAT	exon	18221164	18221291	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=exon:NA12877_ch_T0001164:0;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18221292	18221370	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=intron:NA12877_ch_T0001164:0;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18221371	18221454	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=exon:NA12877_ch_T0001164:1;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18221455	18221934	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=intron:NA12877_ch_T0001164:1;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18221935	18222033	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=exon:NA12877_ch_T0001164:2;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18222034	18222759	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=intron:NA12877_ch_T0001164:2;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18222760	18222813	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=exon:NA12877_ch_T0001164:3;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18222814	18223063	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=intron:NA12877_ch_T0001164:3;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18223064	18223135	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=exon:NA12877_ch_T0001164:4;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18223136	18223779	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=intron:NA12877_ch_T0001164:4;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18223780	18223887	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=exon:NA12877_ch_T0001164:5;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18223888	18224016	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=intron:NA12877_ch_T0001164:5;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18224017	18224162	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=exon:NA12877_ch_T0001164:6;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18224163	18224239	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=intron:NA12877_ch_T0001164:6;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18224240	18224679	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=exon:NA12877_ch_T0001164:7;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18224680	18225575	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=intron:NA12877_ch_T0001164:7;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18225576	18225747	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=NA12877_ch_T0001164;gene_id=NA12877_ch_G0000384;Parent=NA12877_ch_T0001164;transcript_name=NA12877_ch_T0001164;gene_name=CLUHP2;ID=exon:NA12877_ch_T0001164:8;Name=CLUHP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18228430	18229318	.	+	.	source_gene_common_name=TAF9P2;source_gene=ENSG00000229302.1;alternative_source_transcripts=ENST00000445421.1;gene_id=NA12877_ch_G0000385;gene_biotype=processed_pseudogene;gene_name=TAF9P2;gene_sources=liftoff;ID=NA12877_ch_G0000385;Name=TAF9P2
NA12877_chrY	CAT	transcript	18228430	18229318	1000	+	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000445421.1;transcript_id=NA12877_ch_T0001165;gene_id=NA12877_ch_G0000385;Parent=NA12877_ch_G0000385;transcript_name=NA12877_ch_T0001165;gene_name=TAF9P2;ID=NA12877_ch_T0001165;Name=TAF9P2
NA12877_chrY	CAT	exon	18228430	18228902	.	+	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000445421.1;transcript_id=NA12877_ch_T0001165;gene_id=NA12877_ch_G0000385;Parent=NA12877_ch_T0001165;transcript_name=NA12877_ch_T0001165;gene_name=TAF9P2;ID=exon:NA12877_ch_T0001165:0;Name=TAF9P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18228903	18229276	.	+	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000445421.1;transcript_id=NA12877_ch_T0001165;gene_id=NA12877_ch_G0000385;Parent=NA12877_ch_T0001165;transcript_name=NA12877_ch_T0001165;gene_name=TAF9P2;ID=intron:NA12877_ch_T0001165:0;Name=TAF9P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18229277	18229318	.	+	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000445421.1;transcript_id=NA12877_ch_T0001165;gene_id=NA12877_ch_G0000385;Parent=NA12877_ch_T0001165;transcript_name=NA12877_ch_T0001165;gene_name=TAF9P2;ID=exon:NA12877_ch_T0001165:1;Name=TAF9P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18302970	18329584	.	-	.	source_gene_common_name=ENSG00000310304;source_gene=ENSG00000310304.1;gene_id=NA12877_ch_G0000386;gene_biotype=lncRNA;gene_name=ENSG00000310304;gene_sources=liftoff;ID=NA12877_ch_G0000386;Name=ENSG00000310304
NA12877_chrY	CAT	transcript	18302970	18329542	1000	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001166;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_G0000386;transcript_name=NA12877_ch_T0001166;gene_name=ENSG00000310304;ID=NA12877_ch_T0001166;Name=ENSG00000310304
NA12877_chrY	CAT	exon	18302970	18303260	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001166;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001166;transcript_name=NA12877_ch_T0001166;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001166:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18303261	18304853	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001166;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001166;transcript_name=NA12877_ch_T0001166;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001166:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18304854	18304978	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001166;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001166;transcript_name=NA12877_ch_T0001166;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001166:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18304979	18305870	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001166;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001166;transcript_name=NA12877_ch_T0001166;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001166:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18305871	18306089	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001166;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001166;transcript_name=NA12877_ch_T0001166;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001166:2;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18306090	18329225	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001166;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001166;transcript_name=NA12877_ch_T0001166;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001166:2;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18329226	18329542	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001166;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001166;transcript_name=NA12877_ch_T0001166;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001166:3;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18313926	18329609	1000	-	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001167;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_G0000386;transcript_name=NA12877_ch_T0001167;gene_name=ENSG00000310304;ID=NA12877_ch_T0001167;Name=ENSG00000310304
NA12877_chrY	CAT	exon	18313926	18314969	.	-	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001167;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001167;transcript_name=NA12877_ch_T0001167;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001167:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18314970	18318657	.	-	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001167;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001167;transcript_name=NA12877_ch_T0001167;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001167:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18318658	18318782	.	-	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001167;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001167;transcript_name=NA12877_ch_T0001167;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001167:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18318783	18329225	.	-	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001167;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001167;transcript_name=NA12877_ch_T0001167;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001167:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18329226	18329609	.	-	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001167;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001167;transcript_name=NA12877_ch_T0001167;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001167:2;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18313929	18329582	1000	-	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001168;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_G0000386;transcript_name=NA12877_ch_T0001168;gene_name=ENSG00000310304;ID=NA12877_ch_T0001168;Name=ENSG00000310304
NA12877_chrY	CAT	exon	18313929	18314969	.	-	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001168;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001168;transcript_name=NA12877_ch_T0001168;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001168:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18314970	18329225	.	-	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001168;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001168;transcript_name=NA12877_ch_T0001168;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001168:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18329226	18329582	.	-	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001168;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001168;transcript_name=NA12877_ch_T0001168;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001168:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18313934	18329584	1000	-	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001169;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_G0000386;transcript_name=NA12877_ch_T0001169;gene_name=ENSG00000310304;ID=NA12877_ch_T0001169;Name=ENSG00000310304
NA12877_chrY	CAT	exon	18313934	18314969	.	-	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001169;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001169;transcript_name=NA12877_ch_T0001169;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001169:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18314970	18318657	.	-	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001169;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001169;transcript_name=NA12877_ch_T0001169;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001169:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18318658	18318782	.	-	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001169;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001169;transcript_name=NA12877_ch_T0001169;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001169:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18318783	18329294	.	-	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001169;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001169;transcript_name=NA12877_ch_T0001169;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001169:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18329295	18329584	.	-	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001169;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001169;transcript_name=NA12877_ch_T0001169;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001169:2;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18313934	18329584	1000	-	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001170;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_G0000386;transcript_name=NA12877_ch_T0001170;gene_name=ENSG00000310304;ID=NA12877_ch_T0001170;Name=ENSG00000310304
NA12877_chrY	CAT	exon	18313934	18314969	.	-	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001170;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001170;transcript_name=NA12877_ch_T0001170;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001170:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18314970	18318657	.	-	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001170;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001170;transcript_name=NA12877_ch_T0001170;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001170:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18318658	18318778	.	-	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001170;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001170;transcript_name=NA12877_ch_T0001170;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001170:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18318779	18329225	.	-	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001170;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001170;transcript_name=NA12877_ch_T0001170;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001170:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18329226	18329584	.	-	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001170;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001170;transcript_name=NA12877_ch_T0001170;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001170:2;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18314460	18329542	1000	-	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001171;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_G0000386;transcript_name=NA12877_ch_T0001171;gene_name=ENSG00000310304;ID=NA12877_ch_T0001171;Name=ENSG00000310304
NA12877_chrY	CAT	exon	18314460	18314969	.	-	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001171;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001171;transcript_name=NA12877_ch_T0001171;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001171:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18314970	18329294	.	-	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001171;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001171;transcript_name=NA12877_ch_T0001171;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001171:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18329295	18329542	.	-	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001171;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001171;transcript_name=NA12877_ch_T0001171;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001171:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18317486	18329667	1000	-	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=299.942;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001172;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_G0000386;transcript_name=NA12877_ch_T0001172;gene_name=ENSG00000310304;ID=NA12877_ch_T0001172;Name=ENSG00000310304
NA12877_chrY	CAT	exon	18317486	18318782	.	-	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001172;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001172;transcript_name=NA12877_ch_T0001172;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001172:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18318783	18329225	.	-	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001172;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001172;transcript_name=NA12877_ch_T0001172;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001172:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18329226	18329667	.	-	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001172;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001172;transcript_name=NA12877_ch_T0001172;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001172:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18317486	18329578	1000	-	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=299.937;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001173;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_G0000386;transcript_name=NA12877_ch_T0001173;gene_name=ENSG00000310304;ID=NA12877_ch_T0001173;Name=ENSG00000310304
NA12877_chrY	CAT	exon	18317486	18318782	.	-	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=299.937;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001173;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001173;transcript_name=NA12877_ch_T0001173;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001173:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18318783	18329294	.	-	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=299.937;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001173;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001173;transcript_name=NA12877_ch_T0001173;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001173:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18329295	18329578	.	-	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=299.937;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001173;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001173;transcript_name=NA12877_ch_T0001173;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001173:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18318622	18329573	1000	-	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001174;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_G0000386;transcript_name=NA12877_ch_T0001174;gene_name=ENSG00000310304;ID=NA12877_ch_T0001174;Name=ENSG00000310304
NA12877_chrY	CAT	exon	18318622	18318778	.	-	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001174;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001174;transcript_name=NA12877_ch_T0001174;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001174:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18318779	18329225	.	-	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001174;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001174;transcript_name=NA12877_ch_T0001174;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001174:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18329226	18329573	.	-	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001174;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001174;transcript_name=NA12877_ch_T0001174;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001174:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18323644	18329532	1000	-	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001176;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_G0000386;transcript_name=NA12877_ch_T0001176;gene_name=ENSG00000310304;ID=NA12877_ch_T0001176;Name=ENSG00000310304
NA12877_chrY	CAT	exon	18323644	18324277	.	-	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001176;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001176;transcript_name=NA12877_ch_T0001176;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001176:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18324278	18329225	.	-	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001176;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001176;transcript_name=NA12877_ch_T0001176;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001176:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18329226	18329532	.	-	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001176;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001176;transcript_name=NA12877_ch_T0001176;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001176:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18327075	18329581	1000	-	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001178;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_G0000386;transcript_name=NA12877_ch_T0001178;gene_name=ENSG00000310304;ID=NA12877_ch_T0001178;Name=ENSG00000310304
NA12877_chrY	CAT	exon	18327075	18327637	.	-	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001178;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001178;transcript_name=NA12877_ch_T0001178;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001178:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18327638	18329225	.	-	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001178;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001178;transcript_name=NA12877_ch_T0001178;gene_name=ENSG00000310304;ID=intron:NA12877_ch_T0001178:0;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18329226	18329581	.	-	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=NA12877_ch_T0001178;gene_id=NA12877_ch_G0000386;Parent=NA12877_ch_T0001178;transcript_name=NA12877_ch_T0001178;gene_name=ENSG00000310304;ID=exon:NA12877_ch_T0001178:1;Name=ENSG00000310304;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18321509	18323088	.	+	.	source_gene_common_name=CDY9P;source_gene=ENSG00000232899.1;alternative_source_transcripts=ENST00000411487.1;gene_id=NA12877_ch_G0000387;gene_biotype=unprocessed_pseudogene;gene_name=CDY9P;gene_sources=liftoff;ID=NA12877_ch_G0000387;Name=CDY9P
NA12877_chrY	CAT	transcript	18321509	18323088	1000	+	.	source_transcript=ENST00000451397.1;source_transcript_name=CDY9P-201;source_gene=ENSG00000232899.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232899.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451397.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY9P;alternative_source_transcripts=ENST00000411487.1;transcript_id=NA12877_ch_T0001175;gene_id=NA12877_ch_G0000387;Parent=NA12877_ch_G0000387;transcript_name=NA12877_ch_T0001175;gene_name=CDY9P;ID=NA12877_ch_T0001175;Name=CDY9P
NA12877_chrY	CAT	exon	18321509	18323088	.	+	.	source_transcript=ENST00000451397.1;source_transcript_name=CDY9P-201;source_gene=ENSG00000232899.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232899.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451397.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY9P;alternative_source_transcripts=ENST00000411487.1;transcript_id=NA12877_ch_T0001175;gene_id=NA12877_ch_G0000387;Parent=NA12877_ch_T0001175;transcript_name=NA12877_ch_T0001175;gene_name=CDY9P;ID=exon:NA12877_ch_T0001175:0;Name=CDY9P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18326663	18326991	.	+	.	source_gene_common_name=ELOCP26;source_gene=ENSG00000236599.1;alternative_source_transcripts=ENST00000425789.1;gene_id=NA12877_ch_G0000388;gene_biotype=processed_pseudogene;gene_name=ELOCP26;gene_sources=liftoff;ID=NA12877_ch_G0000388;Name=ELOCP26
NA12877_chrY	CAT	transcript	18326663	18326991	1000	+	.	source_transcript=ENST00000436067.1;source_transcript_name=ELOCP26-201;source_gene=ENSG00000236599.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236599.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436067.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP26;alternative_source_transcripts=ENST00000425789.1;transcript_id=NA12877_ch_T0001177;gene_id=NA12877_ch_G0000388;Parent=NA12877_ch_G0000388;transcript_name=NA12877_ch_T0001177;gene_name=ELOCP26;ID=NA12877_ch_T0001177;Name=ELOCP26
NA12877_chrY	CAT	exon	18326663	18326991	.	+	.	source_transcript=ENST00000436067.1;source_transcript_name=ELOCP26-201;source_gene=ENSG00000236599.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236599.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436067.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP26;alternative_source_transcripts=ENST00000425789.1;transcript_id=NA12877_ch_T0001177;gene_id=NA12877_ch_G0000388;Parent=NA12877_ch_T0001177;transcript_name=NA12877_ch_T0001177;gene_name=ELOCP26;ID=exon:NA12877_ch_T0001177:0;Name=ELOCP26;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18356905	18358029	.	-	.	source_gene_common_name=ACTG1P11;source_gene=ENSG00000229465.1;alternative_source_transcripts=ENST00000415776.1;gene_id=NA12877_ch_G0000389;gene_biotype=processed_pseudogene;gene_name=ACTG1P11;gene_sources=liftoff;ID=NA12877_ch_G0000389;Name=ACTG1P11
NA12877_chrY	CAT	transcript	18356905	18358029	1000	-	.	source_transcript=ENST00000425411.1;source_transcript_name=ACTG1P11-201;source_gene=ENSG00000229465.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229465.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425411.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425411.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P11;alternative_source_transcripts=ENST00000415776.1;transcript_id=NA12877_ch_T0001179;gene_id=NA12877_ch_G0000389;Parent=NA12877_ch_G0000389;transcript_name=NA12877_ch_T0001179;gene_name=ACTG1P11;ID=NA12877_ch_T0001179;Name=ACTG1P11
NA12877_chrY	CAT	exon	18356905	18358029	.	-	.	source_transcript=ENST00000425411.1;source_transcript_name=ACTG1P11-201;source_gene=ENSG00000229465.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229465.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425411.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425411.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P11;alternative_source_transcripts=ENST00000415776.1;transcript_id=NA12877_ch_T0001179;gene_id=NA12877_ch_G0000389;Parent=NA12877_ch_T0001179;transcript_name=NA12877_ch_T0001179;gene_name=ACTG1P11;ID=exon:NA12877_ch_T0001179:0;Name=ACTG1P11;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18368884	18370464	.	-	.	source_gene_common_name=XKRYP7;source_gene=ENSG00000290725.1;gene_id=NA12877_ch_G0000390;gene_biotype=lncRNA;gene_name=XKRYP7;gene_sources=liftoff;ID=NA12877_ch_G0000390;Name=XKRYP7
NA12877_chrY	CAT	transcript	18368884	18370464	1000	-	.	source_transcript=ENST00000623874.1;source_transcript_name=XKRYP7-202;source_gene=ENSG00000290725.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290725.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000623874.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000623874.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=NA12877_ch_T0001180;gene_id=NA12877_ch_G0000390;Parent=NA12877_ch_G0000390;transcript_name=NA12877_ch_T0001180;gene_name=XKRYP7;ID=NA12877_ch_T0001180;Name=XKRYP7
NA12877_chrY	CAT	exon	18368884	18370464	.	-	.	source_transcript=ENST00000623874.1;source_transcript_name=XKRYP7-202;source_gene=ENSG00000290725.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290725.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000623874.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000623874.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=NA12877_ch_T0001180;gene_id=NA12877_ch_G0000390;Parent=NA12877_ch_T0001180;transcript_name=NA12877_ch_T0001180;gene_name=XKRYP7;ID=exon:NA12877_ch_T0001180:0;Name=XKRYP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18369027	18377304	.	-	.	source_gene_common_name=XKRYP7;source_gene=ENSG00000244646.5;gene_id=NA12877_ch_G0000391;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XKRYP7;gene_sources=liftoff;ID=NA12877_ch_G0000391;Name=XKRYP7
NA12877_chrY	CAT	transcript	18369027	18377304	1000	-	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=NA12877_ch_T0001181;gene_id=NA12877_ch_G0000391;Parent=NA12877_ch_G0000391;transcript_name=NA12877_ch_T0001181;gene_name=XKRYP7;ID=NA12877_ch_T0001181;Name=XKRYP7
NA12877_chrY	CAT	exon	18369027	18369784	.	-	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=NA12877_ch_T0001181;gene_id=NA12877_ch_G0000391;Parent=NA12877_ch_T0001181;transcript_name=NA12877_ch_T0001181;gene_name=XKRYP7;ID=exon:NA12877_ch_T0001181:0;Name=XKRYP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18369785	18376969	.	-	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=NA12877_ch_T0001181;gene_id=NA12877_ch_G0000391;Parent=NA12877_ch_T0001181;transcript_name=NA12877_ch_T0001181;gene_name=XKRYP7;ID=intron:NA12877_ch_T0001181:0;Name=XKRYP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18376970	18377304	.	-	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=NA12877_ch_T0001181;gene_id=NA12877_ch_G0000391;Parent=NA12877_ch_T0001181;transcript_name=NA12877_ch_T0001181;gene_name=XKRYP7;ID=exon:NA12877_ch_T0001181:1;Name=XKRYP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18382115	18384719	.	+	.	source_gene_common_name=USP9YP16;source_gene=ENSG00000232744.1;gene_id=NA12877_ch_G0000392;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP16;gene_sources=liftoff;ID=NA12877_ch_G0000392;Name=USP9YP16
NA12877_chrY	CAT	transcript	18382115	18384719	1000	+	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;transcript_id=NA12877_ch_T0001182;gene_id=NA12877_ch_G0000392;Parent=NA12877_ch_G0000392;transcript_name=NA12877_ch_T0001182;gene_name=USP9YP16;ID=NA12877_ch_T0001182;Name=USP9YP16
NA12877_chrY	CAT	exon	18382115	18382240	.	+	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;transcript_id=NA12877_ch_T0001182;gene_id=NA12877_ch_G0000392;Parent=NA12877_ch_T0001182;transcript_name=NA12877_ch_T0001182;gene_name=USP9YP16;ID=exon:NA12877_ch_T0001182:0;Name=USP9YP16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18382241	18382813	.	+	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;transcript_id=NA12877_ch_T0001182;gene_id=NA12877_ch_G0000392;Parent=NA12877_ch_T0001182;transcript_name=NA12877_ch_T0001182;gene_name=USP9YP16;ID=intron:NA12877_ch_T0001182:0;Name=USP9YP16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18382814	18382905	.	+	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;transcript_id=NA12877_ch_T0001182;gene_id=NA12877_ch_G0000392;Parent=NA12877_ch_T0001182;transcript_name=NA12877_ch_T0001182;gene_name=USP9YP16;ID=exon:NA12877_ch_T0001182:1;Name=USP9YP16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18382906	18384530	.	+	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;transcript_id=NA12877_ch_T0001182;gene_id=NA12877_ch_G0000392;Parent=NA12877_ch_T0001182;transcript_name=NA12877_ch_T0001182;gene_name=USP9YP16;ID=intron:NA12877_ch_T0001182:1;Name=USP9YP16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18384531	18384719	.	+	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;transcript_id=NA12877_ch_T0001182;gene_id=NA12877_ch_G0000392;Parent=NA12877_ch_T0001182;transcript_name=NA12877_ch_T0001182;gene_name=USP9YP16;ID=exon:NA12877_ch_T0001182:2;Name=USP9YP16;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18388219	18389387	.	-	.	source_gene_common_name=USP9YP15;source_gene=ENSG00000233120.1;gene_id=NA12877_ch_G0000393;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP15;gene_sources=liftoff;ID=NA12877_ch_G0000393;Name=USP9YP15
NA12877_chrY	CAT	transcript	18388219	18389387	1000	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=NA12877_ch_T0001183;gene_id=NA12877_ch_G0000393;Parent=NA12877_ch_G0000393;transcript_name=NA12877_ch_T0001183;gene_name=USP9YP15;ID=NA12877_ch_T0001183;Name=USP9YP15
NA12877_chrY	CAT	exon	18388219	18388314	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=NA12877_ch_T0001183;gene_id=NA12877_ch_G0000393;Parent=NA12877_ch_T0001183;transcript_name=NA12877_ch_T0001183;gene_name=USP9YP15;ID=exon:NA12877_ch_T0001183:0;Name=USP9YP15;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18388315	18388694	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=NA12877_ch_T0001183;gene_id=NA12877_ch_G0000393;Parent=NA12877_ch_T0001183;transcript_name=NA12877_ch_T0001183;gene_name=USP9YP15;ID=intron:NA12877_ch_T0001183:0;Name=USP9YP15;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18388695	18388853	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=NA12877_ch_T0001183;gene_id=NA12877_ch_G0000393;Parent=NA12877_ch_T0001183;transcript_name=NA12877_ch_T0001183;gene_name=USP9YP15;ID=exon:NA12877_ch_T0001183:1;Name=USP9YP15;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18388854	18389065	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=NA12877_ch_T0001183;gene_id=NA12877_ch_G0000393;Parent=NA12877_ch_T0001183;transcript_name=NA12877_ch_T0001183;gene_name=USP9YP15;ID=intron:NA12877_ch_T0001183:1;Name=USP9YP15;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18389066	18389094	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=NA12877_ch_T0001183;gene_id=NA12877_ch_G0000393;Parent=NA12877_ch_T0001183;transcript_name=NA12877_ch_T0001183;gene_name=USP9YP15;ID=exon:NA12877_ch_T0001183:2;Name=USP9YP15;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18389095	18389249	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=NA12877_ch_T0001183;gene_id=NA12877_ch_G0000393;Parent=NA12877_ch_T0001183;transcript_name=NA12877_ch_T0001183;gene_name=USP9YP15;ID=intron:NA12877_ch_T0001183:2;Name=USP9YP15;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18389250	18389387	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=NA12877_ch_T0001183;gene_id=NA12877_ch_G0000393;Parent=NA12877_ch_T0001183;transcript_name=NA12877_ch_T0001183;gene_name=USP9YP15;ID=exon:NA12877_ch_T0001183:3;Name=USP9YP15;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18388907	18389066	.	-	.	source_gene_common_name=RNU1-95P;source_gene=ENSG00000252166.1;gene_id=NA12877_ch_G0000394;gene_biotype=snRNA;gene_name=RNU1-95P;gene_sources=liftoff;ID=NA12877_ch_G0000394;Name=RNU1-95P
NA12877_chrY	CAT	transcript	18388907	18389066	1000	-	.	source_transcript=ENST00000516357.1;source_transcript_name=RNU1-95P-201;source_gene=ENSG00000252166.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252166.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516357.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516357.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-95P;transcript_id=NA12877_ch_T0001184;gene_id=NA12877_ch_G0000394;Parent=NA12877_ch_G0000394;transcript_name=NA12877_ch_T0001184;gene_name=RNU1-95P;ID=NA12877_ch_T0001184;Name=RNU1-95P
NA12877_chrY	CAT	exon	18388907	18389066	.	-	.	source_transcript=ENST00000516357.1;source_transcript_name=RNU1-95P-201;source_gene=ENSG00000252166.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252166.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516357.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516357.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-95P;transcript_id=NA12877_ch_T0001184;gene_id=NA12877_ch_G0000394;Parent=NA12877_ch_T0001184;transcript_name=NA12877_ch_T0001184;gene_name=RNU1-95P;ID=exon:NA12877_ch_T0001184:0;Name=RNU1-95P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18397812	18400600	.	-	.	source_gene_common_name=TRAPPC2P8;source_gene=ENSG00000225895.1;gene_id=NA12877_ch_G0000395;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P8;gene_sources=liftoff;ID=NA12877_ch_G0000395;Name=TRAPPC2P8
NA12877_chrY	CAT	transcript	18397812	18400600	1000	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=NA12877_ch_T0001185;gene_id=NA12877_ch_G0000395;Parent=NA12877_ch_G0000395;transcript_name=NA12877_ch_T0001185;gene_name=TRAPPC2P8;ID=NA12877_ch_T0001185;Name=TRAPPC2P8
NA12877_chrY	CAT	exon	18397812	18397967	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=NA12877_ch_T0001185;gene_id=NA12877_ch_G0000395;Parent=NA12877_ch_T0001185;transcript_name=NA12877_ch_T0001185;gene_name=TRAPPC2P8;ID=exon:NA12877_ch_T0001185:0;Name=TRAPPC2P8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18397968	18398411	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=NA12877_ch_T0001185;gene_id=NA12877_ch_G0000395;Parent=NA12877_ch_T0001185;transcript_name=NA12877_ch_T0001185;gene_name=TRAPPC2P8;ID=intron:NA12877_ch_T0001185:0;Name=TRAPPC2P8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18398412	18398558	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=NA12877_ch_T0001185;gene_id=NA12877_ch_G0000395;Parent=NA12877_ch_T0001185;transcript_name=NA12877_ch_T0001185;gene_name=TRAPPC2P8;ID=exon:NA12877_ch_T0001185:1;Name=TRAPPC2P8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18398559	18400507	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=NA12877_ch_T0001185;gene_id=NA12877_ch_G0000395;Parent=NA12877_ch_T0001185;transcript_name=NA12877_ch_T0001185;gene_name=TRAPPC2P8;ID=intron:NA12877_ch_T0001185:1;Name=TRAPPC2P8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18400508	18400600	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=NA12877_ch_T0001185;gene_id=NA12877_ch_G0000395;Parent=NA12877_ch_T0001185;transcript_name=NA12877_ch_T0001185;gene_name=TRAPPC2P8;ID=exon:NA12877_ch_T0001185:2;Name=TRAPPC2P8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18409712	18425233	.	+	.	source_gene_common_name=OFD1P2Y;source_gene=ENSG00000226611.2;gene_id=NA12877_ch_G0000396;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P2Y;gene_sources=liftoff;ID=NA12877_ch_G0000396;Name=OFD1P2Y
NA12877_chrY	CAT	transcript	18409712	18425233	1000	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_G0000396;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=NA12877_ch_T0001186;Name=OFD1P2Y
NA12877_chrY	CAT	exon	18409712	18409809	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=exon:NA12877_ch_T0001186:0;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18409810	18411030	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=intron:NA12877_ch_T0001186:0;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18411031	18411231	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=exon:NA12877_ch_T0001186:1;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18411232	18413425	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=intron:NA12877_ch_T0001186:1;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18413426	18413493	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=exon:NA12877_ch_T0001186:2;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18413494	18413578	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=intron:NA12877_ch_T0001186:2;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18413579	18413609	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=exon:NA12877_ch_T0001186:3;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18413610	18415132	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=intron:NA12877_ch_T0001186:3;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18415133	18415269	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=exon:NA12877_ch_T0001186:4;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18415270	18415593	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=intron:NA12877_ch_T0001186:4;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18415594	18415740	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=exon:NA12877_ch_T0001186:5;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18415741	18418829	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=intron:NA12877_ch_T0001186:5;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18418830	18418935	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=exon:NA12877_ch_T0001186:6;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18418936	18420239	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=intron:NA12877_ch_T0001186:6;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18420240	18420358	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=exon:NA12877_ch_T0001186:7;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18420359	18422195	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=intron:NA12877_ch_T0001186:7;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18422196	18422269	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=exon:NA12877_ch_T0001186:8;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18422270	18423373	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=intron:NA12877_ch_T0001186:8;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18423374	18423441	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=exon:NA12877_ch_T0001186:9;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18423442	18425084	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=intron:NA12877_ch_T0001186:9;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18425085	18425233	.	+	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=NA12877_ch_T0001186;gene_id=NA12877_ch_G0000396;Parent=NA12877_ch_T0001186;transcript_name=NA12877_ch_T0001186;gene_name=OFD1P2Y;ID=exon:NA12877_ch_T0001186:10;Name=OFD1P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18417785	18449154	.	+	.	source_gene_common_name=ENSG00000297434;source_gene=ENSG00000297434.1;gene_id=NA12877_ch_G0000397;gene_biotype=lncRNA;gene_name=ENSG00000297434;gene_sources=liftoff;ID=NA12877_ch_G0000397;Name=ENSG00000297434
NA12877_chrY	CAT	transcript	18417785	18449154	1000	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_G0000397;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=NA12877_ch_T0001187;Name=ENSG00000297434
NA12877_chrY	CAT	exon	18417785	18417817	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001187:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18417818	18418532	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001187:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18418533	18418667	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001187:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18418668	18420239	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001187:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18420240	18420347	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001187:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18420348	18422195	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001187:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18422196	18422269	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001187:3;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18422270	18425084	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001187:3;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18425085	18425282	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001187:4;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18425283	18426594	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001187:4;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18426595	18426733	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001187:5;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18426734	18432178	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001187:5;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18432179	18432391	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001187:6;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18432392	18445319	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001187:6;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18445320	18445575	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001187:7;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18445576	18449035	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001187:7;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18449036	18449154	.	+	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001187;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001187;transcript_name=NA12877_ch_T0001187;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001187:8;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18417893	18426657	1000	+	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001188;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_G0000397;transcript_name=NA12877_ch_T0001188;gene_name=ENSG00000297434;ID=NA12877_ch_T0001188;Name=ENSG00000297434
NA12877_chrY	CAT	exon	18417893	18418222	.	+	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001188;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001188;transcript_name=NA12877_ch_T0001188;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001188:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18418223	18418532	.	+	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001188;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001188;transcript_name=NA12877_ch_T0001188;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001188:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18418533	18418667	.	+	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001188;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001188;transcript_name=NA12877_ch_T0001188;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001188:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18418668	18420239	.	+	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001188;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001188;transcript_name=NA12877_ch_T0001188;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001188:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18420240	18420347	.	+	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001188;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001188;transcript_name=NA12877_ch_T0001188;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001188:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18420348	18422195	.	+	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001188;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001188;transcript_name=NA12877_ch_T0001188;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001188:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18422196	18422269	.	+	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001188;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001188;transcript_name=NA12877_ch_T0001188;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001188:3;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18422270	18425084	.	+	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001188;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001188;transcript_name=NA12877_ch_T0001188;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001188:3;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18425085	18425286	.	+	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001188;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001188;transcript_name=NA12877_ch_T0001188;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001188:4;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18425287	18426594	.	+	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001188;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001188;transcript_name=NA12877_ch_T0001188;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001188:4;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18426595	18426657	.	+	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001188;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001188;transcript_name=NA12877_ch_T0001188;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001188:5;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18418340	18420434	1000	+	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001189;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_G0000397;transcript_name=NA12877_ch_T0001189;gene_name=ENSG00000297434;ID=NA12877_ch_T0001189;Name=ENSG00000297434
NA12877_chrY	CAT	exon	18418340	18418423	.	+	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001189;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001189;transcript_name=NA12877_ch_T0001189;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001189:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18418424	18418526	.	+	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001189;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001189;transcript_name=NA12877_ch_T0001189;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001189:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18418527	18418667	.	+	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001189;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001189;transcript_name=NA12877_ch_T0001189;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001189:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18418668	18420239	.	+	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001189;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001189;transcript_name=NA12877_ch_T0001189;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001189:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18420240	18420434	.	+	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001189;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001189;transcript_name=NA12877_ch_T0001189;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001189:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18418350	18426656	1000	+	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001190;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_G0000397;transcript_name=NA12877_ch_T0001190;gene_name=ENSG00000297434;ID=NA12877_ch_T0001190;Name=ENSG00000297434
NA12877_chrY	CAT	exon	18418350	18418667	.	+	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001190;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001190;transcript_name=NA12877_ch_T0001190;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001190:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18418668	18420239	.	+	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001190;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001190;transcript_name=NA12877_ch_T0001190;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001190:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18420240	18420358	.	+	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001190;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001190;transcript_name=NA12877_ch_T0001190;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001190:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18420359	18422195	.	+	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001190;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001190;transcript_name=NA12877_ch_T0001190;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001190:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18422196	18422269	.	+	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001190;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001190;transcript_name=NA12877_ch_T0001190;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001190:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18422270	18425084	.	+	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001190;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001190;transcript_name=NA12877_ch_T0001190;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001190:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18425085	18425282	.	+	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001190;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001190;transcript_name=NA12877_ch_T0001190;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001190:3;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18425283	18426594	.	+	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001190;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001190;transcript_name=NA12877_ch_T0001190;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001190:3;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18426595	18426656	.	+	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001190;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001190;transcript_name=NA12877_ch_T0001190;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001190:4;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18418548	18420431	1000	+	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001191;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_G0000397;transcript_name=NA12877_ch_T0001191;gene_name=ENSG00000297434;ID=NA12877_ch_T0001191;Name=ENSG00000297434
NA12877_chrY	CAT	exon	18418548	18418667	.	+	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001191;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001191;transcript_name=NA12877_ch_T0001191;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001191:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18418668	18420239	.	+	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001191;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001191;transcript_name=NA12877_ch_T0001191;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001191:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18420240	18420431	.	+	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001191;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001191;transcript_name=NA12877_ch_T0001191;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001191:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18419850	18426657	1000	+	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001192;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_G0000397;transcript_name=NA12877_ch_T0001192;gene_name=ENSG00000297434;ID=NA12877_ch_T0001192;Name=ENSG00000297434
NA12877_chrY	CAT	exon	18419850	18419967	.	+	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001192;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001192;transcript_name=NA12877_ch_T0001192;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001192:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18419968	18420239	.	+	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001192;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001192;transcript_name=NA12877_ch_T0001192;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001192:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18420240	18420347	.	+	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001192;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001192;transcript_name=NA12877_ch_T0001192;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001192:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18420348	18422195	.	+	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001192;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001192;transcript_name=NA12877_ch_T0001192;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001192:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18422196	18422269	.	+	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001192;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001192;transcript_name=NA12877_ch_T0001192;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001192:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18422270	18425084	.	+	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001192;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001192;transcript_name=NA12877_ch_T0001192;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001192:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18425085	18425286	.	+	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001192;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001192;transcript_name=NA12877_ch_T0001192;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001192:3;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18425287	18426594	.	+	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001192;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001192;transcript_name=NA12877_ch_T0001192;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001192:3;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18426595	18426657	.	+	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001192;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001192;transcript_name=NA12877_ch_T0001192;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001192:4;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18419855	18426655	1000	+	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001193;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_G0000397;transcript_name=NA12877_ch_T0001193;gene_name=ENSG00000297434;ID=NA12877_ch_T0001193;Name=ENSG00000297434
NA12877_chrY	CAT	exon	18419855	18419967	.	+	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001193;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001193;transcript_name=NA12877_ch_T0001193;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001193:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18419968	18420239	.	+	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001193;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001193;transcript_name=NA12877_ch_T0001193;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001193:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18420240	18420358	.	+	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001193;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001193;transcript_name=NA12877_ch_T0001193;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001193:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18420359	18422195	.	+	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001193;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001193;transcript_name=NA12877_ch_T0001193;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001193:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18422196	18422269	.	+	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001193;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001193;transcript_name=NA12877_ch_T0001193;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001193:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18422270	18425084	.	+	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001193;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001193;transcript_name=NA12877_ch_T0001193;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001193:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18425085	18425286	.	+	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001193;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001193;transcript_name=NA12877_ch_T0001193;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001193:3;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18425287	18426594	.	+	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001193;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001193;transcript_name=NA12877_ch_T0001193;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001193:3;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18426595	18426655	.	+	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001193;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001193;transcript_name=NA12877_ch_T0001193;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001193:4;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18419855	18426654	1000	+	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001194;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_G0000397;transcript_name=NA12877_ch_T0001194;gene_name=ENSG00000297434;ID=NA12877_ch_T0001194;Name=ENSG00000297434
NA12877_chrY	CAT	exon	18419855	18419967	.	+	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001194;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001194;transcript_name=NA12877_ch_T0001194;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001194:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18419968	18420239	.	+	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001194;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001194;transcript_name=NA12877_ch_T0001194;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001194:0;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18420240	18420347	.	+	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001194;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001194;transcript_name=NA12877_ch_T0001194;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001194:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18420348	18422195	.	+	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001194;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001194;transcript_name=NA12877_ch_T0001194;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001194:1;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18422196	18422269	.	+	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001194;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001194;transcript_name=NA12877_ch_T0001194;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001194:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18422270	18423373	.	+	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001194;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001194;transcript_name=NA12877_ch_T0001194;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001194:2;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18423374	18423441	.	+	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001194;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001194;transcript_name=NA12877_ch_T0001194;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001194:3;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18423442	18425084	.	+	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001194;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001194;transcript_name=NA12877_ch_T0001194;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001194:3;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18425085	18425286	.	+	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001194;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001194;transcript_name=NA12877_ch_T0001194;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001194:4;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18425287	18426594	.	+	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001194;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001194;transcript_name=NA12877_ch_T0001194;gene_name=ENSG00000297434;ID=intron:NA12877_ch_T0001194:4;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18426595	18426654	.	+	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=NA12877_ch_T0001194;gene_id=NA12877_ch_G0000397;Parent=NA12877_ch_T0001194;transcript_name=NA12877_ch_T0001194;gene_name=ENSG00000297434;ID=exon:NA12877_ch_T0001194:5;Name=ENSG00000297434;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18437108	18437435	.	-	.	source_gene_common_name=ELOCP12;source_gene=ENSG00000230412.1;alternative_source_transcripts=ENST00000429066.1;gene_id=NA12877_ch_G0000398;gene_biotype=processed_pseudogene;gene_name=ELOCP12;gene_sources=liftoff;ID=NA12877_ch_G0000398;Name=ELOCP12
NA12877_chrY	CAT	transcript	18437108	18437435	1000	-	.	source_transcript=ENST00000458706.1;source_transcript_name=ELOCP12-201;source_gene=ENSG00000230412.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230412.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458706.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP12;alternative_source_transcripts=ENST00000429066.1;transcript_id=NA12877_ch_T0001195;gene_id=NA12877_ch_G0000398;Parent=NA12877_ch_G0000398;transcript_name=NA12877_ch_T0001195;gene_name=ELOCP12;ID=NA12877_ch_T0001195;Name=ELOCP12
NA12877_chrY	CAT	exon	18437108	18437435	.	-	.	source_transcript=ENST00000458706.1;source_transcript_name=ELOCP12-201;source_gene=ENSG00000230412.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230412.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458706.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP12;alternative_source_transcripts=ENST00000429066.1;transcript_id=NA12877_ch_T0001195;gene_id=NA12877_ch_G0000398;Parent=NA12877_ch_T0001195;transcript_name=NA12877_ch_T0001195;gene_name=ELOCP12;ID=exon:NA12877_ch_T0001195:0;Name=ELOCP12;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18478171	18480131	.	-	.	source_gene_common_name=CDY2B;source_gene=ENSG00000129873.8;alternative_source_transcripts=ENST00000382867.4,ENST00000382867.4;gene_id=NA12877_ch_G0000399;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=liftoff;ID=NA12877_ch_G0000399;Name=CDY2B
NA12877_chrY	CAT	transcript	18478171	18480131	100	-	.	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4,ENST00000382867.4;transcript_id=NA12877_ch_T0001196;gene_id=NA12877_ch_G0000399;Parent=NA12877_ch_G0000399;transcript_name=NA12877_ch_T0001196;gene_name=CDY2B;ID=NA12877_ch_T0001196;Name=CDY2B
NA12877_chrY	CAT	exon	18478171	18480131	.	-	.	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4,ENST00000382867.4;transcript_id=NA12877_ch_T0001196;gene_id=NA12877_ch_G0000399;Parent=NA12877_ch_T0001196;transcript_name=NA12877_ch_T0001196;gene_name=CDY2B;ID=exon:NA12877_ch_T0001196:0;Name=CDY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	18478178	18479803	.	-	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4,ENST00000382867.4;transcript_id=NA12877_ch_T0001196;gene_id=NA12877_ch_G0000399;Parent=NA12877_ch_T0001196;transcript_name=NA12877_ch_T0001196;gene_name=CDY2B;ID=CDS:NA12877_ch_T0001196:0;Name=CDY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	18478178	18478180	.	-	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4,ENST00000382867.4;transcript_id=NA12877_ch_T0001196;gene_id=NA12877_ch_G0000399;Parent=NA12877_ch_T0001196;transcript_name=NA12877_ch_T0001196;gene_name=CDY2B;ID=stop_codon:NA12877_ch_T0001196;Name=CDY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	18479801	18479803	.	-	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4,ENST00000382867.4;transcript_id=NA12877_ch_T0001196;gene_id=NA12877_ch_G0000399;Parent=NA12877_ch_T0001196;transcript_name=NA12877_ch_T0001196;gene_name=CDY2B;ID=start_codon:NA12877_ch_T0001196;Name=CDY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18482010	18483619	.	-	.	source_gene_common_name=CDY6P;source_gene=ENSG00000229138.1;alternative_source_transcripts=ENST00000413320.1;gene_id=NA12877_ch_G0000400;gene_biotype=unprocessed_pseudogene;gene_name=CDY6P;gene_sources=liftoff;ID=NA12877_ch_G0000400;Name=CDY6P
NA12877_chrY	CAT	transcript	18482010	18483619	1000	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1;transcript_id=NA12877_ch_T0001197;gene_id=NA12877_ch_G0000400;Parent=NA12877_ch_G0000400;transcript_name=NA12877_ch_T0001197;gene_name=CDY6P;ID=NA12877_ch_T0001197;Name=CDY6P
NA12877_chrY	CAT	exon	18482010	18483209	.	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1;transcript_id=NA12877_ch_T0001197;gene_id=NA12877_ch_G0000400;Parent=NA12877_ch_T0001197;transcript_name=NA12877_ch_T0001197;gene_name=CDY6P;ID=exon:NA12877_ch_T0001197:0;Name=CDY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18483210	18483553	.	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1;transcript_id=NA12877_ch_T0001197;gene_id=NA12877_ch_G0000400;Parent=NA12877_ch_T0001197;transcript_name=NA12877_ch_T0001197;gene_name=CDY6P;ID=intron:NA12877_ch_T0001197:0;Name=CDY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18483554	18483619	.	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1;transcript_id=NA12877_ch_T0001197;gene_id=NA12877_ch_G0000400;Parent=NA12877_ch_T0001197;transcript_name=NA12877_ch_T0001197;gene_name=CDY6P;ID=exon:NA12877_ch_T0001197:1;Name=CDY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18508665	18510713	.	+	.	source_gene_common_name=USP9YP7;source_gene=ENSG00000224485.1;alternative_source_transcripts=ENST00000436723.1;gene_id=NA12877_ch_G0000401;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP7;gene_sources=liftoff;ID=NA12877_ch_G0000401;Name=USP9YP7
NA12877_chrY	CAT	transcript	18508665	18510713	1000	+	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1;transcript_id=NA12877_ch_T0001198;gene_id=NA12877_ch_G0000401;Parent=NA12877_ch_G0000401;transcript_name=NA12877_ch_T0001198;gene_name=USP9YP7;ID=NA12877_ch_T0001198;Name=USP9YP7
NA12877_chrY	CAT	exon	18508665	18508885	.	+	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1;transcript_id=NA12877_ch_T0001198;gene_id=NA12877_ch_G0000401;Parent=NA12877_ch_T0001198;transcript_name=NA12877_ch_T0001198;gene_name=USP9YP7;ID=exon:NA12877_ch_T0001198:0;Name=USP9YP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18508886	18510504	.	+	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1;transcript_id=NA12877_ch_T0001198;gene_id=NA12877_ch_G0000401;Parent=NA12877_ch_T0001198;transcript_name=NA12877_ch_T0001198;gene_name=USP9YP7;ID=intron:NA12877_ch_T0001198:0;Name=USP9YP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18510505	18510713	.	+	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1;transcript_id=NA12877_ch_T0001198;gene_id=NA12877_ch_G0000401;Parent=NA12877_ch_T0001198;transcript_name=NA12877_ch_T0001198;gene_name=USP9YP7;ID=exon:NA12877_ch_T0001198:1;Name=USP9YP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18512630	18521541	.	-	.	source_gene_common_name=USP9YP34;source_gene=ENSG00000233378.1;gene_id=NA12877_ch_G0000402;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP34;gene_sources=liftoff;ID=NA12877_ch_G0000402;Name=USP9YP34
NA12877_chrY	CAT	transcript	18512630	18521541	1000	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=NA12877_ch_T0001199;gene_id=NA12877_ch_G0000402;Parent=NA12877_ch_G0000402;transcript_name=NA12877_ch_T0001199;gene_name=USP9YP34;ID=NA12877_ch_T0001199;Name=USP9YP34
NA12877_chrY	CAT	exon	18512630	18512722	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=NA12877_ch_T0001199;gene_id=NA12877_ch_G0000402;Parent=NA12877_ch_T0001199;transcript_name=NA12877_ch_T0001199;gene_name=USP9YP34;ID=exon:NA12877_ch_T0001199:0;Name=USP9YP34;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18512723	18514864	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=NA12877_ch_T0001199;gene_id=NA12877_ch_G0000402;Parent=NA12877_ch_T0001199;transcript_name=NA12877_ch_T0001199;gene_name=USP9YP34;ID=intron:NA12877_ch_T0001199:0;Name=USP9YP34;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18514865	18514949	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=NA12877_ch_T0001199;gene_id=NA12877_ch_G0000402;Parent=NA12877_ch_T0001199;transcript_name=NA12877_ch_T0001199;gene_name=USP9YP34;ID=exon:NA12877_ch_T0001199:1;Name=USP9YP34;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18514950	18516944	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=NA12877_ch_T0001199;gene_id=NA12877_ch_G0000402;Parent=NA12877_ch_T0001199;transcript_name=NA12877_ch_T0001199;gene_name=USP9YP34;ID=intron:NA12877_ch_T0001199:1;Name=USP9YP34;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18516945	18517134	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=NA12877_ch_T0001199;gene_id=NA12877_ch_G0000402;Parent=NA12877_ch_T0001199;transcript_name=NA12877_ch_T0001199;gene_name=USP9YP34;ID=exon:NA12877_ch_T0001199:2;Name=USP9YP34;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18517135	18518934	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=NA12877_ch_T0001199;gene_id=NA12877_ch_G0000402;Parent=NA12877_ch_T0001199;transcript_name=NA12877_ch_T0001199;gene_name=USP9YP34;ID=intron:NA12877_ch_T0001199:2;Name=USP9YP34;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18518935	18519153	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=NA12877_ch_T0001199;gene_id=NA12877_ch_G0000402;Parent=NA12877_ch_T0001199;transcript_name=NA12877_ch_T0001199;gene_name=USP9YP34;ID=exon:NA12877_ch_T0001199:3;Name=USP9YP34;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18519154	18521320	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=NA12877_ch_T0001199;gene_id=NA12877_ch_G0000402;Parent=NA12877_ch_T0001199;transcript_name=NA12877_ch_T0001199;gene_name=USP9YP34;ID=intron:NA12877_ch_T0001199:3;Name=USP9YP34;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18521321	18521541	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=NA12877_ch_T0001199;gene_id=NA12877_ch_G0000402;Parent=NA12877_ch_T0001199;transcript_name=NA12877_ch_T0001199;gene_name=USP9YP34;ID=exon:NA12877_ch_T0001199:4;Name=USP9YP34;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18552390	18554301	.	-	.	source_gene_common_name=CDY7P;source_gene=ENSG00000237558.1;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;gene_id=NA12877_ch_G0000403;gene_biotype=unprocessed_pseudogene;gene_name=CDY7P;gene_sources=liftoff;ID=NA12877_ch_G0000403;Name=CDY7P
NA12877_chrY	CAT	transcript	18552390	18554301	1000	-	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=NA12877_ch_T0001200;gene_id=NA12877_ch_G0000403;Parent=NA12877_ch_G0000403;transcript_name=NA12877_ch_T0001200;gene_name=CDY7P;ID=NA12877_ch_T0001200;Name=CDY7P
NA12877_chrY	CAT	exon	18552390	18553828	.	-	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=NA12877_ch_T0001200;gene_id=NA12877_ch_G0000403;Parent=NA12877_ch_T0001200;transcript_name=NA12877_ch_T0001200;gene_name=CDY7P;ID=exon:NA12877_ch_T0001200:0;Name=CDY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18553829	18554136	.	-	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=NA12877_ch_T0001200;gene_id=NA12877_ch_G0000403;Parent=NA12877_ch_T0001200;transcript_name=NA12877_ch_T0001200;gene_name=CDY7P;ID=intron:NA12877_ch_T0001200:0;Name=CDY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18554137	18554301	.	-	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=NA12877_ch_T0001200;gene_id=NA12877_ch_G0000403;Parent=NA12877_ch_T0001200;transcript_name=NA12877_ch_T0001200;gene_name=CDY7P;ID=exon:NA12877_ch_T0001200:1;Name=CDY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18584265	18593199	.	+	.	source_gene_common_name=USP9YP6;source_gene=ENSG00000226116.1;gene_id=NA12877_ch_G0000404;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP6;gene_sources=liftoff;ID=NA12877_ch_G0000404;Name=USP9YP6
NA12877_chrY	CAT	transcript	18584265	18593199	1000	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;transcript_id=NA12877_ch_T0001201;gene_id=NA12877_ch_G0000404;Parent=NA12877_ch_G0000404;transcript_name=NA12877_ch_T0001201;gene_name=USP9YP6;ID=NA12877_ch_T0001201;Name=USP9YP6
NA12877_chrY	CAT	exon	18584265	18584486	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;transcript_id=NA12877_ch_T0001201;gene_id=NA12877_ch_G0000404;Parent=NA12877_ch_T0001201;transcript_name=NA12877_ch_T0001201;gene_name=USP9YP6;ID=exon:NA12877_ch_T0001201:0;Name=USP9YP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18584487	18586649	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;transcript_id=NA12877_ch_T0001201;gene_id=NA12877_ch_G0000404;Parent=NA12877_ch_T0001201;transcript_name=NA12877_ch_T0001201;gene_name=USP9YP6;ID=intron:NA12877_ch_T0001201:0;Name=USP9YP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18586650	18586870	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;transcript_id=NA12877_ch_T0001201;gene_id=NA12877_ch_G0000404;Parent=NA12877_ch_T0001201;transcript_name=NA12877_ch_T0001201;gene_name=USP9YP6;ID=exon:NA12877_ch_T0001201:1;Name=USP9YP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18586871	18588670	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;transcript_id=NA12877_ch_T0001201;gene_id=NA12877_ch_G0000404;Parent=NA12877_ch_T0001201;transcript_name=NA12877_ch_T0001201;gene_name=USP9YP6;ID=intron:NA12877_ch_T0001201:1;Name=USP9YP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18588671	18588871	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;transcript_id=NA12877_ch_T0001201;gene_id=NA12877_ch_G0000404;Parent=NA12877_ch_T0001201;transcript_name=NA12877_ch_T0001201;gene_name=USP9YP6;ID=exon:NA12877_ch_T0001201:2;Name=USP9YP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18588872	18590855	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;transcript_id=NA12877_ch_T0001201;gene_id=NA12877_ch_G0000404;Parent=NA12877_ch_T0001201;transcript_name=NA12877_ch_T0001201;gene_name=USP9YP6;ID=intron:NA12877_ch_T0001201:2;Name=USP9YP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18590856	18590940	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;transcript_id=NA12877_ch_T0001201;gene_id=NA12877_ch_G0000404;Parent=NA12877_ch_T0001201;transcript_name=NA12877_ch_T0001201;gene_name=USP9YP6;ID=exon:NA12877_ch_T0001201:3;Name=USP9YP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18590941	18593074	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;transcript_id=NA12877_ch_T0001201;gene_id=NA12877_ch_G0000404;Parent=NA12877_ch_T0001201;transcript_name=NA12877_ch_T0001201;gene_name=USP9YP6;ID=intron:NA12877_ch_T0001201:3;Name=USP9YP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18593075	18593199	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;transcript_id=NA12877_ch_T0001201;gene_id=NA12877_ch_G0000404;Parent=NA12877_ch_T0001201;transcript_name=NA12877_ch_T0001201;gene_name=USP9YP6;ID=exon:NA12877_ch_T0001201:4;Name=USP9YP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18595116	18597167	.	-	.	source_gene_common_name=USP9YP32;source_gene=ENSG00000237616.1;alternative_source_transcripts=ENST00000452432.1;gene_id=NA12877_ch_G0000405;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP32;gene_sources=liftoff;ID=NA12877_ch_G0000405;Name=USP9YP32
NA12877_chrY	CAT	transcript	18595116	18597167	1000	-	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000452432.1;transcript_id=NA12877_ch_T0001202;gene_id=NA12877_ch_G0000405;Parent=NA12877_ch_G0000405;transcript_name=NA12877_ch_T0001202;gene_name=USP9YP32;ID=NA12877_ch_T0001202;Name=USP9YP32
NA12877_chrY	CAT	exon	18595116	18595324	.	-	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000452432.1;transcript_id=NA12877_ch_T0001202;gene_id=NA12877_ch_G0000405;Parent=NA12877_ch_T0001202;transcript_name=NA12877_ch_T0001202;gene_name=USP9YP32;ID=exon:NA12877_ch_T0001202:0;Name=USP9YP32;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18595325	18596946	.	-	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000452432.1;transcript_id=NA12877_ch_T0001202;gene_id=NA12877_ch_G0000405;Parent=NA12877_ch_T0001202;transcript_name=NA12877_ch_T0001202;gene_name=USP9YP32;ID=intron:NA12877_ch_T0001202:0;Name=USP9YP32;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18596947	18597167	.	-	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000452432.1;transcript_id=NA12877_ch_T0001202;gene_id=NA12877_ch_G0000405;Parent=NA12877_ch_T0001202;transcript_name=NA12877_ch_T0001202;gene_name=USP9YP32;ID=exon:NA12877_ch_T0001202:1;Name=USP9YP32;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18622215	18623824	.	+	.	source_gene_common_name=CDY8P;source_gene=ENSG00000224033.1;alternative_source_transcripts=ENST00000428380.1;gene_id=NA12877_ch_G0000406;gene_biotype=unprocessed_pseudogene;gene_name=CDY8P;gene_sources=liftoff;ID=NA12877_ch_G0000406;Name=CDY8P
NA12877_chrY	CAT	transcript	18622215	18623824	1000	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1;transcript_id=NA12877_ch_T0001203;gene_id=NA12877_ch_G0000406;Parent=NA12877_ch_G0000406;transcript_name=NA12877_ch_T0001203;gene_name=CDY8P;ID=NA12877_ch_T0001203;Name=CDY8P
NA12877_chrY	CAT	exon	18622215	18622280	.	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1;transcript_id=NA12877_ch_T0001203;gene_id=NA12877_ch_G0000406;Parent=NA12877_ch_T0001203;transcript_name=NA12877_ch_T0001203;gene_name=CDY8P;ID=exon:NA12877_ch_T0001203:0;Name=CDY8P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18622281	18622611	.	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1;transcript_id=NA12877_ch_T0001203;gene_id=NA12877_ch_G0000406;Parent=NA12877_ch_T0001203;transcript_name=NA12877_ch_T0001203;gene_name=CDY8P;ID=intron:NA12877_ch_T0001203:0;Name=CDY8P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18622612	18623824	.	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1;transcript_id=NA12877_ch_T0001203;gene_id=NA12877_ch_G0000406;Parent=NA12877_ch_T0001203;transcript_name=NA12877_ch_T0001203;gene_name=CDY8P;ID=exon:NA12877_ch_T0001203:1;Name=CDY8P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18625703	18627662	.	+	.	source_gene_common_name=CDY2A;source_gene=ENSG00000182415.11;alternative_source_transcripts=ENST00000250838.6,ENST00000250838.6;gene_id=NA12877_ch_G0000407;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=liftoff;ID=NA12877_ch_G0000407;Name=CDY2A
NA12877_chrY	CAT	transcript	18625703	18627662	100	+	.	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6,ENST00000250838.6;transcript_id=NA12877_ch_T0001204;gene_id=NA12877_ch_G0000407;Parent=NA12877_ch_G0000407;transcript_name=NA12877_ch_T0001204;gene_name=CDY2A;ID=NA12877_ch_T0001204;Name=CDY2A
NA12877_chrY	CAT	exon	18625703	18627662	.	+	.	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6,ENST00000250838.6;transcript_id=NA12877_ch_T0001204;gene_id=NA12877_ch_G0000407;Parent=NA12877_ch_T0001204;transcript_name=NA12877_ch_T0001204;gene_name=CDY2A;ID=exon:NA12877_ch_T0001204:0;Name=CDY2A;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	18626031	18627656	.	+	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6,ENST00000250838.6;transcript_id=NA12877_ch_T0001204;gene_id=NA12877_ch_G0000407;Parent=NA12877_ch_T0001204;transcript_name=NA12877_ch_T0001204;gene_name=CDY2A;ID=CDS:NA12877_ch_T0001204:0;Name=CDY2A;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	18626031	18626033	.	+	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6,ENST00000250838.6;transcript_id=NA12877_ch_T0001204;gene_id=NA12877_ch_G0000407;Parent=NA12877_ch_T0001204;transcript_name=NA12877_ch_T0001204;gene_name=CDY2A;ID=start_codon:NA12877_ch_T0001204;Name=CDY2A;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	18627654	18627656	.	+	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6,ENST00000250838.6;transcript_id=NA12877_ch_T0001204;gene_id=NA12877_ch_G0000407;Parent=NA12877_ch_T0001204;transcript_name=NA12877_ch_T0001204;gene_name=CDY2A;ID=stop_codon:NA12877_ch_T0001204;Name=CDY2A;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18668393	18668720	.	+	.	source_gene_common_name=ELOCP6;source_gene=ENSG00000225740.1;alternative_source_transcripts=ENST00000458706.1;gene_id=NA12877_ch_G0000408;gene_biotype=processed_pseudogene;gene_name=ELOCP6;gene_sources=liftoff;ID=NA12877_ch_G0000408;Name=ELOCP6
NA12877_chrY	CAT	transcript	18668393	18668720	1000	+	.	source_transcript=ENST00000429066.1;source_transcript_name=ELOCP6-201;source_gene=ENSG00000225740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000429066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429066.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP6;alternative_source_transcripts=ENST00000458706.1;transcript_id=NA12877_ch_T0001205;gene_id=NA12877_ch_G0000408;Parent=NA12877_ch_G0000408;transcript_name=NA12877_ch_T0001205;gene_name=ELOCP6;ID=NA12877_ch_T0001205;Name=ELOCP6
NA12877_chrY	CAT	exon	18668393	18668720	.	+	.	source_transcript=ENST00000429066.1;source_transcript_name=ELOCP6-201;source_gene=ENSG00000225740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000429066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429066.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP6;alternative_source_transcripts=ENST00000458706.1;transcript_id=NA12877_ch_T0001205;gene_id=NA12877_ch_G0000408;Parent=NA12877_ch_T0001205;transcript_name=NA12877_ch_T0001205;gene_name=ELOCP6;ID=exon:NA12877_ch_T0001205:0;Name=ELOCP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18680602	18696125	.	-	.	source_gene_common_name=OFD1P1Y;source_gene=ENSG00000226011.1;gene_id=NA12877_ch_G0000409;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P1Y;gene_sources=liftoff;ID=NA12877_ch_G0000409;Name=OFD1P1Y
NA12877_chrY	CAT	transcript	18680602	18696125	1000	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_G0000409;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=NA12877_ch_T0001206;Name=OFD1P1Y
NA12877_chrY	CAT	exon	18680602	18680750	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=exon:NA12877_ch_T0001206:0;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18680751	18682370	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=intron:NA12877_ch_T0001206:0;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18682371	18682462	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=exon:NA12877_ch_T0001206:1;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18682463	18683566	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=intron:NA12877_ch_T0001206:1;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18683567	18683640	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=exon:NA12877_ch_T0001206:2;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18683641	18685477	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=intron:NA12877_ch_T0001206:2;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18685478	18685597	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=exon:NA12877_ch_T0001206:3;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18685598	18686900	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=intron:NA12877_ch_T0001206:3;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18686901	18687006	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=exon:NA12877_ch_T0001206:4;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18687007	18690095	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=intron:NA12877_ch_T0001206:4;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18690096	18690242	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=exon:NA12877_ch_T0001206:5;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18690243	18690566	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=intron:NA12877_ch_T0001206:5;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18690567	18690703	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=exon:NA12877_ch_T0001206:6;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18690704	18692226	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=intron:NA12877_ch_T0001206:6;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18692227	18692257	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=exon:NA12877_ch_T0001206:7;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18692258	18692342	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=intron:NA12877_ch_T0001206:7;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18692343	18692410	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=exon:NA12877_ch_T0001206:8;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18692411	18694604	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=intron:NA12877_ch_T0001206:8;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18694605	18694805	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=exon:NA12877_ch_T0001206:9;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18694806	18696025	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=intron:NA12877_ch_T0001206:9;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18696026	18696125	.	-	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=NA12877_ch_T0001206;gene_id=NA12877_ch_G0000409;Parent=NA12877_ch_T0001206;transcript_name=NA12877_ch_T0001206;gene_name=OFD1P1Y;ID=exon:NA12877_ch_T0001206:10;Name=OFD1P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18680604	18687496	.	-	.	source_gene_common_name=ENSG00000300757;source_gene=ENSG00000300757.1;gene_id=NA12877_ch_G0000410;gene_biotype=lncRNA;gene_name=ENSG00000300757;gene_sources=liftoff;ID=NA12877_ch_G0000410;Name=ENSG00000300757
NA12877_chrY	CAT	transcript	18680604	18685986	1000	-	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001207;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_G0000410;transcript_name=NA12877_ch_T0001207;gene_name=ENSG00000300757;ID=NA12877_ch_T0001207;Name=ENSG00000300757
NA12877_chrY	CAT	exon	18680604	18680750	.	-	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001207;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001207;transcript_name=NA12877_ch_T0001207;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001207:0;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18680751	18683566	.	-	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001207;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001207;transcript_name=NA12877_ch_T0001207;gene_name=ENSG00000300757;ID=intron:NA12877_ch_T0001207:0;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18683567	18683640	.	-	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001207;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001207;transcript_name=NA12877_ch_T0001207;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001207:1;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18683641	18685452	.	-	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001207;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001207;transcript_name=NA12877_ch_T0001207;gene_name=ENSG00000300757;ID=intron:NA12877_ch_T0001207:1;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18685453	18685596	.	-	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001207;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001207;transcript_name=NA12877_ch_T0001207;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001207:2;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18685597	18685868	.	-	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001207;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001207;transcript_name=NA12877_ch_T0001207;gene_name=ENSG00000300757;ID=intron:NA12877_ch_T0001207:2;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18685869	18685986	.	-	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001207;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001207;transcript_name=NA12877_ch_T0001207;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001207:3;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18680711	18685981	1000	-	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001208;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_G0000410;transcript_name=NA12877_ch_T0001208;gene_name=ENSG00000300757;ID=NA12877_ch_T0001208;Name=ENSG00000300757
NA12877_chrY	CAT	exon	18680711	18680750	.	-	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001208;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001208;transcript_name=NA12877_ch_T0001208;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001208:0;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18680751	18683566	.	-	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001208;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001208;transcript_name=NA12877_ch_T0001208;gene_name=ENSG00000300757;ID=intron:NA12877_ch_T0001208:0;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18683567	18683640	.	-	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001208;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001208;transcript_name=NA12877_ch_T0001208;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001208:1;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18683641	18684007	.	-	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001208;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001208;transcript_name=NA12877_ch_T0001208;gene_name=ENSG00000300757;ID=intron:NA12877_ch_T0001208:1;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18684008	18684083	.	-	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001208;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001208;transcript_name=NA12877_ch_T0001208;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001208:2;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18684084	18685477	.	-	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001208;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001208;transcript_name=NA12877_ch_T0001208;gene_name=ENSG00000300757;ID=intron:NA12877_ch_T0001208:2;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18685478	18685596	.	-	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001208;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001208;transcript_name=NA12877_ch_T0001208;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001208:3;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18685597	18685868	.	-	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001208;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001208;transcript_name=NA12877_ch_T0001208;gene_name=ENSG00000300757;ID=intron:NA12877_ch_T0001208:3;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18685869	18685981	.	-	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001208;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001208;transcript_name=NA12877_ch_T0001208;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001208:4;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18685402	18687496	1000	-	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001209;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_G0000410;transcript_name=NA12877_ch_T0001209;gene_name=ENSG00000300757;ID=NA12877_ch_T0001209;Name=ENSG00000300757
NA12877_chrY	CAT	exon	18685402	18685596	.	-	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001209;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001209;transcript_name=NA12877_ch_T0001209;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001209:0;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18685597	18687168	.	-	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001209;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001209;transcript_name=NA12877_ch_T0001209;gene_name=ENSG00000300757;ID=intron:NA12877_ch_T0001209:0;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18687169	18687309	.	-	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001209;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001209;transcript_name=NA12877_ch_T0001209;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001209:1;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18687310	18687412	.	-	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001209;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001209;transcript_name=NA12877_ch_T0001209;gene_name=ENSG00000300757;ID=intron:NA12877_ch_T0001209:1;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18687413	18687496	.	-	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001209;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001209;transcript_name=NA12877_ch_T0001209;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001209:2;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18685405	18687288	1000	-	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001210;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_G0000410;transcript_name=NA12877_ch_T0001210;gene_name=ENSG00000300757;ID=NA12877_ch_T0001210;Name=ENSG00000300757
NA12877_chrY	CAT	exon	18685405	18685596	.	-	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001210;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001210;transcript_name=NA12877_ch_T0001210;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001210:0;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18685597	18687168	.	-	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001210;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001210;transcript_name=NA12877_ch_T0001210;gene_name=ENSG00000300757;ID=intron:NA12877_ch_T0001210:0;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18687169	18687288	.	-	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=NA12877_ch_T0001210;gene_id=NA12877_ch_G0000410;Parent=NA12877_ch_T0001210;transcript_name=NA12877_ch_T0001210;gene_name=ENSG00000300757;ID=exon:NA12877_ch_T0001210:1;Name=ENSG00000300757;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18705236	18707949	.	+	.	source_gene_common_name=TRAPPC2P3;source_gene=ENSG00000224964.1;gene_id=NA12877_ch_G0000411;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P3;gene_sources=liftoff;ID=NA12877_ch_G0000411;Name=TRAPPC2P3
NA12877_chrY	CAT	transcript	18705236	18707949	1000	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;transcript_id=NA12877_ch_T0001211;gene_id=NA12877_ch_G0000411;Parent=NA12877_ch_G0000411;transcript_name=NA12877_ch_T0001211;gene_name=TRAPPC2P3;ID=NA12877_ch_T0001211;Name=TRAPPC2P3
NA12877_chrY	CAT	exon	18705236	18705328	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;transcript_id=NA12877_ch_T0001211;gene_id=NA12877_ch_G0000411;Parent=NA12877_ch_T0001211;transcript_name=NA12877_ch_T0001211;gene_name=TRAPPC2P3;ID=exon:NA12877_ch_T0001211:0;Name=TRAPPC2P3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18705329	18707280	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;transcript_id=NA12877_ch_T0001211;gene_id=NA12877_ch_G0000411;Parent=NA12877_ch_T0001211;transcript_name=NA12877_ch_T0001211;gene_name=TRAPPC2P3;ID=intron:NA12877_ch_T0001211:0;Name=TRAPPC2P3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18707281	18707422	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;transcript_id=NA12877_ch_T0001211;gene_id=NA12877_ch_G0000411;Parent=NA12877_ch_T0001211;transcript_name=NA12877_ch_T0001211;gene_name=TRAPPC2P3;ID=exon:NA12877_ch_T0001211:1;Name=TRAPPC2P3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18707423	18707863	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;transcript_id=NA12877_ch_T0001211;gene_id=NA12877_ch_G0000411;Parent=NA12877_ch_T0001211;transcript_name=NA12877_ch_T0001211;gene_name=TRAPPC2P3;ID=intron:NA12877_ch_T0001211:1;Name=TRAPPC2P3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18707864	18707949	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;transcript_id=NA12877_ch_T0001211;gene_id=NA12877_ch_G0000411;Parent=NA12877_ch_T0001211;transcript_name=NA12877_ch_T0001211;gene_name=TRAPPC2P3;ID=exon:NA12877_ch_T0001211:2;Name=TRAPPC2P3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18716448	18717617	.	+	.	source_gene_common_name=USP9YP27;source_gene=ENSG00000235521.1;gene_id=NA12877_ch_G0000412;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP27;gene_sources=liftoff;ID=NA12877_ch_G0000412;Name=USP9YP27
NA12877_chrY	CAT	transcript	18716448	18717617	1000	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=NA12877_ch_T0001212;gene_id=NA12877_ch_G0000412;Parent=NA12877_ch_G0000412;transcript_name=NA12877_ch_T0001212;gene_name=USP9YP27;ID=NA12877_ch_T0001212;Name=USP9YP27
NA12877_chrY	CAT	exon	18716448	18716589	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=NA12877_ch_T0001212;gene_id=NA12877_ch_G0000412;Parent=NA12877_ch_T0001212;transcript_name=NA12877_ch_T0001212;gene_name=USP9YP27;ID=exon:NA12877_ch_T0001212:0;Name=USP9YP27;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18716590	18716741	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=NA12877_ch_T0001212;gene_id=NA12877_ch_G0000412;Parent=NA12877_ch_T0001212;transcript_name=NA12877_ch_T0001212;gene_name=USP9YP27;ID=intron:NA12877_ch_T0001212:0;Name=USP9YP27;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18716742	18716770	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=NA12877_ch_T0001212;gene_id=NA12877_ch_G0000412;Parent=NA12877_ch_T0001212;transcript_name=NA12877_ch_T0001212;gene_name=USP9YP27;ID=exon:NA12877_ch_T0001212:1;Name=USP9YP27;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18716771	18716970	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=NA12877_ch_T0001212;gene_id=NA12877_ch_G0000412;Parent=NA12877_ch_T0001212;transcript_name=NA12877_ch_T0001212;gene_name=USP9YP27;ID=intron:NA12877_ch_T0001212:1;Name=USP9YP27;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18716971	18717141	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=NA12877_ch_T0001212;gene_id=NA12877_ch_G0000412;Parent=NA12877_ch_T0001212;transcript_name=NA12877_ch_T0001212;gene_name=USP9YP27;ID=exon:NA12877_ch_T0001212:2;Name=USP9YP27;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18717142	18717521	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=NA12877_ch_T0001212;gene_id=NA12877_ch_G0000412;Parent=NA12877_ch_T0001212;transcript_name=NA12877_ch_T0001212;gene_name=USP9YP27;ID=intron:NA12877_ch_T0001212:2;Name=USP9YP27;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18717522	18717617	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=NA12877_ch_T0001212;gene_id=NA12877_ch_G0000412;Parent=NA12877_ch_T0001212;transcript_name=NA12877_ch_T0001212;gene_name=USP9YP27;ID=exon:NA12877_ch_T0001212:3;Name=USP9YP27;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18716770	18716929	.	+	.	source_gene_common_name=RNU1-128P;source_gene=ENSG00000252513.1;gene_id=NA12877_ch_G0000413;gene_biotype=snRNA;gene_name=RNU1-128P;gene_sources=liftoff;ID=NA12877_ch_G0000413;Name=RNU1-128P
NA12877_chrY	CAT	transcript	18716770	18716929	1000	+	.	source_transcript=ENST00000516704.1;source_transcript_name=RNU1-128P-201;source_gene=ENSG00000252513.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252513.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516704.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-128P;transcript_id=NA12877_ch_T0001213;gene_id=NA12877_ch_G0000413;Parent=NA12877_ch_G0000413;transcript_name=NA12877_ch_T0001213;gene_name=RNU1-128P;ID=NA12877_ch_T0001213;Name=RNU1-128P
NA12877_chrY	CAT	exon	18716770	18716929	.	+	.	source_transcript=ENST00000516704.1;source_transcript_name=RNU1-128P-201;source_gene=ENSG00000252513.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252513.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-128P;transcript_id=NA12877_ch_T0001213;gene_id=NA12877_ch_G0000413;Parent=NA12877_ch_T0001213;transcript_name=NA12877_ch_T0001213;gene_name=RNU1-128P;ID=exon:NA12877_ch_T0001213:0;Name=RNU1-128P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18721117	18723722	.	-	.	source_gene_common_name=USP9YP23;source_gene=ENSG00000223555.1;gene_id=NA12877_ch_G0000414;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP23;gene_sources=liftoff;ID=NA12877_ch_G0000414;Name=USP9YP23
NA12877_chrY	CAT	transcript	18721117	18723722	1000	-	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;transcript_id=NA12877_ch_T0001214;gene_id=NA12877_ch_G0000414;Parent=NA12877_ch_G0000414;transcript_name=NA12877_ch_T0001214;gene_name=USP9YP23;ID=NA12877_ch_T0001214;Name=USP9YP23
NA12877_chrY	CAT	exon	18721117	18721305	.	-	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;transcript_id=NA12877_ch_T0001214;gene_id=NA12877_ch_G0000414;Parent=NA12877_ch_T0001214;transcript_name=NA12877_ch_T0001214;gene_name=USP9YP23;ID=exon:NA12877_ch_T0001214:0;Name=USP9YP23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18721306	18722930	.	-	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;transcript_id=NA12877_ch_T0001214;gene_id=NA12877_ch_G0000414;Parent=NA12877_ch_T0001214;transcript_name=NA12877_ch_T0001214;gene_name=USP9YP23;ID=intron:NA12877_ch_T0001214:0;Name=USP9YP23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18722931	18723022	.	-	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;transcript_id=NA12877_ch_T0001214;gene_id=NA12877_ch_G0000414;Parent=NA12877_ch_T0001214;transcript_name=NA12877_ch_T0001214;gene_name=USP9YP23;ID=exon:NA12877_ch_T0001214:1;Name=USP9YP23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18723023	18723596	.	-	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;transcript_id=NA12877_ch_T0001214;gene_id=NA12877_ch_G0000414;Parent=NA12877_ch_T0001214;transcript_name=NA12877_ch_T0001214;gene_name=USP9YP23;ID=intron:NA12877_ch_T0001214:1;Name=USP9YP23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18723597	18723722	.	-	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;transcript_id=NA12877_ch_T0001214;gene_id=NA12877_ch_G0000414;Parent=NA12877_ch_T0001214;transcript_name=NA12877_ch_T0001214;gene_name=USP9YP23;ID=exon:NA12877_ch_T0001214:2;Name=USP9YP23;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18728532	18736816	.	+	.	source_gene_common_name=XKRY;source_gene=ENSG00000250868.5;gene_id=NA12877_ch_G0000415;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XKRY;gene_sources=liftoff;ID=NA12877_ch_G0000415;Name=XKRY
NA12877_chrY	CAT	transcript	18728532	18736816	1000	+	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=NA12877_ch_T0001215;gene_id=NA12877_ch_G0000415;Parent=NA12877_ch_G0000415;transcript_name=NA12877_ch_T0001215;gene_name=XKRY;ID=NA12877_ch_T0001215;Name=XKRY
NA12877_chrY	CAT	exon	18728532	18728866	.	+	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=NA12877_ch_T0001215;gene_id=NA12877_ch_G0000415;Parent=NA12877_ch_T0001215;transcript_name=NA12877_ch_T0001215;gene_name=XKRY;ID=exon:NA12877_ch_T0001215:0;Name=XKRY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18728867	18736051	.	+	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=NA12877_ch_T0001215;gene_id=NA12877_ch_G0000415;Parent=NA12877_ch_T0001215;transcript_name=NA12877_ch_T0001215;gene_name=XKRY;ID=intron:NA12877_ch_T0001215:0;Name=XKRY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18736052	18736816	.	+	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=NA12877_ch_T0001215;gene_id=NA12877_ch_G0000415;Parent=NA12877_ch_T0001215;transcript_name=NA12877_ch_T0001215;gene_name=XKRY;ID=exon:NA12877_ch_T0001215:1;Name=XKRY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18735372	18736952	.	+	.	source_gene_common_name=XKRY;source_gene=ENSG00000290724.1;gene_id=NA12877_ch_G0000416;gene_biotype=lncRNA;gene_name=XKRY;gene_sources=liftoff;ID=NA12877_ch_G0000416;Name=XKRY
NA12877_chrY	CAT	transcript	18735372	18736952	1000	+	.	source_transcript=ENST00000624960.1;source_transcript_name=XKRY-202;source_gene=ENSG00000290724.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290724.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000624960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000624960.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=NA12877_ch_T0001216;gene_id=NA12877_ch_G0000416;Parent=NA12877_ch_G0000416;transcript_name=NA12877_ch_T0001216;gene_name=XKRY;ID=NA12877_ch_T0001216;Name=XKRY
NA12877_chrY	CAT	exon	18735372	18736952	.	+	.	source_transcript=ENST00000624960.1;source_transcript_name=XKRY-202;source_gene=ENSG00000290724.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290724.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000624960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000624960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=NA12877_ch_T0001216;gene_id=NA12877_ch_G0000416;Parent=NA12877_ch_T0001216;transcript_name=NA12877_ch_T0001216;gene_name=XKRY;ID=exon:NA12877_ch_T0001216:0;Name=XKRY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18747807	18748931	.	+	.	source_gene_common_name=ACTG1P2;source_gene=ENSG00000229129.1;alternative_source_transcripts=ENST00000425411.1;gene_id=NA12877_ch_G0000417;gene_biotype=processed_pseudogene;gene_name=ACTG1P2;gene_sources=liftoff;ID=NA12877_ch_G0000417;Name=ACTG1P2
NA12877_chrY	CAT	transcript	18747807	18748931	1000	+	.	source_transcript=ENST00000415776.1;source_transcript_name=ACTG1P2-201;source_gene=ENSG00000229129.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229129.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415776.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P2;alternative_source_transcripts=ENST00000425411.1;transcript_id=NA12877_ch_T0001217;gene_id=NA12877_ch_G0000417;Parent=NA12877_ch_G0000417;transcript_name=NA12877_ch_T0001217;gene_name=ACTG1P2;ID=NA12877_ch_T0001217;Name=ACTG1P2
NA12877_chrY	CAT	exon	18747807	18748931	.	+	.	source_transcript=ENST00000415776.1;source_transcript_name=ACTG1P2-201;source_gene=ENSG00000229129.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229129.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415776.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P2;alternative_source_transcripts=ENST00000425411.1;transcript_id=NA12877_ch_T0001217;gene_id=NA12877_ch_G0000417;Parent=NA12877_ch_T0001217;transcript_name=NA12877_ch_T0001217;gene_name=ACTG1P2;ID=exon:NA12877_ch_T0001217:0;Name=ACTG1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18776176	18802871	.	+	.	source_gene_common_name=ENSG00000298004;source_gene=ENSG00000298004.1;alternative_source_transcripts=ENST00000848900.1;gene_id=NA12877_ch_G0000418;gene_biotype=lncRNA;gene_name=ENSG00000298004;gene_sources=liftoff;ID=NA12877_ch_G0000418;Name=ENSG00000298004
NA12877_chrY	CAT	transcript	18776176	18788357	1000	+	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848900.1;transcript_id=NA12877_ch_T0001218;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_G0000418;transcript_name=NA12877_ch_T0001218;gene_name=ENSG00000298004;ID=NA12877_ch_T0001218;Name=ENSG00000298004
NA12877_chrY	CAT	exon	18776176	18776617	.	+	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848900.1;transcript_id=NA12877_ch_T0001218;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001218;transcript_name=NA12877_ch_T0001218;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001218:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18776618	18787060	.	+	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848900.1;transcript_id=NA12877_ch_T0001218;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001218;transcript_name=NA12877_ch_T0001218;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001218:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18787061	18788357	.	+	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848900.1;transcript_id=NA12877_ch_T0001218;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001218;transcript_name=NA12877_ch_T0001218;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001218:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18776214	18791915	1000	+	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001219;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_G0000418;transcript_name=NA12877_ch_T0001219;gene_name=ENSG00000298004;ID=NA12877_ch_T0001219;Name=ENSG00000298004
NA12877_chrY	CAT	exon	18776214	18776617	.	+	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001219;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001219;transcript_name=NA12877_ch_T0001219;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001219:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18776618	18787060	.	+	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001219;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001219;transcript_name=NA12877_ch_T0001219;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001219:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18787061	18787185	.	+	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001219;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001219;transcript_name=NA12877_ch_T0001219;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001219:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18787186	18790871	.	+	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001219;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001219;transcript_name=NA12877_ch_T0001219;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001219:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18790872	18791915	.	+	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001219;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001219;transcript_name=NA12877_ch_T0001219;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001219:2;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18776264	18791907	1000	+	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001220;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_G0000418;transcript_name=NA12877_ch_T0001220;gene_name=ENSG00000298004;ID=NA12877_ch_T0001220;Name=ENSG00000298004
NA12877_chrY	CAT	exon	18776264	18776548	.	+	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001220;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001220;transcript_name=NA12877_ch_T0001220;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001220:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18776549	18787060	.	+	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001220;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001220;transcript_name=NA12877_ch_T0001220;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001220:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18787061	18787185	.	+	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001220;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001220;transcript_name=NA12877_ch_T0001220;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001220:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18787186	18790871	.	+	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001220;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001220;transcript_name=NA12877_ch_T0001220;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001220:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18790872	18791907	.	+	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001220;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001220;transcript_name=NA12877_ch_T0001220;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001220:2;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18776264	18791912	1000	+	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001221;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_G0000418;transcript_name=NA12877_ch_T0001221;gene_name=ENSG00000298004;ID=NA12877_ch_T0001221;Name=ENSG00000298004
NA12877_chrY	CAT	exon	18776264	18776617	.	+	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001221;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001221;transcript_name=NA12877_ch_T0001221;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001221:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18776618	18790871	.	+	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001221;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001221;transcript_name=NA12877_ch_T0001221;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001221:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18790872	18791912	.	+	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001221;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001221;transcript_name=NA12877_ch_T0001221;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001221:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18776264	18778769	1000	+	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001222;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_G0000418;transcript_name=NA12877_ch_T0001222;gene_name=ENSG00000298004;ID=NA12877_ch_T0001222;Name=ENSG00000298004
NA12877_chrY	CAT	exon	18776264	18776617	.	+	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001222;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001222;transcript_name=NA12877_ch_T0001222;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001222:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18776618	18778205	.	+	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001222;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001222;transcript_name=NA12877_ch_T0001222;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001222:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18778206	18778769	.	+	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001222;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001222;transcript_name=NA12877_ch_T0001222;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001222:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18776270	18791907	1000	+	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001223;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_G0000418;transcript_name=NA12877_ch_T0001223;gene_name=ENSG00000298004;ID=NA12877_ch_T0001223;Name=ENSG00000298004
NA12877_chrY	CAT	exon	18776270	18776617	.	+	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001223;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001223;transcript_name=NA12877_ch_T0001223;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001223:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18776618	18787064	.	+	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001223;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001223;transcript_name=NA12877_ch_T0001223;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001223:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18787065	18787185	.	+	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001223;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001223;transcript_name=NA12877_ch_T0001223;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001223:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18787186	18790871	.	+	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001223;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001223;transcript_name=NA12877_ch_T0001223;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001223:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18790872	18791907	.	+	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001223;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001223;transcript_name=NA12877_ch_T0001223;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001223:2;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18776274	18787224	1000	+	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001224;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_G0000418;transcript_name=NA12877_ch_T0001224;gene_name=ENSG00000298004;ID=NA12877_ch_T0001224;Name=ENSG00000298004
NA12877_chrY	CAT	exon	18776274	18776617	.	+	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001224;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001224;transcript_name=NA12877_ch_T0001224;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001224:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18776618	18787064	.	+	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001224;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001224;transcript_name=NA12877_ch_T0001224;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001224:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18787065	18787224	.	+	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001224;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001224;transcript_name=NA12877_ch_T0001224;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001224:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18776274	18791376	1000	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001225;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_G0000418;transcript_name=NA12877_ch_T0001225;gene_name=ENSG00000298004;ID=NA12877_ch_T0001225;Name=ENSG00000298004
NA12877_chrY	CAT	exon	18776274	18776617	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001225;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001225;transcript_name=NA12877_ch_T0001225;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001225:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18776618	18787060	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001225;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001225;transcript_name=NA12877_ch_T0001225;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001225:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18787061	18787185	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001225;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001225;transcript_name=NA12877_ch_T0001225;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001225:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18787186	18790204	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001225;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001225;transcript_name=NA12877_ch_T0001225;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001225:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18790205	18790256	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001225;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001225;transcript_name=NA12877_ch_T0001225;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001225:2;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18790257	18790871	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001225;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001225;transcript_name=NA12877_ch_T0001225;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001225:2;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18790872	18791376	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001225;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001225;transcript_name=NA12877_ch_T0001225;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001225:3;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18776290	18788508	1000	+	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001226;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_G0000418;transcript_name=NA12877_ch_T0001226;gene_name=ENSG00000298004;ID=NA12877_ch_T0001226;Name=ENSG00000298004
NA12877_chrY	CAT	exon	18776290	18776548	.	+	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001226;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001226;transcript_name=NA12877_ch_T0001226;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001226:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18776549	18787060	.	+	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001226;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001226;transcript_name=NA12877_ch_T0001226;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001226:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18787061	18788508	.	+	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001226;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001226;transcript_name=NA12877_ch_T0001226;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001226:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18776301	18802871	1000	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=NA12877_ch_T0001227;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_G0000418;transcript_name=NA12877_ch_T0001227;gene_name=ENSG00000298004;ID=NA12877_ch_T0001227;Name=ENSG00000298004
NA12877_chrY	CAT	exon	18776301	18776617	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=NA12877_ch_T0001227;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001227;transcript_name=NA12877_ch_T0001227;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001227:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18776618	18799751	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=NA12877_ch_T0001227;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001227;transcript_name=NA12877_ch_T0001227;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001227:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18799752	18799970	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=NA12877_ch_T0001227;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001227;transcript_name=NA12877_ch_T0001227;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001227:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18799971	18800862	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=NA12877_ch_T0001227;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001227;transcript_name=NA12877_ch_T0001227;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001227:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18800863	18800987	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=NA12877_ch_T0001227;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001227;transcript_name=NA12877_ch_T0001227;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001227:2;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18800988	18802580	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=NA12877_ch_T0001227;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001227;transcript_name=NA12877_ch_T0001227;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001227:2;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18802581	18802871	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=NA12877_ch_T0001227;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001227;transcript_name=NA12877_ch_T0001227;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001227:3;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18776301	18791379	1000	+	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001228;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_G0000418;transcript_name=NA12877_ch_T0001228;gene_name=ENSG00000298004;ID=NA12877_ch_T0001228;Name=ENSG00000298004
NA12877_chrY	CAT	exon	18776301	18776548	.	+	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001228;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001228;transcript_name=NA12877_ch_T0001228;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001228:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18776549	18790871	.	+	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001228;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001228;transcript_name=NA12877_ch_T0001228;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001228:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18790872	18791379	.	+	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=NA12877_ch_T0001228;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001228;transcript_name=NA12877_ch_T0001228;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001228:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18776311	18782199	1000	+	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848903.1;transcript_id=NA12877_ch_T0001229;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_G0000418;transcript_name=NA12877_ch_T0001229;gene_name=ENSG00000298004;ID=NA12877_ch_T0001229;Name=ENSG00000298004
NA12877_chrY	CAT	exon	18776311	18776617	.	+	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848903.1;transcript_id=NA12877_ch_T0001229;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001229;transcript_name=NA12877_ch_T0001229;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001229:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18776618	18781565	.	+	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848903.1;transcript_id=NA12877_ch_T0001229;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001229;transcript_name=NA12877_ch_T0001229;gene_name=ENSG00000298004;ID=intron:NA12877_ch_T0001229:0;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18781566	18782199	.	+	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848903.1;transcript_id=NA12877_ch_T0001229;gene_id=NA12877_ch_G0000418;Parent=NA12877_ch_T0001229;transcript_name=NA12877_ch_T0001229;gene_name=ENSG00000298004;ID=exon:NA12877_ch_T0001229:1;Name=ENSG00000298004;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18778852	18779180	.	-	.	source_gene_common_name=ELOCP36;source_gene=ENSG00000225896.1;alternative_source_transcripts=ENST00000436067.1;gene_id=NA12877_ch_G0000419;gene_biotype=processed_pseudogene;gene_name=ELOCP36;gene_sources=liftoff;ID=NA12877_ch_G0000419;Name=ELOCP36
NA12877_chrY	CAT	transcript	18778852	18779180	1000	-	.	source_transcript=ENST00000425789.1;source_transcript_name=ELOCP36-201;source_gene=ENSG00000225896.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225896.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425789.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP36;alternative_source_transcripts=ENST00000436067.1;transcript_id=NA12877_ch_T0001230;gene_id=NA12877_ch_G0000419;Parent=NA12877_ch_G0000419;transcript_name=NA12877_ch_T0001230;gene_name=ELOCP36;ID=NA12877_ch_T0001230;Name=ELOCP36
NA12877_chrY	CAT	exon	18778852	18779180	.	-	.	source_transcript=ENST00000425789.1;source_transcript_name=ELOCP36-201;source_gene=ENSG00000225896.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225896.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425789.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP36;alternative_source_transcripts=ENST00000436067.1;transcript_id=NA12877_ch_T0001230;gene_id=NA12877_ch_G0000419;Parent=NA12877_ch_T0001230;transcript_name=NA12877_ch_T0001230;gene_name=ELOCP36;ID=exon:NA12877_ch_T0001230:0;Name=ELOCP36;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18782755	18784334	.	-	.	source_gene_common_name=CDY5P;source_gene=ENSG00000226449.1;alternative_source_transcripts=ENST00000451397.1;gene_id=NA12877_ch_G0000420;gene_biotype=unprocessed_pseudogene;gene_name=CDY5P;gene_sources=liftoff;ID=NA12877_ch_G0000420;Name=CDY5P
NA12877_chrY	CAT	transcript	18782755	18784334	1000	-	.	source_transcript=ENST00000411487.1;source_transcript_name=CDY5P-201;source_gene=ENSG00000226449.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226449.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411487.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY5P;alternative_source_transcripts=ENST00000451397.1;transcript_id=NA12877_ch_T0001231;gene_id=NA12877_ch_G0000420;Parent=NA12877_ch_G0000420;transcript_name=NA12877_ch_T0001231;gene_name=CDY5P;ID=NA12877_ch_T0001231;Name=CDY5P
NA12877_chrY	CAT	exon	18782755	18784334	.	-	.	source_transcript=ENST00000411487.1;source_transcript_name=CDY5P-201;source_gene=ENSG00000226449.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226449.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411487.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY5P;alternative_source_transcripts=ENST00000451397.1;transcript_id=NA12877_ch_T0001231;gene_id=NA12877_ch_G0000420;Parent=NA12877_ch_T0001231;transcript_name=NA12877_ch_T0001231;gene_name=CDY5P;ID=exon:NA12877_ch_T0001231:0;Name=CDY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18797747	18799964	.	+	.	source_gene_common_name=ENSG00000275578;source_gene=ENSG00000275578.1;alternative_source_transcripts=ENST00000618226.1;gene_id=NA12877_ch_G0000421;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000275578;gene_sources=liftoff;ID=NA12877_ch_G0000421;Name=ENSG00000275578
NA12877_chrY	CAT	transcript	18797747	18799964	1000	+	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;alternative_source_transcripts=ENST00000618226.1;transcript_id=NA12877_ch_T0001232;gene_id=NA12877_ch_G0000421;Parent=NA12877_ch_G0000421;transcript_name=NA12877_ch_T0001232;gene_name=ENSG00000275578;ID=NA12877_ch_T0001232;Name=ENSG00000275578
NA12877_chrY	CAT	exon	18797747	18797933	.	+	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;alternative_source_transcripts=ENST00000618226.1;transcript_id=NA12877_ch_T0001232;gene_id=NA12877_ch_G0000421;Parent=NA12877_ch_T0001232;transcript_name=NA12877_ch_T0001232;gene_name=ENSG00000275578;ID=exon:NA12877_ch_T0001232:0;Name=ENSG00000275578;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18797934	18799753	.	+	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;alternative_source_transcripts=ENST00000618226.1;transcript_id=NA12877_ch_T0001232;gene_id=NA12877_ch_G0000421;Parent=NA12877_ch_T0001232;transcript_name=NA12877_ch_T0001232;gene_name=ENSG00000275578;ID=intron:NA12877_ch_T0001232:0;Name=ENSG00000275578;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18799754	18799964	.	+	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;alternative_source_transcripts=ENST00000618226.1;transcript_id=NA12877_ch_T0001232;gene_id=NA12877_ch_G0000421;Parent=NA12877_ch_T0001232;transcript_name=NA12877_ch_T0001232;gene_name=ENSG00000275578;ID=exon:NA12877_ch_T0001232:1;Name=ENSG00000275578;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18876530	18877419	.	-	.	source_gene_common_name=TAF9P1;source_gene=ENSG00000226353.1;alternative_source_transcripts=ENST00000454958.1;gene_id=NA12877_ch_G0000422;gene_biotype=processed_pseudogene;gene_name=TAF9P1;gene_sources=liftoff;ID=NA12877_ch_G0000422;Name=TAF9P1
NA12877_chrY	CAT	transcript	18876530	18877419	1000	-	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000454958.1;transcript_id=NA12877_ch_T0001233;gene_id=NA12877_ch_G0000422;Parent=NA12877_ch_G0000422;transcript_name=NA12877_ch_T0001233;gene_name=TAF9P1;ID=NA12877_ch_T0001233;Name=TAF9P1
NA12877_chrY	CAT	exon	18876530	18876571	.	-	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000454958.1;transcript_id=NA12877_ch_T0001233;gene_id=NA12877_ch_G0000422;Parent=NA12877_ch_T0001233;transcript_name=NA12877_ch_T0001233;gene_name=TAF9P1;ID=exon:NA12877_ch_T0001233:0;Name=TAF9P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18876572	18876946	.	-	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000454958.1;transcript_id=NA12877_ch_T0001233;gene_id=NA12877_ch_G0000422;Parent=NA12877_ch_T0001233;transcript_name=NA12877_ch_T0001233;gene_name=TAF9P1;ID=intron:NA12877_ch_T0001233:0;Name=TAF9P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18876947	18877419	.	-	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000454958.1;transcript_id=NA12877_ch_T0001233;gene_id=NA12877_ch_G0000422;Parent=NA12877_ch_T0001233;transcript_name=NA12877_ch_T0001233;gene_name=TAF9P1;ID=exon:NA12877_ch_T0001233:1;Name=TAF9P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18880103	18884676	.	+	.	source_gene_common_name=CLUHP1;source_gene=ENSG00000238191.3;gene_id=NA12877_ch_G0000423;gene_biotype=unprocessed_pseudogene;gene_name=CLUHP1;gene_sources=liftoff;ID=NA12877_ch_G0000423;Name=CLUHP1
NA12877_chrY	CAT	transcript	18880103	18884676	1000	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_G0000423;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=NA12877_ch_T0001234;Name=CLUHP1
NA12877_chrY	CAT	exon	18880103	18880288	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=exon:NA12877_ch_T0001234:0;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18880289	18881173	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=intron:NA12877_ch_T0001234:0;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18881174	18881314	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=exon:NA12877_ch_T0001234:1;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18881315	18881496	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=intron:NA12877_ch_T0001234:1;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18881497	18881612	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=exon:NA12877_ch_T0001234:2;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18881613	18881689	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=intron:NA12877_ch_T0001234:2;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18881690	18881843	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=exon:NA12877_ch_T0001234:3;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18881844	18881946	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=intron:NA12877_ch_T0001234:3;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18881947	18882071	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=exon:NA12877_ch_T0001234:4;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18882072	18882715	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=intron:NA12877_ch_T0001234:4;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18882716	18882788	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=exon:NA12877_ch_T0001234:5;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18882789	18883038	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=intron:NA12877_ch_T0001234:5;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18883039	18883130	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=exon:NA12877_ch_T0001234:6;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18883131	18883819	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=intron:NA12877_ch_T0001234:6;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18883820	18883918	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=exon:NA12877_ch_T0001234:7;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18883919	18884395	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=intron:NA12877_ch_T0001234:7;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18884396	18884475	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=exon:NA12877_ch_T0001234:8;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18884476	18884552	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=intron:NA12877_ch_T0001234:8;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18884553	18884676	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=NA12877_ch_T0001234;gene_id=NA12877_ch_G0000423;Parent=NA12877_ch_T0001234;transcript_name=NA12877_ch_T0001234;gene_name=CLUHP1;ID=exon:NA12877_ch_T0001234:9;Name=CLUHP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18925983	18952655	.	+	.	source_gene_common_name=FAM224A;source_gene=ENSG00000233522.2;alternative_source_transcripts=ENST00000776205.1;gene_id=NA12877_ch_G0000424;gene_biotype=lncRNA;gene_name=FAM224A;gene_sources=liftoff;ID=NA12877_ch_G0000424;Name=FAM224A
NA12877_chrY	CAT	transcript	18925983	18930822	1000	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=NA12877_ch_T0001235;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001235;gene_name=FAM224A;ID=NA12877_ch_T0001235;Name=FAM224A
NA12877_chrY	CAT	exon	18925983	18926277	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=NA12877_ch_T0001235;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001235;transcript_name=NA12877_ch_T0001235;gene_name=FAM224A;ID=exon:NA12877_ch_T0001235:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926467	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=NA12877_ch_T0001235;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001235;transcript_name=NA12877_ch_T0001235;gene_name=FAM224A;ID=intron:NA12877_ch_T0001235:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926468	18926627	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=NA12877_ch_T0001235;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001235;transcript_name=NA12877_ch_T0001235;gene_name=FAM224A;ID=exon:NA12877_ch_T0001235:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=NA12877_ch_T0001235;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001235;transcript_name=NA12877_ch_T0001235;gene_name=FAM224A;ID=intron:NA12877_ch_T0001235:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=NA12877_ch_T0001235;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001235;transcript_name=NA12877_ch_T0001235;gene_name=FAM224A;ID=exon:NA12877_ch_T0001235:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=NA12877_ch_T0001235;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001235;transcript_name=NA12877_ch_T0001235;gene_name=FAM224A;ID=intron:NA12877_ch_T0001235:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930822	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=NA12877_ch_T0001235;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001235;transcript_name=NA12877_ch_T0001235;gene_name=FAM224A;ID=exon:NA12877_ch_T0001235:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926066	18930792	1000	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=NA12877_ch_T0001236;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001236;gene_name=FAM224A;ID=NA12877_ch_T0001236;Name=FAM224A
NA12877_chrY	CAT	exon	18926066	18926277	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=NA12877_ch_T0001236;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001236;transcript_name=NA12877_ch_T0001236;gene_name=FAM224A;ID=exon:NA12877_ch_T0001236:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926393	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=NA12877_ch_T0001236;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001236;transcript_name=NA12877_ch_T0001236;gene_name=FAM224A;ID=intron:NA12877_ch_T0001236:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926394	18926627	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=NA12877_ch_T0001236;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001236;transcript_name=NA12877_ch_T0001236;gene_name=FAM224A;ID=exon:NA12877_ch_T0001236:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=NA12877_ch_T0001236;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001236;transcript_name=NA12877_ch_T0001236;gene_name=FAM224A;ID=intron:NA12877_ch_T0001236:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=NA12877_ch_T0001236;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001236;transcript_name=NA12877_ch_T0001236;gene_name=FAM224A;ID=exon:NA12877_ch_T0001236:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=NA12877_ch_T0001236;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001236;transcript_name=NA12877_ch_T0001236;gene_name=FAM224A;ID=intron:NA12877_ch_T0001236:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930792	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=NA12877_ch_T0001236;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001236;transcript_name=NA12877_ch_T0001236;gene_name=FAM224A;ID=exon:NA12877_ch_T0001236:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926078	18952666	1000	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=NA12877_ch_T0001237;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001237;gene_name=FAM224A;ID=NA12877_ch_T0001237;Name=FAM224A
NA12877_chrY	CAT	exon	18926078	18926627	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=NA12877_ch_T0001237;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001237;transcript_name=NA12877_ch_T0001237;gene_name=FAM224A;ID=exon:NA12877_ch_T0001237:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=NA12877_ch_T0001237;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001237;transcript_name=NA12877_ch_T0001237;gene_name=FAM224A;ID=intron:NA12877_ch_T0001237:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=NA12877_ch_T0001237;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001237;transcript_name=NA12877_ch_T0001237;gene_name=FAM224A;ID=exon:NA12877_ch_T0001237:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18951822	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=NA12877_ch_T0001237;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001237;transcript_name=NA12877_ch_T0001237;gene_name=FAM224A;ID=intron:NA12877_ch_T0001237:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951823	18951907	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=NA12877_ch_T0001237;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001237;transcript_name=NA12877_ch_T0001237;gene_name=FAM224A;ID=exon:NA12877_ch_T0001237:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18951908	18951994	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=NA12877_ch_T0001237;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001237;transcript_name=NA12877_ch_T0001237;gene_name=FAM224A;ID=intron:NA12877_ch_T0001237:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951995	18952666	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=NA12877_ch_T0001237;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001237;transcript_name=NA12877_ch_T0001237;gene_name=FAM224A;ID=exon:NA12877_ch_T0001237:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926078	18930821	1000	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=NA12877_ch_T0001238;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001238;gene_name=FAM224A;ID=NA12877_ch_T0001238;Name=FAM224A
NA12877_chrY	CAT	exon	18926078	18926627	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=NA12877_ch_T0001238;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001238;transcript_name=NA12877_ch_T0001238;gene_name=FAM224A;ID=exon:NA12877_ch_T0001238:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=NA12877_ch_T0001238;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001238;transcript_name=NA12877_ch_T0001238;gene_name=FAM224A;ID=intron:NA12877_ch_T0001238:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=NA12877_ch_T0001238;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001238;transcript_name=NA12877_ch_T0001238;gene_name=FAM224A;ID=exon:NA12877_ch_T0001238:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=NA12877_ch_T0001238;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001238;transcript_name=NA12877_ch_T0001238;gene_name=FAM224A;ID=intron:NA12877_ch_T0001238:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930821	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=NA12877_ch_T0001238;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001238;transcript_name=NA12877_ch_T0001238;gene_name=FAM224A;ID=exon:NA12877_ch_T0001238:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926085	18930805	1000	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=NA12877_ch_T0001239;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001239;gene_name=FAM224A;ID=NA12877_ch_T0001239;Name=FAM224A
NA12877_chrY	CAT	exon	18926085	18926277	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=NA12877_ch_T0001239;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001239;transcript_name=NA12877_ch_T0001239;gene_name=FAM224A;ID=exon:NA12877_ch_T0001239:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926467	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=NA12877_ch_T0001239;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001239;transcript_name=NA12877_ch_T0001239;gene_name=FAM224A;ID=intron:NA12877_ch_T0001239:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926468	18926627	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=NA12877_ch_T0001239;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001239;transcript_name=NA12877_ch_T0001239;gene_name=FAM224A;ID=exon:NA12877_ch_T0001239:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929155	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=NA12877_ch_T0001239;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001239;transcript_name=NA12877_ch_T0001239;gene_name=FAM224A;ID=intron:NA12877_ch_T0001239:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929156	18929245	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=NA12877_ch_T0001239;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001239;transcript_name=NA12877_ch_T0001239;gene_name=FAM224A;ID=exon:NA12877_ch_T0001239:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=NA12877_ch_T0001239;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001239;transcript_name=NA12877_ch_T0001239;gene_name=FAM224A;ID=intron:NA12877_ch_T0001239:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930805	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=NA12877_ch_T0001239;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001239;transcript_name=NA12877_ch_T0001239;gene_name=FAM224A;ID=exon:NA12877_ch_T0001239:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926087	18930766	1000	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=NA12877_ch_T0001240;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001240;gene_name=FAM224A;ID=NA12877_ch_T0001240;Name=FAM224A
NA12877_chrY	CAT	exon	18926087	18926277	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=NA12877_ch_T0001240;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001240;transcript_name=NA12877_ch_T0001240;gene_name=FAM224A;ID=exon:NA12877_ch_T0001240:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926467	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=NA12877_ch_T0001240;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001240;transcript_name=NA12877_ch_T0001240;gene_name=FAM224A;ID=intron:NA12877_ch_T0001240:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926468	18926627	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=NA12877_ch_T0001240;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001240;transcript_name=NA12877_ch_T0001240;gene_name=FAM224A;ID=exon:NA12877_ch_T0001240:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18928175	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=NA12877_ch_T0001240;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001240;transcript_name=NA12877_ch_T0001240;gene_name=FAM224A;ID=intron:NA12877_ch_T0001240:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18928176	18929245	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=NA12877_ch_T0001240;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001240;transcript_name=NA12877_ch_T0001240;gene_name=FAM224A;ID=exon:NA12877_ch_T0001240:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=NA12877_ch_T0001240;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001240;transcript_name=NA12877_ch_T0001240;gene_name=FAM224A;ID=intron:NA12877_ch_T0001240:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930766	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=NA12877_ch_T0001240;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001240;transcript_name=NA12877_ch_T0001240;gene_name=FAM224A;ID=exon:NA12877_ch_T0001240:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926089	18952655	1000	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=NA12877_ch_T0001241;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001241;gene_name=FAM224A;ID=NA12877_ch_T0001241;Name=FAM224A
NA12877_chrY	CAT	exon	18926089	18926277	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=NA12877_ch_T0001241;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001241;transcript_name=NA12877_ch_T0001241;gene_name=FAM224A;ID=exon:NA12877_ch_T0001241:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926467	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=NA12877_ch_T0001241;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001241;transcript_name=NA12877_ch_T0001241;gene_name=FAM224A;ID=intron:NA12877_ch_T0001241:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926468	18926627	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=NA12877_ch_T0001241;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001241;transcript_name=NA12877_ch_T0001241;gene_name=FAM224A;ID=exon:NA12877_ch_T0001241:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=NA12877_ch_T0001241;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001241;transcript_name=NA12877_ch_T0001241;gene_name=FAM224A;ID=intron:NA12877_ch_T0001241:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=NA12877_ch_T0001241;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001241;transcript_name=NA12877_ch_T0001241;gene_name=FAM224A;ID=exon:NA12877_ch_T0001241:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18951822	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=NA12877_ch_T0001241;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001241;transcript_name=NA12877_ch_T0001241;gene_name=FAM224A;ID=intron:NA12877_ch_T0001241:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951823	18951907	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=NA12877_ch_T0001241;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001241;transcript_name=NA12877_ch_T0001241;gene_name=FAM224A;ID=exon:NA12877_ch_T0001241:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18951908	18951994	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=NA12877_ch_T0001241;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001241;transcript_name=NA12877_ch_T0001241;gene_name=FAM224A;ID=intron:NA12877_ch_T0001241:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951995	18952121	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=NA12877_ch_T0001241;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001241;transcript_name=NA12877_ch_T0001241;gene_name=FAM224A;ID=exon:NA12877_ch_T0001241:4;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18952122	18952595	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=NA12877_ch_T0001241;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001241;transcript_name=NA12877_ch_T0001241;gene_name=FAM224A;ID=intron:NA12877_ch_T0001241:4;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18952596	18952655	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=NA12877_ch_T0001241;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001241;transcript_name=NA12877_ch_T0001241;gene_name=FAM224A;ID=exon:NA12877_ch_T0001241:5;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926089	18952381	1000	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=NA12877_ch_T0001242;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001242;gene_name=FAM224A;ID=NA12877_ch_T0001242;Name=FAM224A
NA12877_chrY	CAT	exon	18926089	18926277	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=NA12877_ch_T0001242;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001242;transcript_name=NA12877_ch_T0001242;gene_name=FAM224A;ID=exon:NA12877_ch_T0001242:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18951822	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=NA12877_ch_T0001242;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001242;transcript_name=NA12877_ch_T0001242;gene_name=FAM224A;ID=intron:NA12877_ch_T0001242:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951823	18951907	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=NA12877_ch_T0001242;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001242;transcript_name=NA12877_ch_T0001242;gene_name=FAM224A;ID=exon:NA12877_ch_T0001242:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18951908	18951994	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=NA12877_ch_T0001242;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001242;transcript_name=NA12877_ch_T0001242;gene_name=FAM224A;ID=intron:NA12877_ch_T0001242:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951995	18952381	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=NA12877_ch_T0001242;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001242;transcript_name=NA12877_ch_T0001242;gene_name=FAM224A;ID=exon:NA12877_ch_T0001242:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926089	18930791	1000	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=NA12877_ch_T0001243;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001243;gene_name=FAM224A;ID=NA12877_ch_T0001243;Name=FAM224A
NA12877_chrY	CAT	exon	18926089	18926277	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=NA12877_ch_T0001243;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001243;transcript_name=NA12877_ch_T0001243;gene_name=FAM224A;ID=exon:NA12877_ch_T0001243:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926491	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=NA12877_ch_T0001243;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001243;transcript_name=NA12877_ch_T0001243;gene_name=FAM224A;ID=intron:NA12877_ch_T0001243:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926492	18926627	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=NA12877_ch_T0001243;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001243;transcript_name=NA12877_ch_T0001243;gene_name=FAM224A;ID=exon:NA12877_ch_T0001243:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=NA12877_ch_T0001243;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001243;transcript_name=NA12877_ch_T0001243;gene_name=FAM224A;ID=intron:NA12877_ch_T0001243:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=NA12877_ch_T0001243;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001243;transcript_name=NA12877_ch_T0001243;gene_name=FAM224A;ID=exon:NA12877_ch_T0001243:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=NA12877_ch_T0001243;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001243;transcript_name=NA12877_ch_T0001243;gene_name=FAM224A;ID=intron:NA12877_ch_T0001243:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930791	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=NA12877_ch_T0001243;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001243;transcript_name=NA12877_ch_T0001243;gene_name=FAM224A;ID=exon:NA12877_ch_T0001243:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926093	18952653	1000	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=NA12877_ch_T0001244;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001244;gene_name=FAM224A;ID=NA12877_ch_T0001244;Name=FAM224A
NA12877_chrY	CAT	exon	18926093	18926277	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=NA12877_ch_T0001244;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001244;transcript_name=NA12877_ch_T0001244;gene_name=FAM224A;ID=exon:NA12877_ch_T0001244:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926467	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=NA12877_ch_T0001244;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001244;transcript_name=NA12877_ch_T0001244;gene_name=FAM224A;ID=intron:NA12877_ch_T0001244:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926468	18926627	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=NA12877_ch_T0001244;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001244;transcript_name=NA12877_ch_T0001244;gene_name=FAM224A;ID=exon:NA12877_ch_T0001244:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=NA12877_ch_T0001244;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001244;transcript_name=NA12877_ch_T0001244;gene_name=FAM224A;ID=intron:NA12877_ch_T0001244:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=NA12877_ch_T0001244;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001244;transcript_name=NA12877_ch_T0001244;gene_name=FAM224A;ID=exon:NA12877_ch_T0001244:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18951822	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=NA12877_ch_T0001244;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001244;transcript_name=NA12877_ch_T0001244;gene_name=FAM224A;ID=intron:NA12877_ch_T0001244:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951823	18951907	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=NA12877_ch_T0001244;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001244;transcript_name=NA12877_ch_T0001244;gene_name=FAM224A;ID=exon:NA12877_ch_T0001244:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18951908	18951994	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=NA12877_ch_T0001244;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001244;transcript_name=NA12877_ch_T0001244;gene_name=FAM224A;ID=intron:NA12877_ch_T0001244:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951995	18952653	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=NA12877_ch_T0001244;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001244;transcript_name=NA12877_ch_T0001244;gene_name=FAM224A;ID=exon:NA12877_ch_T0001244:4;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926093	18952651	1000	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=NA12877_ch_T0001245;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001245;gene_name=FAM224A;ID=NA12877_ch_T0001245;Name=FAM224A
NA12877_chrY	CAT	exon	18926093	18926277	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=NA12877_ch_T0001245;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001245;transcript_name=NA12877_ch_T0001245;gene_name=FAM224A;ID=exon:NA12877_ch_T0001245:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926467	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=NA12877_ch_T0001245;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001245;transcript_name=NA12877_ch_T0001245;gene_name=FAM224A;ID=intron:NA12877_ch_T0001245:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926468	18926627	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=NA12877_ch_T0001245;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001245;transcript_name=NA12877_ch_T0001245;gene_name=FAM224A;ID=exon:NA12877_ch_T0001245:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929155	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=NA12877_ch_T0001245;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001245;transcript_name=NA12877_ch_T0001245;gene_name=FAM224A;ID=intron:NA12877_ch_T0001245:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929156	18929245	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=NA12877_ch_T0001245;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001245;transcript_name=NA12877_ch_T0001245;gene_name=FAM224A;ID=exon:NA12877_ch_T0001245:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18951822	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=NA12877_ch_T0001245;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001245;transcript_name=NA12877_ch_T0001245;gene_name=FAM224A;ID=intron:NA12877_ch_T0001245:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951823	18951907	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=NA12877_ch_T0001245;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001245;transcript_name=NA12877_ch_T0001245;gene_name=FAM224A;ID=exon:NA12877_ch_T0001245:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18951908	18951994	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=NA12877_ch_T0001245;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001245;transcript_name=NA12877_ch_T0001245;gene_name=FAM224A;ID=intron:NA12877_ch_T0001245:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951995	18952155	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=NA12877_ch_T0001245;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001245;transcript_name=NA12877_ch_T0001245;gene_name=FAM224A;ID=exon:NA12877_ch_T0001245:4;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18952156	18952595	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=NA12877_ch_T0001245;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001245;transcript_name=NA12877_ch_T0001245;gene_name=FAM224A;ID=intron:NA12877_ch_T0001245:4;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18952596	18952651	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=NA12877_ch_T0001245;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001245;transcript_name=NA12877_ch_T0001245;gene_name=FAM224A;ID=exon:NA12877_ch_T0001245:5;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926098	18952653	1000	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=NA12877_ch_T0001246;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001246;gene_name=FAM224A;ID=NA12877_ch_T0001246;Name=FAM224A
NA12877_chrY	CAT	exon	18926098	18926277	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=NA12877_ch_T0001246;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001246;transcript_name=NA12877_ch_T0001246;gene_name=FAM224A;ID=exon:NA12877_ch_T0001246:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926467	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=NA12877_ch_T0001246;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001246;transcript_name=NA12877_ch_T0001246;gene_name=FAM224A;ID=intron:NA12877_ch_T0001246:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926468	18926627	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=NA12877_ch_T0001246;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001246;transcript_name=NA12877_ch_T0001246;gene_name=FAM224A;ID=exon:NA12877_ch_T0001246:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=NA12877_ch_T0001246;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001246;transcript_name=NA12877_ch_T0001246;gene_name=FAM224A;ID=intron:NA12877_ch_T0001246:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=NA12877_ch_T0001246;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001246;transcript_name=NA12877_ch_T0001246;gene_name=FAM224A;ID=exon:NA12877_ch_T0001246:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=NA12877_ch_T0001246;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001246;transcript_name=NA12877_ch_T0001246;gene_name=FAM224A;ID=intron:NA12877_ch_T0001246:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930710	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=NA12877_ch_T0001246;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001246;transcript_name=NA12877_ch_T0001246;gene_name=FAM224A;ID=exon:NA12877_ch_T0001246:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18930711	18951822	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=NA12877_ch_T0001246;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001246;transcript_name=NA12877_ch_T0001246;gene_name=FAM224A;ID=intron:NA12877_ch_T0001246:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951823	18951907	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=NA12877_ch_T0001246;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001246;transcript_name=NA12877_ch_T0001246;gene_name=FAM224A;ID=exon:NA12877_ch_T0001246:4;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18951908	18951994	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=NA12877_ch_T0001246;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001246;transcript_name=NA12877_ch_T0001246;gene_name=FAM224A;ID=intron:NA12877_ch_T0001246:4;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951995	18952653	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=NA12877_ch_T0001246;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001246;transcript_name=NA12877_ch_T0001246;gene_name=FAM224A;ID=exon:NA12877_ch_T0001246:5;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926132	18952651	1000	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=NA12877_ch_T0001247;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001247;gene_name=FAM224A;ID=NA12877_ch_T0001247;Name=FAM224A
NA12877_chrY	CAT	exon	18926132	18926277	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=NA12877_ch_T0001247;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001247;transcript_name=NA12877_ch_T0001247;gene_name=FAM224A;ID=exon:NA12877_ch_T0001247:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926393	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=NA12877_ch_T0001247;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001247;transcript_name=NA12877_ch_T0001247;gene_name=FAM224A;ID=intron:NA12877_ch_T0001247:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926394	18926627	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=NA12877_ch_T0001247;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001247;transcript_name=NA12877_ch_T0001247;gene_name=FAM224A;ID=exon:NA12877_ch_T0001247:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=NA12877_ch_T0001247;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001247;transcript_name=NA12877_ch_T0001247;gene_name=FAM224A;ID=intron:NA12877_ch_T0001247:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=NA12877_ch_T0001247;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001247;transcript_name=NA12877_ch_T0001247;gene_name=FAM224A;ID=exon:NA12877_ch_T0001247:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18951822	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=NA12877_ch_T0001247;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001247;transcript_name=NA12877_ch_T0001247;gene_name=FAM224A;ID=intron:NA12877_ch_T0001247:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951823	18951907	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=NA12877_ch_T0001247;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001247;transcript_name=NA12877_ch_T0001247;gene_name=FAM224A;ID=exon:NA12877_ch_T0001247:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18951908	18951994	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=NA12877_ch_T0001247;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001247;transcript_name=NA12877_ch_T0001247;gene_name=FAM224A;ID=intron:NA12877_ch_T0001247:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951995	18952651	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=NA12877_ch_T0001247;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001247;transcript_name=NA12877_ch_T0001247;gene_name=FAM224A;ID=exon:NA12877_ch_T0001247:4;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926132	18930791	1000	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=NA12877_ch_T0001248;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001248;gene_name=FAM224A;ID=NA12877_ch_T0001248;Name=FAM224A
NA12877_chrY	CAT	exon	18926132	18926277	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=NA12877_ch_T0001248;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001248;transcript_name=NA12877_ch_T0001248;gene_name=FAM224A;ID=exon:NA12877_ch_T0001248:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18929127	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=NA12877_ch_T0001248;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001248;transcript_name=NA12877_ch_T0001248;gene_name=FAM224A;ID=intron:NA12877_ch_T0001248:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=NA12877_ch_T0001248;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001248;transcript_name=NA12877_ch_T0001248;gene_name=FAM224A;ID=exon:NA12877_ch_T0001248:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=NA12877_ch_T0001248;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001248;transcript_name=NA12877_ch_T0001248;gene_name=FAM224A;ID=intron:NA12877_ch_T0001248:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930791	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=NA12877_ch_T0001248;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001248;transcript_name=NA12877_ch_T0001248;gene_name=FAM224A;ID=exon:NA12877_ch_T0001248:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926132	18930505	1000	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=NA12877_ch_T0001249;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001249;gene_name=FAM224A;ID=NA12877_ch_T0001249;Name=FAM224A
NA12877_chrY	CAT	exon	18926132	18926277	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=NA12877_ch_T0001249;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001249;transcript_name=NA12877_ch_T0001249;gene_name=FAM224A;ID=exon:NA12877_ch_T0001249:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926467	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=NA12877_ch_T0001249;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001249;transcript_name=NA12877_ch_T0001249;gene_name=FAM224A;ID=intron:NA12877_ch_T0001249:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926468	18926627	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=NA12877_ch_T0001249;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001249;transcript_name=NA12877_ch_T0001249;gene_name=FAM224A;ID=exon:NA12877_ch_T0001249:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929284	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=NA12877_ch_T0001249;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001249;transcript_name=NA12877_ch_T0001249;gene_name=FAM224A;ID=intron:NA12877_ch_T0001249:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929285	18930505	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=NA12877_ch_T0001249;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001249;transcript_name=NA12877_ch_T0001249;gene_name=FAM224A;ID=exon:NA12877_ch_T0001249:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926137	18930791	1000	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=NA12877_ch_T0001250;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001250;gene_name=FAM224A;ID=NA12877_ch_T0001250;Name=FAM224A
NA12877_chrY	CAT	exon	18926137	18926277	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=NA12877_ch_T0001250;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001250;transcript_name=NA12877_ch_T0001250;gene_name=FAM224A;ID=exon:NA12877_ch_T0001250:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926505	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=NA12877_ch_T0001250;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001250;transcript_name=NA12877_ch_T0001250;gene_name=FAM224A;ID=intron:NA12877_ch_T0001250:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926506	18926627	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=NA12877_ch_T0001250;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001250;transcript_name=NA12877_ch_T0001250;gene_name=FAM224A;ID=exon:NA12877_ch_T0001250:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=NA12877_ch_T0001250;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001250;transcript_name=NA12877_ch_T0001250;gene_name=FAM224A;ID=intron:NA12877_ch_T0001250:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=NA12877_ch_T0001250;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001250;transcript_name=NA12877_ch_T0001250;gene_name=FAM224A;ID=exon:NA12877_ch_T0001250:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=NA12877_ch_T0001250;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001250;transcript_name=NA12877_ch_T0001250;gene_name=FAM224A;ID=intron:NA12877_ch_T0001250:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930791	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=NA12877_ch_T0001250;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001250;transcript_name=NA12877_ch_T0001250;gene_name=FAM224A;ID=exon:NA12877_ch_T0001250:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926138	18952651	1000	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=NA12877_ch_T0001251;Name=FAM224A
NA12877_chrY	CAT	exon	18926138	18926277	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=exon:NA12877_ch_T0001251:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926467	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=intron:NA12877_ch_T0001251:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926468	18926627	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=exon:NA12877_ch_T0001251:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=intron:NA12877_ch_T0001251:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=exon:NA12877_ch_T0001251:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=intron:NA12877_ch_T0001251:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930710	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=exon:NA12877_ch_T0001251:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18930711	18951822	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=intron:NA12877_ch_T0001251:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951823	18951907	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=exon:NA12877_ch_T0001251:4;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18951908	18951994	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=intron:NA12877_ch_T0001251:4;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951995	18952121	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=exon:NA12877_ch_T0001251:5;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18952122	18952595	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=intron:NA12877_ch_T0001251:5;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18952596	18952651	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=NA12877_ch_T0001251;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001251;transcript_name=NA12877_ch_T0001251;gene_name=FAM224A;ID=exon:NA12877_ch_T0001251:6;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926138	18930764	1000	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=NA12877_ch_T0001252;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001252;gene_name=FAM224A;ID=NA12877_ch_T0001252;Name=FAM224A
NA12877_chrY	CAT	exon	18926138	18926277	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=NA12877_ch_T0001252;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001252;transcript_name=NA12877_ch_T0001252;gene_name=FAM224A;ID=exon:NA12877_ch_T0001252:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926467	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=NA12877_ch_T0001252;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001252;transcript_name=NA12877_ch_T0001252;gene_name=FAM224A;ID=intron:NA12877_ch_T0001252:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926468	18926627	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=NA12877_ch_T0001252;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001252;transcript_name=NA12877_ch_T0001252;gene_name=FAM224A;ID=exon:NA12877_ch_T0001252:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18930580	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=NA12877_ch_T0001252;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001252;transcript_name=NA12877_ch_T0001252;gene_name=FAM224A;ID=intron:NA12877_ch_T0001252:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930764	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=NA12877_ch_T0001252;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001252;transcript_name=NA12877_ch_T0001252;gene_name=FAM224A;ID=exon:NA12877_ch_T0001252:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926139	18952378	1000	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=NA12877_ch_T0001253;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001253;gene_name=FAM224A;ID=NA12877_ch_T0001253;Name=FAM224A
NA12877_chrY	CAT	exon	18926139	18926627	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=NA12877_ch_T0001253;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001253;transcript_name=NA12877_ch_T0001253;gene_name=FAM224A;ID=exon:NA12877_ch_T0001253:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=NA12877_ch_T0001253;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001253;transcript_name=NA12877_ch_T0001253;gene_name=FAM224A;ID=intron:NA12877_ch_T0001253:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=NA12877_ch_T0001253;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001253;transcript_name=NA12877_ch_T0001253;gene_name=FAM224A;ID=exon:NA12877_ch_T0001253:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=NA12877_ch_T0001253;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001253;transcript_name=NA12877_ch_T0001253;gene_name=FAM224A;ID=intron:NA12877_ch_T0001253:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930710	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=NA12877_ch_T0001253;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001253;transcript_name=NA12877_ch_T0001253;gene_name=FAM224A;ID=exon:NA12877_ch_T0001253:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18930711	18951822	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=NA12877_ch_T0001253;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001253;transcript_name=NA12877_ch_T0001253;gene_name=FAM224A;ID=intron:NA12877_ch_T0001253:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951823	18951907	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=NA12877_ch_T0001253;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001253;transcript_name=NA12877_ch_T0001253;gene_name=FAM224A;ID=exon:NA12877_ch_T0001253:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18951908	18951994	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=NA12877_ch_T0001253;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001253;transcript_name=NA12877_ch_T0001253;gene_name=FAM224A;ID=intron:NA12877_ch_T0001253:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951995	18952378	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=NA12877_ch_T0001253;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001253;transcript_name=NA12877_ch_T0001253;gene_name=FAM224A;ID=exon:NA12877_ch_T0001253:4;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926175	18930791	1000	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=NA12877_ch_T0001254;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001254;gene_name=FAM224A;ID=NA12877_ch_T0001254;Name=FAM224A
NA12877_chrY	CAT	exon	18926175	18926277	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=NA12877_ch_T0001254;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001254;transcript_name=NA12877_ch_T0001254;gene_name=FAM224A;ID=exon:NA12877_ch_T0001254:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926278	18926393	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=NA12877_ch_T0001254;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001254;transcript_name=NA12877_ch_T0001254;gene_name=FAM224A;ID=intron:NA12877_ch_T0001254:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18926394	18926627	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=NA12877_ch_T0001254;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001254;transcript_name=NA12877_ch_T0001254;gene_name=FAM224A;ID=exon:NA12877_ch_T0001254:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929155	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=NA12877_ch_T0001254;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001254;transcript_name=NA12877_ch_T0001254;gene_name=FAM224A;ID=intron:NA12877_ch_T0001254:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929156	18929245	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=NA12877_ch_T0001254;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001254;transcript_name=NA12877_ch_T0001254;gene_name=FAM224A;ID=exon:NA12877_ch_T0001254:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=NA12877_ch_T0001254;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001254;transcript_name=NA12877_ch_T0001254;gene_name=FAM224A;ID=intron:NA12877_ch_T0001254:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930791	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=NA12877_ch_T0001254;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001254;transcript_name=NA12877_ch_T0001254;gene_name=FAM224A;ID=exon:NA12877_ch_T0001254:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926189	18953149	1000	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=NA12877_ch_T0001255;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001255;gene_name=FAM224A;ID=NA12877_ch_T0001255;Name=FAM224A
NA12877_chrY	CAT	exon	18926189	18926627	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=NA12877_ch_T0001255;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001255;transcript_name=NA12877_ch_T0001255;gene_name=FAM224A;ID=exon:NA12877_ch_T0001255:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929127	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=NA12877_ch_T0001255;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001255;transcript_name=NA12877_ch_T0001255;gene_name=FAM224A;ID=intron:NA12877_ch_T0001255:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929128	18929245	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=NA12877_ch_T0001255;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001255;transcript_name=NA12877_ch_T0001255;gene_name=FAM224A;ID=exon:NA12877_ch_T0001255:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18949938	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=NA12877_ch_T0001255;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001255;transcript_name=NA12877_ch_T0001255;gene_name=FAM224A;ID=intron:NA12877_ch_T0001255:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18949939	18950173	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=NA12877_ch_T0001255;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001255;transcript_name=NA12877_ch_T0001255;gene_name=FAM224A;ID=exon:NA12877_ch_T0001255:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18950174	18951822	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=NA12877_ch_T0001255;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001255;transcript_name=NA12877_ch_T0001255;gene_name=FAM224A;ID=intron:NA12877_ch_T0001255:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951823	18951907	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=NA12877_ch_T0001255;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001255;transcript_name=NA12877_ch_T0001255;gene_name=FAM224A;ID=exon:NA12877_ch_T0001255:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18951908	18951994	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=NA12877_ch_T0001255;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001255;transcript_name=NA12877_ch_T0001255;gene_name=FAM224A;ID=intron:NA12877_ch_T0001255:3;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18951995	18953149	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=NA12877_ch_T0001255;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001255;transcript_name=NA12877_ch_T0001255;gene_name=FAM224A;ID=exon:NA12877_ch_T0001255:4;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18926372	18930783	1000	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=NA12877_ch_T0001256;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_G0000424;transcript_name=NA12877_ch_T0001256;gene_name=FAM224A;ID=NA12877_ch_T0001256;Name=FAM224A
NA12877_chrY	CAT	exon	18926372	18926627	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=NA12877_ch_T0001256;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001256;transcript_name=NA12877_ch_T0001256;gene_name=FAM224A;ID=exon:NA12877_ch_T0001256:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18926628	18929155	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=NA12877_ch_T0001256;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001256;transcript_name=NA12877_ch_T0001256;gene_name=FAM224A;ID=intron:NA12877_ch_T0001256:0;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18929156	18929245	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=NA12877_ch_T0001256;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001256;transcript_name=NA12877_ch_T0001256;gene_name=FAM224A;ID=exon:NA12877_ch_T0001256:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18929246	18930580	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=NA12877_ch_T0001256;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001256;transcript_name=NA12877_ch_T0001256;gene_name=FAM224A;ID=intron:NA12877_ch_T0001256:1;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18930581	18930783	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=NA12877_ch_T0001256;gene_id=NA12877_ch_G0000424;Parent=NA12877_ch_T0001256;transcript_name=NA12877_ch_T0001256;gene_name=FAM224A;ID=exon:NA12877_ch_T0001256:2;Name=FAM224A;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18936897	18936986	.	+	.	source_gene_common_name=ENSG00000278391;source_gene=ENSG00000278391.1;alternative_source_transcripts=ENST00000614353.1;gene_id=NA12877_ch_G0000425;gene_biotype=misc_RNA;gene_name=ENSG00000278391;gene_sources=liftoff;ID=NA12877_ch_G0000425;Name=ENSG00000278391
NA12877_chrY	CAT	transcript	18936897	18936986	1000	+	.	source_transcript=ENST00000614353.1;source_transcript_name=ENST00000614353;source_gene=ENSG00000278391.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278391.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000614353.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614353.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278391;alternative_source_transcripts=ENST00000614353.1;transcript_id=NA12877_ch_T0001257;gene_id=NA12877_ch_G0000425;Parent=NA12877_ch_G0000425;transcript_name=NA12877_ch_T0001257;gene_name=ENSG00000278391;ID=NA12877_ch_T0001257;Name=ENSG00000278391
NA12877_chrY	CAT	exon	18936897	18936986	.	+	.	source_transcript=ENST00000614353.1;source_transcript_name=ENST00000614353;source_gene=ENSG00000278391.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278391.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000614353.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614353.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278391;alternative_source_transcripts=ENST00000614353.1;transcript_id=NA12877_ch_T0001257;gene_id=NA12877_ch_G0000425;Parent=NA12877_ch_T0001257;transcript_name=NA12877_ch_T0001257;gene_name=ENSG00000278391;ID=exon:NA12877_ch_T0001257:0;Name=ENSG00000278391;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18946060	18946175	.	-	.	source_gene_common_name=RNA5SP522;source_gene=ENSG00000251953.1;alternative_source_transcripts=ENST00000516144.1;gene_id=NA12877_ch_G0000426;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP522;gene_sources=liftoff;ID=NA12877_ch_G0000426;Name=RNA5SP522
NA12877_chrY	CAT	transcript	18946060	18946175	1000	-	.	source_transcript=ENST00000516144.1;source_transcript_name=RNA5SP522-201;source_gene=ENSG00000251953.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251953.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516144.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP522;alternative_source_transcripts=ENST00000516144.1;transcript_id=NA12877_ch_T0001258;gene_id=NA12877_ch_G0000426;Parent=NA12877_ch_G0000426;transcript_name=NA12877_ch_T0001258;gene_name=RNA5SP522;ID=NA12877_ch_T0001258;Name=RNA5SP522
NA12877_chrY	CAT	exon	18946060	18946175	.	-	.	source_transcript=ENST00000516144.1;source_transcript_name=RNA5SP522-201;source_gene=ENSG00000251953.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251953.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516144.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP522;alternative_source_transcripts=ENST00000516144.1;transcript_id=NA12877_ch_T0001258;gene_id=NA12877_ch_G0000426;Parent=NA12877_ch_T0001258;transcript_name=NA12877_ch_T0001258;gene_name=RNA5SP522;ID=exon:NA12877_ch_T0001258:0;Name=RNA5SP522;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18947973	18948085	.	-	.	source_gene_common_name=RNA5SP523;source_gene=ENSG00000252667.1;alternative_source_transcripts=ENST00000516858.1;gene_id=NA12877_ch_G0000427;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP523;gene_sources=liftoff;ID=NA12877_ch_G0000427;Name=RNA5SP523
NA12877_chrY	CAT	transcript	18947973	18948085	1000	-	.	source_transcript=ENST00000516858.1;source_transcript_name=RNA5SP523-201;source_gene=ENSG00000252667.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252667.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516858.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP523;alternative_source_transcripts=ENST00000516858.1;transcript_id=NA12877_ch_T0001259;gene_id=NA12877_ch_G0000427;Parent=NA12877_ch_G0000427;transcript_name=NA12877_ch_T0001259;gene_name=RNA5SP523;ID=NA12877_ch_T0001259;Name=RNA5SP523
NA12877_chrY	CAT	exon	18947973	18948085	.	-	.	source_transcript=ENST00000516858.1;source_transcript_name=RNA5SP523-201;source_gene=ENSG00000252667.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252667.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516858.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP523;alternative_source_transcripts=ENST00000516858.1;transcript_id=NA12877_ch_T0001259;gene_id=NA12877_ch_G0000427;Parent=NA12877_ch_T0001259;transcript_name=NA12877_ch_T0001259;gene_name=RNA5SP523;ID=exon:NA12877_ch_T0001259:0;Name=RNA5SP523;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18986913	18989090	.	+	.	source_gene_common_name=TUBB1P1;source_gene=ENSG00000249726.1;gene_id=NA12877_ch_G0000428;gene_biotype=unprocessed_pseudogene;gene_name=TUBB1P1;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000428;Name=TUBB1P1
NA12877_chrY	CAT	transcript	18986913	18989090	1000	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001260;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_G0000428;transcript_name=NA12877_ch_T0001260;gene_name=TUBB1P1;ID=NA12877_ch_T0001260;Name=TUBB1P1
NA12877_chrY	CAT	exon	18986913	18986969	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001260;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_T0001260;transcript_name=NA12877_ch_T0001260;gene_name=TUBB1P1;ID=exon:NA12877_ch_T0001260:0;Name=TUBB1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18986970	18987274	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001260;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_T0001260;transcript_name=NA12877_ch_T0001260;gene_name=TUBB1P1;ID=intron:NA12877_ch_T0001260:0;Name=TUBB1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18987275	18987573	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001260;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_T0001260;transcript_name=NA12877_ch_T0001260;gene_name=TUBB1P1;ID=exon:NA12877_ch_T0001260:1;Name=TUBB1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18987574	18988066	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001260;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_T0001260;transcript_name=NA12877_ch_T0001260;gene_name=TUBB1P1;ID=intron:NA12877_ch_T0001260:1;Name=TUBB1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18988067	18989090	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001260;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_T0001260;transcript_name=NA12877_ch_T0001260;gene_name=TUBB1P1;ID=exon:NA12877_ch_T0001260:2;Name=TUBB1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18986913	18989090	1000	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001261;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_G0000428;transcript_name=NA12877_ch_T0001261;gene_name=TUBB1P1;ID=NA12877_ch_T0001261;Name=TUBB1P1
NA12877_chrY	CAT	exon	18986913	18986969	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001261;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_T0001261;transcript_name=NA12877_ch_T0001261;gene_name=TUBB1P1;ID=exon:NA12877_ch_T0001261:0;Name=TUBB1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18986970	18987274	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001261;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_T0001261;transcript_name=NA12877_ch_T0001261;gene_name=TUBB1P1;ID=intron:NA12877_ch_T0001261:0;Name=TUBB1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18987275	18987383	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001261;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_T0001261;transcript_name=NA12877_ch_T0001261;gene_name=TUBB1P1;ID=exon:NA12877_ch_T0001261:1;Name=TUBB1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18987384	18987463	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001261;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_T0001261;transcript_name=NA12877_ch_T0001261;gene_name=TUBB1P1;ID=intron:NA12877_ch_T0001261:1;Name=TUBB1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18987464	18987573	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001261;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_T0001261;transcript_name=NA12877_ch_T0001261;gene_name=TUBB1P1;ID=exon:NA12877_ch_T0001261:2;Name=TUBB1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18987574	18988066	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001261;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_T0001261;transcript_name=NA12877_ch_T0001261;gene_name=TUBB1P1;ID=intron:NA12877_ch_T0001261:2;Name=TUBB1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18988067	18989090	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=NA12877_ch_T0001261;gene_id=NA12877_ch_G0000428;Parent=NA12877_ch_T0001261;transcript_name=NA12877_ch_T0001261;gene_name=TUBB1P1;ID=exon:NA12877_ch_T0001261:3;Name=TUBB1P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18988782	19004991	.	-	.	source_gene_common_name=FAM41AY2;source_gene=ENSG00000290726.3;gene_id=NA12877_ch_G0000429;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=NA12877_ch_G0000429;Name=FAM41AY2
NA12877_chrY	CAT	transcript	18988782	18991063	1000	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001262;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_G0000429;transcript_name=NA12877_ch_T0001262;gene_name=FAM41AY2;ID=NA12877_ch_T0001262;Name=FAM41AY2
NA12877_chrY	CAT	exon	18988782	18989935	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001262;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001262;transcript_name=NA12877_ch_T0001262;gene_name=FAM41AY2;ID=exon:NA12877_ch_T0001262:0;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18989936	18990017	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001262;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001262;transcript_name=NA12877_ch_T0001262;gene_name=FAM41AY2;ID=intron:NA12877_ch_T0001262:0;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18990018	18990239	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001262;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001262;transcript_name=NA12877_ch_T0001262;gene_name=FAM41AY2;ID=exon:NA12877_ch_T0001262:1;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18990240	18990932	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001262;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001262;transcript_name=NA12877_ch_T0001262;gene_name=FAM41AY2;ID=intron:NA12877_ch_T0001262:1;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18990933	18991063	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001262;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001262;transcript_name=NA12877_ch_T0001262;gene_name=FAM41AY2;ID=exon:NA12877_ch_T0001262:2;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	18990933	19004991	1000	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_G0000429;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=NA12877_ch_T0001264;Name=FAM41AY2
NA12877_chrY	CAT	exon	18990933	18991142	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=exon:NA12877_ch_T0001264:0;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18991143	18991416	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=intron:NA12877_ch_T0001264:0;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18991417	18991510	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=exon:NA12877_ch_T0001264:1;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18991511	18991619	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=intron:NA12877_ch_T0001264:1;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18991620	18991790	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=exon:NA12877_ch_T0001264:2;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18991791	18992383	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=intron:NA12877_ch_T0001264:2;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18992384	18992477	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=exon:NA12877_ch_T0001264:3;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18992478	18992724	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=intron:NA12877_ch_T0001264:3;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18992725	18992853	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=exon:NA12877_ch_T0001264:4;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18992854	19004188	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=intron:NA12877_ch_T0001264:4;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19004189	19004238	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=exon:NA12877_ch_T0001264:5;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19004239	19004833	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=intron:NA12877_ch_T0001264:5;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19004834	19004991	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=NA12877_ch_T0001264;gene_id=NA12877_ch_G0000429;Parent=NA12877_ch_T0001264;transcript_name=NA12877_ch_T0001264;gene_name=FAM41AY2;ID=exon:NA12877_ch_T0001264:6;Name=FAM41AY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	18989236	18991449	.	-	.	source_gene_common_name=ENSG00000282909;source_gene=ENSG00000282909.3;gene_id=NA12877_ch_G0000430;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000282909;gene_sources=liftoff;ID=NA12877_ch_G0000430;Name=ENSG00000282909
NA12877_chrY	CAT	transcript	18989236	18991449	1000	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=NA12877_ch_T0001263;gene_id=NA12877_ch_G0000430;Parent=NA12877_ch_G0000430;transcript_name=NA12877_ch_T0001263;gene_name=ENSG00000282909;ID=NA12877_ch_T0001263;Name=ENSG00000282909
NA12877_chrY	CAT	exon	18989236	18989362	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=NA12877_ch_T0001263;gene_id=NA12877_ch_G0000430;Parent=NA12877_ch_T0001263;transcript_name=NA12877_ch_T0001263;gene_name=ENSG00000282909;ID=exon:NA12877_ch_T0001263:0;Name=ENSG00000282909;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18989363	18989818	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=NA12877_ch_T0001263;gene_id=NA12877_ch_G0000430;Parent=NA12877_ch_T0001263;transcript_name=NA12877_ch_T0001263;gene_name=ENSG00000282909;ID=intron:NA12877_ch_T0001263:0;Name=ENSG00000282909;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18989819	18989935	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=NA12877_ch_T0001263;gene_id=NA12877_ch_G0000430;Parent=NA12877_ch_T0001263;transcript_name=NA12877_ch_T0001263;gene_name=ENSG00000282909;ID=exon:NA12877_ch_T0001263:1;Name=ENSG00000282909;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18989936	18990303	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=NA12877_ch_T0001263;gene_id=NA12877_ch_G0000430;Parent=NA12877_ch_T0001263;transcript_name=NA12877_ch_T0001263;gene_name=ENSG00000282909;ID=intron:NA12877_ch_T0001263:1;Name=ENSG00000282909;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18990304	18990398	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=NA12877_ch_T0001263;gene_id=NA12877_ch_G0000430;Parent=NA12877_ch_T0001263;transcript_name=NA12877_ch_T0001263;gene_name=ENSG00000282909;ID=exon:NA12877_ch_T0001263:2;Name=ENSG00000282909;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18990399	18990723	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=NA12877_ch_T0001263;gene_id=NA12877_ch_G0000430;Parent=NA12877_ch_T0001263;transcript_name=NA12877_ch_T0001263;gene_name=ENSG00000282909;ID=intron:NA12877_ch_T0001263:2;Name=ENSG00000282909;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18990724	18990843	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=NA12877_ch_T0001263;gene_id=NA12877_ch_G0000430;Parent=NA12877_ch_T0001263;transcript_name=NA12877_ch_T0001263;gene_name=ENSG00000282909;ID=exon:NA12877_ch_T0001263:3;Name=ENSG00000282909;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18990844	18990932	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=NA12877_ch_T0001263;gene_id=NA12877_ch_G0000430;Parent=NA12877_ch_T0001263;transcript_name=NA12877_ch_T0001263;gene_name=ENSG00000282909;ID=intron:NA12877_ch_T0001263:3;Name=ENSG00000282909;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18990933	18991197	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=NA12877_ch_T0001263;gene_id=NA12877_ch_G0000430;Parent=NA12877_ch_T0001263;transcript_name=NA12877_ch_T0001263;gene_name=ENSG00000282909;ID=exon:NA12877_ch_T0001263:4;Name=ENSG00000282909;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	18991198	18991240	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=NA12877_ch_T0001263;gene_id=NA12877_ch_G0000430;Parent=NA12877_ch_T0001263;transcript_name=NA12877_ch_T0001263;gene_name=ENSG00000282909;ID=intron:NA12877_ch_T0001263:4;Name=ENSG00000282909;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	18991241	18991449	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=NA12877_ch_T0001263;gene_id=NA12877_ch_G0000430;Parent=NA12877_ch_T0001263;transcript_name=NA12877_ch_T0001263;gene_name=ENSG00000282909;ID=exon:NA12877_ch_T0001263:5;Name=ENSG00000282909;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19040742	19041070	.	+	.	source_gene_common_name=ELOCP13;source_gene=ENSG00000225716.1;alternative_source_transcripts=ENST00000443934.1;gene_id=NA12877_ch_G0000431;gene_biotype=processed_pseudogene;gene_name=ELOCP13;gene_sources=liftoff;ID=NA12877_ch_G0000431;Name=ELOCP13
NA12877_chrY	CAT	transcript	19040742	19041070	1000	+	.	source_transcript=ENST00000443934.1;source_transcript_name=ELOCP13-201;source_gene=ENSG00000225716.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225716.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443934.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP13;alternative_source_transcripts=ENST00000443934.1;transcript_id=NA12877_ch_T0001265;gene_id=NA12877_ch_G0000431;Parent=NA12877_ch_G0000431;transcript_name=NA12877_ch_T0001265;gene_name=ELOCP13;ID=NA12877_ch_T0001265;Name=ELOCP13
NA12877_chrY	CAT	exon	19040742	19041070	.	+	.	source_transcript=ENST00000443934.1;source_transcript_name=ELOCP13-201;source_gene=ENSG00000225716.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225716.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443934.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP13;alternative_source_transcripts=ENST00000443934.1;transcript_id=NA12877_ch_T0001265;gene_id=NA12877_ch_G0000431;Parent=NA12877_ch_T0001265;transcript_name=NA12877_ch_T0001265;gene_name=ELOCP13;ID=exon:NA12877_ch_T0001265:0;Name=ELOCP13;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19053095	19072082	.	-	.	source_gene_common_name=OFD1P4Y;source_gene=ENSG00000229406.1;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;gene_id=NA12877_ch_G0000432;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P4Y;gene_sources=liftoff;ID=NA12877_ch_G0000432;Name=OFD1P4Y
NA12877_chrY	CAT	transcript	19053095	19072082	1000	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_G0000432;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=NA12877_ch_T0001266;Name=OFD1P4Y
NA12877_chrY	CAT	exon	19053095	19053208	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=exon:NA12877_ch_T0001266:0;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19053209	19054837	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=intron:NA12877_ch_T0001266:0;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19054838	19054928	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=exon:NA12877_ch_T0001266:1;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19054929	19056033	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=intron:NA12877_ch_T0001266:1;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19056034	19056103	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=exon:NA12877_ch_T0001266:2;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19056104	19057889	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=intron:NA12877_ch_T0001266:2;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19057890	19058008	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=exon:NA12877_ch_T0001266:3;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19058009	19060176	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=intron:NA12877_ch_T0001266:3;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19060177	19060282	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=exon:NA12877_ch_T0001266:4;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19060283	19063392	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=intron:NA12877_ch_T0001266:4;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19063393	19063560	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=exon:NA12877_ch_T0001266:5;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19063561	19063856	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=intron:NA12877_ch_T0001266:5;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19063857	19063993	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=exon:NA12877_ch_T0001266:6;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19063994	19068210	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=intron:NA12877_ch_T0001266:6;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19068211	19068241	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=exon:NA12877_ch_T0001266:7;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19068242	19068328	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=intron:NA12877_ch_T0001266:7;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19068329	19068396	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=exon:NA12877_ch_T0001266:8;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19068397	19070614	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=intron:NA12877_ch_T0001266:8;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19070615	19070815	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=exon:NA12877_ch_T0001266:9;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19070816	19072008	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=intron:NA12877_ch_T0001266:9;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19072009	19072082	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=NA12877_ch_T0001266;gene_id=NA12877_ch_G0000432;Parent=NA12877_ch_T0001266;transcript_name=NA12877_ch_T0001266;gene_name=OFD1P4Y;ID=exon:NA12877_ch_T0001266:10;Name=OFD1P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19080198	19084186	.	+	.	source_gene_common_name=ENSG00000307031;source_gene=ENSG00000307031.1;gene_id=NA12877_ch_G0000433;gene_biotype=lncRNA;gene_name=ENSG00000307031;gene_sources=liftoff;ID=NA12877_ch_G0000433;Name=ENSG00000307031
NA12877_chrY	CAT	transcript	19080198	19084186	1000	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=NA12877_ch_T0001267;gene_id=NA12877_ch_G0000433;Parent=NA12877_ch_G0000433;transcript_name=NA12877_ch_T0001267;gene_name=ENSG00000307031;ID=NA12877_ch_T0001267;Name=ENSG00000307031
NA12877_chrY	CAT	exon	19080198	19080419	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=NA12877_ch_T0001267;gene_id=NA12877_ch_G0000433;Parent=NA12877_ch_T0001267;transcript_name=NA12877_ch_T0001267;gene_name=ENSG00000307031;ID=exon:NA12877_ch_T0001267:0;Name=ENSG00000307031;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19080420	19081037	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=NA12877_ch_T0001267;gene_id=NA12877_ch_G0000433;Parent=NA12877_ch_T0001267;transcript_name=NA12877_ch_T0001267;gene_name=ENSG00000307031;ID=intron:NA12877_ch_T0001267:0;Name=ENSG00000307031;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19081038	19081169	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=NA12877_ch_T0001267;gene_id=NA12877_ch_G0000433;Parent=NA12877_ch_T0001267;transcript_name=NA12877_ch_T0001267;gene_name=ENSG00000307031;ID=exon:NA12877_ch_T0001267:1;Name=ENSG00000307031;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19081170	19083944	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=NA12877_ch_T0001267;gene_id=NA12877_ch_G0000433;Parent=NA12877_ch_T0001267;transcript_name=NA12877_ch_T0001267;gene_name=ENSG00000307031;ID=intron:NA12877_ch_T0001267:1;Name=ENSG00000307031;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19083945	19084186	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=NA12877_ch_T0001267;gene_id=NA12877_ch_G0000433;Parent=NA12877_ch_T0001267;transcript_name=NA12877_ch_T0001267;gene_name=ENSG00000307031;ID=exon:NA12877_ch_T0001267:2;Name=ENSG00000307031;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19081038	19087349	.	+	.	source_gene_common_name=USP9YP14;source_gene=ENSG00000227494.2;gene_id=NA12877_ch_G0000434;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=USP9YP14;gene_sources=liftoff;ID=NA12877_ch_G0000434;Name=USP9YP14
NA12877_chrY	CAT	transcript	19081038	19087349	1000	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=NA12877_ch_T0001268;gene_id=NA12877_ch_G0000434;Parent=NA12877_ch_G0000434;transcript_name=NA12877_ch_T0001268;gene_name=USP9YP14;ID=NA12877_ch_T0001268;Name=USP9YP14
NA12877_chrY	CAT	exon	19081038	19081171	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=NA12877_ch_T0001268;gene_id=NA12877_ch_G0000434;Parent=NA12877_ch_T0001268;transcript_name=NA12877_ch_T0001268;gene_name=USP9YP14;ID=exon:NA12877_ch_T0001268:0;Name=USP9YP14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19081172	19086142	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=NA12877_ch_T0001268;gene_id=NA12877_ch_G0000434;Parent=NA12877_ch_T0001268;transcript_name=NA12877_ch_T0001268;gene_name=USP9YP14;ID=intron:NA12877_ch_T0001268:0;Name=USP9YP14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19086143	19086299	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=NA12877_ch_T0001268;gene_id=NA12877_ch_G0000434;Parent=NA12877_ch_T0001268;transcript_name=NA12877_ch_T0001268;gene_name=USP9YP14;ID=exon:NA12877_ch_T0001268:1;Name=USP9YP14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19086300	19086701	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=NA12877_ch_T0001268;gene_id=NA12877_ch_G0000434;Parent=NA12877_ch_T0001268;transcript_name=NA12877_ch_T0001268;gene_name=USP9YP14;ID=intron:NA12877_ch_T0001268:1;Name=USP9YP14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19086702	19086877	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=NA12877_ch_T0001268;gene_id=NA12877_ch_G0000434;Parent=NA12877_ch_T0001268;transcript_name=NA12877_ch_T0001268;gene_name=USP9YP14;ID=exon:NA12877_ch_T0001268:2;Name=USP9YP14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19086878	19087253	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=NA12877_ch_T0001268;gene_id=NA12877_ch_G0000434;Parent=NA12877_ch_T0001268;transcript_name=NA12877_ch_T0001268;gene_name=USP9YP14;ID=intron:NA12877_ch_T0001268:2;Name=USP9YP14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19087254	19087349	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=NA12877_ch_T0001268;gene_id=NA12877_ch_G0000434;Parent=NA12877_ch_T0001268;transcript_name=NA12877_ch_T0001268;gene_name=USP9YP14;ID=exon:NA12877_ch_T0001268:3;Name=USP9YP14;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19086460	19086621	.	+	.	source_gene_common_name=RNU1-48P;source_gene=ENSG00000252209.1;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;gene_id=NA12877_ch_G0000435;gene_biotype=snRNA;gene_name=RNU1-48P;gene_sources=liftoff;ID=NA12877_ch_G0000435;Name=RNU1-48P
NA12877_chrY	CAT	transcript	19086460	19086621	1000	+	.	source_transcript=ENST00000516400.1;source_transcript_name=RNU1-48P-201;source_gene=ENSG00000252209.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252209.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516400.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516400.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-48P;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;transcript_id=NA12877_ch_T0001269;gene_id=NA12877_ch_G0000435;Parent=NA12877_ch_G0000435;transcript_name=NA12877_ch_T0001269;gene_name=RNU1-48P;ID=NA12877_ch_T0001269;Name=RNU1-48P
NA12877_chrY	CAT	exon	19086460	19086621	.	+	.	source_transcript=ENST00000516400.1;source_transcript_name=RNU1-48P-201;source_gene=ENSG00000252209.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252209.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516400.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516400.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-48P;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;transcript_id=NA12877_ch_T0001269;gene_id=NA12877_ch_G0000435;Parent=NA12877_ch_T0001269;transcript_name=NA12877_ch_T0001269;gene_name=RNU1-48P;ID=exon:NA12877_ch_T0001269:0;Name=RNU1-48P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19090864	19094238	.	-	.	source_gene_common_name=USP9YP5;source_gene=ENSG00000249634.1;alternative_source_transcripts=ENST00000511770.1;gene_id=NA12877_ch_G0000436;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP5;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000436;Name=USP9YP5
NA12877_chrY	CAT	transcript	19090864	19094238	1000	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=NA12877_ch_T0001270;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_G0000436;transcript_name=NA12877_ch_T0001270;gene_name=USP9YP5;ID=NA12877_ch_T0001270;Name=USP9YP5
NA12877_chrY	CAT	exon	19090864	19091054	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=NA12877_ch_T0001270;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_T0001270;transcript_name=NA12877_ch_T0001270;gene_name=USP9YP5;ID=exon:NA12877_ch_T0001270:0;Name=USP9YP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19091055	19092958	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=NA12877_ch_T0001270;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_T0001270;transcript_name=NA12877_ch_T0001270;gene_name=USP9YP5;ID=intron:NA12877_ch_T0001270:0;Name=USP9YP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19092959	19093248	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=NA12877_ch_T0001270;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_T0001270;transcript_name=NA12877_ch_T0001270;gene_name=USP9YP5;ID=exon:NA12877_ch_T0001270:1;Name=USP9YP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19093249	19094017	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=NA12877_ch_T0001270;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_T0001270;transcript_name=NA12877_ch_T0001270;gene_name=USP9YP5;ID=intron:NA12877_ch_T0001270:1;Name=USP9YP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19094018	19094238	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=NA12877_ch_T0001270;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_T0001270;transcript_name=NA12877_ch_T0001270;gene_name=USP9YP5;ID=exon:NA12877_ch_T0001270:2;Name=USP9YP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19090864	19094238	1000	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=NA12877_ch_T0001271;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_G0000436;transcript_name=NA12877_ch_T0001271;gene_name=USP9YP5;ID=NA12877_ch_T0001271;Name=USP9YP5
NA12877_chrY	CAT	exon	19090864	19091054	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=NA12877_ch_T0001271;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_T0001271;transcript_name=NA12877_ch_T0001271;gene_name=USP9YP5;ID=exon:NA12877_ch_T0001271:0;Name=USP9YP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19091055	19092958	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=NA12877_ch_T0001271;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_T0001271;transcript_name=NA12877_ch_T0001271;gene_name=USP9YP5;ID=intron:NA12877_ch_T0001271:0;Name=USP9YP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19092959	19093051	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=NA12877_ch_T0001271;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_T0001271;transcript_name=NA12877_ch_T0001271;gene_name=USP9YP5;ID=exon:NA12877_ch_T0001271:1;Name=USP9YP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19093052	19093123	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=NA12877_ch_T0001271;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_T0001271;transcript_name=NA12877_ch_T0001271;gene_name=USP9YP5;ID=intron:NA12877_ch_T0001271:1;Name=USP9YP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19093124	19093248	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=NA12877_ch_T0001271;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_T0001271;transcript_name=NA12877_ch_T0001271;gene_name=USP9YP5;ID=exon:NA12877_ch_T0001271:2;Name=USP9YP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19093249	19094017	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=NA12877_ch_T0001271;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_T0001271;transcript_name=NA12877_ch_T0001271;gene_name=USP9YP5;ID=intron:NA12877_ch_T0001271:2;Name=USP9YP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19094018	19094238	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=NA12877_ch_T0001271;gene_id=NA12877_ch_G0000436;Parent=NA12877_ch_T0001271;transcript_name=NA12877_ch_T0001271;gene_name=USP9YP5;ID=exon:NA12877_ch_T0001271:3;Name=USP9YP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19091689	19147638	.	+	.	source_gene_common_name=ENSG00000251510;source_gene=ENSG00000251510.2;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;gene_id=NA12877_ch_G0000437;gene_biotype=lncRNA;gene_name=ENSG00000251510;gene_sources=liftoff;ID=NA12877_ch_G0000437;Name=ENSG00000251510
NA12877_chrY	CAT	transcript	19091689	19147638	1000	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=NA12877_ch_T0001272;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_G0000437;transcript_name=NA12877_ch_T0001272;gene_name=ENSG00000251510;ID=NA12877_ch_T0001272;Name=ENSG00000251510
NA12877_chrY	CAT	exon	19091689	19091766	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=NA12877_ch_T0001272;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_T0001272;transcript_name=NA12877_ch_T0001272;gene_name=ENSG00000251510;ID=exon:NA12877_ch_T0001272:0;Name=ENSG00000251510;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19091767	19100558	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=NA12877_ch_T0001272;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_T0001272;transcript_name=NA12877_ch_T0001272;gene_name=ENSG00000251510;ID=intron:NA12877_ch_T0001272:0;Name=ENSG00000251510;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19100559	19100990	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=NA12877_ch_T0001272;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_T0001272;transcript_name=NA12877_ch_T0001272;gene_name=ENSG00000251510;ID=exon:NA12877_ch_T0001272:1;Name=ENSG00000251510;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19100991	19129578	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=NA12877_ch_T0001272;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_T0001272;transcript_name=NA12877_ch_T0001272;gene_name=ENSG00000251510;ID=intron:NA12877_ch_T0001272:1;Name=ENSG00000251510;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19129579	19129776	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=NA12877_ch_T0001272;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_T0001272;transcript_name=NA12877_ch_T0001272;gene_name=ENSG00000251510;ID=exon:NA12877_ch_T0001272:2;Name=ENSG00000251510;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19129777	19130426	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=NA12877_ch_T0001272;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_T0001272;transcript_name=NA12877_ch_T0001272;gene_name=ENSG00000251510;ID=intron:NA12877_ch_T0001272:2;Name=ENSG00000251510;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19130427	19130535	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=NA12877_ch_T0001272;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_T0001272;transcript_name=NA12877_ch_T0001272;gene_name=ENSG00000251510;ID=exon:NA12877_ch_T0001272:3;Name=ENSG00000251510;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19130536	19146972	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=NA12877_ch_T0001272;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_T0001272;transcript_name=NA12877_ch_T0001272;gene_name=ENSG00000251510;ID=intron:NA12877_ch_T0001272:3;Name=ENSG00000251510;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19146973	19147638	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=NA12877_ch_T0001272;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_T0001272;transcript_name=NA12877_ch_T0001272;gene_name=ENSG00000251510;ID=exon:NA12877_ch_T0001272:4;Name=ENSG00000251510;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19100769	19113106	1000	+	.	source_transcript=ENST00000807038.1;source_transcript_name=ENST00000807038;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807038.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000807038.1,ENST00000807038.1;transcript_id=NA12877_ch_T0001273;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_G0000437;transcript_name=NA12877_ch_T0001273;gene_name=ENSG00000251510;ID=NA12877_ch_T0001273;Name=ENSG00000251510
NA12877_chrY	CAT	exon	19100769	19100990	.	+	.	source_transcript=ENST00000807038.1;source_transcript_name=ENST00000807038;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807038.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000807038.1,ENST00000807038.1;transcript_id=NA12877_ch_T0001273;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_T0001273;transcript_name=NA12877_ch_T0001273;gene_name=ENSG00000251510;ID=exon:NA12877_ch_T0001273:0;Name=ENSG00000251510;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19100991	19112879	.	+	.	source_transcript=ENST00000807038.1;source_transcript_name=ENST00000807038;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807038.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000807038.1,ENST00000807038.1;transcript_id=NA12877_ch_T0001273;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_T0001273;transcript_name=NA12877_ch_T0001273;gene_name=ENSG00000251510;ID=intron:NA12877_ch_T0001273:0;Name=ENSG00000251510;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19112880	19113106	.	+	.	source_transcript=ENST00000807038.1;source_transcript_name=ENST00000807038;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807038.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000807038.1,ENST00000807038.1;transcript_id=NA12877_ch_T0001273;gene_id=NA12877_ch_G0000437;Parent=NA12877_ch_T0001273;transcript_name=NA12877_ch_T0001273;gene_name=ENSG00000251510;ID=exon:NA12877_ch_T0001273:1;Name=ENSG00000251510;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19108516	19109007	.	+	.	source_gene_common_name=XKRYP1;source_gene=ENSG00000238067.1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;gene_id=NA12877_ch_G0000438;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP1;gene_sources=liftoff;ID=NA12877_ch_G0000438;Name=XKRYP1
NA12877_chrY	CAT	transcript	19108516	19109007	1000	+	.	source_transcript=ENST00000423438.1;source_transcript_name=XKRYP1-201;source_gene=ENSG00000238067.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238067.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423438.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;transcript_id=NA12877_ch_T0001274;gene_id=NA12877_ch_G0000438;Parent=NA12877_ch_G0000438;transcript_name=NA12877_ch_T0001274;gene_name=XKRYP1;ID=NA12877_ch_T0001274;Name=XKRYP1
NA12877_chrY	CAT	exon	19108516	19109007	.	+	.	source_transcript=ENST00000423438.1;source_transcript_name=XKRYP1-201;source_gene=ENSG00000238067.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238067.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423438.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;transcript_id=NA12877_ch_T0001274;gene_id=NA12877_ch_G0000438;Parent=NA12877_ch_T0001274;transcript_name=NA12877_ch_T0001274;gene_name=XKRYP1;ID=exon:NA12877_ch_T0001274:0;Name=XKRYP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19132265	19132595	.	-	.	source_gene_common_name=ELOCP7;source_gene=ENSG00000230377.1;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;gene_id=NA12877_ch_G0000439;gene_biotype=processed_pseudogene;gene_name=ELOCP7;gene_sources=liftoff;ID=NA12877_ch_G0000439;Name=ELOCP7
NA12877_chrY	CAT	transcript	19132265	19132595	1000	-	.	source_transcript=ENST00000439968.1;source_transcript_name=ELOCP7-201;source_gene=ENSG00000230377.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230377.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439968.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP7;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;transcript_id=NA12877_ch_T0001275;gene_id=NA12877_ch_G0000439;Parent=NA12877_ch_G0000439;transcript_name=NA12877_ch_T0001275;gene_name=ELOCP7;ID=NA12877_ch_T0001275;Name=ELOCP7
NA12877_chrY	CAT	exon	19132265	19132595	.	-	.	source_transcript=ENST00000439968.1;source_transcript_name=ELOCP7-201;source_gene=ENSG00000230377.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230377.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439968.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP7;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;transcript_id=NA12877_ch_T0001275;gene_id=NA12877_ch_G0000439;Parent=NA12877_ch_T0001275;transcript_name=NA12877_ch_T0001275;gene_name=ELOCP7;ID=exon:NA12877_ch_T0001275:0;Name=ELOCP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19140919	19144067	.	+	.	source_gene_common_name=USP9YP1;source_gene=ENSG00000250951.1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;gene_id=NA12877_ch_G0000440;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP1;gene_sources=liftoff;ID=NA12877_ch_G0000440;Name=USP9YP1
NA12877_chrY	CAT	transcript	19140919	19144067	1000	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=NA12877_ch_T0001276;gene_id=NA12877_ch_G0000440;Parent=NA12877_ch_G0000440;transcript_name=NA12877_ch_T0001276;gene_name=USP9YP1;ID=NA12877_ch_T0001276;Name=USP9YP1
NA12877_chrY	CAT	exon	19140919	19141048	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=NA12877_ch_T0001276;gene_id=NA12877_ch_G0000440;Parent=NA12877_ch_T0001276;transcript_name=NA12877_ch_T0001276;gene_name=USP9YP1;ID=exon:NA12877_ch_T0001276:0;Name=USP9YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19141049	19142784	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=NA12877_ch_T0001276;gene_id=NA12877_ch_G0000440;Parent=NA12877_ch_T0001276;transcript_name=NA12877_ch_T0001276;gene_name=USP9YP1;ID=intron:NA12877_ch_T0001276:0;Name=USP9YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19142785	19143531	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=NA12877_ch_T0001276;gene_id=NA12877_ch_G0000440;Parent=NA12877_ch_T0001276;transcript_name=NA12877_ch_T0001276;gene_name=USP9YP1;ID=exon:NA12877_ch_T0001276:1;Name=USP9YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19143532	19143942	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=NA12877_ch_T0001276;gene_id=NA12877_ch_G0000440;Parent=NA12877_ch_T0001276;transcript_name=NA12877_ch_T0001276;gene_name=USP9YP1;ID=intron:NA12877_ch_T0001276:1;Name=USP9YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19143943	19144067	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=NA12877_ch_T0001276;gene_id=NA12877_ch_G0000440;Parent=NA12877_ch_T0001276;transcript_name=NA12877_ch_T0001276;gene_name=USP9YP1;ID=exon:NA12877_ch_T0001276:2;Name=USP9YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19146631	19188908	.	+	.	source_gene_common_name=HSFY1;source_gene=ENSG00000172468.14;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;gene_id=NA12877_ch_G0000441;gene_biotype=protein_coding;gene_name=HSFY1;gene_sources=liftoff;ID=NA12877_ch_G0000441;Name=HSFY1
NA12877_chrY	CAT	transcript	19146631	19188908	100	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=NA12877_ch_T0001277;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_G0000441;transcript_name=NA12877_ch_T0001277;gene_name=HSFY1;ID=NA12877_ch_T0001277;Name=HSFY1
NA12877_chrY	CAT	exon	19146631	19147240	.	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=NA12877_ch_T0001277;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001277;transcript_name=NA12877_ch_T0001277;gene_name=HSFY1;ID=exon:NA12877_ch_T0001277:0;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19146728	19147240	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=NA12877_ch_T0001277;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001277;transcript_name=NA12877_ch_T0001277;gene_name=HSFY1;ID=CDS:NA12877_ch_T0001277:0;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	19146728	19146730	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=NA12877_ch_T0001277;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001277;transcript_name=NA12877_ch_T0001277;gene_name=HSFY1;ID=start_codon:NA12877_ch_T0001277;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19147241	19188480	.	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=NA12877_ch_T0001277;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001277;transcript_name=NA12877_ch_T0001277;gene_name=HSFY1;ID=intron:NA12877_ch_T0001277:0;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19188481	19188908	.	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=NA12877_ch_T0001277;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001277;transcript_name=NA12877_ch_T0001277;gene_name=HSFY1;ID=exon:NA12877_ch_T0001277:1;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19188481	19188579	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=NA12877_ch_T0001277;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001277;transcript_name=NA12877_ch_T0001277;gene_name=HSFY1;ID=CDS:NA12877_ch_T0001277:1;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	19188577	19188579	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=NA12877_ch_T0001277;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001277;transcript_name=NA12877_ch_T0001277;gene_name=HSFY1;ID=stop_codon:NA12877_ch_T0001277;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19146631	19188908	1000	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_G0000441;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=NA12877_ch_T0001278;Name=HSFY1
NA12877_chrY	CAT	exon	19146631	19147240	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=exon:NA12877_ch_T0001278:0;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19146728	19147240	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=CDS:NA12877_ch_T0001278:0;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	19146728	19146730	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=start_codon:NA12877_ch_T0001278;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19147241	19150053	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=intron:NA12877_ch_T0001278:0;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19150054	19150163	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=exon:NA12877_ch_T0001278:1;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19150054	19150163	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=CDS:NA12877_ch_T0001278:1;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19150164	19150726	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=intron:NA12877_ch_T0001278:1;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19150727	19150813	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=exon:NA12877_ch_T0001278:2;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19150727	19150748	.	+	1	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=CDS:NA12877_ch_T0001278:2;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	19150746	19150748	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=stop_codon:NA12877_ch_T0001278;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19150814	19151860	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=intron:NA12877_ch_T0001278:2;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19151861	19152015	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=exon:NA12877_ch_T0001278:3;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19152016	19182617	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=intron:NA12877_ch_T0001278:3;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19182618	19182703	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=exon:NA12877_ch_T0001278:4;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19182704	19188480	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=intron:NA12877_ch_T0001278:4;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19188481	19188908	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=NA12877_ch_T0001278;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001278;transcript_name=NA12877_ch_T0001278;gene_name=HSFY1;ID=exon:NA12877_ch_T0001278:5;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19146660	19148532	100	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=NA12877_ch_T0001279;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_G0000441;transcript_name=NA12877_ch_T0001279;gene_name=HSFY1;ID=NA12877_ch_T0001279;Name=HSFY1
NA12877_chrY	CAT	exon	19146660	19147240	.	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=NA12877_ch_T0001279;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001279;transcript_name=NA12877_ch_T0001279;gene_name=HSFY1;ID=exon:NA12877_ch_T0001279:0;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19146728	19147240	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=NA12877_ch_T0001279;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001279;transcript_name=NA12877_ch_T0001279;gene_name=HSFY1;ID=CDS:NA12877_ch_T0001279:0;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	19146728	19146730	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=NA12877_ch_T0001279;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001279;transcript_name=NA12877_ch_T0001279;gene_name=HSFY1;ID=start_codon:NA12877_ch_T0001279;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19147241	19147718	.	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=NA12877_ch_T0001279;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001279;transcript_name=NA12877_ch_T0001279;gene_name=HSFY1;ID=intron:NA12877_ch_T0001279:0;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19147719	19148532	.	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=NA12877_ch_T0001279;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001279;transcript_name=NA12877_ch_T0001279;gene_name=HSFY1;ID=exon:NA12877_ch_T0001279:1;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19147719	19148411	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=NA12877_ch_T0001279;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001279;transcript_name=NA12877_ch_T0001279;gene_name=HSFY1;ID=CDS:NA12877_ch_T0001279:1;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	19148409	19148411	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=NA12877_ch_T0001279;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001279;transcript_name=NA12877_ch_T0001279;gene_name=HSFY1;ID=stop_codon:NA12877_ch_T0001279;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19146660	19151409	100	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=NA12877_ch_T0001280;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_G0000441;transcript_name=NA12877_ch_T0001280;gene_name=HSFY1;ID=NA12877_ch_T0001280;Name=HSFY1
NA12877_chrY	CAT	exon	19146660	19147240	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=NA12877_ch_T0001280;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001280;transcript_name=NA12877_ch_T0001280;gene_name=HSFY1;ID=exon:NA12877_ch_T0001280:0;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19146728	19147240	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=NA12877_ch_T0001280;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001280;transcript_name=NA12877_ch_T0001280;gene_name=HSFY1;ID=CDS:NA12877_ch_T0001280:0;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	19146728	19146730	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=NA12877_ch_T0001280;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001280;transcript_name=NA12877_ch_T0001280;gene_name=HSFY1;ID=start_codon:NA12877_ch_T0001280;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19147241	19150053	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=NA12877_ch_T0001280;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001280;transcript_name=NA12877_ch_T0001280;gene_name=HSFY1;ID=intron:NA12877_ch_T0001280:0;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19150054	19150163	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=NA12877_ch_T0001280;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001280;transcript_name=NA12877_ch_T0001280;gene_name=HSFY1;ID=exon:NA12877_ch_T0001280:1;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19150054	19150163	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=NA12877_ch_T0001280;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001280;transcript_name=NA12877_ch_T0001280;gene_name=HSFY1;ID=CDS:NA12877_ch_T0001280:1;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19150164	19150726	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=NA12877_ch_T0001280;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001280;transcript_name=NA12877_ch_T0001280;gene_name=HSFY1;ID=intron:NA12877_ch_T0001280:1;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19150727	19151409	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=NA12877_ch_T0001280;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001280;transcript_name=NA12877_ch_T0001280;gene_name=HSFY1;ID=exon:NA12877_ch_T0001280:2;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19150727	19150748	.	+	1	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=NA12877_ch_T0001280;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001280;transcript_name=NA12877_ch_T0001280;gene_name=HSFY1;ID=CDS:NA12877_ch_T0001280:2;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	19150746	19150748	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=NA12877_ch_T0001280;gene_id=NA12877_ch_G0000441;Parent=NA12877_ch_T0001280;transcript_name=NA12877_ch_T0001280;gene_name=HSFY1;ID=stop_codon:NA12877_ch_T0001280;Name=HSFY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19178362	19178505	.	+	.	source_gene_common_name=GPM6BP1;source_gene=ENSG00000230458.1;alternative_source_transcripts=ENST00000446387.1,ENST00000446387.1;gene_id=NA12877_ch_G0000442;gene_biotype=unprocessed_pseudogene;gene_name=GPM6BP1;gene_sources=liftoff;ID=NA12877_ch_G0000442;Name=GPM6BP1
NA12877_chrY	CAT	transcript	19178362	19178505	1000	+	.	source_transcript=ENST00000446387.1;source_transcript_name=GPM6BP1-201;source_gene=ENSG00000230458.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230458.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446387.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP1;alternative_source_transcripts=ENST00000446387.1,ENST00000446387.1;transcript_id=NA12877_ch_T0001281;gene_id=NA12877_ch_G0000442;Parent=NA12877_ch_G0000442;transcript_name=NA12877_ch_T0001281;gene_name=GPM6BP1;ID=NA12877_ch_T0001281;Name=GPM6BP1
NA12877_chrY	CAT	exon	19178362	19178505	.	+	.	source_transcript=ENST00000446387.1;source_transcript_name=GPM6BP1-201;source_gene=ENSG00000230458.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230458.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446387.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP1;alternative_source_transcripts=ENST00000446387.1,ENST00000446387.1;transcript_id=NA12877_ch_T0001281;gene_id=NA12877_ch_G0000442;Parent=NA12877_ch_T0001281;transcript_name=NA12877_ch_T0001281;gene_name=GPM6BP1;ID=exon:NA12877_ch_T0001281:0;Name=GPM6BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19181151	19198056	.	-	.	source_gene_common_name=TTTY9B;source_gene=ENSG00000131007.10;gene_id=NA12877_ch_G0000443;gene_biotype=lncRNA;gene_name=TTTY9B;gene_sources=liftoff;ID=NA12877_ch_G0000443;Name=TTTY9B
NA12877_chrY	CAT	transcript	19181151	19188657	1000	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001282;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_G0000443;transcript_name=NA12877_ch_T0001282;gene_name=TTTY9B;ID=NA12877_ch_T0001282;Name=TTTY9B
NA12877_chrY	CAT	exon	19181151	19182293	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001282;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001282;transcript_name=NA12877_ch_T0001282;gene_name=TTTY9B;ID=exon:NA12877_ch_T0001282:0;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19182294	19187356	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001282;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001282;transcript_name=NA12877_ch_T0001282;gene_name=TTTY9B;ID=intron:NA12877_ch_T0001282:0;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19187357	19187493	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001282;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001282;transcript_name=NA12877_ch_T0001282;gene_name=TTTY9B;ID=exon:NA12877_ch_T0001282:1;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19187494	19188075	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001282;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001282;transcript_name=NA12877_ch_T0001282;gene_name=TTTY9B;ID=intron:NA12877_ch_T0001282:1;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19188076	19188189	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001282;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001282;transcript_name=NA12877_ch_T0001282;gene_name=TTTY9B;ID=exon:NA12877_ch_T0001282:2;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19188190	19188550	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001282;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001282;transcript_name=NA12877_ch_T0001282;gene_name=TTTY9B;ID=intron:NA12877_ch_T0001282:2;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19188551	19188657	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001282;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001282;transcript_name=NA12877_ch_T0001282;gene_name=TTTY9B;ID=exon:NA12877_ch_T0001282:3;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19181151	19190466	1000	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001283;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_G0000443;transcript_name=NA12877_ch_T0001283;gene_name=TTTY9B;ID=NA12877_ch_T0001283;Name=TTTY9B
NA12877_chrY	CAT	exon	19181151	19182293	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001283;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001283;transcript_name=NA12877_ch_T0001283;gene_name=TTTY9B;ID=exon:NA12877_ch_T0001283:0;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19182294	19187356	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001283;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001283;transcript_name=NA12877_ch_T0001283;gene_name=TTTY9B;ID=intron:NA12877_ch_T0001283:0;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19187357	19187493	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001283;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001283;transcript_name=NA12877_ch_T0001283;gene_name=TTTY9B;ID=exon:NA12877_ch_T0001283:1;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19187494	19188075	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001283;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001283;transcript_name=NA12877_ch_T0001283;gene_name=TTTY9B;ID=intron:NA12877_ch_T0001283:1;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19188076	19188189	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001283;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001283;transcript_name=NA12877_ch_T0001283;gene_name=TTTY9B;ID=exon:NA12877_ch_T0001283:2;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19188190	19188550	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001283;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001283;transcript_name=NA12877_ch_T0001283;gene_name=TTTY9B;ID=intron:NA12877_ch_T0001283:2;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19188551	19188651	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001283;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001283;transcript_name=NA12877_ch_T0001283;gene_name=TTTY9B;ID=exon:NA12877_ch_T0001283:3;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19188652	19190324	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001283;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001283;transcript_name=NA12877_ch_T0001283;gene_name=TTTY9B;ID=intron:NA12877_ch_T0001283:3;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19190325	19190466	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001283;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001283;transcript_name=NA12877_ch_T0001283;gene_name=TTTY9B;ID=exon:NA12877_ch_T0001283:4;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19189899	19198056	1000	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001285;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_G0000443;transcript_name=NA12877_ch_T0001285;gene_name=TTTY9B;ID=NA12877_ch_T0001285;Name=TTTY9B
NA12877_chrY	CAT	exon	19189899	19190544	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001285;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001285;transcript_name=NA12877_ch_T0001285;gene_name=TTTY9B;ID=exon:NA12877_ch_T0001285:0;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19190545	19197356	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001285;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001285;transcript_name=NA12877_ch_T0001285;gene_name=TTTY9B;ID=intron:NA12877_ch_T0001285:0;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19197357	19197618	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001285;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001285;transcript_name=NA12877_ch_T0001285;gene_name=TTTY9B;ID=exon:NA12877_ch_T0001285:1;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19197619	19197799	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001285;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001285;transcript_name=NA12877_ch_T0001285;gene_name=TTTY9B;ID=intron:NA12877_ch_T0001285:1;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19197800	19198056	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=NA12877_ch_T0001285;gene_id=NA12877_ch_G0000443;Parent=NA12877_ch_T0001285;transcript_name=NA12877_ch_T0001285;gene_name=TTTY9B;ID=exon:NA12877_ch_T0001285:2;Name=TTTY9B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19182008	19229022	.	-	.	source_gene_common_name=OFD1P5Y;source_gene=ENSG00000240438.2;gene_id=NA12877_ch_G0000444;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P5Y;gene_sources=liftoff;ID=NA12877_ch_G0000444;Name=OFD1P5Y
NA12877_chrY	CAT	transcript	19182008	19229022	1000	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_G0000444;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=NA12877_ch_T0001284;Name=OFD1P5Y
NA12877_chrY	CAT	exon	19182008	19182301	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:0;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19182302	19182598	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:0;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19182599	19182665	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:1;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19182666	19183854	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:1;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19183855	19184005	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:2;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19184006	19187356	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:2;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19187357	19187493	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:3;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19187494	19188550	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:3;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19188551	19188651	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:4;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19188652	19199164	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:4;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19199165	19199276	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:5;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19199277	19199651	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:5;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19199652	19200278	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:6;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19200279	19202325	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:6;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19202326	19202437	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:7;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19202438	19202971	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:7;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19202972	19203101	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:8;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19203102	19203968	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:8;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19203969	19204104	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:9;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19204105	19205692	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:9;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19205693	19205766	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:10;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19205767	19207402	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:10;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19207403	19207530	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:11;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19207531	19209282	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:11;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19209283	19209389	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:12;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19209390	19212186	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:12;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19212187	19212337	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:13;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19212338	19214142	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:13;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19214143	19214227	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:14;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19214228	19222010	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:14;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19222011	19222182	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:15;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19222183	19226964	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:15;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19226965	19227101	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:16;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19227102	19228917	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=intron:NA12877_ch_T0001284:16;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19228918	19229022	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=NA12877_ch_T0001284;gene_id=NA12877_ch_G0000444;Parent=NA12877_ch_T0001284;transcript_name=NA12877_ch_T0001284;gene_name=OFD1P5Y;ID=exon:NA12877_ch_T0001284:17;Name=OFD1P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19196251	19229038	.	+	.	source_gene_common_name=ENSG00000301107;source_gene=ENSG00000301107.1;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;gene_id=NA12877_ch_G0000445;gene_biotype=lncRNA;gene_name=ENSG00000301107;gene_sources=liftoff;ID=NA12877_ch_G0000445;Name=ENSG00000301107
NA12877_chrY	CAT	transcript	19196251	19229038	1000	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=NA12877_ch_T0001286;gene_id=NA12877_ch_G0000445;Parent=NA12877_ch_G0000445;transcript_name=NA12877_ch_T0001286;gene_name=ENSG00000301107;ID=NA12877_ch_T0001286;Name=ENSG00000301107
NA12877_chrY	CAT	exon	19196251	19196333	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=NA12877_ch_T0001286;gene_id=NA12877_ch_G0000445;Parent=NA12877_ch_T0001286;transcript_name=NA12877_ch_T0001286;gene_name=ENSG00000301107;ID=exon:NA12877_ch_T0001286:0;Name=ENSG00000301107;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19196334	19219759	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=NA12877_ch_T0001286;gene_id=NA12877_ch_G0000445;Parent=NA12877_ch_T0001286;transcript_name=NA12877_ch_T0001286;gene_name=ENSG00000301107;ID=intron:NA12877_ch_T0001286:0;Name=ENSG00000301107;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19219760	19219850	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=NA12877_ch_T0001286;gene_id=NA12877_ch_G0000445;Parent=NA12877_ch_T0001286;transcript_name=NA12877_ch_T0001286;gene_name=ENSG00000301107;ID=exon:NA12877_ch_T0001286:1;Name=ENSG00000301107;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19219851	19228806	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=NA12877_ch_T0001286;gene_id=NA12877_ch_G0000445;Parent=NA12877_ch_T0001286;transcript_name=NA12877_ch_T0001286;gene_name=ENSG00000301107;ID=intron:NA12877_ch_T0001286:1;Name=ENSG00000301107;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19228807	19229038	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=NA12877_ch_T0001286;gene_id=NA12877_ch_G0000445;Parent=NA12877_ch_T0001286;transcript_name=NA12877_ch_T0001286;gene_name=ENSG00000301107;ID=exon:NA12877_ch_T0001286:2;Name=ENSG00000301107;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19249620	19250228	.	+	.	source_gene_common_name=RAB9AP4;source_gene=ENSG00000235479.1;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;gene_id=NA12877_ch_G0000446;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP4;gene_sources=liftoff;ID=NA12877_ch_G0000446;Name=RAB9AP4
NA12877_chrY	CAT	transcript	19249620	19250228	1000	+	.	source_transcript=ENST00000415230.1;source_transcript_name=RAB9AP4-201;source_gene=ENSG00000235479.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235479.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415230.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP4;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;transcript_id=NA12877_ch_T0001287;gene_id=NA12877_ch_G0000446;Parent=NA12877_ch_G0000446;transcript_name=NA12877_ch_T0001287;gene_name=RAB9AP4;ID=NA12877_ch_T0001287;Name=RAB9AP4
NA12877_chrY	CAT	exon	19249620	19250228	.	+	.	source_transcript=ENST00000415230.1;source_transcript_name=RAB9AP4-201;source_gene=ENSG00000235479.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235479.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP4;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;transcript_id=NA12877_ch_T0001287;gene_id=NA12877_ch_G0000446;Parent=NA12877_ch_T0001287;transcript_name=NA12877_ch_T0001287;gene_name=RAB9AP4;ID=exon:NA12877_ch_T0001287:0;Name=RAB9AP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19255471	19256141	.	-	.	source_gene_common_name=TRAPPC2P7;source_gene=ENSG00000249606.1;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;gene_id=NA12877_ch_G0000447;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P7;gene_sources=liftoff;ID=NA12877_ch_G0000447;Name=TRAPPC2P7
NA12877_chrY	CAT	transcript	19255471	19256141	1000	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=NA12877_ch_T0001288;gene_id=NA12877_ch_G0000447;Parent=NA12877_ch_G0000447;transcript_name=NA12877_ch_T0001288;gene_name=TRAPPC2P7;ID=NA12877_ch_T0001288;Name=TRAPPC2P7
NA12877_chrY	CAT	exon	19255471	19255556	.	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=NA12877_ch_T0001288;gene_id=NA12877_ch_G0000447;Parent=NA12877_ch_T0001288;transcript_name=NA12877_ch_T0001288;gene_name=TRAPPC2P7;ID=exon:NA12877_ch_T0001288:0;Name=TRAPPC2P7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19255557	19255996	.	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=NA12877_ch_T0001288;gene_id=NA12877_ch_G0000447;Parent=NA12877_ch_T0001288;transcript_name=NA12877_ch_T0001288;gene_name=TRAPPC2P7;ID=intron:NA12877_ch_T0001288:0;Name=TRAPPC2P7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19255997	19256141	.	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=NA12877_ch_T0001288;gene_id=NA12877_ch_G0000447;Parent=NA12877_ch_T0001288;transcript_name=NA12877_ch_T0001288;gene_name=TRAPPC2P7;ID=exon:NA12877_ch_T0001288:1;Name=TRAPPC2P7;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19273561	19278783	.	+	.	source_gene_common_name=ENSG00000302211;source_gene=ENSG00000302211.1;gene_id=NA12877_ch_G0000448;gene_biotype=lncRNA;gene_name=ENSG00000302211;gene_sources=liftoff;ID=NA12877_ch_G0000448;Name=ENSG00000302211
NA12877_chrY	CAT	transcript	19273561	19275895	1000	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001289;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_G0000448;transcript_name=NA12877_ch_T0001289;gene_name=ENSG00000302211;ID=NA12877_ch_T0001289;Name=ENSG00000302211
NA12877_chrY	CAT	exon	19273561	19273692	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001289;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_T0001289;transcript_name=NA12877_ch_T0001289;gene_name=ENSG00000302211;ID=exon:NA12877_ch_T0001289:0;Name=ENSG00000302211;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19273693	19274166	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001289;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_T0001289;transcript_name=NA12877_ch_T0001289;gene_name=ENSG00000302211;ID=intron:NA12877_ch_T0001289:0;Name=ENSG00000302211;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19274167	19274265	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001289;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_T0001289;transcript_name=NA12877_ch_T0001289;gene_name=ENSG00000302211;ID=exon:NA12877_ch_T0001289:1;Name=ENSG00000302211;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19274266	19275319	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001289;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_T0001289;transcript_name=NA12877_ch_T0001289;gene_name=ENSG00000302211;ID=intron:NA12877_ch_T0001289:1;Name=ENSG00000302211;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19275320	19275895	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001289;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_T0001289;transcript_name=NA12877_ch_T0001289;gene_name=ENSG00000302211;ID=exon:NA12877_ch_T0001289:2;Name=ENSG00000302211;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19273637	19278783	1000	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001290;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_G0000448;transcript_name=NA12877_ch_T0001290;gene_name=ENSG00000302211;ID=NA12877_ch_T0001290;Name=ENSG00000302211
NA12877_chrY	CAT	exon	19273637	19273692	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001290;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_T0001290;transcript_name=NA12877_ch_T0001290;gene_name=ENSG00000302211;ID=exon:NA12877_ch_T0001290:0;Name=ENSG00000302211;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19273693	19274166	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001290;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_T0001290;transcript_name=NA12877_ch_T0001290;gene_name=ENSG00000302211;ID=intron:NA12877_ch_T0001290:0;Name=ENSG00000302211;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19274167	19274265	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001290;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_T0001290;transcript_name=NA12877_ch_T0001290;gene_name=ENSG00000302211;ID=exon:NA12877_ch_T0001290:1;Name=ENSG00000302211;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19274266	19275319	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001290;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_T0001290;transcript_name=NA12877_ch_T0001290;gene_name=ENSG00000302211;ID=intron:NA12877_ch_T0001290:1;Name=ENSG00000302211;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19275320	19275522	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001290;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_T0001290;transcript_name=NA12877_ch_T0001290;gene_name=ENSG00000302211;ID=exon:NA12877_ch_T0001290:2;Name=ENSG00000302211;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19275523	19278544	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001290;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_T0001290;transcript_name=NA12877_ch_T0001290;gene_name=ENSG00000302211;ID=intron:NA12877_ch_T0001290:2;Name=ENSG00000302211;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19278545	19278783	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=NA12877_ch_T0001290;gene_id=NA12877_ch_G0000448;Parent=NA12877_ch_T0001290;transcript_name=NA12877_ch_T0001290;gene_name=ENSG00000302211;ID=exon:NA12877_ch_T0001290:3;Name=ENSG00000302211;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19273983	19338048	.	+	.	source_gene_common_name=OFD1P6Y;source_gene=ENSG00000242153.8;gene_id=NA12877_ch_G0000449;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P6Y;gene_sources=liftoff;ID=NA12877_ch_G0000449;Name=OFD1P6Y
NA12877_chrY	CAT	transcript	19273983	19338048	1000	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_G0000449;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=NA12877_ch_T0001291;Name=OFD1P6Y
NA12877_chrY	CAT	exon	19273983	19273994	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:0;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19273995	19274166	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:0;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19274167	19274265	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:1;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19274266	19275319	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:1;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19275320	19275522	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:2;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19275523	19278391	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:2;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19278392	19278459	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:3;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19278460	19278547	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:3;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19278548	19278578	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:4;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19278579	19291276	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:4;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19291277	19291381	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:5;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19291382	19293197	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:5;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19293198	19293334	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:6;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19293335	19298116	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:6;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19298117	19298288	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:7;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19298289	19310915	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:7;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19310916	19311022	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:8;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19311023	19312775	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:8;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19312776	19312874	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:9;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19312875	19314538	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:9;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19314539	19314612	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:10;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19314613	19316200	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:10;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19316201	19316336	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:11;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19316337	19317203	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:11;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19317204	19317333	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:12;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19317334	19317867	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:12;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19317868	19317979	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:13;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19317980	19320026	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:13;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19320027	19320654	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:14;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19320655	19321028	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:14;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19321029	19321140	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:15;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19321141	19331655	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:15;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19331656	19331756	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:16;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19331757	19332813	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:16;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19332814	19332950	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:17;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19332951	19336301	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:17;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19336302	19336452	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:18;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19336453	19337641	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:18;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19337642	19337708	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:19;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19337709	19338005	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=intron:NA12877_ch_T0001291:19;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19338006	19338048	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=NA12877_ch_T0001291;gene_id=NA12877_ch_G0000449;Parent=NA12877_ch_T0001291;transcript_name=NA12877_ch_T0001291;gene_name=OFD1P6Y;ID=exon:NA12877_ch_T0001291:20;Name=OFD1P6Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19291266	19324085	.	-	.	source_gene_common_name=ENSG00000295232;source_gene=ENSG00000295232.1;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;gene_id=NA12877_ch_G0000450;gene_biotype=lncRNA;gene_name=ENSG00000295232;gene_sources=liftoff;ID=NA12877_ch_G0000450;Name=ENSG00000295232
NA12877_chrY	CAT	transcript	19291266	19324085	1000	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=NA12877_ch_T0001292;gene_id=NA12877_ch_G0000450;Parent=NA12877_ch_G0000450;transcript_name=NA12877_ch_T0001292;gene_name=ENSG00000295232;ID=NA12877_ch_T0001292;Name=ENSG00000295232
NA12877_chrY	CAT	exon	19291266	19291492	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=NA12877_ch_T0001292;gene_id=NA12877_ch_G0000450;Parent=NA12877_ch_T0001292;transcript_name=NA12877_ch_T0001292;gene_name=ENSG00000295232;ID=exon:NA12877_ch_T0001292:0;Name=ENSG00000295232;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19291493	19300448	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=NA12877_ch_T0001292;gene_id=NA12877_ch_G0000450;Parent=NA12877_ch_T0001292;transcript_name=NA12877_ch_T0001292;gene_name=ENSG00000295232;ID=intron:NA12877_ch_T0001292:0;Name=ENSG00000295232;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19300449	19300539	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=NA12877_ch_T0001292;gene_id=NA12877_ch_G0000450;Parent=NA12877_ch_T0001292;transcript_name=NA12877_ch_T0001292;gene_name=ENSG00000295232;ID=exon:NA12877_ch_T0001292:1;Name=ENSG00000295232;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19300540	19323971	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=NA12877_ch_T0001292;gene_id=NA12877_ch_G0000450;Parent=NA12877_ch_T0001292;transcript_name=NA12877_ch_T0001292;gene_name=ENSG00000295232;ID=intron:NA12877_ch_T0001292:1;Name=ENSG00000295232;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19323972	19324085	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=NA12877_ch_T0001292;gene_id=NA12877_ch_G0000450;Parent=NA12877_ch_T0001292;transcript_name=NA12877_ch_T0001292;gene_name=ENSG00000295232;ID=exon:NA12877_ch_T0001292:2;Name=ENSG00000295232;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19329841	19339156	.	+	.	source_gene_common_name=TTTY9A;source_gene=ENSG00000290716.1;gene_id=NA12877_ch_G0000451;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=NA12877_ch_G0000451;Name=TTTY9A
NA12877_chrY	CAT	transcript	19329841	19339156	1000	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=NA12877_ch_T0001293;gene_id=NA12877_ch_G0000451;Parent=NA12877_ch_G0000451;transcript_name=NA12877_ch_T0001293;gene_name=TTTY9A;ID=NA12877_ch_T0001293;Name=TTTY9A
NA12877_chrY	CAT	exon	19329841	19329982	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=NA12877_ch_T0001293;gene_id=NA12877_ch_G0000451;Parent=NA12877_ch_T0001293;transcript_name=NA12877_ch_T0001293;gene_name=TTTY9A;ID=exon:NA12877_ch_T0001293:0;Name=TTTY9A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19329983	19331655	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=NA12877_ch_T0001293;gene_id=NA12877_ch_G0000451;Parent=NA12877_ch_T0001293;transcript_name=NA12877_ch_T0001293;gene_name=TTTY9A;ID=intron:NA12877_ch_T0001293:0;Name=TTTY9A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19331656	19331756	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=NA12877_ch_T0001293;gene_id=NA12877_ch_G0000451;Parent=NA12877_ch_T0001293;transcript_name=NA12877_ch_T0001293;gene_name=TTTY9A;ID=exon:NA12877_ch_T0001293:1;Name=TTTY9A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19331757	19332117	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=NA12877_ch_T0001293;gene_id=NA12877_ch_G0000451;Parent=NA12877_ch_T0001293;transcript_name=NA12877_ch_T0001293;gene_name=TTTY9A;ID=intron:NA12877_ch_T0001293:1;Name=TTTY9A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19332118	19332231	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=NA12877_ch_T0001293;gene_id=NA12877_ch_G0000451;Parent=NA12877_ch_T0001293;transcript_name=NA12877_ch_T0001293;gene_name=TTTY9A;ID=exon:NA12877_ch_T0001293:2;Name=TTTY9A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19332232	19332813	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=NA12877_ch_T0001293;gene_id=NA12877_ch_G0000451;Parent=NA12877_ch_T0001293;transcript_name=NA12877_ch_T0001293;gene_name=TTTY9A;ID=intron:NA12877_ch_T0001293:2;Name=TTTY9A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19332814	19332950	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=NA12877_ch_T0001293;gene_id=NA12877_ch_G0000451;Parent=NA12877_ch_T0001293;transcript_name=NA12877_ch_T0001293;gene_name=TTTY9A;ID=exon:NA12877_ch_T0001293:3;Name=TTTY9A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19332951	19338013	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=NA12877_ch_T0001293;gene_id=NA12877_ch_G0000451;Parent=NA12877_ch_T0001293;transcript_name=NA12877_ch_T0001293;gene_name=TTTY9A;ID=intron:NA12877_ch_T0001293:3;Name=TTTY9A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19338014	19339156	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=NA12877_ch_T0001293;gene_id=NA12877_ch_G0000451;Parent=NA12877_ch_T0001293;transcript_name=NA12877_ch_T0001293;gene_name=TTTY9A;ID=exon:NA12877_ch_T0001293:4;Name=TTTY9A;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19331399	19373708	.	-	.	source_gene_common_name=HSFY2;source_gene=ENSG00000169953.12;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;gene_id=NA12877_ch_G0000452;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff;ID=NA12877_ch_G0000452;Name=HSFY2
NA12877_chrY	CAT	transcript	19331399	19373688	100	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=NA12877_ch_T0001294;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_G0000452;transcript_name=NA12877_ch_T0001294;gene_name=HSFY2;ID=NA12877_ch_T0001294;Name=HSFY2
NA12877_chrY	CAT	exon	19331399	19331826	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=NA12877_ch_T0001294;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001294;transcript_name=NA12877_ch_T0001294;gene_name=HSFY2;ID=exon:NA12877_ch_T0001294:0;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19331728	19331826	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=NA12877_ch_T0001294;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001294;transcript_name=NA12877_ch_T0001294;gene_name=HSFY2;ID=CDS:NA12877_ch_T0001294:0;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	19331728	19331730	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=NA12877_ch_T0001294;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001294;transcript_name=NA12877_ch_T0001294;gene_name=HSFY2;ID=stop_codon:NA12877_ch_T0001294;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19331827	19373078	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=NA12877_ch_T0001294;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001294;transcript_name=NA12877_ch_T0001294;gene_name=HSFY2;ID=intron:NA12877_ch_T0001294:0;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19373079	19373688	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=NA12877_ch_T0001294;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001294;transcript_name=NA12877_ch_T0001294;gene_name=HSFY2;ID=exon:NA12877_ch_T0001294:1;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19373079	19373591	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=NA12877_ch_T0001294;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001294;transcript_name=NA12877_ch_T0001294;gene_name=HSFY2;ID=CDS:NA12877_ch_T0001294:1;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	19373589	19373591	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=NA12877_ch_T0001294;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001294;transcript_name=NA12877_ch_T0001294;gene_name=HSFY2;ID=start_codon:NA12877_ch_T0001294;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19331399	19373688	1000	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=NA12877_ch_T0001295;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_G0000452;transcript_name=NA12877_ch_T0001295;gene_name=HSFY2;ID=NA12877_ch_T0001295;Name=HSFY2
NA12877_chrY	CAT	exon	19331399	19331826	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=NA12877_ch_T0001295;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001295;transcript_name=NA12877_ch_T0001295;gene_name=HSFY2;ID=exon:NA12877_ch_T0001295:0;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19331827	19337603	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=NA12877_ch_T0001295;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001295;transcript_name=NA12877_ch_T0001295;gene_name=HSFY2;ID=intron:NA12877_ch_T0001295:0;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19337604	19337689	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=NA12877_ch_T0001295;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001295;transcript_name=NA12877_ch_T0001295;gene_name=HSFY2;ID=exon:NA12877_ch_T0001295:1;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19337690	19368303	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=NA12877_ch_T0001295;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001295;transcript_name=NA12877_ch_T0001295;gene_name=HSFY2;ID=intron:NA12877_ch_T0001295:1;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19368304	19368458	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=NA12877_ch_T0001295;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001295;transcript_name=NA12877_ch_T0001295;gene_name=HSFY2;ID=exon:NA12877_ch_T0001295:2;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19368459	19369505	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=NA12877_ch_T0001295;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001295;transcript_name=NA12877_ch_T0001295;gene_name=HSFY2;ID=intron:NA12877_ch_T0001295:2;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19369506	19369592	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=NA12877_ch_T0001295;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001295;transcript_name=NA12877_ch_T0001295;gene_name=HSFY2;ID=exon:NA12877_ch_T0001295:3;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19369593	19370155	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=NA12877_ch_T0001295;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001295;transcript_name=NA12877_ch_T0001295;gene_name=HSFY2;ID=intron:NA12877_ch_T0001295:3;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19370156	19370265	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=NA12877_ch_T0001295;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001295;transcript_name=NA12877_ch_T0001295;gene_name=HSFY2;ID=exon:NA12877_ch_T0001295:4;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19370266	19373078	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=NA12877_ch_T0001295;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001295;transcript_name=NA12877_ch_T0001295;gene_name=HSFY2;ID=intron:NA12877_ch_T0001295:4;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19373079	19373688	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=NA12877_ch_T0001295;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001295;transcript_name=NA12877_ch_T0001295;gene_name=HSFY2;ID=exon:NA12877_ch_T0001295:5;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19368894	19373659	100	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=NA12877_ch_T0001297;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_G0000452;transcript_name=NA12877_ch_T0001297;gene_name=HSFY2;ID=NA12877_ch_T0001297;Name=HSFY2
NA12877_chrY	CAT	exon	19368894	19369592	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=NA12877_ch_T0001297;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001297;transcript_name=NA12877_ch_T0001297;gene_name=HSFY2;ID=exon:NA12877_ch_T0001297:0;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19369571	19369592	.	-	1	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=NA12877_ch_T0001297;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001297;transcript_name=NA12877_ch_T0001297;gene_name=HSFY2;ID=CDS:NA12877_ch_T0001297:0;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	19369571	19369573	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=NA12877_ch_T0001297;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001297;transcript_name=NA12877_ch_T0001297;gene_name=HSFY2;ID=stop_codon:NA12877_ch_T0001297;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19369593	19370155	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=NA12877_ch_T0001297;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001297;transcript_name=NA12877_ch_T0001297;gene_name=HSFY2;ID=intron:NA12877_ch_T0001297:0;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19370156	19370265	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=NA12877_ch_T0001297;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001297;transcript_name=NA12877_ch_T0001297;gene_name=HSFY2;ID=exon:NA12877_ch_T0001297:1;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19370156	19370265	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=NA12877_ch_T0001297;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001297;transcript_name=NA12877_ch_T0001297;gene_name=HSFY2;ID=CDS:NA12877_ch_T0001297:1;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19370266	19373078	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=NA12877_ch_T0001297;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001297;transcript_name=NA12877_ch_T0001297;gene_name=HSFY2;ID=intron:NA12877_ch_T0001297:1;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19373079	19373659	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=NA12877_ch_T0001297;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001297;transcript_name=NA12877_ch_T0001297;gene_name=HSFY2;ID=exon:NA12877_ch_T0001297:2;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19373079	19373591	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=NA12877_ch_T0001297;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001297;transcript_name=NA12877_ch_T0001297;gene_name=HSFY2;ID=CDS:NA12877_ch_T0001297:2;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	19373589	19373591	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=NA12877_ch_T0001297;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001297;transcript_name=NA12877_ch_T0001297;gene_name=HSFY2;ID=start_codon:NA12877_ch_T0001297;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19371787	19373708	100	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=NA12877_ch_T0001298;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_G0000452;transcript_name=NA12877_ch_T0001298;gene_name=HSFY2;ID=NA12877_ch_T0001298;Name=HSFY2
NA12877_chrY	CAT	exon	19371787	19372600	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=NA12877_ch_T0001298;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001298;transcript_name=NA12877_ch_T0001298;gene_name=HSFY2;ID=exon:NA12877_ch_T0001298:0;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19371908	19372600	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=NA12877_ch_T0001298;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001298;transcript_name=NA12877_ch_T0001298;gene_name=HSFY2;ID=CDS:NA12877_ch_T0001298:0;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	19371908	19371910	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=NA12877_ch_T0001298;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001298;transcript_name=NA12877_ch_T0001298;gene_name=HSFY2;ID=stop_codon:NA12877_ch_T0001298;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19372601	19373078	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=NA12877_ch_T0001298;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001298;transcript_name=NA12877_ch_T0001298;gene_name=HSFY2;ID=intron:NA12877_ch_T0001298:0;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19373079	19373708	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=NA12877_ch_T0001298;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001298;transcript_name=NA12877_ch_T0001298;gene_name=HSFY2;ID=exon:NA12877_ch_T0001298:1;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	19373079	19373591	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=NA12877_ch_T0001298;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001298;transcript_name=NA12877_ch_T0001298;gene_name=HSFY2;ID=CDS:NA12877_ch_T0001298:1;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	19373589	19373591	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=NA12877_ch_T0001298;gene_id=NA12877_ch_G0000452;Parent=NA12877_ch_T0001298;transcript_name=NA12877_ch_T0001298;gene_name=HSFY2;ID=start_codon:NA12877_ch_T0001298;Name=HSFY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19341802	19341945	.	-	.	source_gene_common_name=GPM6BP2;source_gene=ENSG00000236429.1;alternative_source_transcripts=ENST00000432046.1,ENST00000432046.1;gene_id=NA12877_ch_G0000453;gene_biotype=unprocessed_pseudogene;gene_name=GPM6BP2;gene_sources=liftoff;ID=NA12877_ch_G0000453;Name=GPM6BP2
NA12877_chrY	CAT	transcript	19341802	19341945	1000	-	.	source_transcript=ENST00000432046.1;source_transcript_name=GPM6BP2-201;source_gene=ENSG00000236429.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236429.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432046.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP2;alternative_source_transcripts=ENST00000432046.1,ENST00000432046.1;transcript_id=NA12877_ch_T0001296;gene_id=NA12877_ch_G0000453;Parent=NA12877_ch_G0000453;transcript_name=NA12877_ch_T0001296;gene_name=GPM6BP2;ID=NA12877_ch_T0001296;Name=GPM6BP2
NA12877_chrY	CAT	exon	19341802	19341945	.	-	.	source_transcript=ENST00000432046.1;source_transcript_name=GPM6BP2-201;source_gene=ENSG00000236429.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236429.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432046.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP2;alternative_source_transcripts=ENST00000432046.1,ENST00000432046.1;transcript_id=NA12877_ch_T0001296;gene_id=NA12877_ch_G0000453;Parent=NA12877_ch_T0001296;transcript_name=NA12877_ch_T0001296;gene_name=GPM6BP2;ID=exon:NA12877_ch_T0001296:0;Name=GPM6BP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19372679	19677541	.	-	.	source_gene_common_name=TTTY14;source_gene=ENSG00000176728.11;gene_id=NA12877_ch_G0000454;gene_biotype=lncRNA;gene_name=TTTY14;gene_sources=liftoff;ID=NA12877_ch_G0000454;Name=TTTY14
NA12877_chrY	CAT	transcript	19372679	19419479	1000	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001299;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001299;gene_name=TTTY14;ID=NA12877_ch_T0001299;Name=TTTY14
NA12877_chrY	CAT	exon	19372679	19373346	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001299;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001299;transcript_name=NA12877_ch_T0001299;gene_name=TTTY14;ID=exon:NA12877_ch_T0001299:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19373347	19389783	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001299;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001299;transcript_name=NA12877_ch_T0001299;gene_name=TTTY14;ID=intron:NA12877_ch_T0001299:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19389784	19389892	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001299;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001299;transcript_name=NA12877_ch_T0001299;gene_name=TTTY14;ID=exon:NA12877_ch_T0001299:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19389893	19390542	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001299;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001299;transcript_name=NA12877_ch_T0001299;gene_name=TTTY14;ID=intron:NA12877_ch_T0001299:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19390543	19390740	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001299;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001299;transcript_name=NA12877_ch_T0001299;gene_name=TTTY14;ID=exon:NA12877_ch_T0001299:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19390741	19419327	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001299;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001299;transcript_name=NA12877_ch_T0001299;gene_name=TTTY14;ID=intron:NA12877_ch_T0001299:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419328	19419479	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001299;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001299;transcript_name=NA12877_ch_T0001299;gene_name=TTTY14;ID=exon:NA12877_ch_T0001299:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19372716	19677208	1000	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=NA12877_ch_T0001300;Name=TTTY14
NA12877_chrY	CAT	exon	19372716	19373346	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19373347	19389783	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19389784	19389892	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19389893	19390542	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19390543	19390740	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19390741	19419327	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419328	19419759	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419760	19428561	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19428562	19428696	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19428697	19430412	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19430413	19430616	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19430617	19432978	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19432979	19433080	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19433081	19433733	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19433734	19436385	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19436386	19438729	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19438730	19438850	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19438851	19439159	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19439160	19439291	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19439292	19477050	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19641355	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19641356	19643332	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:11;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19643333	19644647	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:11;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19644648	19644681	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:12;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19644682	19645227	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:12;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19645228	19645277	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:13;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19645278	19677030	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=intron:NA12877_ch_T0001300:13;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677208	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001300;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001300;transcript_name=NA12877_ch_T0001300;gene_name=TTTY14;ID=exon:NA12877_ch_T0001300:14;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19372920	19677060	1000	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=NA12877_ch_T0001301;Name=TTTY14
NA12877_chrY	CAT	exon	19372920	19373346	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=exon:NA12877_ch_T0001301:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19373347	19390542	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=intron:NA12877_ch_T0001301:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19390543	19390740	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=exon:NA12877_ch_T0001301:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19390741	19413588	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=intron:NA12877_ch_T0001301:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19413589	19413716	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=exon:NA12877_ch_T0001301:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19413717	19419327	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=intron:NA12877_ch_T0001301:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419328	19419759	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=exon:NA12877_ch_T0001301:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419760	19428561	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=intron:NA12877_ch_T0001301:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19428562	19428696	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=exon:NA12877_ch_T0001301:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19428697	19430412	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=intron:NA12877_ch_T0001301:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19430413	19430616	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=exon:NA12877_ch_T0001301:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19430617	19472426	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=intron:NA12877_ch_T0001301:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19472427	19472817	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=exon:NA12877_ch_T0001301:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=intron:NA12877_ch_T0001301:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=exon:NA12877_ch_T0001301:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19478187	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=intron:NA12877_ch_T0001301:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19478188	19479814	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=exon:NA12877_ch_T0001301:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19479815	19647708	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=intron:NA12877_ch_T0001301:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19647709	19647793	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=exon:NA12877_ch_T0001301:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19647794	19648758	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=intron:NA12877_ch_T0001301:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19648759	19648898	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=exon:NA12877_ch_T0001301:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19648899	19677030	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=intron:NA12877_ch_T0001301:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677060	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001301;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001301;transcript_name=NA12877_ch_T0001301;gene_name=TTTY14;ID=exon:NA12877_ch_T0001301:11;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19372920	19611327	1000	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=NA12877_ch_T0001302;Name=TTTY14
NA12877_chrY	CAT	exon	19372920	19373346	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=exon:NA12877_ch_T0001302:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19373347	19390542	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=intron:NA12877_ch_T0001302:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19390543	19390740	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=exon:NA12877_ch_T0001302:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19390741	19413588	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=intron:NA12877_ch_T0001302:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19413589	19413716	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=exon:NA12877_ch_T0001302:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19413717	19419327	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=intron:NA12877_ch_T0001302:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419328	19419759	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=exon:NA12877_ch_T0001302:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419760	19428561	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=intron:NA12877_ch_T0001302:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19428562	19428696	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=exon:NA12877_ch_T0001302:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19428697	19430412	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=intron:NA12877_ch_T0001302:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19430413	19430616	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=exon:NA12877_ch_T0001302:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19430617	19472426	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=intron:NA12877_ch_T0001302:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19472427	19472817	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=exon:NA12877_ch_T0001302:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=intron:NA12877_ch_T0001302:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=exon:NA12877_ch_T0001302:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19527060	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=intron:NA12877_ch_T0001302:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19527061	19528358	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=exon:NA12877_ch_T0001302:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19528359	19532727	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=intron:NA12877_ch_T0001302:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532728	19532826	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=exon:NA12877_ch_T0001302:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19611249	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=intron:NA12877_ch_T0001302:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19611250	19611327	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001302;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001302;transcript_name=NA12877_ch_T0001302;gene_name=TTTY14;ID=exon:NA12877_ch_T0001302:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19372920	19676017	1000	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=NA12877_ch_T0001303;Name=TTTY14
NA12877_chrY	CAT	exon	19372920	19373346	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=exon:NA12877_ch_T0001303:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19373347	19390542	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=intron:NA12877_ch_T0001303:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19390543	19390740	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=exon:NA12877_ch_T0001303:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19390741	19413588	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=intron:NA12877_ch_T0001303:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19413589	19413716	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=exon:NA12877_ch_T0001303:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19413717	19419327	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=intron:NA12877_ch_T0001303:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419328	19419759	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=exon:NA12877_ch_T0001303:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419760	19428561	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=intron:NA12877_ch_T0001303:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19428562	19428696	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=exon:NA12877_ch_T0001303:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19428697	19430412	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=intron:NA12877_ch_T0001303:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19430413	19430616	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=exon:NA12877_ch_T0001303:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19430617	19472426	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=intron:NA12877_ch_T0001303:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19472427	19472817	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=exon:NA12877_ch_T0001303:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=intron:NA12877_ch_T0001303:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=exon:NA12877_ch_T0001303:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19641355	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=intron:NA12877_ch_T0001303:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19641356	19641572	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=exon:NA12877_ch_T0001303:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19641573	19643148	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=intron:NA12877_ch_T0001303:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19643149	19644681	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=exon:NA12877_ch_T0001303:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19644682	19668709	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=intron:NA12877_ch_T0001303:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=exon:NA12877_ch_T0001303:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19675926	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=intron:NA12877_ch_T0001303:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19676017	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001303;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001303;transcript_name=NA12877_ch_T0001303;gene_name=TTTY14;ID=exon:NA12877_ch_T0001303:11;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19372920	19677360	1000	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=NA12877_ch_T0001304;Name=TTTY14
NA12877_chrY	CAT	exon	19372920	19373346	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=exon:NA12877_ch_T0001304:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19373347	19390542	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=intron:NA12877_ch_T0001304:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19390543	19390740	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=exon:NA12877_ch_T0001304:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19390741	19413588	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=intron:NA12877_ch_T0001304:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19413589	19413716	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=exon:NA12877_ch_T0001304:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19413717	19419327	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=intron:NA12877_ch_T0001304:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419328	19419759	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=exon:NA12877_ch_T0001304:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419760	19428561	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=intron:NA12877_ch_T0001304:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19428562	19428696	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=exon:NA12877_ch_T0001304:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19428697	19430412	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=intron:NA12877_ch_T0001304:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19430413	19430616	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=exon:NA12877_ch_T0001304:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19430617	19472426	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=intron:NA12877_ch_T0001304:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19472427	19472817	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=exon:NA12877_ch_T0001304:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=intron:NA12877_ch_T0001304:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=exon:NA12877_ch_T0001304:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19478187	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=intron:NA12877_ch_T0001304:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19478188	19479814	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=exon:NA12877_ch_T0001304:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19479815	19647708	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=intron:NA12877_ch_T0001304:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19647709	19647793	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=exon:NA12877_ch_T0001304:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19647794	19668709	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=intron:NA12877_ch_T0001304:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=exon:NA12877_ch_T0001304:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19677253	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=intron:NA12877_ch_T0001304:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677254	19677360	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001304;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001304;transcript_name=NA12877_ch_T0001304;gene_name=TTTY14;ID=exon:NA12877_ch_T0001304:11;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19402530	19677204	1000	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=NA12877_ch_T0001307;Name=TTTY14
NA12877_chrY	CAT	exon	19402530	19404820	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=exon:NA12877_ch_T0001307:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19404821	19419327	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=intron:NA12877_ch_T0001307:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419328	19419759	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=exon:NA12877_ch_T0001307:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419760	19428561	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=intron:NA12877_ch_T0001307:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19428562	19428696	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=exon:NA12877_ch_T0001307:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19428697	19430412	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=intron:NA12877_ch_T0001307:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19430413	19430616	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=exon:NA12877_ch_T0001307:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19430617	19472426	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=intron:NA12877_ch_T0001307:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19472427	19472817	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=exon:NA12877_ch_T0001307:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=intron:NA12877_ch_T0001307:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=exon:NA12877_ch_T0001307:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19668709	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=intron:NA12877_ch_T0001307:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=exon:NA12877_ch_T0001307:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19677030	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=intron:NA12877_ch_T0001307:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677204	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001307;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001307;transcript_name=NA12877_ch_T0001307;gene_name=TTTY14;ID=exon:NA12877_ch_T0001307:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19402530	19677316	1000	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=NA12877_ch_T0001308;Name=TTTY14
NA12877_chrY	CAT	exon	19402530	19404820	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19404821	19413588	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19413589	19413716	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19413717	19419327	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419328	19419433	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419434	19419526	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419527	19419759	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419760	19428561	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19428562	19428696	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19428697	19430412	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19430413	19430616	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19430617	19432978	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19432979	19433080	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19433081	19433733	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19433734	19433896	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19433897	19436297	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19436298	19436383	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19436384	19438729	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19438730	19438850	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19438851	19439159	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19439160	19439291	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19439292	19477050	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:11;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19532727	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:11;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532728	19532826	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:12;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19677030	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=intron:NA12877_ch_T0001308:12;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677316	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001308;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001308;transcript_name=NA12877_ch_T0001308;gene_name=TTTY14;ID=exon:NA12877_ch_T0001308:13;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19402532	19677359	1000	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=NA12877_ch_T0001309;Name=TTTY14
NA12877_chrY	CAT	exon	19402532	19404820	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=exon:NA12877_ch_T0001309:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19404821	19419327	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=intron:NA12877_ch_T0001309:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419328	19419433	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=exon:NA12877_ch_T0001309:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419434	19419526	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=intron:NA12877_ch_T0001309:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419527	19419759	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=exon:NA12877_ch_T0001309:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419760	19428561	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=intron:NA12877_ch_T0001309:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19428562	19428696	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=exon:NA12877_ch_T0001309:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19428697	19436297	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=intron:NA12877_ch_T0001309:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19436298	19436387	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=exon:NA12877_ch_T0001309:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19436388	19439159	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=intron:NA12877_ch_T0001309:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19439160	19439291	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=exon:NA12877_ch_T0001309:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19439292	19532727	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=intron:NA12877_ch_T0001309:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532728	19532826	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=exon:NA12877_ch_T0001309:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19677030	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=intron:NA12877_ch_T0001309:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677359	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001309;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001309;transcript_name=NA12877_ch_T0001309;gene_name=TTTY14;ID=exon:NA12877_ch_T0001309:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19402637	19677328	1000	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=NA12877_ch_T0001310;Name=TTTY14
NA12877_chrY	CAT	exon	19402637	19404820	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19404821	19413588	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19413589	19413716	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19413717	19419327	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419328	19419433	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419434	19419526	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419527	19419759	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419760	19428561	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19428562	19428696	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19428697	19430412	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19430413	19430616	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19430617	19432978	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19432979	19433080	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19433081	19433733	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19433734	19433896	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19433897	19436297	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19436298	19436387	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19436388	19439159	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19439160	19439291	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19439292	19439909	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19439910	19440115	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19440116	19449205	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19449206	19449265	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:11;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19449266	19450659	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:11;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19450660	19450888	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:12;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19450889	19477050	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:12;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:13;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19677030	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=intron:NA12877_ch_T0001310:13;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677328	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001310;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001310;transcript_name=NA12877_ch_T0001310;gene_name=TTTY14;ID=exon:NA12877_ch_T0001310:14;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19406008	19677208	1000	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=NA12877_ch_T0001311;Name=TTTY14
NA12877_chrY	CAT	exon	19406008	19407438	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19407439	19413588	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19413589	19413716	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19413717	19419327	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419328	19419433	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419434	19419526	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19419527	19419759	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19419760	19428561	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19428562	19428696	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19428697	19430412	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19430413	19430616	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19430617	19432978	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19432979	19433080	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19433081	19433733	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19433734	19436385	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19436386	19438729	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19438730	19438850	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19438851	19439159	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:8;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19439160	19439291	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19439292	19477050	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:9;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19641355	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:10;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19641356	19643332	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:11;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19643333	19644647	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:11;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19644648	19644681	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:12;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19644682	19645227	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:12;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19645228	19645277	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:13;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19645278	19677030	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=intron:NA12877_ch_T0001311:13;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677208	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001311;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001311;transcript_name=NA12877_ch_T0001311;gene_name=TTTY14;ID=exon:NA12877_ch_T0001311:14;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19436142	19440131	1000	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001317;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001317;gene_name=TTTY14;ID=NA12877_ch_T0001317;Name=TTTY14
NA12877_chrY	CAT	exon	19436142	19436383	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001317;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001317;transcript_name=NA12877_ch_T0001317;gene_name=TTTY14;ID=exon:NA12877_ch_T0001317:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19436384	19439159	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001317;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001317;transcript_name=NA12877_ch_T0001317;gene_name=TTTY14;ID=intron:NA12877_ch_T0001317:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19439160	19439291	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001317;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001317;transcript_name=NA12877_ch_T0001317;gene_name=TTTY14;ID=exon:NA12877_ch_T0001317:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19439292	19439909	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001317;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001317;transcript_name=NA12877_ch_T0001317;gene_name=TTTY14;ID=intron:NA12877_ch_T0001317:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19439910	19440131	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001317;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001317;transcript_name=NA12877_ch_T0001317;gene_name=TTTY14;ID=exon:NA12877_ch_T0001317:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19675994	1000	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001320;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001320;gene_name=TTTY14;ID=NA12877_ch_T0001320;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001320;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001320;transcript_name=NA12877_ch_T0001320;gene_name=TTTY14;ID=exon:NA12877_ch_T0001320:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001320;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001320;transcript_name=NA12877_ch_T0001320;gene_name=TTTY14;ID=intron:NA12877_ch_T0001320:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001320;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001320;transcript_name=NA12877_ch_T0001320;gene_name=TTTY14;ID=exon:NA12877_ch_T0001320:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19668709	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001320;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001320;transcript_name=NA12877_ch_T0001320;gene_name=TTTY14;ID=intron:NA12877_ch_T0001320:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001320;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001320;transcript_name=NA12877_ch_T0001320;gene_name=TTTY14;ID=exon:NA12877_ch_T0001320:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19673484	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001320;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001320;transcript_name=NA12877_ch_T0001320;gene_name=TTTY14;ID=intron:NA12877_ch_T0001320:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19673485	19673547	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001320;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001320;transcript_name=NA12877_ch_T0001320;gene_name=TTTY14;ID=exon:NA12877_ch_T0001320:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19673548	19675926	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001320;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001320;transcript_name=NA12877_ch_T0001320;gene_name=TTTY14;ID=intron:NA12877_ch_T0001320:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19675994	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001320;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001320;transcript_name=NA12877_ch_T0001320;gene_name=TTTY14;ID=exon:NA12877_ch_T0001320:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19677478	1000	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001321;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001321;gene_name=TTTY14;ID=NA12877_ch_T0001321;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001321;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001321;transcript_name=NA12877_ch_T0001321;gene_name=TTTY14;ID=exon:NA12877_ch_T0001321:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001321;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001321;transcript_name=NA12877_ch_T0001321;gene_name=TTTY14;ID=intron:NA12877_ch_T0001321:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001321;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001321;transcript_name=NA12877_ch_T0001321;gene_name=TTTY14;ID=exon:NA12877_ch_T0001321:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19677030	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001321;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001321;transcript_name=NA12877_ch_T0001321;gene_name=TTTY14;ID=intron:NA12877_ch_T0001321:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677478	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001321;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001321;transcript_name=NA12877_ch_T0001321;gene_name=TTTY14;ID=exon:NA12877_ch_T0001321:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19676010	1000	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=NA12877_ch_T0001322;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=exon:NA12877_ch_T0001322:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=intron:NA12877_ch_T0001322:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=exon:NA12877_ch_T0001322:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19641355	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=intron:NA12877_ch_T0001322:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19641356	19641572	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=exon:NA12877_ch_T0001322:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19641573	19643148	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=intron:NA12877_ch_T0001322:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19643149	19643332	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=exon:NA12877_ch_T0001322:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19643333	19644527	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=intron:NA12877_ch_T0001322:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19644528	19644681	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=exon:NA12877_ch_T0001322:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19644682	19668709	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=intron:NA12877_ch_T0001322:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=exon:NA12877_ch_T0001322:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19675926	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=intron:NA12877_ch_T0001322:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19676010	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001322;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001322;transcript_name=NA12877_ch_T0001322;gene_name=TTTY14;ID=exon:NA12877_ch_T0001322:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19655992	1000	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001323;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001323;gene_name=TTTY14;ID=NA12877_ch_T0001323;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001323;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001323;transcript_name=NA12877_ch_T0001323;gene_name=TTTY14;ID=exon:NA12877_ch_T0001323:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001323;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001323;transcript_name=NA12877_ch_T0001323;gene_name=TTTY14;ID=intron:NA12877_ch_T0001323:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001323;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001323;transcript_name=NA12877_ch_T0001323;gene_name=TTTY14;ID=exon:NA12877_ch_T0001323:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19532635	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001323;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001323;transcript_name=NA12877_ch_T0001323;gene_name=TTTY14;ID=intron:NA12877_ch_T0001323:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532636	19532826	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001323;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001323;transcript_name=NA12877_ch_T0001323;gene_name=TTTY14;ID=exon:NA12877_ch_T0001323:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19655860	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001323;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001323;transcript_name=NA12877_ch_T0001323;gene_name=TTTY14;ID=intron:NA12877_ch_T0001323:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19655861	19655992	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001323;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001323;transcript_name=NA12877_ch_T0001323;gene_name=TTTY14;ID=exon:NA12877_ch_T0001323:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19655964	1000	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001324;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001324;gene_name=TTTY14;ID=NA12877_ch_T0001324;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001324;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001324;transcript_name=NA12877_ch_T0001324;gene_name=TTTY14;ID=exon:NA12877_ch_T0001324:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001324;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001324;transcript_name=NA12877_ch_T0001324;gene_name=TTTY14;ID=intron:NA12877_ch_T0001324:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001324;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001324;transcript_name=NA12877_ch_T0001324;gene_name=TTTY14;ID=exon:NA12877_ch_T0001324:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19532727	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001324;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001324;transcript_name=NA12877_ch_T0001324;gene_name=TTTY14;ID=intron:NA12877_ch_T0001324:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532728	19532826	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001324;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001324;transcript_name=NA12877_ch_T0001324;gene_name=TTTY14;ID=exon:NA12877_ch_T0001324:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19655860	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001324;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001324;transcript_name=NA12877_ch_T0001324;gene_name=TTTY14;ID=intron:NA12877_ch_T0001324:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19655861	19655964	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001324;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001324;transcript_name=NA12877_ch_T0001324;gene_name=TTTY14;ID=exon:NA12877_ch_T0001324:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19676015	1000	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001325;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001325;gene_name=TTTY14;ID=NA12877_ch_T0001325;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001325;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001325;transcript_name=NA12877_ch_T0001325;gene_name=TTTY14;ID=exon:NA12877_ch_T0001325:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001325;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001325;transcript_name=NA12877_ch_T0001325;gene_name=TTTY14;ID=intron:NA12877_ch_T0001325:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001325;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001325;transcript_name=NA12877_ch_T0001325;gene_name=TTTY14;ID=exon:NA12877_ch_T0001325:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19532635	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001325;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001325;transcript_name=NA12877_ch_T0001325;gene_name=TTTY14;ID=intron:NA12877_ch_T0001325:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532636	19532826	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001325;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001325;transcript_name=NA12877_ch_T0001325;gene_name=TTTY14;ID=exon:NA12877_ch_T0001325:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19668709	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001325;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001325;transcript_name=NA12877_ch_T0001325;gene_name=TTTY14;ID=intron:NA12877_ch_T0001325:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001325;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001325;transcript_name=NA12877_ch_T0001325;gene_name=TTTY14;ID=exon:NA12877_ch_T0001325:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19675926	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001325;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001325;transcript_name=NA12877_ch_T0001325;gene_name=TTTY14;ID=intron:NA12877_ch_T0001325:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19676015	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001325;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001325;transcript_name=NA12877_ch_T0001325;gene_name=TTTY14;ID=exon:NA12877_ch_T0001325:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19676093	1000	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001326;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001326;gene_name=TTTY14;ID=NA12877_ch_T0001326;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001326;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001326;transcript_name=NA12877_ch_T0001326;gene_name=TTTY14;ID=exon:NA12877_ch_T0001326:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001326;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001326;transcript_name=NA12877_ch_T0001326;gene_name=TTTY14;ID=intron:NA12877_ch_T0001326:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001326;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001326;transcript_name=NA12877_ch_T0001326;gene_name=TTTY14;ID=exon:NA12877_ch_T0001326:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19668709	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001326;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001326;transcript_name=NA12877_ch_T0001326;gene_name=TTTY14;ID=intron:NA12877_ch_T0001326:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001326;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001326;transcript_name=NA12877_ch_T0001326;gene_name=TTTY14;ID=exon:NA12877_ch_T0001326:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19675926	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001326;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001326;transcript_name=NA12877_ch_T0001326;gene_name=TTTY14;ID=intron:NA12877_ch_T0001326:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19676093	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001326;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001326;transcript_name=NA12877_ch_T0001326;gene_name=TTTY14;ID=exon:NA12877_ch_T0001326:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19677376	1000	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001327;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001327;gene_name=TTTY14;ID=NA12877_ch_T0001327;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001327;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001327;transcript_name=NA12877_ch_T0001327;gene_name=TTTY14;ID=exon:NA12877_ch_T0001327:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001327;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001327;transcript_name=NA12877_ch_T0001327;gene_name=TTTY14;ID=intron:NA12877_ch_T0001327:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001327;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001327;transcript_name=NA12877_ch_T0001327;gene_name=TTTY14;ID=exon:NA12877_ch_T0001327:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19532727	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001327;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001327;transcript_name=NA12877_ch_T0001327;gene_name=TTTY14;ID=intron:NA12877_ch_T0001327:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532728	19532826	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001327;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001327;transcript_name=NA12877_ch_T0001327;gene_name=TTTY14;ID=exon:NA12877_ch_T0001327:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19677253	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001327;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001327;transcript_name=NA12877_ch_T0001327;gene_name=TTTY14;ID=intron:NA12877_ch_T0001327:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677254	19677376	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001327;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001327;transcript_name=NA12877_ch_T0001327;gene_name=TTTY14;ID=exon:NA12877_ch_T0001327:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19676006	1000	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001328;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001328;gene_name=TTTY14;ID=NA12877_ch_T0001328;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001328;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001328;transcript_name=NA12877_ch_T0001328;gene_name=TTTY14;ID=exon:NA12877_ch_T0001328:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001328;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001328;transcript_name=NA12877_ch_T0001328;gene_name=TTTY14;ID=intron:NA12877_ch_T0001328:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001328;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001328;transcript_name=NA12877_ch_T0001328;gene_name=TTTY14;ID=exon:NA12877_ch_T0001328:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19532727	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001328;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001328;transcript_name=NA12877_ch_T0001328;gene_name=TTTY14;ID=intron:NA12877_ch_T0001328:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532728	19532826	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001328;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001328;transcript_name=NA12877_ch_T0001328;gene_name=TTTY14;ID=exon:NA12877_ch_T0001328:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19675926	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001328;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001328;transcript_name=NA12877_ch_T0001328;gene_name=TTTY14;ID=intron:NA12877_ch_T0001328:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19676006	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001328;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001328;transcript_name=NA12877_ch_T0001328;gene_name=TTTY14;ID=exon:NA12877_ch_T0001328:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19676012	1000	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001329;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001329;gene_name=TTTY14;ID=NA12877_ch_T0001329;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001329;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001329;transcript_name=NA12877_ch_T0001329;gene_name=TTTY14;ID=exon:NA12877_ch_T0001329:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001329;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001329;transcript_name=NA12877_ch_T0001329;gene_name=TTTY14;ID=intron:NA12877_ch_T0001329:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001329;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001329;transcript_name=NA12877_ch_T0001329;gene_name=TTTY14;ID=exon:NA12877_ch_T0001329:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19673484	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001329;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001329;transcript_name=NA12877_ch_T0001329;gene_name=TTTY14;ID=intron:NA12877_ch_T0001329:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19673485	19673547	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001329;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001329;transcript_name=NA12877_ch_T0001329;gene_name=TTTY14;ID=exon:NA12877_ch_T0001329:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19673548	19675926	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001329;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001329;transcript_name=NA12877_ch_T0001329;gene_name=TTTY14;ID=intron:NA12877_ch_T0001329:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19676012	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001329;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001329;transcript_name=NA12877_ch_T0001329;gene_name=TTTY14;ID=exon:NA12877_ch_T0001329:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19677346	1000	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001330;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001330;gene_name=TTTY14;ID=NA12877_ch_T0001330;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001330;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001330;transcript_name=NA12877_ch_T0001330;gene_name=TTTY14;ID=exon:NA12877_ch_T0001330:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001330;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001330;transcript_name=NA12877_ch_T0001330;gene_name=TTTY14;ID=intron:NA12877_ch_T0001330:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001330;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001330;transcript_name=NA12877_ch_T0001330;gene_name=TTTY14;ID=exon:NA12877_ch_T0001330:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19668709	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001330;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001330;transcript_name=NA12877_ch_T0001330;gene_name=TTTY14;ID=intron:NA12877_ch_T0001330:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001330;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001330;transcript_name=NA12877_ch_T0001330;gene_name=TTTY14;ID=exon:NA12877_ch_T0001330:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19677253	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001330;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001330;transcript_name=NA12877_ch_T0001330;gene_name=TTTY14;ID=intron:NA12877_ch_T0001330:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677254	19677346	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001330;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001330;transcript_name=NA12877_ch_T0001330;gene_name=TTTY14;ID=exon:NA12877_ch_T0001330:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19655990	1000	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001331;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001331;gene_name=TTTY14;ID=NA12877_ch_T0001331;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001331;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001331;transcript_name=NA12877_ch_T0001331;gene_name=TTTY14;ID=exon:NA12877_ch_T0001331:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001331;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001331;transcript_name=NA12877_ch_T0001331;gene_name=TTTY14;ID=intron:NA12877_ch_T0001331:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001331;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001331;transcript_name=NA12877_ch_T0001331;gene_name=TTTY14;ID=exon:NA12877_ch_T0001331:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19527060	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001331;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001331;transcript_name=NA12877_ch_T0001331;gene_name=TTTY14;ID=intron:NA12877_ch_T0001331:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19527061	19527158	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001331;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001331;transcript_name=NA12877_ch_T0001331;gene_name=TTTY14;ID=exon:NA12877_ch_T0001331:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19527159	19532727	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001331;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001331;transcript_name=NA12877_ch_T0001331;gene_name=TTTY14;ID=intron:NA12877_ch_T0001331:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532728	19532826	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001331;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001331;transcript_name=NA12877_ch_T0001331;gene_name=TTTY14;ID=exon:NA12877_ch_T0001331:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19655860	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001331;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001331;transcript_name=NA12877_ch_T0001331;gene_name=TTTY14;ID=intron:NA12877_ch_T0001331:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19655861	19655990	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001331;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001331;transcript_name=NA12877_ch_T0001331;gene_name=TTTY14;ID=exon:NA12877_ch_T0001331:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19478211	1000	-	.	source_transcript=ENST00000324446.3;source_transcript_name=TTTY14-201;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000324446.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000324446.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001332;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001332;gene_name=TTTY14;ID=NA12877_ch_T0001332;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000324446.3;source_transcript_name=TTTY14-201;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000324446.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000324446.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001332;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001332;transcript_name=NA12877_ch_T0001332;gene_name=TTTY14;ID=exon:NA12877_ch_T0001332:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000324446.3;source_transcript_name=TTTY14-201;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000324446.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000324446.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001332;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001332;transcript_name=NA12877_ch_T0001332;gene_name=TTTY14;ID=intron:NA12877_ch_T0001332:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19478211	.	-	.	source_transcript=ENST00000324446.3;source_transcript_name=TTTY14-201;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000324446.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000324446.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001332;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001332;transcript_name=NA12877_ch_T0001332;gene_name=TTTY14;ID=exon:NA12877_ch_T0001332:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19656229	1000	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001333;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001333;gene_name=TTTY14;ID=NA12877_ch_T0001333;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001333;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001333;transcript_name=NA12877_ch_T0001333;gene_name=TTTY14;ID=exon:NA12877_ch_T0001333:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001333;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001333;transcript_name=NA12877_ch_T0001333;gene_name=TTTY14;ID=intron:NA12877_ch_T0001333:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001333;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001333;transcript_name=NA12877_ch_T0001333;gene_name=TTTY14;ID=exon:NA12877_ch_T0001333:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19655860	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001333;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001333;transcript_name=NA12877_ch_T0001333;gene_name=TTTY14;ID=intron:NA12877_ch_T0001333:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19655861	19656229	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001333;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001333;transcript_name=NA12877_ch_T0001333;gene_name=TTTY14;ID=exon:NA12877_ch_T0001333:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19656213	1000	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001334;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001334;gene_name=TTTY14;ID=NA12877_ch_T0001334;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001334;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001334;transcript_name=NA12877_ch_T0001334;gene_name=TTTY14;ID=exon:NA12877_ch_T0001334:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001334;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001334;transcript_name=NA12877_ch_T0001334;gene_name=TTTY14;ID=intron:NA12877_ch_T0001334:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001334;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001334;transcript_name=NA12877_ch_T0001334;gene_name=TTTY14;ID=exon:NA12877_ch_T0001334:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19656069	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001334;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001334;transcript_name=NA12877_ch_T0001334;gene_name=TTTY14;ID=intron:NA12877_ch_T0001334:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19656070	19656213	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001334;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001334;transcript_name=NA12877_ch_T0001334;gene_name=TTTY14;ID=exon:NA12877_ch_T0001334:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19656163	1000	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001335;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001335;gene_name=TTTY14;ID=NA12877_ch_T0001335;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001335;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001335;transcript_name=NA12877_ch_T0001335;gene_name=TTTY14;ID=exon:NA12877_ch_T0001335:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001335;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001335;transcript_name=NA12877_ch_T0001335;gene_name=TTTY14;ID=intron:NA12877_ch_T0001335:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001335;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001335;transcript_name=NA12877_ch_T0001335;gene_name=TTTY14;ID=exon:NA12877_ch_T0001335:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19655950	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001335;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001335;transcript_name=NA12877_ch_T0001335;gene_name=TTTY14;ID=intron:NA12877_ch_T0001335:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19655951	19656163	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001335;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001335;transcript_name=NA12877_ch_T0001335;gene_name=TTTY14;ID=exon:NA12877_ch_T0001335:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19676010	1000	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001336;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001336;gene_name=TTTY14;ID=NA12877_ch_T0001336;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001336;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001336;transcript_name=NA12877_ch_T0001336;gene_name=TTTY14;ID=exon:NA12877_ch_T0001336:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001336;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001336;transcript_name=NA12877_ch_T0001336;gene_name=TTTY14;ID=intron:NA12877_ch_T0001336:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001336;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001336;transcript_name=NA12877_ch_T0001336;gene_name=TTTY14;ID=exon:NA12877_ch_T0001336:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19675926	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001336;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001336;transcript_name=NA12877_ch_T0001336;gene_name=TTTY14;ID=intron:NA12877_ch_T0001336:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19676010	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001336;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001336;transcript_name=NA12877_ch_T0001336;gene_name=TTTY14;ID=exon:NA12877_ch_T0001336:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472484	19675997	1000	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001337;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001337;gene_name=TTTY14;ID=NA12877_ch_T0001337;Name=TTTY14
NA12877_chrY	CAT	exon	19472484	19472817	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001337;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001337;transcript_name=NA12877_ch_T0001337;gene_name=TTTY14;ID=exon:NA12877_ch_T0001337:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001337;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001337;transcript_name=NA12877_ch_T0001337;gene_name=TTTY14;ID=intron:NA12877_ch_T0001337:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001337;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001337;transcript_name=NA12877_ch_T0001337;gene_name=TTTY14;ID=exon:NA12877_ch_T0001337:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19532727	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001337;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001337;transcript_name=NA12877_ch_T0001337;gene_name=TTTY14;ID=intron:NA12877_ch_T0001337:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532728	19532826	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001337;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001337;transcript_name=NA12877_ch_T0001337;gene_name=TTTY14;ID=exon:NA12877_ch_T0001337:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19533341	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001337;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001337;transcript_name=NA12877_ch_T0001337;gene_name=TTTY14;ID=intron:NA12877_ch_T0001337:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19533342	19533460	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001337;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001337;transcript_name=NA12877_ch_T0001337;gene_name=TTTY14;ID=exon:NA12877_ch_T0001337:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19533461	19675926	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001337;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001337;transcript_name=NA12877_ch_T0001337;gene_name=TTTY14;ID=intron:NA12877_ch_T0001337:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19675997	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001337;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001337;transcript_name=NA12877_ch_T0001337;gene_name=TTTY14;ID=exon:NA12877_ch_T0001337:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472486	19675991	1000	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=NA12877_ch_T0001338;Name=TTTY14
NA12877_chrY	CAT	exon	19472486	19472817	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=exon:NA12877_ch_T0001338:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19477050	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=intron:NA12877_ch_T0001338:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477051	19477188	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=exon:NA12877_ch_T0001338:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19512353	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=intron:NA12877_ch_T0001338:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19512354	19512468	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=exon:NA12877_ch_T0001338:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19512469	19532727	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=intron:NA12877_ch_T0001338:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532728	19532826	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=exon:NA12877_ch_T0001338:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19533341	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=intron:NA12877_ch_T0001338:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19533342	19533460	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=exon:NA12877_ch_T0001338:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19533461	19641355	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=intron:NA12877_ch_T0001338:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19641356	19641572	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=exon:NA12877_ch_T0001338:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19641573	19668709	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=intron:NA12877_ch_T0001338:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=exon:NA12877_ch_T0001338:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19675926	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=intron:NA12877_ch_T0001338:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19675991	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001338;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001338;transcript_name=NA12877_ch_T0001338;gene_name=TTTY14;ID=exon:NA12877_ch_T0001338:7;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19472490	19675984	1000	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001339;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001339;gene_name=TTTY14;ID=NA12877_ch_T0001339;Name=TTTY14
NA12877_chrY	CAT	exon	19472490	19472817	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001339;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001339;transcript_name=NA12877_ch_T0001339;gene_name=TTTY14;ID=exon:NA12877_ch_T0001339:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19472818	19532727	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001339;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001339;transcript_name=NA12877_ch_T0001339;gene_name=TTTY14;ID=intron:NA12877_ch_T0001339:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532728	19532826	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001339;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001339;transcript_name=NA12877_ch_T0001339;gene_name=TTTY14;ID=exon:NA12877_ch_T0001339:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19668709	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001339;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001339;transcript_name=NA12877_ch_T0001339;gene_name=TTTY14;ID=intron:NA12877_ch_T0001339:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001339;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001339;transcript_name=NA12877_ch_T0001339;gene_name=TTTY14;ID=exon:NA12877_ch_T0001339:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19673484	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001339;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001339;transcript_name=NA12877_ch_T0001339;gene_name=TTTY14;ID=intron:NA12877_ch_T0001339:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19673485	19673547	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001339;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001339;transcript_name=NA12877_ch_T0001339;gene_name=TTTY14;ID=exon:NA12877_ch_T0001339:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19673548	19675926	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001339;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001339;transcript_name=NA12877_ch_T0001339;gene_name=TTTY14;ID=intron:NA12877_ch_T0001339:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19675984	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001339;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001339;transcript_name=NA12877_ch_T0001339;gene_name=TTTY14;ID=exon:NA12877_ch_T0001339:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19477123	19479397	1000	-	.	source_transcript=ENST00000658318.1;source_transcript_name=TTTY14-221;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658318.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658318.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001340;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001340;gene_name=TTTY14;ID=NA12877_ch_T0001340;Name=TTTY14
NA12877_chrY	CAT	exon	19477123	19477188	.	-	.	source_transcript=ENST00000658318.1;source_transcript_name=TTTY14-221;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658318.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001340;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001340;transcript_name=NA12877_ch_T0001340;gene_name=TTTY14;ID=exon:NA12877_ch_T0001340:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19477189	19477352	.	-	.	source_transcript=ENST00000658318.1;source_transcript_name=TTTY14-221;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658318.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001340;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001340;transcript_name=NA12877_ch_T0001340;gene_name=TTTY14;ID=intron:NA12877_ch_T0001340:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19477353	19479397	.	-	.	source_transcript=ENST00000658318.1;source_transcript_name=TTTY14-221;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658318.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001340;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001340;transcript_name=NA12877_ch_T0001340;gene_name=TTTY14;ID=exon:NA12877_ch_T0001340:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19526513	19677351	1000	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001341;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001341;gene_name=TTTY14;ID=NA12877_ch_T0001341;Name=TTTY14
NA12877_chrY	CAT	exon	19526513	19528358	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001341;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001341;transcript_name=NA12877_ch_T0001341;gene_name=TTTY14;ID=exon:NA12877_ch_T0001341:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19528359	19532727	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001341;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001341;transcript_name=NA12877_ch_T0001341;gene_name=TTTY14;ID=intron:NA12877_ch_T0001341:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532728	19532826	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001341;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001341;transcript_name=NA12877_ch_T0001341;gene_name=TTTY14;ID=exon:NA12877_ch_T0001341:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19677030	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001341;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001341;transcript_name=NA12877_ch_T0001341;gene_name=TTTY14;ID=intron:NA12877_ch_T0001341:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677351	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001341;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001341;transcript_name=NA12877_ch_T0001341;gene_name=TTTY14;ID=exon:NA12877_ch_T0001341:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19527991	19675995	1000	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001342;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001342;gene_name=TTTY14;ID=NA12877_ch_T0001342;Name=TTTY14
NA12877_chrY	CAT	exon	19527991	19528358	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001342;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001342;transcript_name=NA12877_ch_T0001342;gene_name=TTTY14;ID=exon:NA12877_ch_T0001342:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19528359	19532727	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001342;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001342;transcript_name=NA12877_ch_T0001342;gene_name=TTTY14;ID=intron:NA12877_ch_T0001342:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19532728	19532826	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001342;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001342;transcript_name=NA12877_ch_T0001342;gene_name=TTTY14;ID=exon:NA12877_ch_T0001342:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19675926	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001342;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001342;transcript_name=NA12877_ch_T0001342;gene_name=TTTY14;ID=intron:NA12877_ch_T0001342:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19675995	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001342;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001342;transcript_name=NA12877_ch_T0001342;gene_name=TTTY14;ID=exon:NA12877_ch_T0001342:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19528052	19675993	1000	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001343;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001343;gene_name=TTTY14;ID=NA12877_ch_T0001343;Name=TTTY14
NA12877_chrY	CAT	exon	19528052	19528358	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001343;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001343;transcript_name=NA12877_ch_T0001343;gene_name=TTTY14;ID=exon:NA12877_ch_T0001343:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19528359	19668709	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001343;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001343;transcript_name=NA12877_ch_T0001343;gene_name=TTTY14;ID=intron:NA12877_ch_T0001343:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001343;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001343;transcript_name=NA12877_ch_T0001343;gene_name=TTTY14;ID=exon:NA12877_ch_T0001343:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19675926	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001343;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001343;transcript_name=NA12877_ch_T0001343;gene_name=TTTY14;ID=intron:NA12877_ch_T0001343:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19675993	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001343;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001343;transcript_name=NA12877_ch_T0001343;gene_name=TTTY14;ID=exon:NA12877_ch_T0001343:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19530456	19677369	1000	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001344;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001344;gene_name=TTTY14;ID=NA12877_ch_T0001344;Name=TTTY14
NA12877_chrY	CAT	exon	19530456	19532826	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001344;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001344;transcript_name=NA12877_ch_T0001344;gene_name=TTTY14;ID=exon:NA12877_ch_T0001344:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19668709	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001344;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001344;transcript_name=NA12877_ch_T0001344;gene_name=TTTY14;ID=intron:NA12877_ch_T0001344:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001344;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001344;transcript_name=NA12877_ch_T0001344;gene_name=TTTY14;ID=exon:NA12877_ch_T0001344:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19673484	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001344;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001344;transcript_name=NA12877_ch_T0001344;gene_name=TTTY14;ID=intron:NA12877_ch_T0001344:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19673485	19673547	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001344;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001344;transcript_name=NA12877_ch_T0001344;gene_name=TTTY14;ID=exon:NA12877_ch_T0001344:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19673548	19677030	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001344;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001344;transcript_name=NA12877_ch_T0001344;gene_name=TTTY14;ID=intron:NA12877_ch_T0001344:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677369	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001344;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001344;transcript_name=NA12877_ch_T0001344;gene_name=TTTY14;ID=exon:NA12877_ch_T0001344:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19531992	19676106	1000	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001345;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001345;gene_name=TTTY14;ID=NA12877_ch_T0001345;Name=TTTY14
NA12877_chrY	CAT	exon	19531992	19532826	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001345;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001345;transcript_name=NA12877_ch_T0001345;gene_name=TTTY14;ID=exon:NA12877_ch_T0001345:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19668709	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001345;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001345;transcript_name=NA12877_ch_T0001345;gene_name=TTTY14;ID=intron:NA12877_ch_T0001345:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001345;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001345;transcript_name=NA12877_ch_T0001345;gene_name=TTTY14;ID=exon:NA12877_ch_T0001345:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19675926	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001345;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001345;transcript_name=NA12877_ch_T0001345;gene_name=TTTY14;ID=intron:NA12877_ch_T0001345:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19676106	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001345;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001345;transcript_name=NA12877_ch_T0001345;gene_name=TTTY14;ID=exon:NA12877_ch_T0001345:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532302	19675982	1000	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001346;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001346;gene_name=TTTY14;ID=NA12877_ch_T0001346;Name=TTTY14
NA12877_chrY	CAT	exon	19532302	19532826	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001346;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001346;transcript_name=NA12877_ch_T0001346;gene_name=TTTY14;ID=exon:NA12877_ch_T0001346:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19644527	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001346;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001346;transcript_name=NA12877_ch_T0001346;gene_name=TTTY14;ID=intron:NA12877_ch_T0001346:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19644528	19644681	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001346;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001346;transcript_name=NA12877_ch_T0001346;gene_name=TTTY14;ID=exon:NA12877_ch_T0001346:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19644682	19645227	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001346;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001346;transcript_name=NA12877_ch_T0001346;gene_name=TTTY14;ID=intron:NA12877_ch_T0001346:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19645228	19645277	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001346;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001346;transcript_name=NA12877_ch_T0001346;gene_name=TTTY14;ID=exon:NA12877_ch_T0001346:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19645278	19668709	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001346;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001346;transcript_name=NA12877_ch_T0001346;gene_name=TTTY14;ID=intron:NA12877_ch_T0001346:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001346;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001346;transcript_name=NA12877_ch_T0001346;gene_name=TTTY14;ID=exon:NA12877_ch_T0001346:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19675926	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001346;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001346;transcript_name=NA12877_ch_T0001346;gene_name=TTTY14;ID=intron:NA12877_ch_T0001346:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19675982	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001346;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001346;transcript_name=NA12877_ch_T0001346;gene_name=TTTY14;ID=exon:NA12877_ch_T0001346:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532421	19656018	1000	-	.	source_transcript=ENST00000850220.1;source_transcript_name=TTTY14-254;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850220.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001347;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001347;gene_name=TTTY14;ID=NA12877_ch_T0001347;Name=TTTY14
NA12877_chrY	CAT	exon	19532421	19532826	.	-	.	source_transcript=ENST00000850220.1;source_transcript_name=TTTY14-254;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001347;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001347;transcript_name=NA12877_ch_T0001347;gene_name=TTTY14;ID=exon:NA12877_ch_T0001347:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19655860	.	-	.	source_transcript=ENST00000850220.1;source_transcript_name=TTTY14-254;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001347;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001347;transcript_name=NA12877_ch_T0001347;gene_name=TTTY14;ID=intron:NA12877_ch_T0001347:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19655861	19656018	.	-	.	source_transcript=ENST00000850220.1;source_transcript_name=TTTY14-254;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001347;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001347;transcript_name=NA12877_ch_T0001347;gene_name=TTTY14;ID=exon:NA12877_ch_T0001347:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532421	19676002	1000	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001348;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001348;gene_name=TTTY14;ID=NA12877_ch_T0001348;Name=TTTY14
NA12877_chrY	CAT	exon	19532421	19532826	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001348;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001348;transcript_name=NA12877_ch_T0001348;gene_name=TTTY14;ID=exon:NA12877_ch_T0001348:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19533341	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001348;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001348;transcript_name=NA12877_ch_T0001348;gene_name=TTTY14;ID=intron:NA12877_ch_T0001348:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19533342	19533460	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001348;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001348;transcript_name=NA12877_ch_T0001348;gene_name=TTTY14;ID=exon:NA12877_ch_T0001348:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19533461	19675926	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001348;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001348;transcript_name=NA12877_ch_T0001348;gene_name=TTTY14;ID=intron:NA12877_ch_T0001348:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19676002	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001348;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001348;transcript_name=NA12877_ch_T0001348;gene_name=TTTY14;ID=exon:NA12877_ch_T0001348:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532421	19675997	1000	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001349;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001349;gene_name=TTTY14;ID=NA12877_ch_T0001349;Name=TTTY14
NA12877_chrY	CAT	exon	19532421	19532826	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001349;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001349;transcript_name=NA12877_ch_T0001349;gene_name=TTTY14;ID=exon:NA12877_ch_T0001349:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19668709	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001349;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001349;transcript_name=NA12877_ch_T0001349;gene_name=TTTY14;ID=intron:NA12877_ch_T0001349:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001349;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001349;transcript_name=NA12877_ch_T0001349;gene_name=TTTY14;ID=exon:NA12877_ch_T0001349:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19673484	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001349;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001349;transcript_name=NA12877_ch_T0001349;gene_name=TTTY14;ID=intron:NA12877_ch_T0001349:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19673485	19673547	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001349;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001349;transcript_name=NA12877_ch_T0001349;gene_name=TTTY14;ID=exon:NA12877_ch_T0001349:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19673548	19675926	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001349;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001349;transcript_name=NA12877_ch_T0001349;gene_name=TTTY14;ID=intron:NA12877_ch_T0001349:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19675997	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001349;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001349;transcript_name=NA12877_ch_T0001349;gene_name=TTTY14;ID=exon:NA12877_ch_T0001349:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532421	19677541	1000	-	.	source_transcript=ENST00000850212.1;source_transcript_name=TTTY14-246;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850212.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001350;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001350;gene_name=TTTY14;ID=NA12877_ch_T0001350;Name=TTTY14
NA12877_chrY	CAT	exon	19532421	19532826	.	-	.	source_transcript=ENST00000850212.1;source_transcript_name=TTTY14-246;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850212.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001350;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001350;transcript_name=NA12877_ch_T0001350;gene_name=TTTY14;ID=exon:NA12877_ch_T0001350:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19677253	.	-	.	source_transcript=ENST00000850212.1;source_transcript_name=TTTY14-246;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850212.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001350;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001350;transcript_name=NA12877_ch_T0001350;gene_name=TTTY14;ID=intron:NA12877_ch_T0001350:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677254	19677541	.	-	.	source_transcript=ENST00000850212.1;source_transcript_name=TTTY14-246;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850212.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001350;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001350;transcript_name=NA12877_ch_T0001350;gene_name=TTTY14;ID=exon:NA12877_ch_T0001350:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532421	19677423	1000	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001351;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001351;gene_name=TTTY14;ID=NA12877_ch_T0001351;Name=TTTY14
NA12877_chrY	CAT	exon	19532421	19532826	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001351;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001351;transcript_name=NA12877_ch_T0001351;gene_name=TTTY14;ID=exon:NA12877_ch_T0001351:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19668709	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001351;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001351;transcript_name=NA12877_ch_T0001351;gene_name=TTTY14;ID=intron:NA12877_ch_T0001351:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001351;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001351;transcript_name=NA12877_ch_T0001351;gene_name=TTTY14;ID=exon:NA12877_ch_T0001351:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19677253	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001351;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001351;transcript_name=NA12877_ch_T0001351;gene_name=TTTY14;ID=intron:NA12877_ch_T0001351:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677254	19677423	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001351;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001351;transcript_name=NA12877_ch_T0001351;gene_name=TTTY14;ID=exon:NA12877_ch_T0001351:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532421	19675993	1000	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001352;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001352;gene_name=TTTY14;ID=NA12877_ch_T0001352;Name=TTTY14
NA12877_chrY	CAT	exon	19532421	19532826	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001352;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001352;transcript_name=NA12877_ch_T0001352;gene_name=TTTY14;ID=exon:NA12877_ch_T0001352:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19533341	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001352;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001352;transcript_name=NA12877_ch_T0001352;gene_name=TTTY14;ID=intron:NA12877_ch_T0001352:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19533342	19533460	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001352;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001352;transcript_name=NA12877_ch_T0001352;gene_name=TTTY14;ID=exon:NA12877_ch_T0001352:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19533461	19668709	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001352;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001352;transcript_name=NA12877_ch_T0001352;gene_name=TTTY14;ID=intron:NA12877_ch_T0001352:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001352;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001352;transcript_name=NA12877_ch_T0001352;gene_name=TTTY14;ID=exon:NA12877_ch_T0001352:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19675926	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001352;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001352;transcript_name=NA12877_ch_T0001352;gene_name=TTTY14;ID=intron:NA12877_ch_T0001352:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19675993	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001352;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001352;transcript_name=NA12877_ch_T0001352;gene_name=TTTY14;ID=exon:NA12877_ch_T0001352:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532679	19656221	1000	-	.	source_transcript=ENST00000850221.1;source_transcript_name=TTTY14-255;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850221.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001353;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001353;gene_name=TTTY14;ID=NA12877_ch_T0001353;Name=TTTY14
NA12877_chrY	CAT	exon	19532679	19532826	.	-	.	source_transcript=ENST00000850221.1;source_transcript_name=TTTY14-255;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001353;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001353;transcript_name=NA12877_ch_T0001353;gene_name=TTTY14;ID=exon:NA12877_ch_T0001353:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19655950	.	-	.	source_transcript=ENST00000850221.1;source_transcript_name=TTTY14-255;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001353;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001353;transcript_name=NA12877_ch_T0001353;gene_name=TTTY14;ID=intron:NA12877_ch_T0001353:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19655951	19656221	.	-	.	source_transcript=ENST00000850221.1;source_transcript_name=TTTY14-255;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001353;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001353;transcript_name=NA12877_ch_T0001353;gene_name=TTTY14;ID=exon:NA12877_ch_T0001353:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532681	19677114	1000	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001354;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001354;gene_name=TTTY14;ID=NA12877_ch_T0001354;Name=TTTY14
NA12877_chrY	CAT	exon	19532681	19532826	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001354;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001354;transcript_name=NA12877_ch_T0001354;gene_name=TTTY14;ID=exon:NA12877_ch_T0001354:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19668709	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001354;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001354;transcript_name=NA12877_ch_T0001354;gene_name=TTTY14;ID=intron:NA12877_ch_T0001354:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001354;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001354;transcript_name=NA12877_ch_T0001354;gene_name=TTTY14;ID=exon:NA12877_ch_T0001354:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19677030	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001354;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001354;transcript_name=NA12877_ch_T0001354;gene_name=TTTY14;ID=intron:NA12877_ch_T0001354:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677114	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001354;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001354;transcript_name=NA12877_ch_T0001354;gene_name=TTTY14;ID=exon:NA12877_ch_T0001354:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532681	19677402	1000	-	.	source_transcript=ENST00000331787.3;source_transcript_name=TTTY14-202;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000331787.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000331787.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001355;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001355;gene_name=TTTY14;ID=NA12877_ch_T0001355;Name=TTTY14
NA12877_chrY	CAT	exon	19532681	19532826	.	-	.	source_transcript=ENST00000331787.3;source_transcript_name=TTTY14-202;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000331787.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000331787.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001355;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001355;transcript_name=NA12877_ch_T0001355;gene_name=TTTY14;ID=exon:NA12877_ch_T0001355:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19677030	.	-	.	source_transcript=ENST00000331787.3;source_transcript_name=TTTY14-202;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000331787.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000331787.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001355;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001355;transcript_name=NA12877_ch_T0001355;gene_name=TTTY14;ID=intron:NA12877_ch_T0001355:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677402	.	-	.	source_transcript=ENST00000331787.3;source_transcript_name=TTTY14-202;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000331787.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000331787.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001355;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001355;transcript_name=NA12877_ch_T0001355;gene_name=TTTY14;ID=exon:NA12877_ch_T0001355:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532684	19675991	1000	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001356;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001356;gene_name=TTTY14;ID=NA12877_ch_T0001356;Name=TTTY14
NA12877_chrY	CAT	exon	19532684	19532826	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001356;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001356;transcript_name=NA12877_ch_T0001356;gene_name=TTTY14;ID=exon:NA12877_ch_T0001356:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19582708	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001356;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001356;transcript_name=NA12877_ch_T0001356;gene_name=TTTY14;ID=intron:NA12877_ch_T0001356:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19582709	19582832	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001356;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001356;transcript_name=NA12877_ch_T0001356;gene_name=TTTY14;ID=exon:NA12877_ch_T0001356:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19582833	19668709	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001356;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001356;transcript_name=NA12877_ch_T0001356;gene_name=TTTY14;ID=intron:NA12877_ch_T0001356:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001356;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001356;transcript_name=NA12877_ch_T0001356;gene_name=TTTY14;ID=exon:NA12877_ch_T0001356:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19675926	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001356;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001356;transcript_name=NA12877_ch_T0001356;gene_name=TTTY14;ID=intron:NA12877_ch_T0001356:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19675991	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001356;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001356;transcript_name=NA12877_ch_T0001356;gene_name=TTTY14;ID=exon:NA12877_ch_T0001356:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532684	19655968	1000	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001357;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001357;gene_name=TTTY14;ID=NA12877_ch_T0001357;Name=TTTY14
NA12877_chrY	CAT	exon	19532684	19532826	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001357;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001357;transcript_name=NA12877_ch_T0001357;gene_name=TTTY14;ID=exon:NA12877_ch_T0001357:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19533341	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001357;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001357;transcript_name=NA12877_ch_T0001357;gene_name=TTTY14;ID=intron:NA12877_ch_T0001357:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19533342	19533460	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001357;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001357;transcript_name=NA12877_ch_T0001357;gene_name=TTTY14;ID=exon:NA12877_ch_T0001357:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19533461	19655860	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001357;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001357;transcript_name=NA12877_ch_T0001357;gene_name=TTTY14;ID=intron:NA12877_ch_T0001357:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19655861	19655968	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001357;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001357;transcript_name=NA12877_ch_T0001357;gene_name=TTTY14;ID=exon:NA12877_ch_T0001357:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532684	19677093	1000	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001358;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001358;gene_name=TTTY14;ID=NA12877_ch_T0001358;Name=TTTY14
NA12877_chrY	CAT	exon	19532684	19532826	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001358;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001358;transcript_name=NA12877_ch_T0001358;gene_name=TTTY14;ID=exon:NA12877_ch_T0001358:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19542419	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001358;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001358;transcript_name=NA12877_ch_T0001358;gene_name=TTTY14;ID=intron:NA12877_ch_T0001358:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19542420	19542532	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001358;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001358;transcript_name=NA12877_ch_T0001358;gene_name=TTTY14;ID=exon:NA12877_ch_T0001358:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19542533	19677030	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001358;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001358;transcript_name=NA12877_ch_T0001358;gene_name=TTTY14;ID=intron:NA12877_ch_T0001358:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677093	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001358;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001358;transcript_name=NA12877_ch_T0001358;gene_name=TTTY14;ID=exon:NA12877_ch_T0001358:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532684	19675994	1000	-	.	source_transcript=ENST00000850217.1;source_transcript_name=TTTY14-251;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001359;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001359;gene_name=TTTY14;ID=NA12877_ch_T0001359;Name=TTTY14
NA12877_chrY	CAT	exon	19532684	19532826	.	-	.	source_transcript=ENST00000850217.1;source_transcript_name=TTTY14-251;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001359;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001359;transcript_name=NA12877_ch_T0001359;gene_name=TTTY14;ID=exon:NA12877_ch_T0001359:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19675926	.	-	.	source_transcript=ENST00000850217.1;source_transcript_name=TTTY14-251;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001359;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001359;transcript_name=NA12877_ch_T0001359;gene_name=TTTY14;ID=intron:NA12877_ch_T0001359:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19675994	.	-	.	source_transcript=ENST00000850217.1;source_transcript_name=TTTY14-251;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001359;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001359;transcript_name=NA12877_ch_T0001359;gene_name=TTTY14;ID=exon:NA12877_ch_T0001359:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19532684	19675991	1000	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001360;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001360;gene_name=TTTY14;ID=NA12877_ch_T0001360;Name=TTTY14
NA12877_chrY	CAT	exon	19532684	19532826	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001360;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001360;transcript_name=NA12877_ch_T0001360;gene_name=TTTY14;ID=exon:NA12877_ch_T0001360:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19532827	19641355	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001360;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001360;transcript_name=NA12877_ch_T0001360;gene_name=TTTY14;ID=intron:NA12877_ch_T0001360:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19641356	19641572	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001360;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001360;transcript_name=NA12877_ch_T0001360;gene_name=TTTY14;ID=exon:NA12877_ch_T0001360:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19641573	19643148	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001360;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001360;transcript_name=NA12877_ch_T0001360;gene_name=TTTY14;ID=intron:NA12877_ch_T0001360:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19643149	19643332	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001360;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001360;transcript_name=NA12877_ch_T0001360;gene_name=TTTY14;ID=exon:NA12877_ch_T0001360:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19643333	19644527	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001360;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001360;transcript_name=NA12877_ch_T0001360;gene_name=TTTY14;ID=intron:NA12877_ch_T0001360:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19644528	19644681	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001360;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001360;transcript_name=NA12877_ch_T0001360;gene_name=TTTY14;ID=exon:NA12877_ch_T0001360:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19644682	19668709	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001360;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001360;transcript_name=NA12877_ch_T0001360;gene_name=TTTY14;ID=intron:NA12877_ch_T0001360:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001360;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001360;transcript_name=NA12877_ch_T0001360;gene_name=TTTY14;ID=exon:NA12877_ch_T0001360:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19675926	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001360;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001360;transcript_name=NA12877_ch_T0001360;gene_name=TTTY14;ID=intron:NA12877_ch_T0001360:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19675927	19675991	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001360;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001360;transcript_name=NA12877_ch_T0001360;gene_name=TTTY14;ID=exon:NA12877_ch_T0001360:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19640226	19644652	1000	-	.	source_transcript=ENST00000667450.1;source_transcript_name=TTTY14-227;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667450.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667450.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001364;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001364;gene_name=TTTY14;ID=NA12877_ch_T0001364;Name=TTTY14
NA12877_chrY	CAT	exon	19640226	19643332	.	-	.	source_transcript=ENST00000667450.1;source_transcript_name=TTTY14-227;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667450.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667450.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001364;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001364;transcript_name=NA12877_ch_T0001364;gene_name=TTTY14;ID=exon:NA12877_ch_T0001364:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19643333	19644527	.	-	.	source_transcript=ENST00000667450.1;source_transcript_name=TTTY14-227;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667450.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667450.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001364;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001364;transcript_name=NA12877_ch_T0001364;gene_name=TTTY14;ID=intron:NA12877_ch_T0001364:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19644528	19644652	.	-	.	source_transcript=ENST00000667450.1;source_transcript_name=TTTY14-227;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667450.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667450.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001364;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001364;transcript_name=NA12877_ch_T0001364;gene_name=TTTY14;ID=exon:NA12877_ch_T0001364:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19641484	19677381	1000	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=NA12877_ch_T0001365;Name=TTTY14
NA12877_chrY	CAT	exon	19641484	19641572	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=exon:NA12877_ch_T0001365:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19641573	19643148	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=intron:NA12877_ch_T0001365:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19643149	19643332	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=exon:NA12877_ch_T0001365:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19643333	19644647	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=intron:NA12877_ch_T0001365:1;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19644648	19644681	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=exon:NA12877_ch_T0001365:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19644682	19645227	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=intron:NA12877_ch_T0001365:2;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19645228	19645274	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=exon:NA12877_ch_T0001365:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19645275	19648758	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=intron:NA12877_ch_T0001365:3;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19648759	19648898	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=exon:NA12877_ch_T0001365:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19648899	19668709	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=intron:NA12877_ch_T0001365:4;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19668710	19668784	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=exon:NA12877_ch_T0001365:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19668785	19677030	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=intron:NA12877_ch_T0001365:5;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19677031	19677381	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001365;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001365;transcript_name=NA12877_ch_T0001365;gene_name=TTTY14;ID=exon:NA12877_ch_T0001365:6;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19676932	19677402	1000	-	.	source_transcript=ENST00000610801.1;source_transcript_name=TTTY14-207;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000610801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610801.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001368;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_G0000454;transcript_name=NA12877_ch_T0001368;gene_name=TTTY14;ID=NA12877_ch_T0001368;Name=TTTY14
NA12877_chrY	CAT	exon	19676932	19677402	.	-	.	source_transcript=ENST00000610801.1;source_transcript_name=TTTY14-207;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000610801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=NA12877_ch_T0001368;gene_id=NA12877_ch_G0000454;Parent=NA12877_ch_T0001368;transcript_name=NA12877_ch_T0001368;gene_name=TTTY14;ID=exon:NA12877_ch_T0001368:0;Name=TTTY14;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19376252	19379400	.	-	.	source_gene_common_name=USP9YP2;source_gene=ENSG00000249501.1;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;gene_id=NA12877_ch_G0000455;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP2;gene_sources=liftoff;ID=NA12877_ch_G0000455;Name=USP9YP2
NA12877_chrY	CAT	transcript	19376252	19379400	1000	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=NA12877_ch_T0001305;gene_id=NA12877_ch_G0000455;Parent=NA12877_ch_G0000455;transcript_name=NA12877_ch_T0001305;gene_name=USP9YP2;ID=NA12877_ch_T0001305;Name=USP9YP2
NA12877_chrY	CAT	exon	19376252	19376376	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=NA12877_ch_T0001305;gene_id=NA12877_ch_G0000455;Parent=NA12877_ch_T0001305;transcript_name=NA12877_ch_T0001305;gene_name=USP9YP2;ID=exon:NA12877_ch_T0001305:0;Name=USP9YP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19376377	19376788	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=NA12877_ch_T0001305;gene_id=NA12877_ch_G0000455;Parent=NA12877_ch_T0001305;transcript_name=NA12877_ch_T0001305;gene_name=USP9YP2;ID=intron:NA12877_ch_T0001305:0;Name=USP9YP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19376789	19377534	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=NA12877_ch_T0001305;gene_id=NA12877_ch_G0000455;Parent=NA12877_ch_T0001305;transcript_name=NA12877_ch_T0001305;gene_name=USP9YP2;ID=exon:NA12877_ch_T0001305:1;Name=USP9YP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19377535	19379271	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=NA12877_ch_T0001305;gene_id=NA12877_ch_G0000455;Parent=NA12877_ch_T0001305;transcript_name=NA12877_ch_T0001305;gene_name=USP9YP2;ID=intron:NA12877_ch_T0001305:1;Name=USP9YP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19379272	19379400	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=NA12877_ch_T0001305;gene_id=NA12877_ch_G0000455;Parent=NA12877_ch_T0001305;transcript_name=NA12877_ch_T0001305;gene_name=USP9YP2;ID=exon:NA12877_ch_T0001305:2;Name=USP9YP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19387723	19388053	.	+	.	source_gene_common_name=ELOCP14;source_gene=ENSG00000228193.1;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;gene_id=NA12877_ch_G0000456;gene_biotype=processed_pseudogene;gene_name=ELOCP14;gene_sources=liftoff;ID=NA12877_ch_G0000456;Name=ELOCP14
NA12877_chrY	CAT	transcript	19387723	19388053	1000	+	.	source_transcript=ENST00000428070.1;source_transcript_name=ELOCP14-201;source_gene=ENSG00000228193.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228193.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428070.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428070.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP14;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;transcript_id=NA12877_ch_T0001306;gene_id=NA12877_ch_G0000456;Parent=NA12877_ch_G0000456;transcript_name=NA12877_ch_T0001306;gene_name=ELOCP14;ID=NA12877_ch_T0001306;Name=ELOCP14
NA12877_chrY	CAT	exon	19387723	19388053	.	+	.	source_transcript=ENST00000428070.1;source_transcript_name=ELOCP14-201;source_gene=ENSG00000228193.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228193.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428070.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428070.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP14;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;transcript_id=NA12877_ch_T0001306;gene_id=NA12877_ch_G0000456;Parent=NA12877_ch_T0001306;transcript_name=NA12877_ch_T0001306;gene_name=ELOCP14;ID=exon:NA12877_ch_T0001306:0;Name=ELOCP14;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19411311	19411802	.	-	.	source_gene_common_name=XKRYP2;source_gene=ENSG00000230904.1;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;gene_id=NA12877_ch_G0000457;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP2;gene_sources=liftoff;ID=NA12877_ch_G0000457;Name=XKRYP2
NA12877_chrY	CAT	transcript	19411311	19411802	1000	-	.	source_transcript=ENST00000432915.1;source_transcript_name=XKRYP2-201;source_gene=ENSG00000230904.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230904.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432915.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432915.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP2;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;transcript_id=NA12877_ch_T0001312;gene_id=NA12877_ch_G0000457;Parent=NA12877_ch_G0000457;transcript_name=NA12877_ch_T0001312;gene_name=XKRYP2;ID=NA12877_ch_T0001312;Name=XKRYP2
NA12877_chrY	CAT	exon	19411311	19411802	.	-	.	source_transcript=ENST00000432915.1;source_transcript_name=XKRYP2-201;source_gene=ENSG00000230904.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230904.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432915.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432915.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP2;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;transcript_id=NA12877_ch_T0001312;gene_id=NA12877_ch_G0000457;Parent=NA12877_ch_T0001312;transcript_name=NA12877_ch_T0001312;gene_name=XKRYP2;ID=exon:NA12877_ch_T0001312:0;Name=XKRYP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19426084	19429464	.	+	.	source_gene_common_name=USP9YP10;source_gene=ENSG00000238135.1;alternative_source_transcripts=ENST00000454868.1;gene_id=NA12877_ch_G0000458;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP10;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000458;Name=USP9YP10
NA12877_chrY	CAT	transcript	19426084	19429464	1000	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;alternative_source_transcripts=ENST00000454868.1;transcript_id=NA12877_ch_T0001313;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_G0000458;transcript_name=NA12877_ch_T0001313;gene_name=USP9YP10;ID=NA12877_ch_T0001313;Name=USP9YP10
NA12877_chrY	CAT	exon	19426084	19426304	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;alternative_source_transcripts=ENST00000454868.1;transcript_id=NA12877_ch_T0001313;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_T0001313;transcript_name=NA12877_ch_T0001313;gene_name=USP9YP10;ID=exon:NA12877_ch_T0001313:0;Name=USP9YP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19426305	19427073	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;alternative_source_transcripts=ENST00000454868.1;transcript_id=NA12877_ch_T0001313;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_T0001313;transcript_name=NA12877_ch_T0001313;gene_name=USP9YP10;ID=intron:NA12877_ch_T0001313:0;Name=USP9YP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19427074	19427369	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;alternative_source_transcripts=ENST00000454868.1;transcript_id=NA12877_ch_T0001313;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_T0001313;transcript_name=NA12877_ch_T0001313;gene_name=USP9YP10;ID=exon:NA12877_ch_T0001313:1;Name=USP9YP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19427370	19429275	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;alternative_source_transcripts=ENST00000454868.1;transcript_id=NA12877_ch_T0001313;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_T0001313;transcript_name=NA12877_ch_T0001313;gene_name=USP9YP10;ID=intron:NA12877_ch_T0001313:1;Name=USP9YP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19429276	19429464	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;alternative_source_transcripts=ENST00000454868.1;transcript_id=NA12877_ch_T0001313;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_T0001313;transcript_name=NA12877_ch_T0001313;gene_name=USP9YP10;ID=exon:NA12877_ch_T0001313:2;Name=USP9YP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19426084	19429464	1000	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=NA12877_ch_T0001314;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_G0000458;transcript_name=NA12877_ch_T0001314;gene_name=USP9YP10;ID=NA12877_ch_T0001314;Name=USP9YP10
NA12877_chrY	CAT	exon	19426084	19426304	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=NA12877_ch_T0001314;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_T0001314;transcript_name=NA12877_ch_T0001314;gene_name=USP9YP10;ID=exon:NA12877_ch_T0001314:0;Name=USP9YP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19426305	19427073	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=NA12877_ch_T0001314;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_T0001314;transcript_name=NA12877_ch_T0001314;gene_name=USP9YP10;ID=intron:NA12877_ch_T0001314:0;Name=USP9YP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19427074	19427197	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=NA12877_ch_T0001314;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_T0001314;transcript_name=NA12877_ch_T0001314;gene_name=USP9YP10;ID=exon:NA12877_ch_T0001314:1;Name=USP9YP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19427198	19427275	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=NA12877_ch_T0001314;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_T0001314;transcript_name=NA12877_ch_T0001314;gene_name=USP9YP10;ID=intron:NA12877_ch_T0001314:1;Name=USP9YP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19427276	19427369	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=NA12877_ch_T0001314;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_T0001314;transcript_name=NA12877_ch_T0001314;gene_name=USP9YP10;ID=exon:NA12877_ch_T0001314:2;Name=USP9YP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19427370	19429275	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=NA12877_ch_T0001314;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_T0001314;transcript_name=NA12877_ch_T0001314;gene_name=USP9YP10;ID=intron:NA12877_ch_T0001314:2;Name=USP9YP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19429276	19429464	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=NA12877_ch_T0001314;gene_id=NA12877_ch_G0000458;Parent=NA12877_ch_T0001314;transcript_name=NA12877_ch_T0001314;gene_name=USP9YP10;ID=exon:NA12877_ch_T0001314:3;Name=USP9YP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19432979	19439291	.	-	.	source_gene_common_name=USP9YP28;source_gene=ENSG00000224151.1;gene_id=NA12877_ch_G0000459;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=USP9YP28;gene_sources=liftoff;ID=NA12877_ch_G0000459;Name=USP9YP28
NA12877_chrY	CAT	transcript	19432979	19439291	1000	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=NA12877_ch_T0001315;gene_id=NA12877_ch_G0000459;Parent=NA12877_ch_G0000459;transcript_name=NA12877_ch_T0001315;gene_name=USP9YP28;ID=NA12877_ch_T0001315;Name=USP9YP28
NA12877_chrY	CAT	exon	19432979	19433074	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=NA12877_ch_T0001315;gene_id=NA12877_ch_G0000459;Parent=NA12877_ch_T0001315;transcript_name=NA12877_ch_T0001315;gene_name=USP9YP28;ID=exon:NA12877_ch_T0001315:0;Name=USP9YP28;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19433075	19433451	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=NA12877_ch_T0001315;gene_id=NA12877_ch_G0000459;Parent=NA12877_ch_T0001315;transcript_name=NA12877_ch_T0001315;gene_name=USP9YP28;ID=intron:NA12877_ch_T0001315:0;Name=USP9YP28;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19433452	19433626	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=NA12877_ch_T0001315;gene_id=NA12877_ch_G0000459;Parent=NA12877_ch_T0001315;transcript_name=NA12877_ch_T0001315;gene_name=USP9YP28;ID=exon:NA12877_ch_T0001315:1;Name=USP9YP28;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19433627	19433867	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=NA12877_ch_T0001315;gene_id=NA12877_ch_G0000459;Parent=NA12877_ch_T0001315;transcript_name=NA12877_ch_T0001315;gene_name=USP9YP28;ID=intron:NA12877_ch_T0001315:1;Name=USP9YP28;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19433868	19433896	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=NA12877_ch_T0001315;gene_id=NA12877_ch_G0000459;Parent=NA12877_ch_T0001315;transcript_name=NA12877_ch_T0001315;gene_name=USP9YP28;ID=exon:NA12877_ch_T0001315:2;Name=USP9YP28;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19433897	19434028	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=NA12877_ch_T0001315;gene_id=NA12877_ch_G0000459;Parent=NA12877_ch_T0001315;transcript_name=NA12877_ch_T0001315;gene_name=USP9YP28;ID=intron:NA12877_ch_T0001315:2;Name=USP9YP28;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19434029	19434185	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=NA12877_ch_T0001315;gene_id=NA12877_ch_G0000459;Parent=NA12877_ch_T0001315;transcript_name=NA12877_ch_T0001315;gene_name=USP9YP28;ID=exon:NA12877_ch_T0001315:3;Name=USP9YP28;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19434186	19439159	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=NA12877_ch_T0001315;gene_id=NA12877_ch_G0000459;Parent=NA12877_ch_T0001315;transcript_name=NA12877_ch_T0001315;gene_name=USP9YP28;ID=intron:NA12877_ch_T0001315:3;Name=USP9YP28;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19439160	19439291	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=NA12877_ch_T0001315;gene_id=NA12877_ch_G0000459;Parent=NA12877_ch_T0001315;transcript_name=NA12877_ch_T0001315;gene_name=USP9YP28;ID=exon:NA12877_ch_T0001315:4;Name=USP9YP28;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19433707	19433868	.	-	.	source_gene_common_name=RNU1-41P;source_gene=ENSG00000251970.1;gene_id=NA12877_ch_G0000460;gene_biotype=snRNA;gene_name=RNU1-41P;gene_sources=liftoff;ID=NA12877_ch_G0000460;Name=RNU1-41P
NA12877_chrY	CAT	transcript	19433707	19433868	1000	-	.	source_transcript=ENST00000516161.1;source_transcript_name=RNU1-41P-201;source_gene=ENSG00000251970.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251970.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516161.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-41P;transcript_id=NA12877_ch_T0001316;gene_id=NA12877_ch_G0000460;Parent=NA12877_ch_G0000460;transcript_name=NA12877_ch_T0001316;gene_name=RNU1-41P;ID=NA12877_ch_T0001316;Name=RNU1-41P
NA12877_chrY	CAT	exon	19433707	19433868	.	-	.	source_transcript=ENST00000516161.1;source_transcript_name=RNU1-41P-201;source_gene=ENSG00000251970.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251970.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-41P;transcript_id=NA12877_ch_T0001316;gene_id=NA12877_ch_G0000460;Parent=NA12877_ch_T0001316;transcript_name=NA12877_ch_T0001316;gene_name=RNU1-41P;ID=exon:NA12877_ch_T0001316:0;Name=RNU1-41P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19448245	19467263	.	+	.	source_gene_common_name=OFD1P7Y;source_gene=ENSG00000238088.1;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;gene_id=NA12877_ch_G0000461;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P7Y;gene_sources=liftoff;ID=NA12877_ch_G0000461;Name=OFD1P7Y
NA12877_chrY	CAT	transcript	19448245	19467263	1000	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_G0000461;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=NA12877_ch_T0001318;Name=OFD1P7Y
NA12877_chrY	CAT	exon	19448245	19448316	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=exon:NA12877_ch_T0001318:0;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19448317	19449509	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=intron:NA12877_ch_T0001318:0;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19449510	19449710	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=exon:NA12877_ch_T0001318:1;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19449711	19451931	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=intron:NA12877_ch_T0001318:1;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19451932	19451996	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=exon:NA12877_ch_T0001318:2;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19451997	19452083	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=intron:NA12877_ch_T0001318:2;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19452084	19452113	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=exon:NA12877_ch_T0001318:3;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19452114	19456331	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=intron:NA12877_ch_T0001318:3;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19456332	19456468	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=exon:NA12877_ch_T0001318:4;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19456469	19456816	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=intron:NA12877_ch_T0001318:4;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19456817	19456932	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=exon:NA12877_ch_T0001318:5;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19456933	19460042	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=intron:NA12877_ch_T0001318:5;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19460043	19460149	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=exon:NA12877_ch_T0001318:6;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19460150	19462317	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=intron:NA12877_ch_T0001318:6;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19462318	19462435	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=exon:NA12877_ch_T0001318:7;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19462436	19464216	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=intron:NA12877_ch_T0001318:7;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19464217	19464284	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=exon:NA12877_ch_T0001318:8;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19464285	19465396	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=intron:NA12877_ch_T0001318:8;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19465397	19465496	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=exon:NA12877_ch_T0001318:9;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19465497	19467122	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=intron:NA12877_ch_T0001318:9;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19467123	19467263	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=NA12877_ch_T0001318;gene_id=NA12877_ch_G0000461;Parent=NA12877_ch_T0001318;transcript_name=NA12877_ch_T0001318;gene_name=OFD1P7Y;ID=exon:NA12877_ch_T0001318:10;Name=OFD1P7Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19472085	19472255	.	+	.	source_gene_common_name=MTCYBP2;source_gene=ENSG00000217179.1;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;gene_id=NA12877_ch_G0000462;gene_biotype=processed_pseudogene;gene_name=MTCYBP2;gene_sources=liftoff;ID=NA12877_ch_G0000462;Name=MTCYBP2
NA12877_chrY	CAT	transcript	19472085	19472255	1000	+	.	source_transcript=ENST00000407745.1;source_transcript_name=MTCYBP2-201;source_gene=ENSG00000217179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000407745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000407745.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP2;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;transcript_id=NA12877_ch_T0001319;gene_id=NA12877_ch_G0000462;Parent=NA12877_ch_G0000462;transcript_name=NA12877_ch_T0001319;gene_name=MTCYBP2;ID=NA12877_ch_T0001319;Name=MTCYBP2
NA12877_chrY	CAT	exon	19472085	19472255	.	+	.	source_transcript=ENST00000407745.1;source_transcript_name=MTCYBP2-201;source_gene=ENSG00000217179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000407745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000407745.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP2;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;transcript_id=NA12877_ch_T0001319;gene_id=NA12877_ch_G0000462;Parent=NA12877_ch_T0001319;transcript_name=NA12877_ch_T0001319;gene_name=MTCYBP2;ID=exon:NA12877_ch_T0001319:0;Name=MTCYBP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19585160	19586383	.	+	.	source_gene_common_name=ZNF839P1;source_gene=ENSG00000217896.2;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;gene_id=NA12877_ch_G0000463;gene_biotype=processed_pseudogene;gene_name=ZNF839P1;gene_sources=liftoff;ID=NA12877_ch_G0000463;Name=ZNF839P1
NA12877_chrY	CAT	transcript	19585160	19586383	1000	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=NA12877_ch_T0001361;gene_id=NA12877_ch_G0000463;Parent=NA12877_ch_G0000463;transcript_name=NA12877_ch_T0001361;gene_name=ZNF839P1;ID=NA12877_ch_T0001361;Name=ZNF839P1
NA12877_chrY	CAT	exon	19585160	19585839	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=NA12877_ch_T0001361;gene_id=NA12877_ch_G0000463;Parent=NA12877_ch_T0001361;transcript_name=NA12877_ch_T0001361;gene_name=ZNF839P1;ID=exon:NA12877_ch_T0001361:0;Name=ZNF839P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19585840	19586202	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=NA12877_ch_T0001361;gene_id=NA12877_ch_G0000463;Parent=NA12877_ch_T0001361;transcript_name=NA12877_ch_T0001361;gene_name=ZNF839P1;ID=intron:NA12877_ch_T0001361:0;Name=ZNF839P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19586203	19586383	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=NA12877_ch_T0001361;gene_id=NA12877_ch_G0000463;Parent=NA12877_ch_T0001361;transcript_name=NA12877_ch_T0001361;gene_name=ZNF839P1;ID=exon:NA12877_ch_T0001361:1;Name=ZNF839P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19592452	19592694	.	-	.	source_gene_common_name=CD24P4;source_gene=ENSG00000185275.6;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;gene_id=NA12877_ch_G0000464;gene_biotype=processed_pseudogene;gene_name=CD24P4;gene_sources=liftoff;ID=NA12877_ch_G0000464;Name=CD24P4
NA12877_chrY	CAT	transcript	19592452	19592694	1000	-	.	source_transcript=ENST00000382840.3;source_transcript_name=CD24P4-201;source_gene=ENSG00000185275.6;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000185275.6;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000382840.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382840.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD24P4;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;transcript_id=NA12877_ch_T0001362;gene_id=NA12877_ch_G0000464;Parent=NA12877_ch_G0000464;transcript_name=NA12877_ch_T0001362;gene_name=CD24P4;ID=NA12877_ch_T0001362;Name=CD24P4
NA12877_chrY	CAT	exon	19592452	19592694	.	-	.	source_transcript=ENST00000382840.3;source_transcript_name=CD24P4-201;source_gene=ENSG00000185275.6;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000185275.6;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000382840.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382840.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD24P4;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;transcript_id=NA12877_ch_T0001362;gene_id=NA12877_ch_G0000464;Parent=NA12877_ch_T0001362;transcript_name=NA12877_ch_T0001362;gene_name=CD24P4;ID=exon:NA12877_ch_T0001362:0;Name=CD24P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19618968	19619072	.	-	.	source_gene_common_name=RNU6-255P;source_gene=ENSG00000252766.1;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;gene_id=NA12877_ch_G0000465;gene_biotype=snRNA;gene_name=RNU6-255P;gene_sources=liftoff;ID=NA12877_ch_G0000465;Name=RNU6-255P
NA12877_chrY	CAT	transcript	19618968	19619072	1000	-	.	source_transcript=ENST00000516957.1;source_transcript_name=RNU6-255P-201;source_gene=ENSG00000252766.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252766.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516957.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-255P;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;transcript_id=NA12877_ch_T0001363;gene_id=NA12877_ch_G0000465;Parent=NA12877_ch_G0000465;transcript_name=NA12877_ch_T0001363;gene_name=RNU6-255P;ID=NA12877_ch_T0001363;Name=RNU6-255P
NA12877_chrY	CAT	exon	19618968	19619072	.	-	.	source_transcript=ENST00000516957.1;source_transcript_name=RNU6-255P-201;source_gene=ENSG00000252766.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252766.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516957.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-255P;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;transcript_id=NA12877_ch_T0001363;gene_id=NA12877_ch_G0000465;Parent=NA12877_ch_T0001363;transcript_name=NA12877_ch_T0001363;gene_name=RNU6-255P;ID=exon:NA12877_ch_T0001363:0;Name=RNU6-255P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19676120	19687047	.	+	.	source_gene_common_name=ENSG00000310485;source_gene=ENSG00000310485.1;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;gene_id=NA12877_ch_G0000466;gene_biotype=lncRNA;gene_name=ENSG00000310485;gene_sources=liftoff;ID=NA12877_ch_G0000466;Name=ENSG00000310485
NA12877_chrY	CAT	transcript	19676120	19687047	1000	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=NA12877_ch_T0001366;gene_id=NA12877_ch_G0000466;Parent=NA12877_ch_G0000466;transcript_name=NA12877_ch_T0001366;gene_name=ENSG00000310485;ID=NA12877_ch_T0001366;Name=ENSG00000310485
NA12877_chrY	CAT	exon	19676120	19676243	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=NA12877_ch_T0001366;gene_id=NA12877_ch_G0000466;Parent=NA12877_ch_T0001366;transcript_name=NA12877_ch_T0001366;gene_name=ENSG00000310485;ID=exon:NA12877_ch_T0001366:0;Name=ENSG00000310485;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19676244	19686485	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=NA12877_ch_T0001366;gene_id=NA12877_ch_G0000466;Parent=NA12877_ch_T0001366;transcript_name=NA12877_ch_T0001366;gene_name=ENSG00000310485;ID=intron:NA12877_ch_T0001366:0;Name=ENSG00000310485;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19686486	19687047	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=NA12877_ch_T0001366;gene_id=NA12877_ch_G0000466;Parent=NA12877_ch_T0001366;transcript_name=NA12877_ch_T0001366;gene_name=ENSG00000310485;ID=exon:NA12877_ch_T0001366:1;Name=ENSG00000310485;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	19676167	19676503	1000	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=NA12877_ch_T0001367;gene_id=NA12877_ch_G0000466;Parent=NA12877_ch_G0000466;transcript_name=NA12877_ch_T0001367;gene_name=ENSG00000310485;ID=NA12877_ch_T0001367;Name=ENSG00000310485
NA12877_chrY	CAT	exon	19676167	19676243	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=NA12877_ch_T0001367;gene_id=NA12877_ch_G0000466;Parent=NA12877_ch_T0001367;transcript_name=NA12877_ch_T0001367;gene_name=ENSG00000310485;ID=exon:NA12877_ch_T0001367:0;Name=ENSG00000310485;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19676244	19676331	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=NA12877_ch_T0001367;gene_id=NA12877_ch_G0000466;Parent=NA12877_ch_T0001367;transcript_name=NA12877_ch_T0001367;gene_name=ENSG00000310485;ID=intron:NA12877_ch_T0001367:0;Name=ENSG00000310485;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19676332	19676503	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=NA12877_ch_T0001367;gene_id=NA12877_ch_G0000466;Parent=NA12877_ch_T0001367;transcript_name=NA12877_ch_T0001367;gene_name=ENSG00000310485;ID=exon:NA12877_ch_T0001367:1;Name=ENSG00000310485;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19853945	19860860	.	-	.	source_gene_common_name=ENSG00000274282;source_gene=ENSG00000274282.1;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;gene_id=NA12877_ch_G0000467;gene_biotype=processed_pseudogene;gene_name=ENSG00000274282;gene_sources=liftoff;ID=NA12877_ch_G0000467;Name=ENSG00000274282
NA12877_chrY	CAT	transcript	19853945	19860860	1000	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=NA12877_ch_T0001369;gene_id=NA12877_ch_G0000467;Parent=NA12877_ch_G0000467;transcript_name=NA12877_ch_T0001369;gene_name=ENSG00000274282;ID=NA12877_ch_T0001369;Name=ENSG00000274282
NA12877_chrY	CAT	exon	19853945	19854437	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=NA12877_ch_T0001369;gene_id=NA12877_ch_G0000467;Parent=NA12877_ch_T0001369;transcript_name=NA12877_ch_T0001369;gene_name=ENSG00000274282;ID=exon:NA12877_ch_T0001369:0;Name=ENSG00000274282;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	19854438	19860511	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=NA12877_ch_T0001369;gene_id=NA12877_ch_G0000467;Parent=NA12877_ch_T0001369;transcript_name=NA12877_ch_T0001369;gene_name=ENSG00000274282;ID=intron:NA12877_ch_T0001369:0;Name=ENSG00000274282;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	19860512	19860860	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=NA12877_ch_T0001369;gene_id=NA12877_ch_G0000467;Parent=NA12877_ch_T0001369;transcript_name=NA12877_ch_T0001369;gene_name=ENSG00000274282;ID=exon:NA12877_ch_T0001369:1;Name=ENSG00000274282;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	19927565	19928569	.	+	.	source_gene_common_name=GAPDHP19;source_gene=ENSG00000234529.2;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;gene_id=NA12877_ch_G0000468;gene_biotype=processed_pseudogene;gene_name=GAPDHP19;gene_sources=liftoff;ID=NA12877_ch_G0000468;Name=GAPDHP19
NA12877_chrY	CAT	transcript	19927565	19928569	1000	+	.	source_transcript=ENST00000431768.2;source_transcript_name=GAPDHP19-201;source_gene=ENSG00000234529.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234529.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431768.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431768.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP19;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;transcript_id=NA12877_ch_T0001370;gene_id=NA12877_ch_G0000468;Parent=NA12877_ch_G0000468;transcript_name=NA12877_ch_T0001370;gene_name=GAPDHP19;ID=NA12877_ch_T0001370;Name=GAPDHP19
NA12877_chrY	CAT	exon	19927565	19928569	.	+	.	source_transcript=ENST00000431768.2;source_transcript_name=GAPDHP19-201;source_gene=ENSG00000234529.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234529.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431768.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431768.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP19;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;transcript_id=NA12877_ch_T0001370;gene_id=NA12877_ch_G0000468;Parent=NA12877_ch_T0001370;transcript_name=NA12877_ch_T0001370;gene_name=GAPDHP19;ID=exon:NA12877_ch_T0001370:0;Name=GAPDHP19;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	20055423	20167267	.	-	.	source_gene_common_name=BCORP1;source_gene=ENSG00000291031.2;gene_id=NA12877_ch_G0000469;gene_biotype=lncRNA;gene_name=BCORP1;gene_sources=liftoff;ID=NA12877_ch_G0000469;Name=BCORP1
NA12877_chrY	CAT	transcript	20055423	20103163	1000	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=NA12877_ch_T0001371;Name=BCORP1
NA12877_chrY	CAT	exon	20055423	20056856	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=exon:NA12877_ch_T0001371:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20056857	20058910	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=intron:NA12877_ch_T0001371:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20058911	20059066	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=exon:NA12877_ch_T0001371:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20059067	20059275	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=intron:NA12877_ch_T0001371:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20059276	20059353	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=exon:NA12877_ch_T0001371:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20059354	20065092	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=intron:NA12877_ch_T0001371:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20065093	20065214	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=exon:NA12877_ch_T0001371:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20065215	20066442	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=intron:NA12877_ch_T0001371:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20066443	20067361	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=exon:NA12877_ch_T0001371:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20067362	20073891	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=intron:NA12877_ch_T0001371:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20073892	20074131	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=exon:NA12877_ch_T0001371:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20074132	20074626	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=intron:NA12877_ch_T0001371:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20074627	20074890	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=exon:NA12877_ch_T0001371:6;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20074891	20080155	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=intron:NA12877_ch_T0001371:6;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20080156	20080281	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=exon:NA12877_ch_T0001371:7;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20080282	20103018	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=intron:NA12877_ch_T0001371:7;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20103019	20103163	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001371;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001371;transcript_name=NA12877_ch_T0001371;gene_name=BCORP1;ID=exon:NA12877_ch_T0001371:8;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20056304	20103123	1000	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=NA12877_ch_T0001372;Name=BCORP1
NA12877_chrY	CAT	exon	20056304	20056856	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=exon:NA12877_ch_T0001372:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20056857	20057048	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=intron:NA12877_ch_T0001372:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20057049	20057109	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=exon:NA12877_ch_T0001372:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20057110	20058910	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=intron:NA12877_ch_T0001372:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20058911	20059066	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=exon:NA12877_ch_T0001372:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20059067	20059275	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=intron:NA12877_ch_T0001372:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20059276	20059353	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=exon:NA12877_ch_T0001372:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20059354	20059945	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=intron:NA12877_ch_T0001372:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20059946	20060091	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=exon:NA12877_ch_T0001372:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20060092	20065092	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=intron:NA12877_ch_T0001372:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20065093	20065214	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=exon:NA12877_ch_T0001372:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20065215	20066442	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=intron:NA12877_ch_T0001372:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20066443	20067361	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=exon:NA12877_ch_T0001372:6;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20067362	20073891	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=intron:NA12877_ch_T0001372:6;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20073892	20074131	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=exon:NA12877_ch_T0001372:7;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20074132	20074626	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=intron:NA12877_ch_T0001372:7;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20074627	20074890	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=exon:NA12877_ch_T0001372:8;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20074891	20080155	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=intron:NA12877_ch_T0001372:8;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20080156	20080281	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=exon:NA12877_ch_T0001372:9;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20080282	20103018	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=intron:NA12877_ch_T0001372:9;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20103019	20103123	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001372;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001372;transcript_name=NA12877_ch_T0001372;gene_name=BCORP1;ID=exon:NA12877_ch_T0001372:10;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20056386	20167079	1000	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=NA12877_ch_T0001373;Name=BCORP1
NA12877_chrY	CAT	exon	20056386	20056856	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=exon:NA12877_ch_T0001373:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20056857	20058910	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=intron:NA12877_ch_T0001373:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20058911	20059066	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=exon:NA12877_ch_T0001373:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20059067	20059275	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=intron:NA12877_ch_T0001373:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20059276	20059353	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=exon:NA12877_ch_T0001373:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20059354	20059945	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=intron:NA12877_ch_T0001373:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20059946	20060091	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=exon:NA12877_ch_T0001373:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20060092	20065092	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=intron:NA12877_ch_T0001373:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20065093	20065214	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=exon:NA12877_ch_T0001373:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20065215	20066442	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=intron:NA12877_ch_T0001373:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20066443	20067361	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=exon:NA12877_ch_T0001373:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20067362	20073891	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=intron:NA12877_ch_T0001373:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20073892	20074131	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=exon:NA12877_ch_T0001373:6;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20074132	20074626	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=intron:NA12877_ch_T0001373:6;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20074627	20074890	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=exon:NA12877_ch_T0001373:7;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20074891	20080155	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=intron:NA12877_ch_T0001373:7;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20080156	20080281	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=exon:NA12877_ch_T0001373:8;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20080282	20166968	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=intron:NA12877_ch_T0001373:8;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167079	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001373;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001373;transcript_name=NA12877_ch_T0001373;gene_name=BCORP1;ID=exon:NA12877_ch_T0001373:9;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20058021	20060091	1000	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001375;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001375;gene_name=BCORP1;ID=NA12877_ch_T0001375;Name=BCORP1
NA12877_chrY	CAT	exon	20058021	20059066	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001375;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001375;transcript_name=NA12877_ch_T0001375;gene_name=BCORP1;ID=exon:NA12877_ch_T0001375:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20059067	20059275	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001375;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001375;transcript_name=NA12877_ch_T0001375;gene_name=BCORP1;ID=intron:NA12877_ch_T0001375:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20059276	20059353	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001375;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001375;transcript_name=NA12877_ch_T0001375;gene_name=BCORP1;ID=exon:NA12877_ch_T0001375:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20059354	20059945	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001375;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001375;transcript_name=NA12877_ch_T0001375;gene_name=BCORP1;ID=intron:NA12877_ch_T0001375:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20059946	20060091	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001375;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001375;transcript_name=NA12877_ch_T0001375;gene_name=BCORP1;ID=exon:NA12877_ch_T0001375:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20137033	20167017	1000	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001376;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001376;gene_name=BCORP1;ID=NA12877_ch_T0001376;Name=BCORP1
NA12877_chrY	CAT	exon	20137033	20137197	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001376;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001376;transcript_name=NA12877_ch_T0001376;gene_name=BCORP1;ID=exon:NA12877_ch_T0001376:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20137198	20139580	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001376;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001376;transcript_name=NA12877_ch_T0001376;gene_name=BCORP1;ID=intron:NA12877_ch_T0001376:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20139581	20139807	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001376;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001376;transcript_name=NA12877_ch_T0001376;gene_name=BCORP1;ID=exon:NA12877_ch_T0001376:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20139808	20158026	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001376;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001376;transcript_name=NA12877_ch_T0001376;gene_name=BCORP1;ID=intron:NA12877_ch_T0001376:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001376;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001376;transcript_name=NA12877_ch_T0001376;gene_name=BCORP1;ID=exon:NA12877_ch_T0001376:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001376;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001376;transcript_name=NA12877_ch_T0001376;gene_name=BCORP1;ID=intron:NA12877_ch_T0001376:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167017	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001376;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001376;transcript_name=NA12877_ch_T0001376;gene_name=BCORP1;ID=exon:NA12877_ch_T0001376:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20137034	20166994	1000	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001377;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001377;gene_name=BCORP1;ID=NA12877_ch_T0001377;Name=BCORP1
NA12877_chrY	CAT	exon	20137034	20137197	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001377;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001377;transcript_name=NA12877_ch_T0001377;gene_name=BCORP1;ID=exon:NA12877_ch_T0001377:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20137198	20139580	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001377;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001377;transcript_name=NA12877_ch_T0001377;gene_name=BCORP1;ID=intron:NA12877_ch_T0001377:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20139581	20139807	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001377;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001377;transcript_name=NA12877_ch_T0001377;gene_name=BCORP1;ID=exon:NA12877_ch_T0001377:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20139808	20140175	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001377;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001377;transcript_name=NA12877_ch_T0001377;gene_name=BCORP1;ID=intron:NA12877_ch_T0001377:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20140176	20140287	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001377;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001377;transcript_name=NA12877_ch_T0001377;gene_name=BCORP1;ID=exon:NA12877_ch_T0001377:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20140288	20158026	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001377;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001377;transcript_name=NA12877_ch_T0001377;gene_name=BCORP1;ID=intron:NA12877_ch_T0001377:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001377;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001377;transcript_name=NA12877_ch_T0001377;gene_name=BCORP1;ID=exon:NA12877_ch_T0001377:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001377;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001377;transcript_name=NA12877_ch_T0001377;gene_name=BCORP1;ID=intron:NA12877_ch_T0001377:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001377;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001377;transcript_name=NA12877_ch_T0001377;gene_name=BCORP1;ID=exon:NA12877_ch_T0001377:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001377;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001377;transcript_name=NA12877_ch_T0001377;gene_name=BCORP1;ID=intron:NA12877_ch_T0001377:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166994	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001377;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001377;transcript_name=NA12877_ch_T0001377;gene_name=BCORP1;ID=exon:NA12877_ch_T0001377:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20139422	20167031	1000	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001378;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001378;gene_name=BCORP1;ID=NA12877_ch_T0001378;Name=BCORP1
NA12877_chrY	CAT	exon	20139422	20139807	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001378;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001378;transcript_name=NA12877_ch_T0001378;gene_name=BCORP1;ID=exon:NA12877_ch_T0001378:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20139808	20140175	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001378;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001378;transcript_name=NA12877_ch_T0001378;gene_name=BCORP1;ID=intron:NA12877_ch_T0001378:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20140176	20140287	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001378;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001378;transcript_name=NA12877_ch_T0001378;gene_name=BCORP1;ID=exon:NA12877_ch_T0001378:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20140288	20158010	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001378;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001378;transcript_name=NA12877_ch_T0001378;gene_name=BCORP1;ID=intron:NA12877_ch_T0001378:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001378;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001378;transcript_name=NA12877_ch_T0001378;gene_name=BCORP1;ID=exon:NA12877_ch_T0001378:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001378;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001378;transcript_name=NA12877_ch_T0001378;gene_name=BCORP1;ID=intron:NA12877_ch_T0001378:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167031	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001378;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001378;transcript_name=NA12877_ch_T0001378;gene_name=BCORP1;ID=exon:NA12877_ch_T0001378:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20139425	20167017	1000	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001379;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001379;gene_name=BCORP1;ID=NA12877_ch_T0001379;Name=BCORP1
NA12877_chrY	CAT	exon	20139425	20139807	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001379;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001379;transcript_name=NA12877_ch_T0001379;gene_name=BCORP1;ID=exon:NA12877_ch_T0001379:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20139808	20158026	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001379;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001379;transcript_name=NA12877_ch_T0001379;gene_name=BCORP1;ID=intron:NA12877_ch_T0001379:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001379;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001379;transcript_name=NA12877_ch_T0001379;gene_name=BCORP1;ID=exon:NA12877_ch_T0001379:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001379;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001379;transcript_name=NA12877_ch_T0001379;gene_name=BCORP1;ID=intron:NA12877_ch_T0001379:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167017	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001379;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001379;transcript_name=NA12877_ch_T0001379;gene_name=BCORP1;ID=exon:NA12877_ch_T0001379:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20139474	20166996	1000	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001380;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001380;gene_name=BCORP1;ID=NA12877_ch_T0001380;Name=BCORP1
NA12877_chrY	CAT	exon	20139474	20139807	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001380;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001380;transcript_name=NA12877_ch_T0001380;gene_name=BCORP1;ID=exon:NA12877_ch_T0001380:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20139808	20140207	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001380;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001380;transcript_name=NA12877_ch_T0001380;gene_name=BCORP1;ID=intron:NA12877_ch_T0001380:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20140208	20140287	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001380;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001380;transcript_name=NA12877_ch_T0001380;gene_name=BCORP1;ID=exon:NA12877_ch_T0001380:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20140288	20158026	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001380;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001380;transcript_name=NA12877_ch_T0001380;gene_name=BCORP1;ID=intron:NA12877_ch_T0001380:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001380;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001380;transcript_name=NA12877_ch_T0001380;gene_name=BCORP1;ID=exon:NA12877_ch_T0001380:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001380;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001380;transcript_name=NA12877_ch_T0001380;gene_name=BCORP1;ID=intron:NA12877_ch_T0001380:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166996	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001380;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001380;transcript_name=NA12877_ch_T0001380;gene_name=BCORP1;ID=exon:NA12877_ch_T0001380:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20139529	20167013	1000	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001381;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001381;gene_name=BCORP1;ID=NA12877_ch_T0001381;Name=BCORP1
NA12877_chrY	CAT	exon	20139529	20139807	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001381;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001381;transcript_name=NA12877_ch_T0001381;gene_name=BCORP1;ID=exon:NA12877_ch_T0001381:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20139808	20140175	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001381;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001381;transcript_name=NA12877_ch_T0001381;gene_name=BCORP1;ID=intron:NA12877_ch_T0001381:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20140176	20140287	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001381;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001381;transcript_name=NA12877_ch_T0001381;gene_name=BCORP1;ID=exon:NA12877_ch_T0001381:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20140288	20166968	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001381;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001381;transcript_name=NA12877_ch_T0001381;gene_name=BCORP1;ID=intron:NA12877_ch_T0001381:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167013	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001381;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001381;transcript_name=NA12877_ch_T0001381;gene_name=BCORP1;ID=exon:NA12877_ch_T0001381:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20139556	20166996	1000	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001382;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001382;gene_name=BCORP1;ID=NA12877_ch_T0001382;Name=BCORP1
NA12877_chrY	CAT	exon	20139556	20139807	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001382;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001382;transcript_name=NA12877_ch_T0001382;gene_name=BCORP1;ID=exon:NA12877_ch_T0001382:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20139808	20158010	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001382;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001382;transcript_name=NA12877_ch_T0001382;gene_name=BCORP1;ID=intron:NA12877_ch_T0001382:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001382;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001382;transcript_name=NA12877_ch_T0001382;gene_name=BCORP1;ID=exon:NA12877_ch_T0001382:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001382;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001382;transcript_name=NA12877_ch_T0001382;gene_name=BCORP1;ID=intron:NA12877_ch_T0001382:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166996	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001382;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001382;transcript_name=NA12877_ch_T0001382;gene_name=BCORP1;ID=exon:NA12877_ch_T0001382:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20139896	20167035	1000	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001383;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001383;gene_name=BCORP1;ID=NA12877_ch_T0001383;Name=BCORP1
NA12877_chrY	CAT	exon	20139896	20140287	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001383;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001383;transcript_name=NA12877_ch_T0001383;gene_name=BCORP1;ID=exon:NA12877_ch_T0001383:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20140288	20158026	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001383;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001383;transcript_name=NA12877_ch_T0001383;gene_name=BCORP1;ID=intron:NA12877_ch_T0001383:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001383;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001383;transcript_name=NA12877_ch_T0001383;gene_name=BCORP1;ID=exon:NA12877_ch_T0001383:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001383;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001383;transcript_name=NA12877_ch_T0001383;gene_name=BCORP1;ID=intron:NA12877_ch_T0001383:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167035	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001383;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001383;transcript_name=NA12877_ch_T0001383;gene_name=BCORP1;ID=exon:NA12877_ch_T0001383:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20153913	20167038	1000	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001384;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001384;gene_name=BCORP1;ID=NA12877_ch_T0001384;Name=BCORP1
NA12877_chrY	CAT	exon	20153913	20156799	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001384;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001384;transcript_name=NA12877_ch_T0001384;gene_name=BCORP1;ID=exon:NA12877_ch_T0001384:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156800	20157216	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001384;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001384;transcript_name=NA12877_ch_T0001384;gene_name=BCORP1;ID=intron:NA12877_ch_T0001384:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001384;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001384;transcript_name=NA12877_ch_T0001384;gene_name=BCORP1;ID=exon:NA12877_ch_T0001384:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001384;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001384;transcript_name=NA12877_ch_T0001384;gene_name=BCORP1;ID=intron:NA12877_ch_T0001384:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001384;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001384;transcript_name=NA12877_ch_T0001384;gene_name=BCORP1;ID=exon:NA12877_ch_T0001384:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001384;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001384;transcript_name=NA12877_ch_T0001384;gene_name=BCORP1;ID=intron:NA12877_ch_T0001384:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167038	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001384;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001384;transcript_name=NA12877_ch_T0001384;gene_name=BCORP1;ID=exon:NA12877_ch_T0001384:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20154863	20167255	1000	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001385;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001385;gene_name=BCORP1;ID=NA12877_ch_T0001385;Name=BCORP1
NA12877_chrY	CAT	exon	20154863	20155541	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001385;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001385;transcript_name=NA12877_ch_T0001385;gene_name=BCORP1;ID=exon:NA12877_ch_T0001385:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001385;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001385;transcript_name=NA12877_ch_T0001385;gene_name=BCORP1;ID=intron:NA12877_ch_T0001385:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001385;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001385;transcript_name=NA12877_ch_T0001385;gene_name=BCORP1;ID=exon:NA12877_ch_T0001385:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001385;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001385;transcript_name=NA12877_ch_T0001385;gene_name=BCORP1;ID=intron:NA12877_ch_T0001385:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001385;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001385;transcript_name=NA12877_ch_T0001385;gene_name=BCORP1;ID=exon:NA12877_ch_T0001385:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001385;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001385;transcript_name=NA12877_ch_T0001385;gene_name=BCORP1;ID=intron:NA12877_ch_T0001385:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167255	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001385;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001385;transcript_name=NA12877_ch_T0001385;gene_name=BCORP1;ID=exon:NA12877_ch_T0001385:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155373	20167242	1000	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001386;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001386;gene_name=BCORP1;ID=NA12877_ch_T0001386;Name=BCORP1
NA12877_chrY	CAT	exon	20155373	20155541	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001386;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001386;transcript_name=NA12877_ch_T0001386;gene_name=BCORP1;ID=exon:NA12877_ch_T0001386:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001386;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001386;transcript_name=NA12877_ch_T0001386;gene_name=BCORP1;ID=intron:NA12877_ch_T0001386:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001386;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001386;transcript_name=NA12877_ch_T0001386;gene_name=BCORP1;ID=exon:NA12877_ch_T0001386:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001386;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001386;transcript_name=NA12877_ch_T0001386;gene_name=BCORP1;ID=intron:NA12877_ch_T0001386:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001386;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001386;transcript_name=NA12877_ch_T0001386;gene_name=BCORP1;ID=exon:NA12877_ch_T0001386:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001386;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001386;transcript_name=NA12877_ch_T0001386;gene_name=BCORP1;ID=intron:NA12877_ch_T0001386:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167242	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001386;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001386;transcript_name=NA12877_ch_T0001386;gene_name=BCORP1;ID=exon:NA12877_ch_T0001386:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155375	20167251	1000	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001387;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001387;gene_name=BCORP1;ID=NA12877_ch_T0001387;Name=BCORP1
NA12877_chrY	CAT	exon	20155375	20155541	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001387;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001387;transcript_name=NA12877_ch_T0001387;gene_name=BCORP1;ID=exon:NA12877_ch_T0001387:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20158010	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001387;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001387;transcript_name=NA12877_ch_T0001387;gene_name=BCORP1;ID=intron:NA12877_ch_T0001387:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001387;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001387;transcript_name=NA12877_ch_T0001387;gene_name=BCORP1;ID=exon:NA12877_ch_T0001387:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001387;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001387;transcript_name=NA12877_ch_T0001387;gene_name=BCORP1;ID=intron:NA12877_ch_T0001387:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167251	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001387;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001387;transcript_name=NA12877_ch_T0001387;gene_name=BCORP1;ID=exon:NA12877_ch_T0001387:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155375	20167251	1000	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001388;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001388;gene_name=BCORP1;ID=NA12877_ch_T0001388;Name=BCORP1
NA12877_chrY	CAT	exon	20155375	20155541	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001388;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001388;transcript_name=NA12877_ch_T0001388;gene_name=BCORP1;ID=exon:NA12877_ch_T0001388:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20158026	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001388;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001388;transcript_name=NA12877_ch_T0001388;gene_name=BCORP1;ID=intron:NA12877_ch_T0001388:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001388;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001388;transcript_name=NA12877_ch_T0001388;gene_name=BCORP1;ID=exon:NA12877_ch_T0001388:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001388;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001388;transcript_name=NA12877_ch_T0001388;gene_name=BCORP1;ID=intron:NA12877_ch_T0001388:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167251	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001388;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001388;transcript_name=NA12877_ch_T0001388;gene_name=BCORP1;ID=exon:NA12877_ch_T0001388:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167235	1000	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001389;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001389;gene_name=BCORP1;ID=NA12877_ch_T0001389;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001389;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001389;transcript_name=NA12877_ch_T0001389;gene_name=BCORP1;ID=exon:NA12877_ch_T0001389:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20158010	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001389;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001389;transcript_name=NA12877_ch_T0001389;gene_name=BCORP1;ID=intron:NA12877_ch_T0001389:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001389;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001389;transcript_name=NA12877_ch_T0001389;gene_name=BCORP1;ID=exon:NA12877_ch_T0001389:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001389;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001389;transcript_name=NA12877_ch_T0001389;gene_name=BCORP1;ID=intron:NA12877_ch_T0001389:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001389;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001389;transcript_name=NA12877_ch_T0001389;gene_name=BCORP1;ID=exon:NA12877_ch_T0001389:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001389;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001389;transcript_name=NA12877_ch_T0001389;gene_name=BCORP1;ID=intron:NA12877_ch_T0001389:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167235	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001389;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001389;transcript_name=NA12877_ch_T0001389;gene_name=BCORP1;ID=exon:NA12877_ch_T0001389:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167203	1000	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001390;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001390;gene_name=BCORP1;ID=NA12877_ch_T0001390;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001390;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001390;transcript_name=NA12877_ch_T0001390;gene_name=BCORP1;ID=exon:NA12877_ch_T0001390:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001390;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001390;transcript_name=NA12877_ch_T0001390;gene_name=BCORP1;ID=intron:NA12877_ch_T0001390:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001390;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001390;transcript_name=NA12877_ch_T0001390;gene_name=BCORP1;ID=exon:NA12877_ch_T0001390:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001390;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001390;transcript_name=NA12877_ch_T0001390;gene_name=BCORP1;ID=intron:NA12877_ch_T0001390:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001390;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001390;transcript_name=NA12877_ch_T0001390;gene_name=BCORP1;ID=exon:NA12877_ch_T0001390:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001390;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001390;transcript_name=NA12877_ch_T0001390;gene_name=BCORP1;ID=intron:NA12877_ch_T0001390:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001390;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001390;transcript_name=NA12877_ch_T0001390;gene_name=BCORP1;ID=exon:NA12877_ch_T0001390:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001390;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001390;transcript_name=NA12877_ch_T0001390;gene_name=BCORP1;ID=intron:NA12877_ch_T0001390:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167203	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001390;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001390;transcript_name=NA12877_ch_T0001390;gene_name=BCORP1;ID=exon:NA12877_ch_T0001390:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20166996	1000	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001391;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001391;gene_name=BCORP1;ID=NA12877_ch_T0001391;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001391;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001391;transcript_name=NA12877_ch_T0001391;gene_name=BCORP1;ID=exon:NA12877_ch_T0001391:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001391;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001391;transcript_name=NA12877_ch_T0001391;gene_name=BCORP1;ID=intron:NA12877_ch_T0001391:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001391;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001391;transcript_name=NA12877_ch_T0001391;gene_name=BCORP1;ID=exon:NA12877_ch_T0001391:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20156042	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001391;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001391;transcript_name=NA12877_ch_T0001391;gene_name=BCORP1;ID=intron:NA12877_ch_T0001391:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20156043	20156096	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001391;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001391;transcript_name=NA12877_ch_T0001391;gene_name=BCORP1;ID=exon:NA12877_ch_T0001391:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156097	20158026	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001391;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001391;transcript_name=NA12877_ch_T0001391;gene_name=BCORP1;ID=intron:NA12877_ch_T0001391:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001391;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001391;transcript_name=NA12877_ch_T0001391;gene_name=BCORP1;ID=exon:NA12877_ch_T0001391:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001391;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001391;transcript_name=NA12877_ch_T0001391;gene_name=BCORP1;ID=intron:NA12877_ch_T0001391:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001391;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001391;transcript_name=NA12877_ch_T0001391;gene_name=BCORP1;ID=exon:NA12877_ch_T0001391:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001391;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001391;transcript_name=NA12877_ch_T0001391;gene_name=BCORP1;ID=intron:NA12877_ch_T0001391:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166996	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001391;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001391;transcript_name=NA12877_ch_T0001391;gene_name=BCORP1;ID=exon:NA12877_ch_T0001391:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20166994	1000	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001392;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001392;gene_name=BCORP1;ID=NA12877_ch_T0001392;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001392;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001392;transcript_name=NA12877_ch_T0001392;gene_name=BCORP1;ID=exon:NA12877_ch_T0001392:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155997	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001392;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001392;transcript_name=NA12877_ch_T0001392;gene_name=BCORP1;ID=intron:NA12877_ch_T0001392:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155998	20156096	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001392;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001392;transcript_name=NA12877_ch_T0001392;gene_name=BCORP1;ID=exon:NA12877_ch_T0001392:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156097	20157216	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001392;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001392;transcript_name=NA12877_ch_T0001392;gene_name=BCORP1;ID=intron:NA12877_ch_T0001392:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001392;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001392;transcript_name=NA12877_ch_T0001392;gene_name=BCORP1;ID=exon:NA12877_ch_T0001392:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001392;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001392;transcript_name=NA12877_ch_T0001392;gene_name=BCORP1;ID=intron:NA12877_ch_T0001392:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001392;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001392;transcript_name=NA12877_ch_T0001392;gene_name=BCORP1;ID=exon:NA12877_ch_T0001392:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001392;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001392;transcript_name=NA12877_ch_T0001392;gene_name=BCORP1;ID=intron:NA12877_ch_T0001392:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166994	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001392;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001392;transcript_name=NA12877_ch_T0001392;gene_name=BCORP1;ID=exon:NA12877_ch_T0001392:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167024	1000	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001393;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001393;gene_name=BCORP1;ID=NA12877_ch_T0001393;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001393;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001393;transcript_name=NA12877_ch_T0001393;gene_name=BCORP1;ID=exon:NA12877_ch_T0001393:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20158010	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001393;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001393;transcript_name=NA12877_ch_T0001393;gene_name=BCORP1;ID=intron:NA12877_ch_T0001393:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001393;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001393;transcript_name=NA12877_ch_T0001393;gene_name=BCORP1;ID=exon:NA12877_ch_T0001393:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166963	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001393;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001393;transcript_name=NA12877_ch_T0001393;gene_name=BCORP1;ID=intron:NA12877_ch_T0001393:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166964	20167024	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001393;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001393;transcript_name=NA12877_ch_T0001393;gene_name=BCORP1;ID=exon:NA12877_ch_T0001393:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167026	1000	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001394;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001394;gene_name=BCORP1;ID=NA12877_ch_T0001394;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001394;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001394;transcript_name=NA12877_ch_T0001394;gene_name=BCORP1;ID=exon:NA12877_ch_T0001394:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001394;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001394;transcript_name=NA12877_ch_T0001394;gene_name=BCORP1;ID=intron:NA12877_ch_T0001394:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001394;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001394;transcript_name=NA12877_ch_T0001394;gene_name=BCORP1;ID=exon:NA12877_ch_T0001394:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20156042	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001394;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001394;transcript_name=NA12877_ch_T0001394;gene_name=BCORP1;ID=intron:NA12877_ch_T0001394:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20156043	20156171	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001394;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001394;transcript_name=NA12877_ch_T0001394;gene_name=BCORP1;ID=exon:NA12877_ch_T0001394:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156172	20157216	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001394;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001394;transcript_name=NA12877_ch_T0001394;gene_name=BCORP1;ID=intron:NA12877_ch_T0001394:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001394;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001394;transcript_name=NA12877_ch_T0001394;gene_name=BCORP1;ID=exon:NA12877_ch_T0001394:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001394;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001394;transcript_name=NA12877_ch_T0001394;gene_name=BCORP1;ID=intron:NA12877_ch_T0001394:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001394;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001394;transcript_name=NA12877_ch_T0001394;gene_name=BCORP1;ID=exon:NA12877_ch_T0001394:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001394;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001394;transcript_name=NA12877_ch_T0001394;gene_name=BCORP1;ID=intron:NA12877_ch_T0001394:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167026	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001394;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001394;transcript_name=NA12877_ch_T0001394;gene_name=BCORP1;ID=exon:NA12877_ch_T0001394:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20166998	1000	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001395;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001395;gene_name=BCORP1;ID=NA12877_ch_T0001395;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001395;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001395;transcript_name=NA12877_ch_T0001395;gene_name=BCORP1;ID=exon:NA12877_ch_T0001395:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001395;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001395;transcript_name=NA12877_ch_T0001395;gene_name=BCORP1;ID=intron:NA12877_ch_T0001395:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001395;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001395;transcript_name=NA12877_ch_T0001395;gene_name=BCORP1;ID=exon:NA12877_ch_T0001395:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20157216	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001395;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001395;transcript_name=NA12877_ch_T0001395;gene_name=BCORP1;ID=intron:NA12877_ch_T0001395:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001395;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001395;transcript_name=NA12877_ch_T0001395;gene_name=BCORP1;ID=exon:NA12877_ch_T0001395:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001395;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001395;transcript_name=NA12877_ch_T0001395;gene_name=BCORP1;ID=intron:NA12877_ch_T0001395:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001395;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001395;transcript_name=NA12877_ch_T0001395;gene_name=BCORP1;ID=exon:NA12877_ch_T0001395:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001395;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001395;transcript_name=NA12877_ch_T0001395;gene_name=BCORP1;ID=intron:NA12877_ch_T0001395:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001395;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001395;transcript_name=NA12877_ch_T0001395;gene_name=BCORP1;ID=exon:NA12877_ch_T0001395:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001395;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001395;transcript_name=NA12877_ch_T0001395;gene_name=BCORP1;ID=intron:NA12877_ch_T0001395:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166998	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001395;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001395;transcript_name=NA12877_ch_T0001395;gene_name=BCORP1;ID=exon:NA12877_ch_T0001395:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167022	1000	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001396;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001396;gene_name=BCORP1;ID=NA12877_ch_T0001396;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001396;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001396;transcript_name=NA12877_ch_T0001396;gene_name=BCORP1;ID=exon:NA12877_ch_T0001396:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001396;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001396;transcript_name=NA12877_ch_T0001396;gene_name=BCORP1;ID=intron:NA12877_ch_T0001396:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001396;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001396;transcript_name=NA12877_ch_T0001396;gene_name=BCORP1;ID=exon:NA12877_ch_T0001396:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20158010	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001396;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001396;transcript_name=NA12877_ch_T0001396;gene_name=BCORP1;ID=intron:NA12877_ch_T0001396:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001396;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001396;transcript_name=NA12877_ch_T0001396;gene_name=BCORP1;ID=exon:NA12877_ch_T0001396:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001396;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001396;transcript_name=NA12877_ch_T0001396;gene_name=BCORP1;ID=intron:NA12877_ch_T0001396:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167022	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001396;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001396;transcript_name=NA12877_ch_T0001396;gene_name=BCORP1;ID=exon:NA12877_ch_T0001396:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167031	1000	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001397;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001397;gene_name=BCORP1;ID=NA12877_ch_T0001397;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001397;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001397;transcript_name=NA12877_ch_T0001397;gene_name=BCORP1;ID=exon:NA12877_ch_T0001397:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001397;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001397;transcript_name=NA12877_ch_T0001397;gene_name=BCORP1;ID=intron:NA12877_ch_T0001397:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001397;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001397;transcript_name=NA12877_ch_T0001397;gene_name=BCORP1;ID=exon:NA12877_ch_T0001397:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001397;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001397;transcript_name=NA12877_ch_T0001397;gene_name=BCORP1;ID=intron:NA12877_ch_T0001397:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001397;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001397;transcript_name=NA12877_ch_T0001397;gene_name=BCORP1;ID=exon:NA12877_ch_T0001397:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20158600	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001397;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001397;transcript_name=NA12877_ch_T0001397;gene_name=BCORP1;ID=intron:NA12877_ch_T0001397:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158601	20158681	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001397;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001397;transcript_name=NA12877_ch_T0001397;gene_name=BCORP1;ID=exon:NA12877_ch_T0001397:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158682	20166968	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001397;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001397;transcript_name=NA12877_ch_T0001397;gene_name=BCORP1;ID=intron:NA12877_ch_T0001397:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167031	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001397;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001397;transcript_name=NA12877_ch_T0001397;gene_name=BCORP1;ID=exon:NA12877_ch_T0001397:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167022	1000	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001398;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001398;gene_name=BCORP1;ID=NA12877_ch_T0001398;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001398;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001398;transcript_name=NA12877_ch_T0001398;gene_name=BCORP1;ID=exon:NA12877_ch_T0001398:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001398;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001398;transcript_name=NA12877_ch_T0001398;gene_name=BCORP1;ID=intron:NA12877_ch_T0001398:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155955	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001398;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001398;transcript_name=NA12877_ch_T0001398;gene_name=BCORP1;ID=exon:NA12877_ch_T0001398:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155956	20158026	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001398;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001398;transcript_name=NA12877_ch_T0001398;gene_name=BCORP1;ID=intron:NA12877_ch_T0001398:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001398;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001398;transcript_name=NA12877_ch_T0001398;gene_name=BCORP1;ID=exon:NA12877_ch_T0001398:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001398;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001398;transcript_name=NA12877_ch_T0001398;gene_name=BCORP1;ID=intron:NA12877_ch_T0001398:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167022	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001398;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001398;transcript_name=NA12877_ch_T0001398;gene_name=BCORP1;ID=exon:NA12877_ch_T0001398:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167022	1000	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=NA12877_ch_T0001399;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=exon:NA12877_ch_T0001399:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=intron:NA12877_ch_T0001399:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=exon:NA12877_ch_T0001399:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20156042	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=intron:NA12877_ch_T0001399:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20156043	20156096	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=exon:NA12877_ch_T0001399:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156097	20157216	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=intron:NA12877_ch_T0001399:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=exon:NA12877_ch_T0001399:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=intron:NA12877_ch_T0001399:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=exon:NA12877_ch_T0001399:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20158600	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=intron:NA12877_ch_T0001399:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158601	20158681	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=exon:NA12877_ch_T0001399:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158682	20166968	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=intron:NA12877_ch_T0001399:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167022	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001399;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001399;transcript_name=NA12877_ch_T0001399;gene_name=BCORP1;ID=exon:NA12877_ch_T0001399:6;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167031	1000	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001400;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001400;gene_name=BCORP1;ID=NA12877_ch_T0001400;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001400;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001400;transcript_name=NA12877_ch_T0001400;gene_name=BCORP1;ID=exon:NA12877_ch_T0001400:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001400;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001400;transcript_name=NA12877_ch_T0001400;gene_name=BCORP1;ID=intron:NA12877_ch_T0001400:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001400;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001400;transcript_name=NA12877_ch_T0001400;gene_name=BCORP1;ID=exon:NA12877_ch_T0001400:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001400;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001400;transcript_name=NA12877_ch_T0001400;gene_name=BCORP1;ID=intron:NA12877_ch_T0001400:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001400;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001400;transcript_name=NA12877_ch_T0001400;gene_name=BCORP1;ID=exon:NA12877_ch_T0001400:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166963	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001400;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001400;transcript_name=NA12877_ch_T0001400;gene_name=BCORP1;ID=intron:NA12877_ch_T0001400:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166964	20167031	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001400;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001400;transcript_name=NA12877_ch_T0001400;gene_name=BCORP1;ID=exon:NA12877_ch_T0001400:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167011	1000	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001401;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001401;gene_name=BCORP1;ID=NA12877_ch_T0001401;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001401;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001401;transcript_name=NA12877_ch_T0001401;gene_name=BCORP1;ID=exon:NA12877_ch_T0001401:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001401;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001401;transcript_name=NA12877_ch_T0001401;gene_name=BCORP1;ID=intron:NA12877_ch_T0001401:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001401;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001401;transcript_name=NA12877_ch_T0001401;gene_name=BCORP1;ID=exon:NA12877_ch_T0001401:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20157861	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001401;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001401;transcript_name=NA12877_ch_T0001401;gene_name=BCORP1;ID=intron:NA12877_ch_T0001401:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157862	20157963	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001401;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001401;transcript_name=NA12877_ch_T0001401;gene_name=BCORP1;ID=exon:NA12877_ch_T0001401:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157964	20166968	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001401;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001401;transcript_name=NA12877_ch_T0001401;gene_name=BCORP1;ID=intron:NA12877_ch_T0001401:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167011	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001401;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001401;transcript_name=NA12877_ch_T0001401;gene_name=BCORP1;ID=exon:NA12877_ch_T0001401:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167046	1000	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001402;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001402;gene_name=BCORP1;ID=NA12877_ch_T0001402;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001402;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001402;transcript_name=NA12877_ch_T0001402;gene_name=BCORP1;ID=exon:NA12877_ch_T0001402:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20158026	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001402;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001402;transcript_name=NA12877_ch_T0001402;gene_name=BCORP1;ID=intron:NA12877_ch_T0001402:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001402;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001402;transcript_name=NA12877_ch_T0001402;gene_name=BCORP1;ID=exon:NA12877_ch_T0001402:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166963	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001402;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001402;transcript_name=NA12877_ch_T0001402;gene_name=BCORP1;ID=intron:NA12877_ch_T0001402:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166964	20167046	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001402;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001402;transcript_name=NA12877_ch_T0001402;gene_name=BCORP1;ID=exon:NA12877_ch_T0001402:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167016	1000	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001403;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001403;gene_name=BCORP1;ID=NA12877_ch_T0001403;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001403;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001403;transcript_name=NA12877_ch_T0001403;gene_name=BCORP1;ID=exon:NA12877_ch_T0001403:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001403;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001403;transcript_name=NA12877_ch_T0001403;gene_name=BCORP1;ID=intron:NA12877_ch_T0001403:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155955	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001403;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001403;transcript_name=NA12877_ch_T0001403;gene_name=BCORP1;ID=exon:NA12877_ch_T0001403:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155956	20158010	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001403;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001403;transcript_name=NA12877_ch_T0001403;gene_name=BCORP1;ID=intron:NA12877_ch_T0001403:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001403;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001403;transcript_name=NA12877_ch_T0001403;gene_name=BCORP1;ID=exon:NA12877_ch_T0001403:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001403;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001403;transcript_name=NA12877_ch_T0001403;gene_name=BCORP1;ID=intron:NA12877_ch_T0001403:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167016	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001403;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001403;transcript_name=NA12877_ch_T0001403;gene_name=BCORP1;ID=exon:NA12877_ch_T0001403:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20166994	1000	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001404;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001404;gene_name=BCORP1;ID=NA12877_ch_T0001404;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001404;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001404;transcript_name=NA12877_ch_T0001404;gene_name=BCORP1;ID=exon:NA12877_ch_T0001404:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001404;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001404;transcript_name=NA12877_ch_T0001404;gene_name=BCORP1;ID=intron:NA12877_ch_T0001404:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001404;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001404;transcript_name=NA12877_ch_T0001404;gene_name=BCORP1;ID=exon:NA12877_ch_T0001404:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20158026	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001404;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001404;transcript_name=NA12877_ch_T0001404;gene_name=BCORP1;ID=intron:NA12877_ch_T0001404:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001404;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001404;transcript_name=NA12877_ch_T0001404;gene_name=BCORP1;ID=exon:NA12877_ch_T0001404:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166963	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001404;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001404;transcript_name=NA12877_ch_T0001404;gene_name=BCORP1;ID=intron:NA12877_ch_T0001404:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166964	20166994	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001404;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001404;transcript_name=NA12877_ch_T0001404;gene_name=BCORP1;ID=exon:NA12877_ch_T0001404:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167031	1000	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001405;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001405;gene_name=BCORP1;ID=NA12877_ch_T0001405;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20156176	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001405;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001405;transcript_name=NA12877_ch_T0001405;gene_name=BCORP1;ID=exon:NA12877_ch_T0001405:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156177	20157216	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001405;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001405;transcript_name=NA12877_ch_T0001405;gene_name=BCORP1;ID=intron:NA12877_ch_T0001405:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001405;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001405;transcript_name=NA12877_ch_T0001405;gene_name=BCORP1;ID=exon:NA12877_ch_T0001405:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001405;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001405;transcript_name=NA12877_ch_T0001405;gene_name=BCORP1;ID=intron:NA12877_ch_T0001405:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001405;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001405;transcript_name=NA12877_ch_T0001405;gene_name=BCORP1;ID=exon:NA12877_ch_T0001405:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001405;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001405;transcript_name=NA12877_ch_T0001405;gene_name=BCORP1;ID=intron:NA12877_ch_T0001405:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167031	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001405;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001405;transcript_name=NA12877_ch_T0001405;gene_name=BCORP1;ID=exon:NA12877_ch_T0001405:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20166994	1000	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001406;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001406;gene_name=BCORP1;ID=NA12877_ch_T0001406;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001406;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001406;transcript_name=NA12877_ch_T0001406;gene_name=BCORP1;ID=exon:NA12877_ch_T0001406:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001406;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001406;transcript_name=NA12877_ch_T0001406;gene_name=BCORP1;ID=intron:NA12877_ch_T0001406:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001406;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001406;transcript_name=NA12877_ch_T0001406;gene_name=BCORP1;ID=exon:NA12877_ch_T0001406:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001406;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001406;transcript_name=NA12877_ch_T0001406;gene_name=BCORP1;ID=intron:NA12877_ch_T0001406:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001406;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001406;transcript_name=NA12877_ch_T0001406;gene_name=BCORP1;ID=exon:NA12877_ch_T0001406:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001406;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001406;transcript_name=NA12877_ch_T0001406;gene_name=BCORP1;ID=intron:NA12877_ch_T0001406:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159411	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001406;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001406;transcript_name=NA12877_ch_T0001406;gene_name=BCORP1;ID=exon:NA12877_ch_T0001406:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159412	20166968	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001406;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001406;transcript_name=NA12877_ch_T0001406;gene_name=BCORP1;ID=intron:NA12877_ch_T0001406:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166994	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001406;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001406;transcript_name=NA12877_ch_T0001406;gene_name=BCORP1;ID=exon:NA12877_ch_T0001406:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167267	1000	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001407;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001407;gene_name=BCORP1;ID=NA12877_ch_T0001407;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001407;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001407;transcript_name=NA12877_ch_T0001407;gene_name=BCORP1;ID=exon:NA12877_ch_T0001407:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20158010	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001407;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001407;transcript_name=NA12877_ch_T0001407;gene_name=BCORP1;ID=intron:NA12877_ch_T0001407:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001407;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001407;transcript_name=NA12877_ch_T0001407;gene_name=BCORP1;ID=exon:NA12877_ch_T0001407:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20158600	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001407;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001407;transcript_name=NA12877_ch_T0001407;gene_name=BCORP1;ID=intron:NA12877_ch_T0001407:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158601	20158681	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001407;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001407;transcript_name=NA12877_ch_T0001407;gene_name=BCORP1;ID=exon:NA12877_ch_T0001407:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158682	20166968	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001407;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001407;transcript_name=NA12877_ch_T0001407;gene_name=BCORP1;ID=intron:NA12877_ch_T0001407:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167267	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001407;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001407;transcript_name=NA12877_ch_T0001407;gene_name=BCORP1;ID=exon:NA12877_ch_T0001407:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167074	1000	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001408;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001408;gene_name=BCORP1;ID=NA12877_ch_T0001408;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001408;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001408;transcript_name=NA12877_ch_T0001408;gene_name=BCORP1;ID=exon:NA12877_ch_T0001408:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001408;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001408;transcript_name=NA12877_ch_T0001408;gene_name=BCORP1;ID=intron:NA12877_ch_T0001408:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001408;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001408;transcript_name=NA12877_ch_T0001408;gene_name=BCORP1;ID=exon:NA12877_ch_T0001408:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001408;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001408;transcript_name=NA12877_ch_T0001408;gene_name=BCORP1;ID=intron:NA12877_ch_T0001408:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001408;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001408;transcript_name=NA12877_ch_T0001408;gene_name=BCORP1;ID=exon:NA12877_ch_T0001408:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166963	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001408;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001408;transcript_name=NA12877_ch_T0001408;gene_name=BCORP1;ID=intron:NA12877_ch_T0001408:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166964	20167074	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001408;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001408;transcript_name=NA12877_ch_T0001408;gene_name=BCORP1;ID=exon:NA12877_ch_T0001408:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167026	1000	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001409;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001409;gene_name=BCORP1;ID=NA12877_ch_T0001409;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20156176	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001409;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001409;transcript_name=NA12877_ch_T0001409;gene_name=BCORP1;ID=exon:NA12877_ch_T0001409:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156177	20157216	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001409;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001409;transcript_name=NA12877_ch_T0001409;gene_name=BCORP1;ID=intron:NA12877_ch_T0001409:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001409;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001409;transcript_name=NA12877_ch_T0001409;gene_name=BCORP1;ID=exon:NA12877_ch_T0001409:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001409;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001409;transcript_name=NA12877_ch_T0001409;gene_name=BCORP1;ID=intron:NA12877_ch_T0001409:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001409;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001409;transcript_name=NA12877_ch_T0001409;gene_name=BCORP1;ID=exon:NA12877_ch_T0001409:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001409;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001409;transcript_name=NA12877_ch_T0001409;gene_name=BCORP1;ID=intron:NA12877_ch_T0001409:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167026	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001409;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001409;transcript_name=NA12877_ch_T0001409;gene_name=BCORP1;ID=exon:NA12877_ch_T0001409:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167017	1000	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001410;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001410;gene_name=BCORP1;ID=NA12877_ch_T0001410;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001410;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001410;transcript_name=NA12877_ch_T0001410;gene_name=BCORP1;ID=exon:NA12877_ch_T0001410:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155997	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001410;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001410;transcript_name=NA12877_ch_T0001410;gene_name=BCORP1;ID=intron:NA12877_ch_T0001410:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155998	20156176	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001410;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001410;transcript_name=NA12877_ch_T0001410;gene_name=BCORP1;ID=exon:NA12877_ch_T0001410:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156177	20158010	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001410;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001410;transcript_name=NA12877_ch_T0001410;gene_name=BCORP1;ID=intron:NA12877_ch_T0001410:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001410;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001410;transcript_name=NA12877_ch_T0001410;gene_name=BCORP1;ID=exon:NA12877_ch_T0001410:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001410;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001410;transcript_name=NA12877_ch_T0001410;gene_name=BCORP1;ID=intron:NA12877_ch_T0001410:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167017	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001410;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001410;transcript_name=NA12877_ch_T0001410;gene_name=BCORP1;ID=exon:NA12877_ch_T0001410:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20166996	1000	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001411;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001411;gene_name=BCORP1;ID=NA12877_ch_T0001411;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001411;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001411;transcript_name=NA12877_ch_T0001411;gene_name=BCORP1;ID=exon:NA12877_ch_T0001411:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001411;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001411;transcript_name=NA12877_ch_T0001411;gene_name=BCORP1;ID=intron:NA12877_ch_T0001411:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001411;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001411;transcript_name=NA12877_ch_T0001411;gene_name=BCORP1;ID=exon:NA12877_ch_T0001411:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001411;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001411;transcript_name=NA12877_ch_T0001411;gene_name=BCORP1;ID=intron:NA12877_ch_T0001411:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001411;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001411;transcript_name=NA12877_ch_T0001411;gene_name=BCORP1;ID=exon:NA12877_ch_T0001411:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20158600	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001411;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001411;transcript_name=NA12877_ch_T0001411;gene_name=BCORP1;ID=intron:NA12877_ch_T0001411:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158601	20158675	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001411;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001411;transcript_name=NA12877_ch_T0001411;gene_name=BCORP1;ID=exon:NA12877_ch_T0001411:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158676	20166968	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001411;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001411;transcript_name=NA12877_ch_T0001411;gene_name=BCORP1;ID=intron:NA12877_ch_T0001411:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166996	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001411;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001411;transcript_name=NA12877_ch_T0001411;gene_name=BCORP1;ID=exon:NA12877_ch_T0001411:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20166996	1000	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001412;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001412;gene_name=BCORP1;ID=NA12877_ch_T0001412;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001412;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001412;transcript_name=NA12877_ch_T0001412;gene_name=BCORP1;ID=exon:NA12877_ch_T0001412:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001412;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001412;transcript_name=NA12877_ch_T0001412;gene_name=BCORP1;ID=intron:NA12877_ch_T0001412:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001412;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001412;transcript_name=NA12877_ch_T0001412;gene_name=BCORP1;ID=exon:NA12877_ch_T0001412:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001412;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001412;transcript_name=NA12877_ch_T0001412;gene_name=BCORP1;ID=intron:NA12877_ch_T0001412:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001412;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001412;transcript_name=NA12877_ch_T0001412;gene_name=BCORP1;ID=exon:NA12877_ch_T0001412:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001412;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001412;transcript_name=NA12877_ch_T0001412;gene_name=BCORP1;ID=intron:NA12877_ch_T0001412:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159411	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001412;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001412;transcript_name=NA12877_ch_T0001412;gene_name=BCORP1;ID=exon:NA12877_ch_T0001412:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159412	20166968	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001412;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001412;transcript_name=NA12877_ch_T0001412;gene_name=BCORP1;ID=intron:NA12877_ch_T0001412:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166996	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001412;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001412;transcript_name=NA12877_ch_T0001412;gene_name=BCORP1;ID=exon:NA12877_ch_T0001412:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167257	1000	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001413;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001413;gene_name=BCORP1;ID=NA12877_ch_T0001413;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001413;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001413;transcript_name=NA12877_ch_T0001413;gene_name=BCORP1;ID=exon:NA12877_ch_T0001413:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20158026	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001413;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001413;transcript_name=NA12877_ch_T0001413;gene_name=BCORP1;ID=intron:NA12877_ch_T0001413:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001413;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001413;transcript_name=NA12877_ch_T0001413;gene_name=BCORP1;ID=exon:NA12877_ch_T0001413:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001413;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001413;transcript_name=NA12877_ch_T0001413;gene_name=BCORP1;ID=intron:NA12877_ch_T0001413:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001413;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001413;transcript_name=NA12877_ch_T0001413;gene_name=BCORP1;ID=exon:NA12877_ch_T0001413:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001413;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001413;transcript_name=NA12877_ch_T0001413;gene_name=BCORP1;ID=intron:NA12877_ch_T0001413:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167257	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001413;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001413;transcript_name=NA12877_ch_T0001413;gene_name=BCORP1;ID=exon:NA12877_ch_T0001413:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167031	1000	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001414;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001414;gene_name=BCORP1;ID=NA12877_ch_T0001414;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001414;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001414;transcript_name=NA12877_ch_T0001414;gene_name=BCORP1;ID=exon:NA12877_ch_T0001414:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20158026	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001414;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001414;transcript_name=NA12877_ch_T0001414;gene_name=BCORP1;ID=intron:NA12877_ch_T0001414:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001414;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001414;transcript_name=NA12877_ch_T0001414;gene_name=BCORP1;ID=exon:NA12877_ch_T0001414:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001414;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001414;transcript_name=NA12877_ch_T0001414;gene_name=BCORP1;ID=intron:NA12877_ch_T0001414:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159411	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001414;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001414;transcript_name=NA12877_ch_T0001414;gene_name=BCORP1;ID=exon:NA12877_ch_T0001414:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159412	20166968	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001414;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001414;transcript_name=NA12877_ch_T0001414;gene_name=BCORP1;ID=intron:NA12877_ch_T0001414:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167031	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001414;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001414;transcript_name=NA12877_ch_T0001414;gene_name=BCORP1;ID=exon:NA12877_ch_T0001414:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167002	1000	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001415;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001415;gene_name=BCORP1;ID=NA12877_ch_T0001415;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001415;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001415;transcript_name=NA12877_ch_T0001415;gene_name=BCORP1;ID=exon:NA12877_ch_T0001415:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20158026	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001415;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001415;transcript_name=NA12877_ch_T0001415;gene_name=BCORP1;ID=intron:NA12877_ch_T0001415:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001415;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001415;transcript_name=NA12877_ch_T0001415;gene_name=BCORP1;ID=exon:NA12877_ch_T0001415:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001415;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001415;transcript_name=NA12877_ch_T0001415;gene_name=BCORP1;ID=intron:NA12877_ch_T0001415:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001415;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001415;transcript_name=NA12877_ch_T0001415;gene_name=BCORP1;ID=exon:NA12877_ch_T0001415:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166963	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001415;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001415;transcript_name=NA12877_ch_T0001415;gene_name=BCORP1;ID=intron:NA12877_ch_T0001415:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166964	20167002	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001415;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001415;transcript_name=NA12877_ch_T0001415;gene_name=BCORP1;ID=exon:NA12877_ch_T0001415:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167085	1000	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001416;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001416;gene_name=BCORP1;ID=NA12877_ch_T0001416;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001416;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001416;transcript_name=NA12877_ch_T0001416;gene_name=BCORP1;ID=exon:NA12877_ch_T0001416:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001416;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001416;transcript_name=NA12877_ch_T0001416;gene_name=BCORP1;ID=intron:NA12877_ch_T0001416:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001416;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001416;transcript_name=NA12877_ch_T0001416;gene_name=BCORP1;ID=exon:NA12877_ch_T0001416:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20158026	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001416;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001416;transcript_name=NA12877_ch_T0001416;gene_name=BCORP1;ID=intron:NA12877_ch_T0001416:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001416;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001416;transcript_name=NA12877_ch_T0001416;gene_name=BCORP1;ID=exon:NA12877_ch_T0001416:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001416;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001416;transcript_name=NA12877_ch_T0001416;gene_name=BCORP1;ID=intron:NA12877_ch_T0001416:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167085	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001416;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001416;transcript_name=NA12877_ch_T0001416;gene_name=BCORP1;ID=exon:NA12877_ch_T0001416:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167035	1000	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001417;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001417;gene_name=BCORP1;ID=NA12877_ch_T0001417;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20156799	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001417;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001417;transcript_name=NA12877_ch_T0001417;gene_name=BCORP1;ID=exon:NA12877_ch_T0001417:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156800	20157216	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001417;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001417;transcript_name=NA12877_ch_T0001417;gene_name=BCORP1;ID=intron:NA12877_ch_T0001417:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001417;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001417;transcript_name=NA12877_ch_T0001417;gene_name=BCORP1;ID=exon:NA12877_ch_T0001417:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001417;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001417;transcript_name=NA12877_ch_T0001417;gene_name=BCORP1;ID=intron:NA12877_ch_T0001417:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001417;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001417;transcript_name=NA12877_ch_T0001417;gene_name=BCORP1;ID=exon:NA12877_ch_T0001417:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001417;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001417;transcript_name=NA12877_ch_T0001417;gene_name=BCORP1;ID=intron:NA12877_ch_T0001417:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167035	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001417;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001417;transcript_name=NA12877_ch_T0001417;gene_name=BCORP1;ID=exon:NA12877_ch_T0001417:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167031	1000	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001418;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001418;gene_name=BCORP1;ID=NA12877_ch_T0001418;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001418;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001418;transcript_name=NA12877_ch_T0001418;gene_name=BCORP1;ID=exon:NA12877_ch_T0001418:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001418;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001418;transcript_name=NA12877_ch_T0001418;gene_name=BCORP1;ID=intron:NA12877_ch_T0001418:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001418;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001418;transcript_name=NA12877_ch_T0001418;gene_name=BCORP1;ID=exon:NA12877_ch_T0001418:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001418;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001418;transcript_name=NA12877_ch_T0001418;gene_name=BCORP1;ID=intron:NA12877_ch_T0001418:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001418;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001418;transcript_name=NA12877_ch_T0001418;gene_name=BCORP1;ID=exon:NA12877_ch_T0001418:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001418;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001418;transcript_name=NA12877_ch_T0001418;gene_name=BCORP1;ID=intron:NA12877_ch_T0001418:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001418;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001418;transcript_name=NA12877_ch_T0001418;gene_name=BCORP1;ID=exon:NA12877_ch_T0001418:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001418;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001418;transcript_name=NA12877_ch_T0001418;gene_name=BCORP1;ID=intron:NA12877_ch_T0001418:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167031	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001418;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001418;transcript_name=NA12877_ch_T0001418;gene_name=BCORP1;ID=exon:NA12877_ch_T0001418:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167208	1000	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001419;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001419;gene_name=BCORP1;ID=NA12877_ch_T0001419;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001419;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001419;transcript_name=NA12877_ch_T0001419;gene_name=BCORP1;ID=exon:NA12877_ch_T0001419:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20166968	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001419;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001419;transcript_name=NA12877_ch_T0001419;gene_name=BCORP1;ID=intron:NA12877_ch_T0001419:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167208	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001419;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001419;transcript_name=NA12877_ch_T0001419;gene_name=BCORP1;ID=exon:NA12877_ch_T0001419:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167215	1000	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001420;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001420;gene_name=BCORP1;ID=NA12877_ch_T0001420;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001420;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001420;transcript_name=NA12877_ch_T0001420;gene_name=BCORP1;ID=exon:NA12877_ch_T0001420:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001420;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001420;transcript_name=NA12877_ch_T0001420;gene_name=BCORP1;ID=intron:NA12877_ch_T0001420:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001420;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001420;transcript_name=NA12877_ch_T0001420;gene_name=BCORP1;ID=exon:NA12877_ch_T0001420:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20156042	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001420;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001420;transcript_name=NA12877_ch_T0001420;gene_name=BCORP1;ID=intron:NA12877_ch_T0001420:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20156043	20156176	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001420;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001420;transcript_name=NA12877_ch_T0001420;gene_name=BCORP1;ID=exon:NA12877_ch_T0001420:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156177	20157216	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001420;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001420;transcript_name=NA12877_ch_T0001420;gene_name=BCORP1;ID=intron:NA12877_ch_T0001420:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001420;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001420;transcript_name=NA12877_ch_T0001420;gene_name=BCORP1;ID=exon:NA12877_ch_T0001420:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001420;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001420;transcript_name=NA12877_ch_T0001420;gene_name=BCORP1;ID=intron:NA12877_ch_T0001420:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001420;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001420;transcript_name=NA12877_ch_T0001420;gene_name=BCORP1;ID=exon:NA12877_ch_T0001420:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001420;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001420;transcript_name=NA12877_ch_T0001420;gene_name=BCORP1;ID=intron:NA12877_ch_T0001420:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167215	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001420;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001420;transcript_name=NA12877_ch_T0001420;gene_name=BCORP1;ID=exon:NA12877_ch_T0001420:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167001	1000	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001421;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001421;gene_name=BCORP1;ID=NA12877_ch_T0001421;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001421;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001421;transcript_name=NA12877_ch_T0001421;gene_name=BCORP1;ID=exon:NA12877_ch_T0001421:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001421;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001421;transcript_name=NA12877_ch_T0001421;gene_name=BCORP1;ID=intron:NA12877_ch_T0001421:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001421;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001421;transcript_name=NA12877_ch_T0001421;gene_name=BCORP1;ID=exon:NA12877_ch_T0001421:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001421;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001421;transcript_name=NA12877_ch_T0001421;gene_name=BCORP1;ID=intron:NA12877_ch_T0001421:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001421;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001421;transcript_name=NA12877_ch_T0001421;gene_name=BCORP1;ID=exon:NA12877_ch_T0001421:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20158600	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001421;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001421;transcript_name=NA12877_ch_T0001421;gene_name=BCORP1;ID=intron:NA12877_ch_T0001421:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158601	20158656	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001421;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001421;transcript_name=NA12877_ch_T0001421;gene_name=BCORP1;ID=exon:NA12877_ch_T0001421:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158657	20159326	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001421;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001421;transcript_name=NA12877_ch_T0001421;gene_name=BCORP1;ID=intron:NA12877_ch_T0001421:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001421;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001421;transcript_name=NA12877_ch_T0001421;gene_name=BCORP1;ID=exon:NA12877_ch_T0001421:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001421;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001421;transcript_name=NA12877_ch_T0001421;gene_name=BCORP1;ID=intron:NA12877_ch_T0001421:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167001	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001421;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001421;transcript_name=NA12877_ch_T0001421;gene_name=BCORP1;ID=exon:NA12877_ch_T0001421:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20166996	1000	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001422;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001422;gene_name=BCORP1;ID=NA12877_ch_T0001422;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001422;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001422;transcript_name=NA12877_ch_T0001422;gene_name=BCORP1;ID=exon:NA12877_ch_T0001422:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001422;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001422;transcript_name=NA12877_ch_T0001422;gene_name=BCORP1;ID=intron:NA12877_ch_T0001422:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001422;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001422;transcript_name=NA12877_ch_T0001422;gene_name=BCORP1;ID=exon:NA12877_ch_T0001422:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20158026	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001422;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001422;transcript_name=NA12877_ch_T0001422;gene_name=BCORP1;ID=intron:NA12877_ch_T0001422:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001422;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001422;transcript_name=NA12877_ch_T0001422;gene_name=BCORP1;ID=exon:NA12877_ch_T0001422:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001422;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001422;transcript_name=NA12877_ch_T0001422;gene_name=BCORP1;ID=intron:NA12877_ch_T0001422:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001422;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001422;transcript_name=NA12877_ch_T0001422;gene_name=BCORP1;ID=exon:NA12877_ch_T0001422:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001422;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001422;transcript_name=NA12877_ch_T0001422;gene_name=BCORP1;ID=intron:NA12877_ch_T0001422:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166996	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001422;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001422;transcript_name=NA12877_ch_T0001422;gene_name=BCORP1;ID=exon:NA12877_ch_T0001422:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20166996	1000	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001423;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001423;gene_name=BCORP1;ID=NA12877_ch_T0001423;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001423;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001423;transcript_name=NA12877_ch_T0001423;gene_name=BCORP1;ID=exon:NA12877_ch_T0001423:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001423;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001423;transcript_name=NA12877_ch_T0001423;gene_name=BCORP1;ID=intron:NA12877_ch_T0001423:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001423;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001423;transcript_name=NA12877_ch_T0001423;gene_name=BCORP1;ID=exon:NA12877_ch_T0001423:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001423;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001423;transcript_name=NA12877_ch_T0001423;gene_name=BCORP1;ID=intron:NA12877_ch_T0001423:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001423;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001423;transcript_name=NA12877_ch_T0001423;gene_name=BCORP1;ID=exon:NA12877_ch_T0001423:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20158600	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001423;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001423;transcript_name=NA12877_ch_T0001423;gene_name=BCORP1;ID=intron:NA12877_ch_T0001423:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158601	20158681	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001423;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001423;transcript_name=NA12877_ch_T0001423;gene_name=BCORP1;ID=exon:NA12877_ch_T0001423:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158682	20159326	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001423;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001423;transcript_name=NA12877_ch_T0001423;gene_name=BCORP1;ID=intron:NA12877_ch_T0001423:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001423;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001423;transcript_name=NA12877_ch_T0001423;gene_name=BCORP1;ID=exon:NA12877_ch_T0001423:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001423;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001423;transcript_name=NA12877_ch_T0001423;gene_name=BCORP1;ID=intron:NA12877_ch_T0001423:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166996	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001423;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001423;transcript_name=NA12877_ch_T0001423;gene_name=BCORP1;ID=exon:NA12877_ch_T0001423:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167026	1000	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001424;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001424;gene_name=BCORP1;ID=NA12877_ch_T0001424;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001424;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001424;transcript_name=NA12877_ch_T0001424;gene_name=BCORP1;ID=exon:NA12877_ch_T0001424:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001424;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001424;transcript_name=NA12877_ch_T0001424;gene_name=BCORP1;ID=intron:NA12877_ch_T0001424:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001424;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001424;transcript_name=NA12877_ch_T0001424;gene_name=BCORP1;ID=exon:NA12877_ch_T0001424:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20156042	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001424;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001424;transcript_name=NA12877_ch_T0001424;gene_name=BCORP1;ID=intron:NA12877_ch_T0001424:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20156043	20156176	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001424;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001424;transcript_name=NA12877_ch_T0001424;gene_name=BCORP1;ID=exon:NA12877_ch_T0001424:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156177	20157216	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001424;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001424;transcript_name=NA12877_ch_T0001424;gene_name=BCORP1;ID=intron:NA12877_ch_T0001424:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001424;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001424;transcript_name=NA12877_ch_T0001424;gene_name=BCORP1;ID=exon:NA12877_ch_T0001424:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001424;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001424;transcript_name=NA12877_ch_T0001424;gene_name=BCORP1;ID=intron:NA12877_ch_T0001424:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001424;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001424;transcript_name=NA12877_ch_T0001424;gene_name=BCORP1;ID=exon:NA12877_ch_T0001424:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001424;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001424;transcript_name=NA12877_ch_T0001424;gene_name=BCORP1;ID=intron:NA12877_ch_T0001424:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167026	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001424;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001424;transcript_name=NA12877_ch_T0001424;gene_name=BCORP1;ID=exon:NA12877_ch_T0001424:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167229	1000	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001425;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001425;gene_name=BCORP1;ID=NA12877_ch_T0001425;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001425;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001425;transcript_name=NA12877_ch_T0001425;gene_name=BCORP1;ID=exon:NA12877_ch_T0001425:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20157216	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001425;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001425;transcript_name=NA12877_ch_T0001425;gene_name=BCORP1;ID=intron:NA12877_ch_T0001425:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001425;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001425;transcript_name=NA12877_ch_T0001425;gene_name=BCORP1;ID=exon:NA12877_ch_T0001425:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001425;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001425;transcript_name=NA12877_ch_T0001425;gene_name=BCORP1;ID=intron:NA12877_ch_T0001425:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001425;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001425;transcript_name=NA12877_ch_T0001425;gene_name=BCORP1;ID=exon:NA12877_ch_T0001425:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20158600	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001425;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001425;transcript_name=NA12877_ch_T0001425;gene_name=BCORP1;ID=intron:NA12877_ch_T0001425:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158601	20158681	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001425;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001425;transcript_name=NA12877_ch_T0001425;gene_name=BCORP1;ID=exon:NA12877_ch_T0001425:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158682	20166968	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001425;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001425;transcript_name=NA12877_ch_T0001425;gene_name=BCORP1;ID=intron:NA12877_ch_T0001425:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167229	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001425;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001425;transcript_name=NA12877_ch_T0001425;gene_name=BCORP1;ID=exon:NA12877_ch_T0001425:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20167231	1000	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001426;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001426;gene_name=BCORP1;ID=NA12877_ch_T0001426;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001426;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001426;transcript_name=NA12877_ch_T0001426;gene_name=BCORP1;ID=exon:NA12877_ch_T0001426:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20158026	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001426;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001426;transcript_name=NA12877_ch_T0001426;gene_name=BCORP1;ID=intron:NA12877_ch_T0001426:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001426;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001426;transcript_name=NA12877_ch_T0001426;gene_name=BCORP1;ID=exon:NA12877_ch_T0001426:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20158600	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001426;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001426;transcript_name=NA12877_ch_T0001426;gene_name=BCORP1;ID=intron:NA12877_ch_T0001426:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158601	20158681	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001426;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001426;transcript_name=NA12877_ch_T0001426;gene_name=BCORP1;ID=exon:NA12877_ch_T0001426:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158682	20166968	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001426;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001426;transcript_name=NA12877_ch_T0001426;gene_name=BCORP1;ID=intron:NA12877_ch_T0001426:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167231	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001426;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001426;transcript_name=NA12877_ch_T0001426;gene_name=BCORP1;ID=exon:NA12877_ch_T0001426:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155377	20166994	1000	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001427;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001427;gene_name=BCORP1;ID=NA12877_ch_T0001427;Name=BCORP1
NA12877_chrY	CAT	exon	20155377	20155541	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001427;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001427;transcript_name=NA12877_ch_T0001427;gene_name=BCORP1;ID=exon:NA12877_ch_T0001427:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001427;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001427;transcript_name=NA12877_ch_T0001427;gene_name=BCORP1;ID=intron:NA12877_ch_T0001427:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001427;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001427;transcript_name=NA12877_ch_T0001427;gene_name=BCORP1;ID=exon:NA12877_ch_T0001427:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20158026	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001427;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001427;transcript_name=NA12877_ch_T0001427;gene_name=BCORP1;ID=intron:NA12877_ch_T0001427:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001427;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001427;transcript_name=NA12877_ch_T0001427;gene_name=BCORP1;ID=exon:NA12877_ch_T0001427:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20158600	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001427;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001427;transcript_name=NA12877_ch_T0001427;gene_name=BCORP1;ID=intron:NA12877_ch_T0001427:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158601	20158656	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001427;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001427;transcript_name=NA12877_ch_T0001427;gene_name=BCORP1;ID=exon:NA12877_ch_T0001427:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158657	20166968	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001427;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001427;transcript_name=NA12877_ch_T0001427;gene_name=BCORP1;ID=intron:NA12877_ch_T0001427:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166994	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001427;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001427;transcript_name=NA12877_ch_T0001427;gene_name=BCORP1;ID=exon:NA12877_ch_T0001427:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155380	20167031	1000	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001428;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001428;gene_name=BCORP1;ID=NA12877_ch_T0001428;Name=BCORP1
NA12877_chrY	CAT	exon	20155380	20155541	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001428;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001428;transcript_name=NA12877_ch_T0001428;gene_name=BCORP1;ID=exon:NA12877_ch_T0001428:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155997	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001428;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001428;transcript_name=NA12877_ch_T0001428;gene_name=BCORP1;ID=intron:NA12877_ch_T0001428:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155998	20156096	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001428;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001428;transcript_name=NA12877_ch_T0001428;gene_name=BCORP1;ID=exon:NA12877_ch_T0001428:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156097	20158010	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001428;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001428;transcript_name=NA12877_ch_T0001428;gene_name=BCORP1;ID=intron:NA12877_ch_T0001428:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001428;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001428;transcript_name=NA12877_ch_T0001428;gene_name=BCORP1;ID=exon:NA12877_ch_T0001428:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001428;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001428;transcript_name=NA12877_ch_T0001428;gene_name=BCORP1;ID=intron:NA12877_ch_T0001428:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167031	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001428;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001428;transcript_name=NA12877_ch_T0001428;gene_name=BCORP1;ID=exon:NA12877_ch_T0001428:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155385	20166994	1000	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001429;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001429;gene_name=BCORP1;ID=NA12877_ch_T0001429;Name=BCORP1
NA12877_chrY	CAT	exon	20155385	20155541	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001429;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001429;transcript_name=NA12877_ch_T0001429;gene_name=BCORP1;ID=exon:NA12877_ch_T0001429:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001429;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001429;transcript_name=NA12877_ch_T0001429;gene_name=BCORP1;ID=intron:NA12877_ch_T0001429:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001429;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001429;transcript_name=NA12877_ch_T0001429;gene_name=BCORP1;ID=exon:NA12877_ch_T0001429:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20158010	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001429;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001429;transcript_name=NA12877_ch_T0001429;gene_name=BCORP1;ID=intron:NA12877_ch_T0001429:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001429;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001429;transcript_name=NA12877_ch_T0001429;gene_name=BCORP1;ID=exon:NA12877_ch_T0001429:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001429;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001429;transcript_name=NA12877_ch_T0001429;gene_name=BCORP1;ID=intron:NA12877_ch_T0001429:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001429;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001429;transcript_name=NA12877_ch_T0001429;gene_name=BCORP1;ID=exon:NA12877_ch_T0001429:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001429;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001429;transcript_name=NA12877_ch_T0001429;gene_name=BCORP1;ID=intron:NA12877_ch_T0001429:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166994	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001429;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001429;transcript_name=NA12877_ch_T0001429;gene_name=BCORP1;ID=exon:NA12877_ch_T0001429:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155385	20167022	1000	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001430;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001430;gene_name=BCORP1;ID=NA12877_ch_T0001430;Name=BCORP1
NA12877_chrY	CAT	exon	20155385	20155541	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001430;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001430;transcript_name=NA12877_ch_T0001430;gene_name=BCORP1;ID=exon:NA12877_ch_T0001430:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001430;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001430;transcript_name=NA12877_ch_T0001430;gene_name=BCORP1;ID=intron:NA12877_ch_T0001430:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001430;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001430;transcript_name=NA12877_ch_T0001430;gene_name=BCORP1;ID=exon:NA12877_ch_T0001430:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20157216	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001430;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001430;transcript_name=NA12877_ch_T0001430;gene_name=BCORP1;ID=intron:NA12877_ch_T0001430:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001430;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001430;transcript_name=NA12877_ch_T0001430;gene_name=BCORP1;ID=exon:NA12877_ch_T0001430:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001430;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001430;transcript_name=NA12877_ch_T0001430;gene_name=BCORP1;ID=intron:NA12877_ch_T0001430:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001430;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001430;transcript_name=NA12877_ch_T0001430;gene_name=BCORP1;ID=exon:NA12877_ch_T0001430:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20166968	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001430;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001430;transcript_name=NA12877_ch_T0001430;gene_name=BCORP1;ID=intron:NA12877_ch_T0001430:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167022	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001430;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001430;transcript_name=NA12877_ch_T0001430;gene_name=BCORP1;ID=exon:NA12877_ch_T0001430:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155385	20167223	1000	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001431;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001431;gene_name=BCORP1;ID=NA12877_ch_T0001431;Name=BCORP1
NA12877_chrY	CAT	exon	20155385	20155541	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001431;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001431;transcript_name=NA12877_ch_T0001431;gene_name=BCORP1;ID=exon:NA12877_ch_T0001431:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001431;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001431;transcript_name=NA12877_ch_T0001431;gene_name=BCORP1;ID=intron:NA12877_ch_T0001431:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001431;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001431;transcript_name=NA12877_ch_T0001431;gene_name=BCORP1;ID=exon:NA12877_ch_T0001431:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20158026	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001431;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001431;transcript_name=NA12877_ch_T0001431;gene_name=BCORP1;ID=intron:NA12877_ch_T0001431:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001431;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001431;transcript_name=NA12877_ch_T0001431;gene_name=BCORP1;ID=exon:NA12877_ch_T0001431:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20158600	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001431;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001431;transcript_name=NA12877_ch_T0001431;gene_name=BCORP1;ID=intron:NA12877_ch_T0001431:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158601	20158656	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001431;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001431;transcript_name=NA12877_ch_T0001431;gene_name=BCORP1;ID=exon:NA12877_ch_T0001431:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158657	20159326	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001431;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001431;transcript_name=NA12877_ch_T0001431;gene_name=BCORP1;ID=intron:NA12877_ch_T0001431:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159411	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001431;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001431;transcript_name=NA12877_ch_T0001431;gene_name=BCORP1;ID=exon:NA12877_ch_T0001431:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159412	20166968	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001431;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001431;transcript_name=NA12877_ch_T0001431;gene_name=BCORP1;ID=intron:NA12877_ch_T0001431:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20167223	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001431;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001431;transcript_name=NA12877_ch_T0001431;gene_name=BCORP1;ID=exon:NA12877_ch_T0001431:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155386	20166996	1000	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001432;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001432;gene_name=BCORP1;ID=NA12877_ch_T0001432;Name=BCORP1
NA12877_chrY	CAT	exon	20155386	20155541	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001432;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001432;transcript_name=NA12877_ch_T0001432;gene_name=BCORP1;ID=exon:NA12877_ch_T0001432:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001432;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001432;transcript_name=NA12877_ch_T0001432;gene_name=BCORP1;ID=intron:NA12877_ch_T0001432:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001432;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001432;transcript_name=NA12877_ch_T0001432;gene_name=BCORP1;ID=exon:NA12877_ch_T0001432:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20158026	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001432;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001432;transcript_name=NA12877_ch_T0001432;gene_name=BCORP1;ID=intron:NA12877_ch_T0001432:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001432;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001432;transcript_name=NA12877_ch_T0001432;gene_name=BCORP1;ID=exon:NA12877_ch_T0001432:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20158600	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001432;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001432;transcript_name=NA12877_ch_T0001432;gene_name=BCORP1;ID=intron:NA12877_ch_T0001432:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158601	20158681	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001432;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001432;transcript_name=NA12877_ch_T0001432;gene_name=BCORP1;ID=exon:NA12877_ch_T0001432:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158682	20159326	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001432;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001432;transcript_name=NA12877_ch_T0001432;gene_name=BCORP1;ID=intron:NA12877_ch_T0001432:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001432;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001432;transcript_name=NA12877_ch_T0001432;gene_name=BCORP1;ID=exon:NA12877_ch_T0001432:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001432;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001432;transcript_name=NA12877_ch_T0001432;gene_name=BCORP1;ID=intron:NA12877_ch_T0001432:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166996	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001432;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001432;transcript_name=NA12877_ch_T0001432;gene_name=BCORP1;ID=exon:NA12877_ch_T0001432:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20155388	20159406	1000	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001433;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001433;gene_name=BCORP1;ID=NA12877_ch_T0001433;Name=BCORP1
NA12877_chrY	CAT	exon	20155388	20155541	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001433;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001433;transcript_name=NA12877_ch_T0001433;gene_name=BCORP1;ID=exon:NA12877_ch_T0001433:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155542	20155836	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001433;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001433;transcript_name=NA12877_ch_T0001433;gene_name=BCORP1;ID=intron:NA12877_ch_T0001433:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20155837	20155951	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001433;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001433;transcript_name=NA12877_ch_T0001433;gene_name=BCORP1;ID=exon:NA12877_ch_T0001433:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20155952	20156042	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001433;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001433;transcript_name=NA12877_ch_T0001433;gene_name=BCORP1;ID=intron:NA12877_ch_T0001433:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20156043	20156176	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001433;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001433;transcript_name=NA12877_ch_T0001433;gene_name=BCORP1;ID=exon:NA12877_ch_T0001433:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156177	20157216	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001433;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001433;transcript_name=NA12877_ch_T0001433;gene_name=BCORP1;ID=intron:NA12877_ch_T0001433:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001433;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001433;transcript_name=NA12877_ch_T0001433;gene_name=BCORP1;ID=exon:NA12877_ch_T0001433:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001433;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001433;transcript_name=NA12877_ch_T0001433;gene_name=BCORP1;ID=intron:NA12877_ch_T0001433:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001433;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001433;transcript_name=NA12877_ch_T0001433;gene_name=BCORP1;ID=exon:NA12877_ch_T0001433:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001433;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001433;transcript_name=NA12877_ch_T0001433;gene_name=BCORP1;ID=intron:NA12877_ch_T0001433:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001433;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001433;transcript_name=NA12877_ch_T0001433;gene_name=BCORP1;ID=exon:NA12877_ch_T0001433:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20156337	20166996	1000	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001434;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001434;gene_name=BCORP1;ID=NA12877_ch_T0001434;Name=BCORP1
NA12877_chrY	CAT	exon	20156337	20156799	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001434;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001434;transcript_name=NA12877_ch_T0001434;gene_name=BCORP1;ID=exon:NA12877_ch_T0001434:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156800	20157216	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001434;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001434;transcript_name=NA12877_ch_T0001434;gene_name=BCORP1;ID=intron:NA12877_ch_T0001434:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001434;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001434;transcript_name=NA12877_ch_T0001434;gene_name=BCORP1;ID=exon:NA12877_ch_T0001434:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001434;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001434;transcript_name=NA12877_ch_T0001434;gene_name=BCORP1;ID=intron:NA12877_ch_T0001434:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001434;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001434;transcript_name=NA12877_ch_T0001434;gene_name=BCORP1;ID=exon:NA12877_ch_T0001434:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001434;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001434;transcript_name=NA12877_ch_T0001434;gene_name=BCORP1;ID=intron:NA12877_ch_T0001434:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001434;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001434;transcript_name=NA12877_ch_T0001434;gene_name=BCORP1;ID=exon:NA12877_ch_T0001434:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166968	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001434;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001434;transcript_name=NA12877_ch_T0001434;gene_name=BCORP1;ID=intron:NA12877_ch_T0001434:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166969	20166996	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001434;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001434;transcript_name=NA12877_ch_T0001434;gene_name=BCORP1;ID=exon:NA12877_ch_T0001434:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20156505	20158656	1000	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001435;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001435;gene_name=BCORP1;ID=NA12877_ch_T0001435;Name=BCORP1
NA12877_chrY	CAT	exon	20156505	20156799	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001435;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001435;transcript_name=NA12877_ch_T0001435;gene_name=BCORP1;ID=exon:NA12877_ch_T0001435:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156800	20157216	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001435;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001435;transcript_name=NA12877_ch_T0001435;gene_name=BCORP1;ID=intron:NA12877_ch_T0001435:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001435;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001435;transcript_name=NA12877_ch_T0001435;gene_name=BCORP1;ID=exon:NA12877_ch_T0001435:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158026	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001435;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001435;transcript_name=NA12877_ch_T0001435;gene_name=BCORP1;ID=intron:NA12877_ch_T0001435:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158027	20158127	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001435;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001435;transcript_name=NA12877_ch_T0001435;gene_name=BCORP1;ID=exon:NA12877_ch_T0001435:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20158600	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001435;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001435;transcript_name=NA12877_ch_T0001435;gene_name=BCORP1;ID=intron:NA12877_ch_T0001435:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158601	20158656	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001435;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001435;transcript_name=NA12877_ch_T0001435;gene_name=BCORP1;ID=exon:NA12877_ch_T0001435:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20156648	20166996	1000	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001436;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_G0000469;transcript_name=NA12877_ch_T0001436;gene_name=BCORP1;ID=NA12877_ch_T0001436;Name=BCORP1
NA12877_chrY	CAT	exon	20156648	20156799	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001436;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001436;transcript_name=NA12877_ch_T0001436;gene_name=BCORP1;ID=exon:NA12877_ch_T0001436:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20156800	20157216	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001436;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001436;transcript_name=NA12877_ch_T0001436;gene_name=BCORP1;ID=intron:NA12877_ch_T0001436:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20157217	20157276	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001436;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001436;transcript_name=NA12877_ch_T0001436;gene_name=BCORP1;ID=exon:NA12877_ch_T0001436:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20157277	20158010	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001436;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001436;transcript_name=NA12877_ch_T0001436;gene_name=BCORP1;ID=intron:NA12877_ch_T0001436:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20158011	20158127	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001436;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001436;transcript_name=NA12877_ch_T0001436;gene_name=BCORP1;ID=exon:NA12877_ch_T0001436:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20158128	20159326	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001436;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001436;transcript_name=NA12877_ch_T0001436;gene_name=BCORP1;ID=intron:NA12877_ch_T0001436:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20159327	20159406	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001436;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001436;transcript_name=NA12877_ch_T0001436;gene_name=BCORP1;ID=exon:NA12877_ch_T0001436:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20159407	20166963	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001436;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001436;transcript_name=NA12877_ch_T0001436;gene_name=BCORP1;ID=intron:NA12877_ch_T0001436:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20166964	20166996	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001436;gene_id=NA12877_ch_G0000469;Parent=NA12877_ch_T0001436;transcript_name=NA12877_ch_T0001436;gene_name=BCORP1;ID=exon:NA12877_ch_T0001436:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	20056577	20084871	.	-	.	source_gene_common_name=BCORP1;source_gene=ENSG00000215580.13;gene_id=NA12877_ch_G0000470;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=NA12877_ch_G0000470;Name=BCORP1
NA12877_chrY	CAT	transcript	20056577	20084871	1000	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_G0000470;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=NA12877_ch_T0001374;Name=BCORP1
NA12877_chrY	CAT	exon	20056577	20056856	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=exon:NA12877_ch_T0001374:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20056857	20058910	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=intron:NA12877_ch_T0001374:0;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20058911	20059066	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=exon:NA12877_ch_T0001374:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20059067	20059275	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=intron:NA12877_ch_T0001374:1;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20059276	20059353	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=exon:NA12877_ch_T0001374:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20059354	20059945	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=intron:NA12877_ch_T0001374:2;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20059946	20060091	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=exon:NA12877_ch_T0001374:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20060092	20066442	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=intron:NA12877_ch_T0001374:3;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20066443	20066694	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=exon:NA12877_ch_T0001374:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20066695	20067050	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=intron:NA12877_ch_T0001374:4;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20067051	20067361	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=exon:NA12877_ch_T0001374:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20067362	20073891	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=intron:NA12877_ch_T0001374:5;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20073892	20074237	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=exon:NA12877_ch_T0001374:6;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20074238	20074626	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=intron:NA12877_ch_T0001374:6;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20074627	20074890	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=exon:NA12877_ch_T0001374:7;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20074891	20080151	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=intron:NA12877_ch_T0001374:7;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20080152	20080281	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=exon:NA12877_ch_T0001374:8;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20080282	20080677	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=intron:NA12877_ch_T0001374:8;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20080678	20080725	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=exon:NA12877_ch_T0001374:9;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20080726	20081653	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=intron:NA12877_ch_T0001374:9;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20081654	20084871	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=NA12877_ch_T0001374;gene_id=NA12877_ch_G0000470;Parent=NA12877_ch_T0001374;transcript_name=NA12877_ch_T0001374;gene_name=BCORP1;ID=exon:NA12877_ch_T0001374:10;Name=BCORP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	20167300	20206261	.	+	.	source_gene_common_name=TXLNGY;source_gene=ENSG00000291033.2;gene_id=NA12877_ch_G0000471;gene_biotype=lncRNA;gene_name=TXLNGY;gene_sources=liftoff;ID=NA12877_ch_G0000471;Name=TXLNGY
NA12877_chrY	CAT	transcript	20167300	20190234	1000	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001437;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001437;gene_name=TXLNGY;ID=NA12877_ch_T0001437;Name=TXLNGY
NA12877_chrY	CAT	exon	20167300	20167469	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001437;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001437;transcript_name=NA12877_ch_T0001437;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001437:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001437;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001437;transcript_name=NA12877_ch_T0001437;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001437:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001437;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001437;transcript_name=NA12877_ch_T0001437;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001437:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001437;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001437;transcript_name=NA12877_ch_T0001437;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001437:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20188637	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001437;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001437;transcript_name=NA12877_ch_T0001437;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001437:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189513	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001437;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001437;transcript_name=NA12877_ch_T0001437;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001437:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189514	20189599	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001437;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001437;transcript_name=NA12877_ch_T0001437;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001437:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001437;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001437;transcript_name=NA12877_ch_T0001437;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001437:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190234	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001437;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001437;transcript_name=NA12877_ch_T0001437;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001437:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167300	20194152	1000	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=NA12877_ch_T0001438;Name=TXLNGY
NA12877_chrY	CAT	exon	20167300	20167557	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001438:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001438:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001438:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001438:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20188398	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001438:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188399	20188529	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001438:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188530	20188637	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001438:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189507	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001438:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001438:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20191766	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001438:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20191767	20191946	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001438:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20191947	20193385	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001438:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20194152	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001438;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001438;transcript_name=NA12877_ch_T0001438;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001438:6;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167313	20188146	1000	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001439;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001439;gene_name=TXLNGY;ID=NA12877_ch_T0001439;Name=TXLNGY
NA12877_chrY	CAT	exon	20167313	20167557	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001439;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001439;transcript_name=NA12877_ch_T0001439;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001439:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001439;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001439;transcript_name=NA12877_ch_T0001439;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001439:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20188146	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001439;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001439;transcript_name=NA12877_ch_T0001439;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001439:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167315	20168558	1000	+	.	source_transcript=ENST00000688167.3;source_transcript_name=TXLNGY-217;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000688167.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000688167.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001440;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001440;gene_name=TXLNGY;ID=NA12877_ch_T0001440;Name=TXLNGY
NA12877_chrY	CAT	exon	20167315	20168558	.	+	.	source_transcript=ENST00000688167.3;source_transcript_name=TXLNGY-217;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000688167.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000688167.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001440;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001440;transcript_name=NA12877_ch_T0001440;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001440:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167315	20189834	1000	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001441;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001441;gene_name=TXLNGY;ID=NA12877_ch_T0001441;Name=TXLNGY
NA12877_chrY	CAT	exon	20167315	20167938	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001441;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001441;transcript_name=NA12877_ch_T0001441;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001441:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167939	20187196	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001441;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001441;transcript_name=NA12877_ch_T0001441;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001441:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20189834	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001441;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001441;transcript_name=NA12877_ch_T0001441;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001441:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167316	20190410	1000	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001442;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001442;gene_name=TXLNGY;ID=NA12877_ch_T0001442;Name=TXLNGY
NA12877_chrY	CAT	exon	20167316	20167469	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001442;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001442;transcript_name=NA12877_ch_T0001442;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001442:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001442;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001442;transcript_name=NA12877_ch_T0001442;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001442:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001442;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001442;transcript_name=NA12877_ch_T0001442;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001442:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001442;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001442;transcript_name=NA12877_ch_T0001442;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001442:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20190410	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001442;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001442;transcript_name=NA12877_ch_T0001442;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001442:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167316	20188145	1000	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001443;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001443;gene_name=TXLNGY;ID=NA12877_ch_T0001443;Name=TXLNGY
NA12877_chrY	CAT	exon	20167316	20167469	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001443;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001443;transcript_name=NA12877_ch_T0001443;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001443:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001443;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001443;transcript_name=NA12877_ch_T0001443;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001443:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20188145	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001443;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001443;transcript_name=NA12877_ch_T0001443;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001443:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167316	20190410	1000	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001444;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001444;gene_name=TXLNGY;ID=NA12877_ch_T0001444;Name=TXLNGY
NA12877_chrY	CAT	exon	20167316	20167557	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001444;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001444;transcript_name=NA12877_ch_T0001444;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001444:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001444;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001444;transcript_name=NA12877_ch_T0001444;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001444:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001444;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001444;transcript_name=NA12877_ch_T0001444;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001444:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001444;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001444;transcript_name=NA12877_ch_T0001444;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001444:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20189599	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001444;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001444;transcript_name=NA12877_ch_T0001444;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001444:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001444;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001444;transcript_name=NA12877_ch_T0001444;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001444:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190410	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001444;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001444;transcript_name=NA12877_ch_T0001444;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001444:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167318	20194152	1000	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001445;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001445;gene_name=TXLNGY;ID=NA12877_ch_T0001445;Name=TXLNGY
NA12877_chrY	CAT	exon	20167318	20167557	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001445;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001445;transcript_name=NA12877_ch_T0001445;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001445:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001445;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001445;transcript_name=NA12877_ch_T0001445;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001445:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001445;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001445;transcript_name=NA12877_ch_T0001445;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001445:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001445;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001445;transcript_name=NA12877_ch_T0001445;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001445:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20188398	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001445;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001445;transcript_name=NA12877_ch_T0001445;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001445:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188399	20189507	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001445;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001445;transcript_name=NA12877_ch_T0001445;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001445:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001445;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001445;transcript_name=NA12877_ch_T0001445;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001445:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20191766	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001445;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001445;transcript_name=NA12877_ch_T0001445;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001445:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20191767	20191946	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001445;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001445;transcript_name=NA12877_ch_T0001445;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001445:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20191947	20193385	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001445;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001445;transcript_name=NA12877_ch_T0001445;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001445:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20194152	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001445;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001445;transcript_name=NA12877_ch_T0001445;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001445:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167318	20190406	1000	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001446;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001446;gene_name=TXLNGY;ID=NA12877_ch_T0001446;Name=TXLNGY
NA12877_chrY	CAT	exon	20167318	20167557	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001446;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001446;transcript_name=NA12877_ch_T0001446;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001446:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001446;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001446;transcript_name=NA12877_ch_T0001446;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001446:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001446;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001446;transcript_name=NA12877_ch_T0001446;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001446:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001446;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001446;transcript_name=NA12877_ch_T0001446;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001446:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20190406	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001446;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001446;transcript_name=NA12877_ch_T0001446;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001446:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167321	20189836	1000	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001447;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001447;gene_name=TXLNGY;ID=NA12877_ch_T0001447;Name=TXLNGY
NA12877_chrY	CAT	exon	20167321	20167557	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001447;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001447;transcript_name=NA12877_ch_T0001447;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001447:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20169371	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001447;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001447;transcript_name=NA12877_ch_T0001447;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001447:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20169372	20169446	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001447;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001447;transcript_name=NA12877_ch_T0001447;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001447:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20169447	20187196	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001447;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001447;transcript_name=NA12877_ch_T0001447;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001447:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001447;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001447;transcript_name=NA12877_ch_T0001447;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001447:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001447;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001447;transcript_name=NA12877_ch_T0001447;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001447:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20189836	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001447;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001447;transcript_name=NA12877_ch_T0001447;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001447:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167329	20194148	1000	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001448;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001448;gene_name=TXLNGY;ID=NA12877_ch_T0001448;Name=TXLNGY
NA12877_chrY	CAT	exon	20167329	20167557	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001448;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001448;transcript_name=NA12877_ch_T0001448;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001448:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001448;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001448;transcript_name=NA12877_ch_T0001448;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001448:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001448;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001448;transcript_name=NA12877_ch_T0001448;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001448:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20189507	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001448;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001448;transcript_name=NA12877_ch_T0001448;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001448:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001448;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001448;transcript_name=NA12877_ch_T0001448;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001448:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20193385	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001448;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001448;transcript_name=NA12877_ch_T0001448;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001448:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20194148	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001448;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001448;transcript_name=NA12877_ch_T0001448;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001448:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167334	20190410	1000	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001449;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001449;gene_name=TXLNGY;ID=NA12877_ch_T0001449;Name=TXLNGY
NA12877_chrY	CAT	exon	20167334	20167557	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001449;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001449;transcript_name=NA12877_ch_T0001449;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001449:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001449;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001449;transcript_name=NA12877_ch_T0001449;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001449:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001449;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001449;transcript_name=NA12877_ch_T0001449;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001449:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001449;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001449;transcript_name=NA12877_ch_T0001449;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001449:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20188398	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001449;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001449;transcript_name=NA12877_ch_T0001449;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001449:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188399	20188529	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001449;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001449;transcript_name=NA12877_ch_T0001449;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001449:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188530	20188637	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001449;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001449;transcript_name=NA12877_ch_T0001449;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001449:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189507	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001449;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001449;transcript_name=NA12877_ch_T0001449;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001449:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001449;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001449;transcript_name=NA12877_ch_T0001449;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001449:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001449;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001449;transcript_name=NA12877_ch_T0001449;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001449:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190410	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001449;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001449;transcript_name=NA12877_ch_T0001449;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001449:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167337	20194148	1000	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001450;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001450;gene_name=TXLNGY;ID=NA12877_ch_T0001450;Name=TXLNGY
NA12877_chrY	CAT	exon	20167337	20167469	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001450;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001450;transcript_name=NA12877_ch_T0001450;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001450:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001450;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001450;transcript_name=NA12877_ch_T0001450;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001450:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001450;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001450;transcript_name=NA12877_ch_T0001450;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001450:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188529	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001450;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001450;transcript_name=NA12877_ch_T0001450;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001450:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188530	20188637	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001450;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001450;transcript_name=NA12877_ch_T0001450;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001450:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189507	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001450;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001450;transcript_name=NA12877_ch_T0001450;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001450:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001450;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001450;transcript_name=NA12877_ch_T0001450;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001450:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20191766	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001450;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001450;transcript_name=NA12877_ch_T0001450;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001450:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20191767	20191946	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001450;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001450;transcript_name=NA12877_ch_T0001450;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001450:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20191947	20193385	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001450;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001450;transcript_name=NA12877_ch_T0001450;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001450:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20194148	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001450;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001450;transcript_name=NA12877_ch_T0001450;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001450:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167337	20194148	1000	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=NA12877_ch_T0001451;Name=TXLNGY
NA12877_chrY	CAT	exon	20167337	20167469	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001451:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001451:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001451:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001451:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20188398	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001451:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188399	20188529	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001451:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188530	20188637	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001451:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189507	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001451:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001451:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190596	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001451:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190597	20190759	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001451:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20190760	20191766	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001451:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20191767	20191946	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001451:6;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20191947	20193385	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001451:6;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20194148	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001451;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001451;transcript_name=NA12877_ch_T0001451;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001451:7;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167337	20190410	1000	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001452;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001452;gene_name=TXLNGY;ID=NA12877_ch_T0001452;Name=TXLNGY
NA12877_chrY	CAT	exon	20167337	20167557	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001452;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001452;transcript_name=NA12877_ch_T0001452;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001452:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001452;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001452;transcript_name=NA12877_ch_T0001452;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001452:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001452;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001452;transcript_name=NA12877_ch_T0001452;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001452:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20189507	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001452;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001452;transcript_name=NA12877_ch_T0001452;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001452:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001452;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001452;transcript_name=NA12877_ch_T0001452;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001452:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001452;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001452;transcript_name=NA12877_ch_T0001452;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001452:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190410	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001452;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001452;transcript_name=NA12877_ch_T0001452;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001452:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167337	20190410	1000	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001453;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001453;gene_name=TXLNGY;ID=NA12877_ch_T0001453;Name=TXLNGY
NA12877_chrY	CAT	exon	20167337	20167469	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001453;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001453;transcript_name=NA12877_ch_T0001453;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001453:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001453;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001453;transcript_name=NA12877_ch_T0001453;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001453:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001453;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001453;transcript_name=NA12877_ch_T0001453;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001453:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20189507	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001453;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001453;transcript_name=NA12877_ch_T0001453;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001453:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001453;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001453;transcript_name=NA12877_ch_T0001453;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001453:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001453;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001453;transcript_name=NA12877_ch_T0001453;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001453:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190410	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001453;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001453;transcript_name=NA12877_ch_T0001453;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001453:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167337	20190263	1000	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001454;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001454;gene_name=TXLNGY;ID=NA12877_ch_T0001454;Name=TXLNGY
NA12877_chrY	CAT	exon	20167337	20167557	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001454;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001454;transcript_name=NA12877_ch_T0001454;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001454:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20168860	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001454;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001454;transcript_name=NA12877_ch_T0001454;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001454:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20168861	20168906	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001454;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001454;transcript_name=NA12877_ch_T0001454;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001454:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20168907	20187196	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001454;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001454;transcript_name=NA12877_ch_T0001454;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001454:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001454;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001454;transcript_name=NA12877_ch_T0001454;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001454:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20189507	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001454;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001454;transcript_name=NA12877_ch_T0001454;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001454:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001454;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001454;transcript_name=NA12877_ch_T0001454;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001454:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001454;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001454;transcript_name=NA12877_ch_T0001454;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001454:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190263	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001454;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001454;transcript_name=NA12877_ch_T0001454;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001454:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167337	20190410	1000	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001455;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001455;gene_name=TXLNGY;ID=NA12877_ch_T0001455;Name=TXLNGY
NA12877_chrY	CAT	exon	20167337	20167557	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001455;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001455;transcript_name=NA12877_ch_T0001455;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001455:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001455;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001455;transcript_name=NA12877_ch_T0001455;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001455:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001455;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001455;transcript_name=NA12877_ch_T0001455;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001455:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188529	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001455;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001455;transcript_name=NA12877_ch_T0001455;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001455:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188530	20188637	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001455;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001455;transcript_name=NA12877_ch_T0001455;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001455:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189507	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001455;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001455;transcript_name=NA12877_ch_T0001455;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001455:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001455;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001455;transcript_name=NA12877_ch_T0001455;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001455:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001455;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001455;transcript_name=NA12877_ch_T0001455;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001455:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190410	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001455;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001455;transcript_name=NA12877_ch_T0001455;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001455:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167337	20194145	1000	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=NA12877_ch_T0001456;Name=TXLNGY
NA12877_chrY	CAT	exon	20167337	20167469	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001456:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001456:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001456:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001456:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20188398	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001456:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188399	20188529	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001456:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188530	20188637	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001456:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189507	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001456:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001456:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20191766	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001456:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20191767	20191946	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001456:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20191947	20193385	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001456:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20194145	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001456;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001456;transcript_name=NA12877_ch_T0001456;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001456:6;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167339	20190410	1000	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001457;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001457;gene_name=TXLNGY;ID=NA12877_ch_T0001457;Name=TXLNGY
NA12877_chrY	CAT	exon	20167339	20167557	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001457;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001457;transcript_name=NA12877_ch_T0001457;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001457:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001457;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001457;transcript_name=NA12877_ch_T0001457;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001457:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001457;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001457;transcript_name=NA12877_ch_T0001457;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001457:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20190069	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001457;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001457;transcript_name=NA12877_ch_T0001457;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001457:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190410	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001457;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001457;transcript_name=NA12877_ch_T0001457;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001457:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167339	20190406	1000	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001458;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001458;gene_name=TXLNGY;ID=NA12877_ch_T0001458;Name=TXLNGY
NA12877_chrY	CAT	exon	20167339	20167557	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001458;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001458;transcript_name=NA12877_ch_T0001458;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001458:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187207	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001458;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001458;transcript_name=NA12877_ch_T0001458;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001458:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187208	20187494	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001458;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001458;transcript_name=NA12877_ch_T0001458;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001458:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188529	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001458;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001458;transcript_name=NA12877_ch_T0001458;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001458:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188530	20188637	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001458;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001458;transcript_name=NA12877_ch_T0001458;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001458:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189507	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001458;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001458;transcript_name=NA12877_ch_T0001458;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001458:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001458;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001458;transcript_name=NA12877_ch_T0001458;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001458:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001458;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001458;transcript_name=NA12877_ch_T0001458;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001458:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190406	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001458;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001458;transcript_name=NA12877_ch_T0001458;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001458:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167342	20194148	1000	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001459;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001459;gene_name=TXLNGY;ID=NA12877_ch_T0001459;Name=TXLNGY
NA12877_chrY	CAT	exon	20167342	20167469	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001459;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001459;transcript_name=NA12877_ch_T0001459;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001459:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001459;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001459;transcript_name=NA12877_ch_T0001459;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001459:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187379	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001459;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001459;transcript_name=NA12877_ch_T0001459;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001459:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187380	20189507	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001459;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001459;transcript_name=NA12877_ch_T0001459;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001459:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001459;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001459;transcript_name=NA12877_ch_T0001459;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001459:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20191766	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001459;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001459;transcript_name=NA12877_ch_T0001459;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001459:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20191767	20191946	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001459;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001459;transcript_name=NA12877_ch_T0001459;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001459:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20191947	20193385	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001459;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001459;transcript_name=NA12877_ch_T0001459;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001459:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20194148	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001459;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001459;transcript_name=NA12877_ch_T0001459;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001459:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167343	20190410	1000	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001460;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001460;gene_name=TXLNGY;ID=NA12877_ch_T0001460;Name=TXLNGY
NA12877_chrY	CAT	exon	20167343	20167469	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001460;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001460;transcript_name=NA12877_ch_T0001460;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001460:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001460;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001460;transcript_name=NA12877_ch_T0001460;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001460:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001460;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001460;transcript_name=NA12877_ch_T0001460;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001460:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001460;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001460;transcript_name=NA12877_ch_T0001460;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001460:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20188398	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001460;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001460;transcript_name=NA12877_ch_T0001460;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001460:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188399	20188529	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001460;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001460;transcript_name=NA12877_ch_T0001460;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001460:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188530	20188637	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001460;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001460;transcript_name=NA12877_ch_T0001460;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001460:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189507	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001460;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001460;transcript_name=NA12877_ch_T0001460;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001460:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001460;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001460;transcript_name=NA12877_ch_T0001460;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001460:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001460;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001460;transcript_name=NA12877_ch_T0001460;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001460:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190410	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001460;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001460;transcript_name=NA12877_ch_T0001460;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001460:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167345	20188145	1000	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001461;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001461;gene_name=TXLNGY;ID=NA12877_ch_T0001461;Name=TXLNGY
NA12877_chrY	CAT	exon	20167345	20167557	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001461;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001461;transcript_name=NA12877_ch_T0001461;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001461:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187207	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001461;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001461;transcript_name=NA12877_ch_T0001461;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001461:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187208	20188145	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001461;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001461;transcript_name=NA12877_ch_T0001461;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001461:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167350	20194142	1000	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001462;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001462;gene_name=TXLNGY;ID=NA12877_ch_T0001462;Name=TXLNGY
NA12877_chrY	CAT	exon	20167350	20167469	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001462;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001462;transcript_name=NA12877_ch_T0001462;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001462:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001462;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001462;transcript_name=NA12877_ch_T0001462;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001462:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001462;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001462;transcript_name=NA12877_ch_T0001462;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001462:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001462;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001462;transcript_name=NA12877_ch_T0001462;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001462:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20188398	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001462;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001462;transcript_name=NA12877_ch_T0001462;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001462:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188399	20188529	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001462;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001462;transcript_name=NA12877_ch_T0001462;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001462:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188530	20188637	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001462;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001462;transcript_name=NA12877_ch_T0001462;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001462:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189507	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001462;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001462;transcript_name=NA12877_ch_T0001462;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001462:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001462;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001462;transcript_name=NA12877_ch_T0001462;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001462:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20193385	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001462;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001462;transcript_name=NA12877_ch_T0001462;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001462:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20194142	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001462;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001462;transcript_name=NA12877_ch_T0001462;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001462:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167353	20188145	1000	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001463;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001463;gene_name=TXLNGY;ID=NA12877_ch_T0001463;Name=TXLNGY
NA12877_chrY	CAT	exon	20167353	20167557	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001463;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001463;transcript_name=NA12877_ch_T0001463;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001463:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20176691	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001463;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001463;transcript_name=NA12877_ch_T0001463;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001463:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20176692	20176809	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001463;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001463;transcript_name=NA12877_ch_T0001463;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001463:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20176810	20187196	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001463;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001463;transcript_name=NA12877_ch_T0001463;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001463:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20188145	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001463;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001463;transcript_name=NA12877_ch_T0001463;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001463:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167353	20194145	1000	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001464;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001464;gene_name=TXLNGY;ID=NA12877_ch_T0001464;Name=TXLNGY
NA12877_chrY	CAT	exon	20167353	20167469	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001464;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001464;transcript_name=NA12877_ch_T0001464;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001464:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001464;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001464;transcript_name=NA12877_ch_T0001464;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001464:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001464;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001464;transcript_name=NA12877_ch_T0001464;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001464:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20189507	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001464;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001464;transcript_name=NA12877_ch_T0001464;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001464:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001464;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001464;transcript_name=NA12877_ch_T0001464;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001464:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20191766	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001464;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001464;transcript_name=NA12877_ch_T0001464;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001464:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20191767	20191946	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001464;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001464;transcript_name=NA12877_ch_T0001464;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001464:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20191947	20193385	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001464;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001464;transcript_name=NA12877_ch_T0001464;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001464:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20194145	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001464;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001464;transcript_name=NA12877_ch_T0001464;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001464:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167355	20190410	1000	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001465;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001465;gene_name=TXLNGY;ID=NA12877_ch_T0001465;Name=TXLNGY
NA12877_chrY	CAT	exon	20167355	20167469	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001465;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001465;transcript_name=NA12877_ch_T0001465;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001465:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001465;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001465;transcript_name=NA12877_ch_T0001465;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001465:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001465;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001465;transcript_name=NA12877_ch_T0001465;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001465:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001465;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001465;transcript_name=NA12877_ch_T0001465;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001465:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20189599	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001465;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001465;transcript_name=NA12877_ch_T0001465;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001465:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001465;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001465;transcript_name=NA12877_ch_T0001465;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001465:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190410	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001465;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001465;transcript_name=NA12877_ch_T0001465;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001465:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167359	20190410	1000	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001466;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001466;gene_name=TXLNGY;ID=NA12877_ch_T0001466;Name=TXLNGY
NA12877_chrY	CAT	exon	20167359	20167469	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001466;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001466;transcript_name=NA12877_ch_T0001466;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001466:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001466;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001466;transcript_name=NA12877_ch_T0001466;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001466:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001466;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001466;transcript_name=NA12877_ch_T0001466;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001466:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001466;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001466;transcript_name=NA12877_ch_T0001466;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001466:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20189376	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001466;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001466;transcript_name=NA12877_ch_T0001466;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001466:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189377	20189507	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001466;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001466;transcript_name=NA12877_ch_T0001466;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001466:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001466;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001466;transcript_name=NA12877_ch_T0001466;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001466:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001466;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001466;transcript_name=NA12877_ch_T0001466;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001466:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190410	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001466;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001466;transcript_name=NA12877_ch_T0001466;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001466:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167359	20169428	1000	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001467;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001467;gene_name=TXLNGY;ID=NA12877_ch_T0001467;Name=TXLNGY
NA12877_chrY	CAT	exon	20167359	20167557	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001467;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001467;transcript_name=NA12877_ch_T0001467;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001467:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20167827	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001467;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001467;transcript_name=NA12877_ch_T0001467;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001467:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20167828	20167938	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001467;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001467;transcript_name=NA12877_ch_T0001467;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001467:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167939	20169371	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001467;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001467;transcript_name=NA12877_ch_T0001467;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001467:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20169372	20169428	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001467;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001467;transcript_name=NA12877_ch_T0001467;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001467:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167363	20194153	1000	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001468;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001468;gene_name=TXLNGY;ID=NA12877_ch_T0001468;Name=TXLNGY
NA12877_chrY	CAT	exon	20167363	20167557	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001468;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001468;transcript_name=NA12877_ch_T0001468;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001468:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001468;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001468;transcript_name=NA12877_ch_T0001468;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001468:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001468;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001468;transcript_name=NA12877_ch_T0001468;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001468:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20189507	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001468;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001468;transcript_name=NA12877_ch_T0001468;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001468:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001468;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001468;transcript_name=NA12877_ch_T0001468;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001468:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20191766	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001468;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001468;transcript_name=NA12877_ch_T0001468;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001468:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20191767	20191946	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001468;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001468;transcript_name=NA12877_ch_T0001468;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001468:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20191947	20193385	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001468;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001468;transcript_name=NA12877_ch_T0001468;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001468:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20194153	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001468;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001468;transcript_name=NA12877_ch_T0001468;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001468:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167364	20189836	1000	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001469;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001469;gene_name=TXLNGY;ID=NA12877_ch_T0001469;Name=TXLNGY
NA12877_chrY	CAT	exon	20167364	20167557	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001469;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001469;transcript_name=NA12877_ch_T0001469;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001469:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20176691	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001469;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001469;transcript_name=NA12877_ch_T0001469;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001469:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20176692	20176809	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001469;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001469;transcript_name=NA12877_ch_T0001469;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001469:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20176810	20187196	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001469;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001469;transcript_name=NA12877_ch_T0001469;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001469:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001469;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001469;transcript_name=NA12877_ch_T0001469;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001469:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001469;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001469;transcript_name=NA12877_ch_T0001469;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001469:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20189836	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001469;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001469;transcript_name=NA12877_ch_T0001469;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001469:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167365	20190711	1000	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001470;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001470;gene_name=TXLNGY;ID=NA12877_ch_T0001470;Name=TXLNGY
NA12877_chrY	CAT	exon	20167365	20167557	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001470;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001470;transcript_name=NA12877_ch_T0001470;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001470:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001470;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001470;transcript_name=NA12877_ch_T0001470;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001470:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001470;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001470;transcript_name=NA12877_ch_T0001470;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001470:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20189507	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001470;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001470;transcript_name=NA12877_ch_T0001470;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001470:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001470;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001470;transcript_name=NA12877_ch_T0001470;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001470:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190596	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001470;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001470;transcript_name=NA12877_ch_T0001470;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001470:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190597	20190711	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001470;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001470;transcript_name=NA12877_ch_T0001470;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001470:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167367	20194148	1000	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001471;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001471;gene_name=TXLNGY;ID=NA12877_ch_T0001471;Name=TXLNGY
NA12877_chrY	CAT	exon	20167367	20167557	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001471;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001471;transcript_name=NA12877_ch_T0001471;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001471:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001471;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001471;transcript_name=NA12877_ch_T0001471;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001471:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001471;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001471;transcript_name=NA12877_ch_T0001471;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001471:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20193385	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001471;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001471;transcript_name=NA12877_ch_T0001471;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001471:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20194148	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001471;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001471;transcript_name=NA12877_ch_T0001471;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001471:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167381	20190277	1000	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001473;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001473;gene_name=TXLNGY;ID=NA12877_ch_T0001473;Name=TXLNGY
NA12877_chrY	CAT	exon	20167381	20167557	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001473;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001473;transcript_name=NA12877_ch_T0001473;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001473:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167558	20187196	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001473;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001473;transcript_name=NA12877_ch_T0001473;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001473:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001473;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001473;transcript_name=NA12877_ch_T0001473;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001473:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001473;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001473;transcript_name=NA12877_ch_T0001473;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001473:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20188398	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001473;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001473;transcript_name=NA12877_ch_T0001473;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001473:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188399	20189507	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001473;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001473;transcript_name=NA12877_ch_T0001473;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001473:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001473;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001473;transcript_name=NA12877_ch_T0001473;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001473:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001473;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001473;transcript_name=NA12877_ch_T0001473;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001473:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190277	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001473;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001473;transcript_name=NA12877_ch_T0001473;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001473:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167573	20190277	1000	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001474;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001474;gene_name=TXLNGY;ID=NA12877_ch_T0001474;Name=TXLNGY
NA12877_chrY	CAT	exon	20167573	20167938	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001474;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001474;transcript_name=NA12877_ch_T0001474;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001474:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167939	20187196	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001474;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001474;transcript_name=NA12877_ch_T0001474;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001474:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001474;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001474;transcript_name=NA12877_ch_T0001474;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001474:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20190069	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001474;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001474;transcript_name=NA12877_ch_T0001474;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001474:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190277	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001474;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001474;transcript_name=NA12877_ch_T0001474;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001474:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167774	20189836	1000	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001475;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001475;gene_name=TXLNGY;ID=NA12877_ch_T0001475;Name=TXLNGY
NA12877_chrY	CAT	exon	20167774	20167938	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001475;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001475;transcript_name=NA12877_ch_T0001475;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001475:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167939	20169371	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001475;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001475;transcript_name=NA12877_ch_T0001475;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001475:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20169372	20169446	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001475;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001475;transcript_name=NA12877_ch_T0001475;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001475:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20169447	20187196	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001475;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001475;transcript_name=NA12877_ch_T0001475;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001475:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001475;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001475;transcript_name=NA12877_ch_T0001475;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001475:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001475;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001475;transcript_name=NA12877_ch_T0001475;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001475:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20189836	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001475;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001475;transcript_name=NA12877_ch_T0001475;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001475:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167826	20190410	1000	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001476;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001476;gene_name=TXLNGY;ID=NA12877_ch_T0001476;Name=TXLNGY
NA12877_chrY	CAT	exon	20167826	20167938	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001476;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001476;transcript_name=NA12877_ch_T0001476;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001476:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167939	20176691	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001476;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001476;transcript_name=NA12877_ch_T0001476;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001476:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20176692	20176809	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001476;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001476;transcript_name=NA12877_ch_T0001476;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001476:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20176810	20187196	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001476;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001476;transcript_name=NA12877_ch_T0001476;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001476:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001476;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001476;transcript_name=NA12877_ch_T0001476;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001476:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001476;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001476;transcript_name=NA12877_ch_T0001476;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001476:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20189376	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001476;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001476;transcript_name=NA12877_ch_T0001476;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001476:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189377	20189507	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001476;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001476;transcript_name=NA12877_ch_T0001476;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001476:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001476;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001476;transcript_name=NA12877_ch_T0001476;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001476:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001476;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001476;transcript_name=NA12877_ch_T0001476;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001476:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190410	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001476;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001476;transcript_name=NA12877_ch_T0001476;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001476:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167826	20193409	1000	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001477;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001477;gene_name=TXLNGY;ID=NA12877_ch_T0001477;Name=TXLNGY
NA12877_chrY	CAT	exon	20167826	20167938	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001477;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001477;transcript_name=NA12877_ch_T0001477;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001477:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167939	20187196	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001477;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001477;transcript_name=NA12877_ch_T0001477;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001477:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001477;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001477;transcript_name=NA12877_ch_T0001477;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001477:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20189507	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001477;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001477;transcript_name=NA12877_ch_T0001477;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001477:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001477;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001477;transcript_name=NA12877_ch_T0001477;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001477:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20191766	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001477;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001477;transcript_name=NA12877_ch_T0001477;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001477:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20191767	20191946	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001477;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001477;transcript_name=NA12877_ch_T0001477;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001477:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20191947	20193385	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001477;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001477;transcript_name=NA12877_ch_T0001477;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001477:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20193409	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001477;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001477;transcript_name=NA12877_ch_T0001477;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001477:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167830	20190406	1000	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001478;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001478;gene_name=TXLNGY;ID=NA12877_ch_T0001478;Name=TXLNGY
NA12877_chrY	CAT	exon	20167830	20167938	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001478;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001478;transcript_name=NA12877_ch_T0001478;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001478:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167939	20187196	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001478;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001478;transcript_name=NA12877_ch_T0001478;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001478:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001478;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001478;transcript_name=NA12877_ch_T0001478;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001478:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001478;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001478;transcript_name=NA12877_ch_T0001478;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001478:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20188398	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001478;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001478;transcript_name=NA12877_ch_T0001478;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001478:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188399	20188529	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001478;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001478;transcript_name=NA12877_ch_T0001478;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001478:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188530	20188637	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001478;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001478;transcript_name=NA12877_ch_T0001478;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001478:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189507	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001478;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001478;transcript_name=NA12877_ch_T0001478;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001478:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001478;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001478;transcript_name=NA12877_ch_T0001478;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001478:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001478;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001478;transcript_name=NA12877_ch_T0001478;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001478:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190406	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001478;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001478;transcript_name=NA12877_ch_T0001478;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001478:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167832	20187488	1000	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001479;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001479;gene_name=TXLNGY;ID=NA12877_ch_T0001479;Name=TXLNGY
NA12877_chrY	CAT	exon	20167832	20167938	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001479;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001479;transcript_name=NA12877_ch_T0001479;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001479:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167939	20168749	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001479;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001479;transcript_name=NA12877_ch_T0001479;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001479:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20168750	20168906	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001479;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001479;transcript_name=NA12877_ch_T0001479;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001479:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20168907	20187196	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001479;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001479;transcript_name=NA12877_ch_T0001479;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001479:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187488	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001479;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001479;transcript_name=NA12877_ch_T0001479;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001479:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20167845	20190191	1000	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=NA12877_ch_T0001480;Name=TXLNGY
NA12877_chrY	CAT	exon	20167845	20167938	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001480:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167939	20168860	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001480:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20168861	20168906	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001480:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20168907	20187196	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001480:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001480:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20188356	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001480:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188357	20188398	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001480:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188399	20188529	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001480:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20188530	20188637	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001480:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189507	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001480:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001480:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20190069	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001480:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20190070	20190191	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001480;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001480;transcript_name=NA12877_ch_T0001480;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001480:6;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20188596	20193589	1000	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001481;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001481;gene_name=TXLNGY;ID=NA12877_ch_T0001481;Name=TXLNGY
NA12877_chrY	CAT	exon	20188596	20188637	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001481;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001481;transcript_name=NA12877_ch_T0001481;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001481:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20188638	20189507	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001481;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001481;transcript_name=NA12877_ch_T0001481;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001481:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001481;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001481;transcript_name=NA12877_ch_T0001481;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001481:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20191906	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001481;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001481;transcript_name=NA12877_ch_T0001481;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001481:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20191907	20191946	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001481;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001481;transcript_name=NA12877_ch_T0001481;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001481:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20191947	20193385	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001481;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001481;transcript_name=NA12877_ch_T0001481;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001481:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20193589	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001481;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001481;transcript_name=NA12877_ch_T0001481;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001481:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20190762	20194148	1000	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001482;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001482;gene_name=TXLNGY;ID=NA12877_ch_T0001482;Name=TXLNGY
NA12877_chrY	CAT	exon	20190762	20191946	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001482;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001482;transcript_name=NA12877_ch_T0001482;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001482:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20191947	20193385	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001482;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001482;transcript_name=NA12877_ch_T0001482;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001482:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20194148	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001482;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001482;transcript_name=NA12877_ch_T0001482;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001482:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20192437	20206261	1000	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001483;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001483;gene_name=TXLNGY;ID=NA12877_ch_T0001483;Name=TXLNGY
NA12877_chrY	CAT	exon	20192437	20192801	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001483;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001483;transcript_name=NA12877_ch_T0001483;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001483:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20192802	20193385	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001483;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001483;transcript_name=NA12877_ch_T0001483;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001483:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20197652	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001483;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001483;transcript_name=NA12877_ch_T0001483;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001483:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20197653	20199725	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001483;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001483;transcript_name=NA12877_ch_T0001483;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001483:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20199726	20199818	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001483;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001483;transcript_name=NA12877_ch_T0001483;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001483:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20199819	20202202	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001483;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001483;transcript_name=NA12877_ch_T0001483;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001483:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20202203	20202298	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001483;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001483;transcript_name=NA12877_ch_T0001483;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001483:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20202299	20203783	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001483;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001483;transcript_name=NA12877_ch_T0001483;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001483:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20203784	20206261	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001483;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001483;transcript_name=NA12877_ch_T0001483;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001483:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20193075	20194148	1000	+	.	source_transcript=ENST00000593000.1;source_transcript_name=TXLNGY-214;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000593000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000593000.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001484;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001484;gene_name=TXLNGY;ID=NA12877_ch_T0001484;Name=TXLNGY
NA12877_chrY	CAT	exon	20193075	20194148	.	+	.	source_transcript=ENST00000593000.1;source_transcript_name=TXLNGY-214;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000593000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000593000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001484;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001484;transcript_name=NA12877_ch_T0001484;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001484:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20197344	20204038	1000	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001485;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_G0000471;transcript_name=NA12877_ch_T0001485;gene_name=TXLNGY;ID=NA12877_ch_T0001485;Name=TXLNGY
NA12877_chrY	CAT	exon	20197344	20197652	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001485;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001485;transcript_name=NA12877_ch_T0001485;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001485:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20197653	20198538	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001485;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001485;transcript_name=NA12877_ch_T0001485;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001485:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20198539	20198626	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001485;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001485;transcript_name=NA12877_ch_T0001485;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001485:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20198627	20199725	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001485;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001485;transcript_name=NA12877_ch_T0001485;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001485:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20199726	20199818	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001485;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001485;transcript_name=NA12877_ch_T0001485;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001485:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20199819	20202202	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001485;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001485;transcript_name=NA12877_ch_T0001485;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001485:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20202203	20202298	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001485;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001485;transcript_name=NA12877_ch_T0001485;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001485:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20202299	20203783	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001485;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001485;transcript_name=NA12877_ch_T0001485;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001485:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20203784	20204038	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001485;gene_id=NA12877_ch_G0000471;Parent=NA12877_ch_T0001485;transcript_name=NA12877_ch_T0001485;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001485:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	20167369	20204107	.	+	.	source_gene_common_name=TXLNGY;source_gene=ENSG00000131002.15;gene_id=NA12877_ch_G0000472;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=NA12877_ch_G0000472;Name=TXLNGY
NA12877_chrY	CAT	transcript	20167369	20204107	1000	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_G0000472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=NA12877_ch_T0001472;Name=TXLNGY
NA12877_chrY	CAT	exon	20167369	20167469	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001472:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20167470	20187196	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001472:0;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20187197	20187494	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001472:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20187495	20189507	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001472:1;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20189508	20189599	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001472:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20189600	20191766	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001472:2;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20191767	20191946	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001472:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20191947	20193385	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001472:3;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20193386	20193580	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001472:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20193581	20196001	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001472:4;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20196002	20196121	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001472:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20196122	20197577	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001472:5;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20197578	20197652	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001472:6;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20197653	20199725	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001472:6;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20199726	20199818	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001472:7;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20199819	20202202	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001472:7;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20202203	20202298	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001472:8;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20202299	20203783	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=intron:NA12877_ch_T0001472:8;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20203784	20204107	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=NA12877_ch_T0001472;gene_id=NA12877_ch_G0000472;Parent=NA12877_ch_T0001472;transcript_name=NA12877_ch_T0001472;gene_name=TXLNGY;ID=exon:NA12877_ch_T0001472:9;Name=TXLNGY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	20198175	20198744	.	+	.	source_gene_common_name=ENSG00000267793;source_gene=ENSG00000267793.1;gene_id=NA12877_ch_G0000473;gene_biotype=transcribed_processed_pseudogene;gene_name=ENSG00000267793;gene_sources=liftoff;ID=NA12877_ch_G0000473;Name=ENSG00000267793
NA12877_chrY	CAT	transcript	20198175	20198744	1000	+	.	source_transcript=ENST00000586015.1;source_transcript_name=ENST00000586015;source_gene=ENSG00000267793.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000267793.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000586015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000586015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000267793;transcript_id=NA12877_ch_T0001486;gene_id=NA12877_ch_G0000473;Parent=NA12877_ch_G0000473;transcript_name=NA12877_ch_T0001486;gene_name=ENSG00000267793;ID=NA12877_ch_T0001486;Name=ENSG00000267793
NA12877_chrY	CAT	exon	20198175	20198744	.	+	.	source_transcript=ENST00000586015.1;source_transcript_name=ENST00000586015;source_gene=ENSG00000267793.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000267793.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000586015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000586015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000267793;transcript_id=NA12877_ch_T0001486;gene_id=NA12877_ch_G0000473;Parent=NA12877_ch_T0001486;transcript_name=NA12877_ch_T0001486;gene_name=ENSG00000267793;ID=exon:NA12877_ch_T0001486:0;Name=ENSG00000267793;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	20291926	20294591	.	-	.	source_gene_common_name=ENSG00000260197;source_gene=ENSG00000260197.1;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;gene_id=NA12877_ch_G0000474;gene_biotype=lncRNA;gene_name=ENSG00000260197;gene_sources=liftoff;ID=NA12877_ch_G0000474;Name=ENSG00000260197
NA12877_chrY	CAT	transcript	20291926	20294591	1000	-	.	source_transcript=ENST00000566193.1;source_transcript_name=ENST00000566193;source_gene=ENSG00000260197.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000260197.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000566193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000566193.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000260197;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;transcript_id=NA12877_ch_T0001487;gene_id=NA12877_ch_G0000474;Parent=NA12877_ch_G0000474;transcript_name=NA12877_ch_T0001487;gene_name=ENSG00000260197;ID=NA12877_ch_T0001487;Name=ENSG00000260197
NA12877_chrY	CAT	exon	20291926	20294591	.	-	.	source_transcript=ENST00000566193.1;source_transcript_name=ENST00000566193;source_gene=ENSG00000260197.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000260197.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000566193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000566193.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000260197;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;transcript_id=NA12877_ch_T0001487;gene_id=NA12877_ch_G0000474;Parent=NA12877_ch_T0001487;transcript_name=NA12877_ch_T0001487;gene_name=ENSG00000260197;ID=exon:NA12877_ch_T0001487:0;Name=ENSG00000260197;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	20303850	20344924	.	-	.	source_gene_common_name=KDM5D;source_gene=ENSG00000012817.16;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;gene_id=NA12877_ch_G0000475;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff;ID=NA12877_ch_G0000475;Name=KDM5D
NA12877_chrY	CAT	transcript	20303850	20344711	100	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_G0000475;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=NA12877_ch_T0001488;Name=KDM5D
NA12877_chrY	CAT	exon	20303850	20306330	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20305980	20306330	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	20305980	20305982	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=stop_codon:NA12877_ch_T0001488;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306331	20306425	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20306426	20306625	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20306426	20306625	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306626	20306778	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20306779	20306848	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20306779	20306848	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306849	20307131	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307132	20307731	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20307132	20307731	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20307732	20307918	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307919	20308056	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20307919	20308056	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308057	20308228	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308229	20308408	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20308229	20308408	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308409	20308859	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308860	20308998	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20308860	20308998	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308999	20309435	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20309436	20309794	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20309436	20309794	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20309795	20310360	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20310361	20310457	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20310361	20310457	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20310458	20315336	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315337	20315484	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20315337	20315484	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315485	20315599	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315600	20315724	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20315600	20315724	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315725	20315807	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315808	20315989	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20315808	20315989	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315990	20316263	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316264	20316458	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20316264	20316458	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20316459	20316580	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316581	20316700	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20316581	20316700	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20316701	20320856	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20320857	20321019	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20320857	20321019	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20321020	20321114	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20321115	20321296	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:15;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20321115	20321296	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:15;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20321297	20331756	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:15;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20331757	20331915	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:16;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20331757	20331915	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:16;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20331916	20332030	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:16;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20332031	20332150	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:17;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20332031	20332150	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:17;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20332151	20332568	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:17;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20332569	20332727	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:18;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20332569	20332727	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:18;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20332728	20335336	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:18;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20335337	20335482	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:19;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20335337	20335482	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:19;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20335483	20335605	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:19;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20335606	20335735	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:20;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20335606	20335735	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:20;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20335736	20339512	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:20;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20339513	20339647	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:21;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20339513	20339647	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:21;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20339648	20341302	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:21;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20341303	20341473	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:22;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20341303	20341473	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:22;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20341474	20341719	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:22;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20341720	20341842	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:23;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20341720	20341842	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:23;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20341843	20343146	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:23;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20343147	20343224	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:24;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20343147	20343224	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:24;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20343225	20344369	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:24;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20344370	20344538	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:25;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20344370	20344519	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001488:25;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	20344517	20344519	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=start_codon:NA12877_ch_T0001488;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20344539	20344655	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=intron:NA12877_ch_T0001488:25;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20344656	20344711	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=NA12877_ch_T0001488;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001488;transcript_name=NA12877_ch_T0001488;gene_name=KDM5D;ID=exon:NA12877_ch_T0001488:26;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20303850	20316680	1000	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_G0000475;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=NA12877_ch_T0001489;Name=KDM5D
NA12877_chrY	CAT	exon	20303850	20306330	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=exon:NA12877_ch_T0001489:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306331	20306425	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=intron:NA12877_ch_T0001489:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20306426	20306848	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=exon:NA12877_ch_T0001489:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306849	20307131	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=intron:NA12877_ch_T0001489:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307132	20307731	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=exon:NA12877_ch_T0001489:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20307732	20307918	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=intron:NA12877_ch_T0001489:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307919	20308056	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=exon:NA12877_ch_T0001489:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308057	20308228	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=intron:NA12877_ch_T0001489:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308229	20308408	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=exon:NA12877_ch_T0001489:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308409	20308859	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=intron:NA12877_ch_T0001489:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308860	20308998	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=exon:NA12877_ch_T0001489:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308999	20309435	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=intron:NA12877_ch_T0001489:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20309436	20310245	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=exon:NA12877_ch_T0001489:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20310246	20310360	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=intron:NA12877_ch_T0001489:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20310361	20310457	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=exon:NA12877_ch_T0001489:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20310458	20315568	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=intron:NA12877_ch_T0001489:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315569	20315724	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=exon:NA12877_ch_T0001489:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315725	20315807	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=intron:NA12877_ch_T0001489:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315808	20315989	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=exon:NA12877_ch_T0001489:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315990	20316263	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=intron:NA12877_ch_T0001489:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316264	20316458	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=exon:NA12877_ch_T0001489:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20316459	20316580	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=intron:NA12877_ch_T0001489:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316581	20316680	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=NA12877_ch_T0001489;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001489;transcript_name=NA12877_ch_T0001489;gene_name=KDM5D;ID=exon:NA12877_ch_T0001489:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20305402	20344924	100	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_G0000475;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=NA12877_ch_T0001490;Name=KDM5D
NA12877_chrY	CAT	exon	20305402	20306330	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20305980	20306330	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	20305980	20305982	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=stop_codon:NA12877_ch_T0001490;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306331	20306425	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20306426	20306625	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20306426	20306625	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306626	20306778	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20306779	20306848	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20306779	20306848	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306849	20307131	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307132	20307731	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20307132	20307731	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20307732	20307918	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307919	20308056	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20307919	20308056	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308057	20308228	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308229	20308408	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20308229	20308408	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308409	20308859	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308860	20308998	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20308860	20308998	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308999	20309435	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20309436	20309794	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20309436	20309794	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20309795	20310360	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20310361	20310457	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20310361	20310457	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20310458	20315336	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315337	20315484	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20315337	20315484	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315485	20315599	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315600	20315724	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20315600	20315724	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315725	20315807	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315808	20315989	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20315808	20315989	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315990	20316263	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316264	20316458	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20316264	20316458	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20316459	20316580	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316581	20316700	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20316581	20316700	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20316701	20320856	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20320857	20321019	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20320857	20321019	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20321020	20321114	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20321115	20321296	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:15;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20321115	20321296	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:15;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20321297	20323325	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:15;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20323326	20323418	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:16;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20323326	20323418	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:16;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20323419	20331756	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:16;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20331757	20331915	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:17;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20331757	20331915	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:17;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20331916	20332030	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:17;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20332031	20332150	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:18;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20332031	20332150	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:18;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20332151	20332568	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:18;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20332569	20332727	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:19;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20332569	20332727	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:19;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20332728	20335336	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:19;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20335337	20335482	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:20;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20335337	20335482	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:20;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20335483	20335605	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:20;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20335606	20335735	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:21;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20335606	20335735	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:21;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20335736	20339512	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:21;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20339513	20339647	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:22;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20339513	20339647	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:22;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20339648	20341302	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:22;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20341303	20341473	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:23;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20341303	20341473	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:23;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20341474	20341719	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:23;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20341720	20341842	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:24;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20341720	20341842	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:24;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20341843	20343146	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:24;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20343147	20343224	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:25;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20343147	20343224	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:25;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20343225	20344369	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:25;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20344370	20344538	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:26;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20344370	20344519	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001490:26;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	20344517	20344519	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=start_codon:NA12877_ch_T0001490;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20344539	20344655	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=intron:NA12877_ch_T0001490:26;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20344656	20344924	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=NA12877_ch_T0001490;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001490;transcript_name=NA12877_ch_T0001490;gene_name=KDM5D;ID=exon:NA12877_ch_T0001490:27;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20305405	20344746	100	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_G0000475;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=NA12877_ch_T0001491;Name=KDM5D
NA12877_chrY	CAT	exon	20305405	20306330	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20305980	20306330	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	20305980	20305982	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=stop_codon:NA12877_ch_T0001491;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306331	20306425	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20306426	20306625	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20306426	20306625	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306626	20306778	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20306779	20306848	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20306779	20306848	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306849	20307131	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307132	20307731	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20307132	20307731	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20307732	20307918	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307919	20308056	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20307919	20308056	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308057	20308228	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308229	20308408	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20308229	20308408	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308409	20308859	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308860	20308998	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20308860	20308998	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308999	20309435	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20309436	20309794	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20309436	20309794	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20309795	20310360	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20310361	20310457	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20310361	20310457	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20310458	20315336	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315337	20315484	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20315337	20315484	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315485	20315599	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315600	20315724	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20315600	20315724	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315725	20315807	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315808	20315989	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20315808	20315989	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315990	20316263	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316264	20316458	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20316264	20316458	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20316459	20316580	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316581	20316700	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20316581	20316700	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20316701	20320856	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20320857	20321019	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20320857	20321019	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20321020	20321114	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20321115	20321296	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:15;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20321115	20321296	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:15;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20321297	20331756	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:15;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20331757	20331915	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:16;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20331757	20331915	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:16;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20331916	20332030	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:16;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20332031	20332150	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:17;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20332031	20332150	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:17;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20332151	20332568	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:17;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20332569	20332727	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:18;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20332569	20332727	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:18;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20332728	20335336	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:18;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20335337	20335482	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:19;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20335337	20335482	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:19;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20335483	20335605	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:19;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20335606	20335735	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:20;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20335606	20335735	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:20;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20335736	20339512	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:20;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20339513	20339647	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:21;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20339513	20339647	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:21;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20339648	20341719	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:21;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20341720	20341842	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:22;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20341720	20341842	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:22;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20341843	20343146	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:22;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20343147	20343224	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:23;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20343147	20343224	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:23;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20343225	20344369	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:23;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20344370	20344538	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:24;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20344370	20344519	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001491:24;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	20344517	20344519	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=start_codon:NA12877_ch_T0001491;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20344539	20344655	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=intron:NA12877_ch_T0001491:24;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20344656	20344746	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=NA12877_ch_T0001491;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001491;transcript_name=NA12877_ch_T0001491;gene_name=KDM5D;ID=exon:NA12877_ch_T0001491:25;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20305410	20322452	1000	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_G0000475;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=NA12877_ch_T0001492;Name=KDM5D
NA12877_chrY	CAT	exon	20305410	20306330	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306331	20306425	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20306426	20306848	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306849	20307131	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307132	20307731	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20307732	20307918	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307919	20308056	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308057	20308228	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308229	20308408	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308409	20308859	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308860	20308998	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308999	20309435	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20309436	20309794	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20309795	20310360	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20310361	20310457	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20310458	20315336	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315337	20315484	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315485	20315599	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315600	20315724	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315725	20315807	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315808	20316096	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20316097	20316263	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316264	20316458	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20316459	20316580	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316581	20316700	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20316701	20320856	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20320857	20321019	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20321020	20321114	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=intron:NA12877_ch_T0001492:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20321115	20322452	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=NA12877_ch_T0001492;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001492;transcript_name=NA12877_ch_T0001492;gene_name=KDM5D;ID=exon:NA12877_ch_T0001492:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20306048	20344908	100	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_G0000475;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=NA12877_ch_T0001493;Name=KDM5D
NA12877_chrY	CAT	exon	20306048	20306330	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20306048	20306330	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306331	20306425	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20306426	20306625	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20306426	20306625	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306626	20306778	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20306779	20306848	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20306779	20306848	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20306849	20307131	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307132	20307731	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20307132	20307731	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20307732	20307918	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307919	20308056	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20307919	20308056	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308057	20308228	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308229	20308408	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20308229	20308408	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308409	20308859	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308860	20308998	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20308860	20308998	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308999	20309435	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20309436	20309794	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20309436	20309794	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20309795	20310360	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20310361	20310457	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20310361	20310457	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20310458	20315336	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315337	20315484	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20315337	20315484	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315485	20315599	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315600	20315724	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20315600	20315724	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315725	20315807	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315808	20315989	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20315808	20315989	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315990	20316263	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:11;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316264	20316458	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20316264	20316458	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20316459	20316580	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:12;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316581	20316700	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20316581	20316700	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20316701	20320856	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:13;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20320857	20321019	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20320857	20321019	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20321020	20321114	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:14;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20321115	20321296	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:15;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20321115	20321296	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:15;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20321297	20331756	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:15;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20331757	20331915	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:16;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20331757	20331915	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:16;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20331916	20332030	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:16;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20332031	20332150	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:17;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20332031	20332150	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:17;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20332151	20332568	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:17;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20332569	20332727	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:18;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20332569	20332727	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:18;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20332728	20335336	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:18;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20335337	20335482	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:19;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20335337	20335482	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:19;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20335483	20335605	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:19;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20335606	20335735	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:20;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20335606	20335735	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:20;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20335736	20339512	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:20;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20339513	20339647	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:21;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20339513	20339647	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:21;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20339648	20341302	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:21;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20341303	20341473	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:22;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20341303	20341473	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:22;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20341474	20343146	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:22;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20343147	20343224	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:23;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20343147	20343224	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:23;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20343225	20344369	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:23;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20344370	20344538	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:24;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20344370	20344519	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001493:24;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	20344517	20344519	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=start_codon:NA12877_ch_T0001493;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20344539	20344655	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=intron:NA12877_ch_T0001493:24;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20344656	20344908	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=NA12877_ch_T0001493;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001493;transcript_name=NA12877_ch_T0001493;gene_name=KDM5D;ID=exon:NA12877_ch_T0001493:25;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20307167	20308934	100	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=NA12877_ch_T0001494;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_G0000475;transcript_name=NA12877_ch_T0001494;gene_name=KDM5D;ID=NA12877_ch_T0001494;Name=KDM5D
NA12877_chrY	CAT	exon	20307167	20307731	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=NA12877_ch_T0001494;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001494;transcript_name=NA12877_ch_T0001494;gene_name=KDM5D;ID=exon:NA12877_ch_T0001494:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20307167	20307731	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=NA12877_ch_T0001494;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001494;transcript_name=NA12877_ch_T0001494;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001494:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20307732	20307918	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=NA12877_ch_T0001494;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001494;transcript_name=NA12877_ch_T0001494;gene_name=KDM5D;ID=intron:NA12877_ch_T0001494:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20307919	20308056	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=NA12877_ch_T0001494;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001494;transcript_name=NA12877_ch_T0001494;gene_name=KDM5D;ID=exon:NA12877_ch_T0001494:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20307919	20308056	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=NA12877_ch_T0001494;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001494;transcript_name=NA12877_ch_T0001494;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001494:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308057	20308306	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=NA12877_ch_T0001494;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001494;transcript_name=NA12877_ch_T0001494;gene_name=KDM5D;ID=intron:NA12877_ch_T0001494:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308307	20308408	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=NA12877_ch_T0001494;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001494;transcript_name=NA12877_ch_T0001494;gene_name=KDM5D;ID=exon:NA12877_ch_T0001494:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20308307	20308408	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=NA12877_ch_T0001494;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001494;transcript_name=NA12877_ch_T0001494;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001494:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20308409	20308859	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=NA12877_ch_T0001494;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001494;transcript_name=NA12877_ch_T0001494;gene_name=KDM5D;ID=intron:NA12877_ch_T0001494:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20308860	20308934	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=NA12877_ch_T0001494;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001494;transcript_name=NA12877_ch_T0001494;gene_name=KDM5D;ID=exon:NA12877_ch_T0001494:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20308860	20308934	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=NA12877_ch_T0001494;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001494;transcript_name=NA12877_ch_T0001494;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001494:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20309685	20310591	1000	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=NA12877_ch_T0001495;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_G0000475;transcript_name=NA12877_ch_T0001495;gene_name=KDM5D;ID=NA12877_ch_T0001495;Name=KDM5D
NA12877_chrY	CAT	exon	20309685	20310245	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=NA12877_ch_T0001495;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001495;transcript_name=NA12877_ch_T0001495;gene_name=KDM5D;ID=exon:NA12877_ch_T0001495:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20310246	20310360	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=NA12877_ch_T0001495;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001495;transcript_name=NA12877_ch_T0001495;gene_name=KDM5D;ID=intron:NA12877_ch_T0001495:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20310361	20310591	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=NA12877_ch_T0001495;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001495;transcript_name=NA12877_ch_T0001495;gene_name=KDM5D;ID=exon:NA12877_ch_T0001495:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20315121	20316333	1000	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=NA12877_ch_T0001496;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_G0000475;transcript_name=NA12877_ch_T0001496;gene_name=KDM5D;ID=NA12877_ch_T0001496;Name=KDM5D
NA12877_chrY	CAT	exon	20315121	20315724	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=NA12877_ch_T0001496;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001496;transcript_name=NA12877_ch_T0001496;gene_name=KDM5D;ID=exon:NA12877_ch_T0001496:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315725	20315807	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=NA12877_ch_T0001496;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001496;transcript_name=NA12877_ch_T0001496;gene_name=KDM5D;ID=intron:NA12877_ch_T0001496:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20315808	20315989	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=NA12877_ch_T0001496;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001496;transcript_name=NA12877_ch_T0001496;gene_name=KDM5D;ID=exon:NA12877_ch_T0001496:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20315990	20316263	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=NA12877_ch_T0001496;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001496;transcript_name=NA12877_ch_T0001496;gene_name=KDM5D;ID=intron:NA12877_ch_T0001496:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20316264	20316333	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=NA12877_ch_T0001496;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001496;transcript_name=NA12877_ch_T0001496;gene_name=KDM5D;ID=exon:NA12877_ch_T0001496:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20321257	20344696	100	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_G0000475;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=NA12877_ch_T0001497;Name=KDM5D
NA12877_chrY	CAT	exon	20321257	20321296	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=exon:NA12877_ch_T0001497:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20321257	20321296	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001497:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20321297	20331756	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=intron:NA12877_ch_T0001497:0;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20331757	20331915	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=exon:NA12877_ch_T0001497:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20331757	20331915	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001497:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20331916	20332030	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=intron:NA12877_ch_T0001497:1;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20332031	20332150	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=exon:NA12877_ch_T0001497:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20332031	20332150	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001497:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20332151	20332568	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=intron:NA12877_ch_T0001497:2;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20332569	20332727	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=exon:NA12877_ch_T0001497:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20332569	20332727	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001497:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20332728	20335336	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=intron:NA12877_ch_T0001497:3;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20335337	20335482	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=exon:NA12877_ch_T0001497:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20335337	20335482	.	-	2	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001497:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20335483	20335605	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=intron:NA12877_ch_T0001497:4;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20335606	20335735	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=exon:NA12877_ch_T0001497:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20335606	20335735	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001497:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20335736	20341302	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=intron:NA12877_ch_T0001497:5;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20341303	20341473	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=exon:NA12877_ch_T0001497:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20341303	20341473	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001497:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20341474	20341719	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=intron:NA12877_ch_T0001497:6;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20341720	20341842	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=exon:NA12877_ch_T0001497:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20341720	20341842	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001497:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20341843	20343146	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=intron:NA12877_ch_T0001497:7;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20343147	20343224	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=exon:NA12877_ch_T0001497:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20343147	20343224	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001497:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20343225	20344369	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=intron:NA12877_ch_T0001497:8;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20344370	20344538	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=exon:NA12877_ch_T0001497:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	20344370	20344519	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=CDS:NA12877_ch_T0001497:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	20344517	20344519	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=start_codon:NA12877_ch_T0001497;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20344539	20344655	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=intron:NA12877_ch_T0001497:9;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20344656	20344696	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=NA12877_ch_T0001497;gene_id=NA12877_ch_G0000475;Parent=NA12877_ch_T0001497;transcript_name=NA12877_ch_T0001497;gene_name=KDM5D;ID=exon:NA12877_ch_T0001497:10;Name=KDM5D;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	20344741	20359963	.	+	.	source_gene_common_name=ENSG00000288049;source_gene=ENSG00000288049.2;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;gene_id=NA12877_ch_G0000476;gene_biotype=lncRNA;gene_name=ENSG00000288049;gene_sources=liftoff;ID=NA12877_ch_G0000476;Name=ENSG00000288049
NA12877_chrY	CAT	transcript	20344741	20357327	1000	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=NA12877_ch_T0001498;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_G0000476;transcript_name=NA12877_ch_T0001498;gene_name=ENSG00000288049;ID=NA12877_ch_T0001498;Name=ENSG00000288049
NA12877_chrY	CAT	exon	20344741	20345698	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=NA12877_ch_T0001498;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001498;transcript_name=NA12877_ch_T0001498;gene_name=ENSG00000288049;ID=exon:NA12877_ch_T0001498:0;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20345699	20354610	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=NA12877_ch_T0001498;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001498;transcript_name=NA12877_ch_T0001498;gene_name=ENSG00000288049;ID=intron:NA12877_ch_T0001498:0;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20354611	20354800	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=NA12877_ch_T0001498;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001498;transcript_name=NA12877_ch_T0001498;gene_name=ENSG00000288049;ID=exon:NA12877_ch_T0001498:1;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20354801	20355189	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=NA12877_ch_T0001498;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001498;transcript_name=NA12877_ch_T0001498;gene_name=ENSG00000288049;ID=intron:NA12877_ch_T0001498:1;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20355190	20357327	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=NA12877_ch_T0001498;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001498;transcript_name=NA12877_ch_T0001498;gene_name=ENSG00000288049;ID=exon:NA12877_ch_T0001498:2;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20344937	20359963	1000	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=NA12877_ch_T0001499;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_G0000476;transcript_name=NA12877_ch_T0001499;gene_name=ENSG00000288049;ID=NA12877_ch_T0001499;Name=ENSG00000288049
NA12877_chrY	CAT	exon	20344937	20345698	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=NA12877_ch_T0001499;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001499;transcript_name=NA12877_ch_T0001499;gene_name=ENSG00000288049;ID=exon:NA12877_ch_T0001499:0;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20345699	20354711	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=NA12877_ch_T0001499;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001499;transcript_name=NA12877_ch_T0001499;gene_name=ENSG00000288049;ID=intron:NA12877_ch_T0001499:0;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20354712	20354800	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=NA12877_ch_T0001499;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001499;transcript_name=NA12877_ch_T0001499;gene_name=ENSG00000288049;ID=exon:NA12877_ch_T0001499:1;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20354801	20355189	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=NA12877_ch_T0001499;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001499;transcript_name=NA12877_ch_T0001499;gene_name=ENSG00000288049;ID=intron:NA12877_ch_T0001499:1;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20355190	20359963	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=NA12877_ch_T0001499;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001499;transcript_name=NA12877_ch_T0001499;gene_name=ENSG00000288049;ID=exon:NA12877_ch_T0001499:2;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20344973	20354682	1000	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=NA12877_ch_T0001500;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_G0000476;transcript_name=NA12877_ch_T0001500;gene_name=ENSG00000288049;ID=NA12877_ch_T0001500;Name=ENSG00000288049
NA12877_chrY	CAT	exon	20344973	20345183	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=NA12877_ch_T0001500;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001500;transcript_name=NA12877_ch_T0001500;gene_name=ENSG00000288049;ID=exon:NA12877_ch_T0001500:0;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20345184	20354610	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=NA12877_ch_T0001500;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001500;transcript_name=NA12877_ch_T0001500;gene_name=ENSG00000288049;ID=intron:NA12877_ch_T0001500:0;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20354611	20354682	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=NA12877_ch_T0001500;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001500;transcript_name=NA12877_ch_T0001500;gene_name=ENSG00000288049;ID=exon:NA12877_ch_T0001500:1;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	20344986	20355280	1000	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=NA12877_ch_T0001501;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_G0000476;transcript_name=NA12877_ch_T0001501;gene_name=ENSG00000288049;ID=NA12877_ch_T0001501;Name=ENSG00000288049
NA12877_chrY	CAT	exon	20344986	20345183	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=NA12877_ch_T0001501;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001501;transcript_name=NA12877_ch_T0001501;gene_name=ENSG00000288049;ID=exon:NA12877_ch_T0001501:0;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20345184	20354711	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=NA12877_ch_T0001501;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001501;transcript_name=NA12877_ch_T0001501;gene_name=ENSG00000288049;ID=intron:NA12877_ch_T0001501:0;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20354712	20354800	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=NA12877_ch_T0001501;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001501;transcript_name=NA12877_ch_T0001501;gene_name=ENSG00000288049;ID=exon:NA12877_ch_T0001501:1;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20354801	20355189	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=NA12877_ch_T0001501;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001501;transcript_name=NA12877_ch_T0001501;gene_name=ENSG00000288049;ID=intron:NA12877_ch_T0001501:1;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20355190	20355280	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=NA12877_ch_T0001501;gene_id=NA12877_ch_G0000476;Parent=NA12877_ch_T0001501;transcript_name=NA12877_ch_T0001501;gene_name=ENSG00000288049;ID=exon:NA12877_ch_T0001501:2;Name=ENSG00000288049;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	20468827	20484142	.	+	.	source_gene_common_name=ENSG00000300595;source_gene=ENSG00000300595.1;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;gene_id=NA12877_ch_G0000477;gene_biotype=lncRNA;gene_name=ENSG00000300595;gene_sources=liftoff;ID=NA12877_ch_G0000477;Name=ENSG00000300595
NA12877_chrY	CAT	transcript	20468827	20484142	1000	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=NA12877_ch_T0001502;gene_id=NA12877_ch_G0000477;Parent=NA12877_ch_G0000477;transcript_name=NA12877_ch_T0001502;gene_name=ENSG00000300595;ID=NA12877_ch_T0001502;Name=ENSG00000300595
NA12877_chrY	CAT	exon	20468827	20469088	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=NA12877_ch_T0001502;gene_id=NA12877_ch_G0000477;Parent=NA12877_ch_T0001502;transcript_name=NA12877_ch_T0001502;gene_name=ENSG00000300595;ID=exon:NA12877_ch_T0001502:0;Name=ENSG00000300595;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20469089	20483708	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=NA12877_ch_T0001502;gene_id=NA12877_ch_G0000477;Parent=NA12877_ch_T0001502;transcript_name=NA12877_ch_T0001502;gene_name=ENSG00000300595;ID=intron:NA12877_ch_T0001502:0;Name=ENSG00000300595;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20483709	20484142	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=NA12877_ch_T0001502;gene_id=NA12877_ch_G0000477;Parent=NA12877_ch_T0001502;transcript_name=NA12877_ch_T0001502;gene_name=ENSG00000300595;ID=exon:NA12877_ch_T0001502:1;Name=ENSG00000300595;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	20532118	20532488	.	-	.	source_gene_common_name=ENSG00000274837;source_gene=ENSG00000274837.1;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;gene_id=NA12877_ch_G0000478;gene_biotype=processed_pseudogene;gene_name=ENSG00000274837;gene_sources=liftoff;ID=NA12877_ch_G0000478;Name=ENSG00000274837
NA12877_chrY	CAT	transcript	20532118	20532488	1000	-	.	source_transcript=ENST00000616477.1;source_transcript_name=ENST00000616477;source_gene=ENSG00000274837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616477.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616477.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274837;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;transcript_id=NA12877_ch_T0001503;gene_id=NA12877_ch_G0000478;Parent=NA12877_ch_G0000478;transcript_name=NA12877_ch_T0001503;gene_name=ENSG00000274837;ID=NA12877_ch_T0001503;Name=ENSG00000274837
NA12877_chrY	CAT	exon	20532118	20532488	.	-	.	source_transcript=ENST00000616477.1;source_transcript_name=ENST00000616477;source_gene=ENSG00000274837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616477.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274837;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;transcript_id=NA12877_ch_T0001503;gene_id=NA12877_ch_G0000478;Parent=NA12877_ch_T0001503;transcript_name=NA12877_ch_T0001503;gene_name=ENSG00000274837;ID=exon:NA12877_ch_T0001503:0;Name=ENSG00000274837;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	20586555	20587832	.	-	.	source_gene_common_name=RCC2P2;source_gene=ENSG00000237997.1;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;gene_id=NA12877_ch_G0000479;gene_biotype=processed_pseudogene;gene_name=RCC2P2;gene_sources=liftoff;ID=NA12877_ch_G0000479;Name=RCC2P2
NA12877_chrY	CAT	transcript	20586555	20587832	1000	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=NA12877_ch_T0001504;gene_id=NA12877_ch_G0000479;Parent=NA12877_ch_G0000479;transcript_name=NA12877_ch_T0001504;gene_name=RCC2P2;ID=NA12877_ch_T0001504;Name=RCC2P2
NA12877_chrY	CAT	exon	20586555	20586684	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=NA12877_ch_T0001504;gene_id=NA12877_ch_G0000479;Parent=NA12877_ch_T0001504;transcript_name=NA12877_ch_T0001504;gene_name=RCC2P2;ID=exon:NA12877_ch_T0001504:0;Name=RCC2P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20586685	20587044	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=NA12877_ch_T0001504;gene_id=NA12877_ch_G0000479;Parent=NA12877_ch_T0001504;transcript_name=NA12877_ch_T0001504;gene_name=RCC2P2;ID=intron:NA12877_ch_T0001504:0;Name=RCC2P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20587045	20587832	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=NA12877_ch_T0001504;gene_id=NA12877_ch_G0000479;Parent=NA12877_ch_T0001504;transcript_name=NA12877_ch_T0001504;gene_name=RCC2P2;ID=exon:NA12877_ch_T0001504:1;Name=RCC2P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	20601165	20612185	.	-	.	source_gene_common_name=ZNF886P;source_gene=ENSG00000232522.1;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;gene_id=NA12877_ch_G0000480;gene_biotype=unprocessed_pseudogene;gene_name=ZNF886P;gene_sources=liftoff;ID=NA12877_ch_G0000480;Name=ZNF886P
NA12877_chrY	CAT	transcript	20601165	20612185	1000	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=NA12877_ch_T0001505;gene_id=NA12877_ch_G0000480;Parent=NA12877_ch_G0000480;transcript_name=NA12877_ch_T0001505;gene_name=ZNF886P;ID=NA12877_ch_T0001505;Name=ZNF886P
NA12877_chrY	CAT	exon	20601165	20601679	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=NA12877_ch_T0001505;gene_id=NA12877_ch_G0000480;Parent=NA12877_ch_T0001505;transcript_name=NA12877_ch_T0001505;gene_name=ZNF886P;ID=exon:NA12877_ch_T0001505:0;Name=ZNF886P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20601680	20605719	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=NA12877_ch_T0001505;gene_id=NA12877_ch_G0000480;Parent=NA12877_ch_T0001505;transcript_name=NA12877_ch_T0001505;gene_name=ZNF886P;ID=intron:NA12877_ch_T0001505:0;Name=ZNF886P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20605720	20605808	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=NA12877_ch_T0001505;gene_id=NA12877_ch_G0000480;Parent=NA12877_ch_T0001505;transcript_name=NA12877_ch_T0001505;gene_name=ZNF886P;ID=exon:NA12877_ch_T0001505:1;Name=ZNF886P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	20605809	20612066	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=NA12877_ch_T0001505;gene_id=NA12877_ch_G0000480;Parent=NA12877_ch_T0001505;transcript_name=NA12877_ch_T0001505;gene_name=ZNF886P;ID=intron:NA12877_ch_T0001505:1;Name=ZNF886P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	20612067	20612185	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=NA12877_ch_T0001505;gene_id=NA12877_ch_G0000480;Parent=NA12877_ch_T0001505;transcript_name=NA12877_ch_T0001505;gene_name=ZNF886P;ID=exon:NA12877_ch_T0001505:2;Name=ZNF886P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21093921	21100666	.	+	.	source_gene_common_name=ZNF885P;source_gene=ENSG00000228764.1;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;gene_id=NA12877_ch_G0000481;gene_biotype=processed_pseudogene;gene_name=ZNF885P;gene_sources=liftoff;ID=NA12877_ch_G0000481;Name=ZNF885P
NA12877_chrY	CAT	transcript	21093921	21100666	1000	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=NA12877_ch_T0001506;gene_id=NA12877_ch_G0000481;Parent=NA12877_ch_G0000481;transcript_name=NA12877_ch_T0001506;gene_name=ZNF885P;ID=NA12877_ch_T0001506;Name=ZNF885P
NA12877_chrY	CAT	exon	21093921	21093980	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=NA12877_ch_T0001506;gene_id=NA12877_ch_G0000481;Parent=NA12877_ch_T0001506;transcript_name=NA12877_ch_T0001506;gene_name=ZNF885P;ID=exon:NA12877_ch_T0001506:0;Name=ZNF885P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21093981	21099377	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=NA12877_ch_T0001506;gene_id=NA12877_ch_G0000481;Parent=NA12877_ch_T0001506;transcript_name=NA12877_ch_T0001506;gene_name=ZNF885P;ID=intron:NA12877_ch_T0001506:0;Name=ZNF885P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21099378	21099889	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=NA12877_ch_T0001506;gene_id=NA12877_ch_G0000481;Parent=NA12877_ch_T0001506;transcript_name=NA12877_ch_T0001506;gene_name=ZNF885P;ID=exon:NA12877_ch_T0001506:1;Name=ZNF885P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21099890	21100140	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=NA12877_ch_T0001506;gene_id=NA12877_ch_G0000481;Parent=NA12877_ch_T0001506;transcript_name=NA12877_ch_T0001506;gene_name=ZNF885P;ID=intron:NA12877_ch_T0001506:1;Name=ZNF885P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21100141	21100666	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=NA12877_ch_T0001506;gene_id=NA12877_ch_G0000481;Parent=NA12877_ch_T0001506;transcript_name=NA12877_ch_T0001506;gene_name=ZNF885P;ID=exon:NA12877_ch_T0001506:2;Name=ZNF885P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21168786	21279386	.	-	.	source_gene_common_name=TTTY10;source_gene=ENSG00000229236.4;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;gene_id=NA12877_ch_G0000482;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=NA12877_ch_G0000482;Name=TTTY10
NA12877_chrY	CAT	transcript	21168786	21279364	1000	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=NA12877_ch_T0001507;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001507;gene_name=TTTY10;ID=NA12877_ch_T0001507;Name=TTTY10
NA12877_chrY	CAT	exon	21168786	21169692	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=NA12877_ch_T0001507;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001507;transcript_name=NA12877_ch_T0001507;gene_name=TTTY10;ID=exon:NA12877_ch_T0001507:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21169693	21170297	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=NA12877_ch_T0001507;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001507;transcript_name=NA12877_ch_T0001507;gene_name=TTTY10;ID=intron:NA12877_ch_T0001507:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21170298	21170537	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=NA12877_ch_T0001507;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001507;transcript_name=NA12877_ch_T0001507;gene_name=TTTY10;ID=exon:NA12877_ch_T0001507:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21170538	21172058	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=NA12877_ch_T0001507;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001507;transcript_name=NA12877_ch_T0001507;gene_name=TTTY10;ID=intron:NA12877_ch_T0001507:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21172059	21172118	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=NA12877_ch_T0001507;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001507;transcript_name=NA12877_ch_T0001507;gene_name=TTTY10;ID=exon:NA12877_ch_T0001507:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21172119	21211218	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=NA12877_ch_T0001507;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001507;transcript_name=NA12877_ch_T0001507;gene_name=TTTY10;ID=intron:NA12877_ch_T0001507:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21211219	21211323	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=NA12877_ch_T0001507;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001507;transcript_name=NA12877_ch_T0001507;gene_name=TTTY10;ID=exon:NA12877_ch_T0001507:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21278972	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=NA12877_ch_T0001507;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001507;transcript_name=NA12877_ch_T0001507;gene_name=TTTY10;ID=intron:NA12877_ch_T0001507:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279364	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=NA12877_ch_T0001507;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001507;transcript_name=NA12877_ch_T0001507;gene_name=TTTY10;ID=exon:NA12877_ch_T0001507:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21168786	21279382	1000	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=NA12877_ch_T0001508;Name=TTTY10
NA12877_chrY	CAT	exon	21168786	21169692	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=exon:NA12877_ch_T0001508:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21169693	21170297	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=intron:NA12877_ch_T0001508:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21170298	21170537	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=exon:NA12877_ch_T0001508:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21170538	21172058	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=intron:NA12877_ch_T0001508:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21172059	21172118	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=exon:NA12877_ch_T0001508:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21172119	21173744	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=intron:NA12877_ch_T0001508:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21173745	21173854	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=exon:NA12877_ch_T0001508:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21173855	21211218	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=intron:NA12877_ch_T0001508:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21211219	21211323	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=exon:NA12877_ch_T0001508:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21222137	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=intron:NA12877_ch_T0001508:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222138	21222196	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=exon:NA12877_ch_T0001508:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21222197	21222902	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=intron:NA12877_ch_T0001508:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222903	21223100	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=exon:NA12877_ch_T0001508:6;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21223101	21224998	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=intron:NA12877_ch_T0001508:6;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21224999	21225167	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=exon:NA12877_ch_T0001508:7;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21225168	21228134	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=intron:NA12877_ch_T0001508:7;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21228135	21228307	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=exon:NA12877_ch_T0001508:8;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21228308	21278972	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=intron:NA12877_ch_T0001508:8;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279382	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=NA12877_ch_T0001508;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001508;transcript_name=NA12877_ch_T0001508;gene_name=TTTY10;ID=exon:NA12877_ch_T0001508:9;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21168786	21279364	1000	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=NA12877_ch_T0001509;Name=TTTY10
NA12877_chrY	CAT	exon	21168786	21169692	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=exon:NA12877_ch_T0001509:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21169693	21170297	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=intron:NA12877_ch_T0001509:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21170298	21170537	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=exon:NA12877_ch_T0001509:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21170538	21172058	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=intron:NA12877_ch_T0001509:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21172059	21172118	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=exon:NA12877_ch_T0001509:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21172119	21173744	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=intron:NA12877_ch_T0001509:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21173745	21173854	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=exon:NA12877_ch_T0001509:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21173855	21211218	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=intron:NA12877_ch_T0001509:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21211219	21211323	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=exon:NA12877_ch_T0001509:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21224998	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=intron:NA12877_ch_T0001509:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21224999	21225167	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=exon:NA12877_ch_T0001509:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21225168	21228134	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=intron:NA12877_ch_T0001509:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21228135	21228307	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=exon:NA12877_ch_T0001509:6;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21228308	21278972	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=intron:NA12877_ch_T0001509:6;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279364	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=NA12877_ch_T0001509;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001509;transcript_name=NA12877_ch_T0001509;gene_name=TTTY10;ID=exon:NA12877_ch_T0001509:7;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21168859	21279089	1000	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=NA12877_ch_T0001510;Name=TTTY10
NA12877_chrY	CAT	exon	21168859	21169692	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=exon:NA12877_ch_T0001510:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21169693	21170297	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=intron:NA12877_ch_T0001510:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21170298	21170537	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=exon:NA12877_ch_T0001510:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21170538	21172058	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=intron:NA12877_ch_T0001510:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21172059	21172118	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=exon:NA12877_ch_T0001510:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21172119	21173744	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=intron:NA12877_ch_T0001510:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21173745	21173854	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=exon:NA12877_ch_T0001510:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21173855	21211218	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=intron:NA12877_ch_T0001510:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21211219	21211323	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=exon:NA12877_ch_T0001510:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21222137	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=intron:NA12877_ch_T0001510:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222138	21222196	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=exon:NA12877_ch_T0001510:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21222197	21222902	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=intron:NA12877_ch_T0001510:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222903	21223100	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=exon:NA12877_ch_T0001510:6;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21223101	21224998	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=intron:NA12877_ch_T0001510:6;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21224999	21225167	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=exon:NA12877_ch_T0001510:7;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21225168	21278972	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=intron:NA12877_ch_T0001510:7;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279089	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=NA12877_ch_T0001510;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001510;transcript_name=NA12877_ch_T0001510;gene_name=TTTY10;ID=exon:NA12877_ch_T0001510:8;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21168950	21279123	1000	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=NA12877_ch_T0001511;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001511;gene_name=TTTY10;ID=NA12877_ch_T0001511;Name=TTTY10
NA12877_chrY	CAT	exon	21168950	21169692	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=NA12877_ch_T0001511;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001511;transcript_name=NA12877_ch_T0001511;gene_name=TTTY10;ID=exon:NA12877_ch_T0001511:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21169693	21170297	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=NA12877_ch_T0001511;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001511;transcript_name=NA12877_ch_T0001511;gene_name=TTTY10;ID=intron:NA12877_ch_T0001511:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21170298	21170537	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=NA12877_ch_T0001511;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001511;transcript_name=NA12877_ch_T0001511;gene_name=TTTY10;ID=exon:NA12877_ch_T0001511:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21170538	21172058	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=NA12877_ch_T0001511;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001511;transcript_name=NA12877_ch_T0001511;gene_name=TTTY10;ID=intron:NA12877_ch_T0001511:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21172059	21172118	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=NA12877_ch_T0001511;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001511;transcript_name=NA12877_ch_T0001511;gene_name=TTTY10;ID=exon:NA12877_ch_T0001511:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21172119	21173744	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=NA12877_ch_T0001511;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001511;transcript_name=NA12877_ch_T0001511;gene_name=TTTY10;ID=intron:NA12877_ch_T0001511:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21173745	21173854	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=NA12877_ch_T0001511;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001511;transcript_name=NA12877_ch_T0001511;gene_name=TTTY10;ID=exon:NA12877_ch_T0001511:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21173855	21211218	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=NA12877_ch_T0001511;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001511;transcript_name=NA12877_ch_T0001511;gene_name=TTTY10;ID=intron:NA12877_ch_T0001511:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21211219	21211323	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=NA12877_ch_T0001511;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001511;transcript_name=NA12877_ch_T0001511;gene_name=TTTY10;ID=exon:NA12877_ch_T0001511:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21278972	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=NA12877_ch_T0001511;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001511;transcript_name=NA12877_ch_T0001511;gene_name=TTTY10;ID=intron:NA12877_ch_T0001511:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279123	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=NA12877_ch_T0001511;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001511;transcript_name=NA12877_ch_T0001511;gene_name=TTTY10;ID=exon:NA12877_ch_T0001511:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21169186	21279229	1000	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=NA12877_ch_T0001512;Name=TTTY10
NA12877_chrY	CAT	exon	21169186	21169692	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=exon:NA12877_ch_T0001512:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21169693	21170297	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=intron:NA12877_ch_T0001512:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21170298	21170537	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=exon:NA12877_ch_T0001512:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21170538	21172058	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=intron:NA12877_ch_T0001512:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21172059	21172118	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=exon:NA12877_ch_T0001512:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21172119	21173744	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=intron:NA12877_ch_T0001512:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21173745	21173854	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=exon:NA12877_ch_T0001512:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21173855	21211218	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=intron:NA12877_ch_T0001512:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21211219	21211323	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=exon:NA12877_ch_T0001512:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21222137	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=intron:NA12877_ch_T0001512:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222138	21222196	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=exon:NA12877_ch_T0001512:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21222197	21222754	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=intron:NA12877_ch_T0001512:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222755	21222867	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=exon:NA12877_ch_T0001512:6;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21222868	21224998	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=intron:NA12877_ch_T0001512:6;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21224999	21225167	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=exon:NA12877_ch_T0001512:7;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21225168	21228134	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=intron:NA12877_ch_T0001512:7;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21228135	21228307	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=exon:NA12877_ch_T0001512:8;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21228308	21268934	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=intron:NA12877_ch_T0001512:8;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21268935	21269058	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=exon:NA12877_ch_T0001512:9;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21269059	21278972	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=intron:NA12877_ch_T0001512:9;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279229	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=NA12877_ch_T0001512;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001512;transcript_name=NA12877_ch_T0001512;gene_name=TTTY10;ID=exon:NA12877_ch_T0001512:10;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21169234	21279123	1000	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=NA12877_ch_T0001513;Name=TTTY10
NA12877_chrY	CAT	exon	21169234	21169692	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=exon:NA12877_ch_T0001513:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21169693	21170297	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=intron:NA12877_ch_T0001513:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21170298	21170537	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=exon:NA12877_ch_T0001513:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21170538	21172058	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=intron:NA12877_ch_T0001513:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21172059	21172118	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=exon:NA12877_ch_T0001513:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21172119	21211218	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=intron:NA12877_ch_T0001513:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21211219	21211323	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=exon:NA12877_ch_T0001513:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21224998	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=intron:NA12877_ch_T0001513:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21224999	21225167	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=exon:NA12877_ch_T0001513:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21225168	21228134	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=intron:NA12877_ch_T0001513:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21228135	21228307	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=exon:NA12877_ch_T0001513:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21228308	21278972	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=intron:NA12877_ch_T0001513:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279123	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=NA12877_ch_T0001513;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001513;transcript_name=NA12877_ch_T0001513;gene_name=TTTY10;ID=exon:NA12877_ch_T0001513:6;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21169538	21223095	1000	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=NA12877_ch_T0001514;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001514;gene_name=TTTY10;ID=NA12877_ch_T0001514;Name=TTTY10
NA12877_chrY	CAT	exon	21169538	21169692	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=NA12877_ch_T0001514;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001514;transcript_name=NA12877_ch_T0001514;gene_name=TTTY10;ID=exon:NA12877_ch_T0001514:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21169693	21170297	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=NA12877_ch_T0001514;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001514;transcript_name=NA12877_ch_T0001514;gene_name=TTTY10;ID=intron:NA12877_ch_T0001514:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21170298	21170537	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=NA12877_ch_T0001514;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001514;transcript_name=NA12877_ch_T0001514;gene_name=TTTY10;ID=exon:NA12877_ch_T0001514:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21170538	21172058	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=NA12877_ch_T0001514;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001514;transcript_name=NA12877_ch_T0001514;gene_name=TTTY10;ID=intron:NA12877_ch_T0001514:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21172059	21172118	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=NA12877_ch_T0001514;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001514;transcript_name=NA12877_ch_T0001514;gene_name=TTTY10;ID=exon:NA12877_ch_T0001514:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21172119	21173744	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=NA12877_ch_T0001514;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001514;transcript_name=NA12877_ch_T0001514;gene_name=TTTY10;ID=intron:NA12877_ch_T0001514:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21173745	21173854	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=NA12877_ch_T0001514;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001514;transcript_name=NA12877_ch_T0001514;gene_name=TTTY10;ID=exon:NA12877_ch_T0001514:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21173855	21211218	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=NA12877_ch_T0001514;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001514;transcript_name=NA12877_ch_T0001514;gene_name=TTTY10;ID=intron:NA12877_ch_T0001514:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21211219	21211323	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=NA12877_ch_T0001514;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001514;transcript_name=NA12877_ch_T0001514;gene_name=TTTY10;ID=exon:NA12877_ch_T0001514:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21222137	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=NA12877_ch_T0001514;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001514;transcript_name=NA12877_ch_T0001514;gene_name=TTTY10;ID=intron:NA12877_ch_T0001514:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222138	21223095	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=NA12877_ch_T0001514;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001514;transcript_name=NA12877_ch_T0001514;gene_name=TTTY10;ID=exon:NA12877_ch_T0001514:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21170045	21279358	1000	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=NA12877_ch_T0001515;Name=TTTY10
NA12877_chrY	CAT	exon	21170045	21170537	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=exon:NA12877_ch_T0001515:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21170538	21172058	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=intron:NA12877_ch_T0001515:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21172059	21172118	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=exon:NA12877_ch_T0001515:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21172119	21173744	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=intron:NA12877_ch_T0001515:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21173745	21173854	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=exon:NA12877_ch_T0001515:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21173855	21211218	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=intron:NA12877_ch_T0001515:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21211219	21211323	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=exon:NA12877_ch_T0001515:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21222137	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=intron:NA12877_ch_T0001515:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222138	21222196	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=exon:NA12877_ch_T0001515:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21222197	21222754	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=intron:NA12877_ch_T0001515:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222755	21222867	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=exon:NA12877_ch_T0001515:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21222868	21224998	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=intron:NA12877_ch_T0001515:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21224999	21225167	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=exon:NA12877_ch_T0001515:6;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21225168	21228134	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=intron:NA12877_ch_T0001515:6;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21228135	21228307	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=exon:NA12877_ch_T0001515:7;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21228308	21278972	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=intron:NA12877_ch_T0001515:7;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279358	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=NA12877_ch_T0001515;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001515;transcript_name=NA12877_ch_T0001515;gene_name=TTTY10;ID=exon:NA12877_ch_T0001515:8;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21170362	21175017	1000	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=NA12877_ch_T0001516;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001516;gene_name=TTTY10;ID=NA12877_ch_T0001516;Name=TTTY10
NA12877_chrY	CAT	exon	21170362	21170537	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=NA12877_ch_T0001516;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001516;transcript_name=NA12877_ch_T0001516;gene_name=TTTY10;ID=exon:NA12877_ch_T0001516:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21170538	21172058	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=NA12877_ch_T0001516;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001516;transcript_name=NA12877_ch_T0001516;gene_name=TTTY10;ID=intron:NA12877_ch_T0001516:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21172059	21172118	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=NA12877_ch_T0001516;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001516;transcript_name=NA12877_ch_T0001516;gene_name=TTTY10;ID=exon:NA12877_ch_T0001516:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21172119	21173744	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=NA12877_ch_T0001516;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001516;transcript_name=NA12877_ch_T0001516;gene_name=TTTY10;ID=intron:NA12877_ch_T0001516:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21173745	21173854	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=NA12877_ch_T0001516;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001516;transcript_name=NA12877_ch_T0001516;gene_name=TTTY10;ID=exon:NA12877_ch_T0001516:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21173855	21174633	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=NA12877_ch_T0001516;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001516;transcript_name=NA12877_ch_T0001516;gene_name=TTTY10;ID=intron:NA12877_ch_T0001516:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21174634	21175017	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=NA12877_ch_T0001516;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001516;transcript_name=NA12877_ch_T0001516;gene_name=TTTY10;ID=exon:NA12877_ch_T0001516:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21207076	21279198	1000	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=NA12877_ch_T0001517;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001517;gene_name=TTTY10;ID=NA12877_ch_T0001517;Name=TTTY10
NA12877_chrY	CAT	exon	21207076	21211323	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=NA12877_ch_T0001517;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001517;transcript_name=NA12877_ch_T0001517;gene_name=TTTY10;ID=exon:NA12877_ch_T0001517:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21278972	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=NA12877_ch_T0001517;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001517;transcript_name=NA12877_ch_T0001517;gene_name=TTTY10;ID=intron:NA12877_ch_T0001517:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279198	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=NA12877_ch_T0001517;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001517;transcript_name=NA12877_ch_T0001517;gene_name=TTTY10;ID=exon:NA12877_ch_T0001517:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21208343	21222723	1000	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=NA12877_ch_T0001518;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001518;gene_name=TTTY10;ID=NA12877_ch_T0001518;Name=TTTY10
NA12877_chrY	CAT	exon	21208343	21211323	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=NA12877_ch_T0001518;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001518;transcript_name=NA12877_ch_T0001518;gene_name=TTTY10;ID=exon:NA12877_ch_T0001518:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21222137	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=NA12877_ch_T0001518;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001518;transcript_name=NA12877_ch_T0001518;gene_name=TTTY10;ID=intron:NA12877_ch_T0001518:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222138	21222723	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=NA12877_ch_T0001518;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001518;transcript_name=NA12877_ch_T0001518;gene_name=TTTY10;ID=exon:NA12877_ch_T0001518:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21210634	21279012	1000	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=NA12877_ch_T0001519;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001519;gene_name=TTTY10;ID=NA12877_ch_T0001519;Name=TTTY10
NA12877_chrY	CAT	exon	21210634	21211323	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=NA12877_ch_T0001519;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001519;transcript_name=NA12877_ch_T0001519;gene_name=TTTY10;ID=exon:NA12877_ch_T0001519:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21222902	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=NA12877_ch_T0001519;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001519;transcript_name=NA12877_ch_T0001519;gene_name=TTTY10;ID=intron:NA12877_ch_T0001519:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222903	21223100	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=NA12877_ch_T0001519;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001519;transcript_name=NA12877_ch_T0001519;gene_name=TTTY10;ID=exon:NA12877_ch_T0001519:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21223101	21224998	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=NA12877_ch_T0001519;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001519;transcript_name=NA12877_ch_T0001519;gene_name=TTTY10;ID=intron:NA12877_ch_T0001519:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21224999	21225167	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=NA12877_ch_T0001519;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001519;transcript_name=NA12877_ch_T0001519;gene_name=TTTY10;ID=exon:NA12877_ch_T0001519:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21225168	21228134	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=NA12877_ch_T0001519;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001519;transcript_name=NA12877_ch_T0001519;gene_name=TTTY10;ID=intron:NA12877_ch_T0001519:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21228135	21228307	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=NA12877_ch_T0001519;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001519;transcript_name=NA12877_ch_T0001519;gene_name=TTTY10;ID=exon:NA12877_ch_T0001519:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21228308	21278972	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=NA12877_ch_T0001519;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001519;transcript_name=NA12877_ch_T0001519;gene_name=TTTY10;ID=intron:NA12877_ch_T0001519:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279012	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=NA12877_ch_T0001519;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001519;transcript_name=NA12877_ch_T0001519;gene_name=TTTY10;ID=exon:NA12877_ch_T0001519:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21210636	21279386	1000	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=NA12877_ch_T0001520;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001520;gene_name=TTTY10;ID=NA12877_ch_T0001520;Name=TTTY10
NA12877_chrY	CAT	exon	21210636	21211323	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=NA12877_ch_T0001520;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001520;transcript_name=NA12877_ch_T0001520;gene_name=TTTY10;ID=exon:NA12877_ch_T0001520:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21222902	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=NA12877_ch_T0001520;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001520;transcript_name=NA12877_ch_T0001520;gene_name=TTTY10;ID=intron:NA12877_ch_T0001520:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222903	21223100	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=NA12877_ch_T0001520;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001520;transcript_name=NA12877_ch_T0001520;gene_name=TTTY10;ID=exon:NA12877_ch_T0001520:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21223101	21224998	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=NA12877_ch_T0001520;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001520;transcript_name=NA12877_ch_T0001520;gene_name=TTTY10;ID=intron:NA12877_ch_T0001520:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21224999	21225167	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=NA12877_ch_T0001520;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001520;transcript_name=NA12877_ch_T0001520;gene_name=TTTY10;ID=exon:NA12877_ch_T0001520:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21225168	21278972	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=NA12877_ch_T0001520;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001520;transcript_name=NA12877_ch_T0001520;gene_name=TTTY10;ID=intron:NA12877_ch_T0001520:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279386	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=NA12877_ch_T0001520;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001520;transcript_name=NA12877_ch_T0001520;gene_name=TTTY10;ID=exon:NA12877_ch_T0001520:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21210949	21279012	1000	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=NA12877_ch_T0001521;Name=TTTY10
NA12877_chrY	CAT	exon	21210949	21211323	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=exon:NA12877_ch_T0001521:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21211324	21222137	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=intron:NA12877_ch_T0001521:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222138	21222196	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=exon:NA12877_ch_T0001521:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21222197	21222754	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=intron:NA12877_ch_T0001521:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21222755	21222867	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=exon:NA12877_ch_T0001521:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21222868	21224998	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=intron:NA12877_ch_T0001521:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21224999	21225167	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=exon:NA12877_ch_T0001521:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21225168	21228134	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=intron:NA12877_ch_T0001521:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21228135	21228307	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=exon:NA12877_ch_T0001521:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21228308	21231061	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=intron:NA12877_ch_T0001521:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21231062	21231153	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=exon:NA12877_ch_T0001521:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21231154	21278972	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=intron:NA12877_ch_T0001521:5;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279012	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=NA12877_ch_T0001521;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001521;transcript_name=NA12877_ch_T0001521;gene_name=TTTY10;ID=exon:NA12877_ch_T0001521:6;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21222977	21279350	1000	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=NA12877_ch_T0001522;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001522;gene_name=TTTY10;ID=NA12877_ch_T0001522;Name=TTTY10
NA12877_chrY	CAT	exon	21222977	21223100	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=NA12877_ch_T0001522;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001522;transcript_name=NA12877_ch_T0001522;gene_name=TTTY10;ID=exon:NA12877_ch_T0001522:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21223101	21224998	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=NA12877_ch_T0001522;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001522;transcript_name=NA12877_ch_T0001522;gene_name=TTTY10;ID=intron:NA12877_ch_T0001522:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21224999	21225167	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=NA12877_ch_T0001522;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001522;transcript_name=NA12877_ch_T0001522;gene_name=TTTY10;ID=exon:NA12877_ch_T0001522:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21225168	21228134	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=NA12877_ch_T0001522;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001522;transcript_name=NA12877_ch_T0001522;gene_name=TTTY10;ID=intron:NA12877_ch_T0001522:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21228135	21228307	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=NA12877_ch_T0001522;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001522;transcript_name=NA12877_ch_T0001522;gene_name=TTTY10;ID=exon:NA12877_ch_T0001522:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21228308	21231061	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=NA12877_ch_T0001522;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001522;transcript_name=NA12877_ch_T0001522;gene_name=TTTY10;ID=intron:NA12877_ch_T0001522:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21231062	21231153	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=NA12877_ch_T0001522;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001522;transcript_name=NA12877_ch_T0001522;gene_name=TTTY10;ID=exon:NA12877_ch_T0001522:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21231154	21278972	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=NA12877_ch_T0001522;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001522;transcript_name=NA12877_ch_T0001522;gene_name=TTTY10;ID=intron:NA12877_ch_T0001522:3;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279350	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=NA12877_ch_T0001522;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001522;transcript_name=NA12877_ch_T0001522;gene_name=TTTY10;ID=exon:NA12877_ch_T0001522:4;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21224579	21279364	1000	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=NA12877_ch_T0001523;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001523;gene_name=TTTY10;ID=NA12877_ch_T0001523;Name=TTTY10
NA12877_chrY	CAT	exon	21224579	21225167	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=NA12877_ch_T0001523;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001523;transcript_name=NA12877_ch_T0001523;gene_name=TTTY10;ID=exon:NA12877_ch_T0001523:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21225168	21228134	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=NA12877_ch_T0001523;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001523;transcript_name=NA12877_ch_T0001523;gene_name=TTTY10;ID=intron:NA12877_ch_T0001523:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21228135	21228307	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=NA12877_ch_T0001523;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001523;transcript_name=NA12877_ch_T0001523;gene_name=TTTY10;ID=exon:NA12877_ch_T0001523:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21228308	21278972	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=NA12877_ch_T0001523;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001523;transcript_name=NA12877_ch_T0001523;gene_name=TTTY10;ID=intron:NA12877_ch_T0001523:1;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21278973	21279364	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=NA12877_ch_T0001523;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001523;transcript_name=NA12877_ch_T0001523;gene_name=TTTY10;ID=exon:NA12877_ch_T0001523:2;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21278799	21279350	1000	-	.	source_transcript=ENST00000755220.1;source_transcript_name=TTTY10-218;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755220.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755220.1,ENST00000755220.1;transcript_id=NA12877_ch_T0001525;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_G0000482;transcript_name=NA12877_ch_T0001525;gene_name=TTTY10;ID=NA12877_ch_T0001525;Name=TTTY10
NA12877_chrY	CAT	exon	21278799	21279350	.	-	.	source_transcript=ENST00000755220.1;source_transcript_name=TTTY10-218;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755220.1,ENST00000755220.1;transcript_id=NA12877_ch_T0001525;gene_id=NA12877_ch_G0000482;Parent=NA12877_ch_T0001525;transcript_name=NA12877_ch_T0001525;gene_name=TTTY10;ID=exon:NA12877_ch_T0001525:0;Name=TTTY10;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21274089	21274386	.	-	.	source_gene_common_name=KDM5DP1;source_gene=ENSG00000277438.1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;gene_id=NA12877_ch_G0000483;gene_biotype=processed_pseudogene;gene_name=KDM5DP1;gene_sources=liftoff;ID=NA12877_ch_G0000483;Name=KDM5DP1
NA12877_chrY	CAT	transcript	21274089	21274386	1000	-	.	source_transcript=ENST00000622542.1;source_transcript_name=KDM5DP1-201;source_gene=ENSG00000277438.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000277438.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622542.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622542.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5DP1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;transcript_id=NA12877_ch_T0001524;gene_id=NA12877_ch_G0000483;Parent=NA12877_ch_G0000483;transcript_name=NA12877_ch_T0001524;gene_name=KDM5DP1;ID=NA12877_ch_T0001524;Name=KDM5DP1
NA12877_chrY	CAT	exon	21274089	21274386	.	-	.	source_transcript=ENST00000622542.1;source_transcript_name=KDM5DP1-201;source_gene=ENSG00000277438.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000277438.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622542.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622542.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5DP1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;transcript_id=NA12877_ch_T0001524;gene_id=NA12877_ch_G0000483;Parent=NA12877_ch_T0001524;transcript_name=NA12877_ch_T0001524;gene_name=KDM5DP1;ID=exon:NA12877_ch_T0001524:0;Name=KDM5DP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21279643	21297023	.	+	.	source_gene_common_name=EIF1AY;source_gene=ENSG00000198692.10;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;gene_id=NA12877_ch_G0000484;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff;ID=NA12877_ch_G0000484;Name=EIF1AY
NA12877_chrY	CAT	transcript	21279643	21297023	100	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_G0000484;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=NA12877_ch_T0001526;Name=EIF1AY
NA12877_chrY	CAT	exon	21279643	21279754	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001526:0;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21279739	21279754	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001526:0;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	21279739	21279741	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=start_codon:NA12877_ch_T0001526;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21279755	21283475	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001526:0;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21283476	21283559	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001526:1;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21283476	21283559	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001526:1;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21283560	21286457	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001526:1;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21286458	21286561	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001526:2;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21286458	21286561	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001526:2;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21286562	21288342	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001526:2;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21288343	21288393	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001526:3;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21288343	21288393	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001526:3;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21288394	21291892	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001526:3;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21291893	21291974	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001526:4;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21291893	21291974	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001526:4;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21291975	21293352	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001526:4;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21293353	21293444	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001526:5;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21293353	21293444	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001526:5;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21293445	21296209	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001526:5;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21296210	21297023	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001526:6;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21296210	21296215	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001526:6;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	21296213	21296215	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=NA12877_ch_T0001526;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001526;transcript_name=NA12877_ch_T0001526;gene_name=EIF1AY;ID=stop_codon:NA12877_ch_T0001526;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21279645	21292398	1000	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=NA12877_ch_T0001527;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_G0000484;transcript_name=NA12877_ch_T0001527;gene_name=EIF1AY;ID=NA12877_ch_T0001527;Name=EIF1AY
NA12877_chrY	CAT	exon	21279645	21279754	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=NA12877_ch_T0001527;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001527;transcript_name=NA12877_ch_T0001527;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001527:0;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21279755	21283475	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=NA12877_ch_T0001527;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001527;transcript_name=NA12877_ch_T0001527;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001527:0;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21283476	21283559	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=NA12877_ch_T0001527;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001527;transcript_name=NA12877_ch_T0001527;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001527:1;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21283560	21286457	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=NA12877_ch_T0001527;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001527;transcript_name=NA12877_ch_T0001527;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001527:1;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21286458	21286561	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=NA12877_ch_T0001527;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001527;transcript_name=NA12877_ch_T0001527;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001527:2;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21286562	21288342	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=NA12877_ch_T0001527;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001527;transcript_name=NA12877_ch_T0001527;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001527:2;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21288343	21288393	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=NA12877_ch_T0001527;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001527;transcript_name=NA12877_ch_T0001527;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001527:3;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21288394	21291892	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=NA12877_ch_T0001527;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001527;transcript_name=NA12877_ch_T0001527;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001527:3;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21291893	21292398	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=NA12877_ch_T0001527;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001527;transcript_name=NA12877_ch_T0001527;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001527:4;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21279661	21296499	100	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_G0000484;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=NA12877_ch_T0001528;Name=EIF1AY
NA12877_chrY	CAT	exon	21279661	21279754	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001528:0;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21279739	21279754	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001528:0;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	21279739	21279741	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=start_codon:NA12877_ch_T0001528;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21279755	21283475	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001528:0;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21283476	21283559	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001528:1;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21283476	21283559	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001528:1;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21283560	21286457	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001528:1;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21286458	21286561	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001528:2;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21286458	21286561	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001528:2;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21286562	21291892	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001528:2;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21291893	21291974	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001528:3;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21291893	21291974	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001528:3;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21291975	21293352	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001528:3;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21293353	21293444	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001528:4;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21293353	21293444	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001528:4;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21293445	21296209	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001528:4;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21296210	21296499	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001528:5;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21296210	21296215	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=CDS:NA12877_ch_T0001528:5;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	21296213	21296215	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=NA12877_ch_T0001528;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001528;transcript_name=NA12877_ch_T0001528;gene_name=EIF1AY;ID=stop_codon:NA12877_ch_T0001528;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21290587	21296499	1000	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=NA12877_ch_T0001529;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_G0000484;transcript_name=NA12877_ch_T0001529;gene_name=EIF1AY;ID=NA12877_ch_T0001529;Name=EIF1AY
NA12877_chrY	CAT	exon	21290587	21293444	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=NA12877_ch_T0001529;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001529;transcript_name=NA12877_ch_T0001529;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001529:0;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21293445	21296209	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=NA12877_ch_T0001529;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001529;transcript_name=NA12877_ch_T0001529;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001529:0;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21296210	21296499	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=NA12877_ch_T0001529;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001529;transcript_name=NA12877_ch_T0001529;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001529:1;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21291716	21296499	1000	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=NA12877_ch_T0001530;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_G0000484;transcript_name=NA12877_ch_T0001530;gene_name=EIF1AY;ID=NA12877_ch_T0001530;Name=EIF1AY
NA12877_chrY	CAT	exon	21291716	21291974	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=NA12877_ch_T0001530;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001530;transcript_name=NA12877_ch_T0001530;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001530:0;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21291975	21293352	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=NA12877_ch_T0001530;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001530;transcript_name=NA12877_ch_T0001530;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001530:0;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21293353	21293444	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=NA12877_ch_T0001530;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001530;transcript_name=NA12877_ch_T0001530;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001530:1;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21293445	21296209	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=NA12877_ch_T0001530;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001530;transcript_name=NA12877_ch_T0001530;gene_name=EIF1AY;ID=intron:NA12877_ch_T0001530:1;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21296210	21296499	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=NA12877_ch_T0001530;gene_id=NA12877_ch_G0000484;Parent=NA12877_ch_T0001530;transcript_name=NA12877_ch_T0001530;gene_name=EIF1AY;ID=exon:NA12877_ch_T0001530:2;Name=EIF1AY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21429229	21438424	.	-	.	source_gene_common_name=ENSG00000286247;source_gene=ENSG00000286247.2;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;gene_id=NA12877_ch_G0000485;gene_biotype=lncRNA;gene_name=ENSG00000286247;gene_sources=liftoff;ID=NA12877_ch_G0000485;Name=ENSG00000286247
NA12877_chrY	CAT	transcript	21429229	21438424	1000	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=NA12877_ch_T0001531;gene_id=NA12877_ch_G0000485;Parent=NA12877_ch_G0000485;transcript_name=NA12877_ch_T0001531;gene_name=ENSG00000286247;ID=NA12877_ch_T0001531;Name=ENSG00000286247
NA12877_chrY	CAT	exon	21429229	21429995	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=NA12877_ch_T0001531;gene_id=NA12877_ch_G0000485;Parent=NA12877_ch_T0001531;transcript_name=NA12877_ch_T0001531;gene_name=ENSG00000286247;ID=exon:NA12877_ch_T0001531:0;Name=ENSG00000286247;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21429996	21438366	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=NA12877_ch_T0001531;gene_id=NA12877_ch_G0000485;Parent=NA12877_ch_T0001531;transcript_name=NA12877_ch_T0001531;gene_name=ENSG00000286247;ID=intron:NA12877_ch_T0001531:0;Name=ENSG00000286247;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21438367	21438424	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=NA12877_ch_T0001531;gene_id=NA12877_ch_G0000485;Parent=NA12877_ch_T0001531;transcript_name=NA12877_ch_T0001531;gene_name=ENSG00000286247;ID=exon:NA12877_ch_T0001531:1;Name=ENSG00000286247;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21429700	21431178	1000	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=NA12877_ch_T0001532;gene_id=NA12877_ch_G0000485;Parent=NA12877_ch_G0000485;transcript_name=NA12877_ch_T0001532;gene_name=ENSG00000286247;ID=NA12877_ch_T0001532;Name=ENSG00000286247
NA12877_chrY	CAT	exon	21429700	21429995	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=NA12877_ch_T0001532;gene_id=NA12877_ch_G0000485;Parent=NA12877_ch_T0001532;transcript_name=NA12877_ch_T0001532;gene_name=ENSG00000286247;ID=exon:NA12877_ch_T0001532:0;Name=ENSG00000286247;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21429996	21431104	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=NA12877_ch_T0001532;gene_id=NA12877_ch_G0000485;Parent=NA12877_ch_T0001532;transcript_name=NA12877_ch_T0001532;gene_name=ENSG00000286247;ID=intron:NA12877_ch_T0001532:0;Name=ENSG00000286247;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21431105	21431178	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=NA12877_ch_T0001532;gene_id=NA12877_ch_G0000485;Parent=NA12877_ch_T0001532;transcript_name=NA12877_ch_T0001532;gene_name=ENSG00000286247;ID=exon:NA12877_ch_T0001532:1;Name=ENSG00000286247;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21431152	21446798	.	+	.	source_gene_common_name=TBL1YP1;source_gene=ENSG00000225624.1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;gene_id=NA12877_ch_G0000486;gene_biotype=unprocessed_pseudogene;gene_name=TBL1YP1;gene_sources=liftoff;ID=NA12877_ch_G0000486;Name=TBL1YP1
NA12877_chrY	CAT	transcript	21431152	21446798	1000	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_G0000486;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=NA12877_ch_T0001533;Name=TBL1YP1
NA12877_chrY	CAT	exon	21431152	21431395	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=exon:NA12877_ch_T0001533:0;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21431396	21433298	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=intron:NA12877_ch_T0001533:0;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21433299	21433429	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=exon:NA12877_ch_T0001533:1;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21433430	21433820	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=intron:NA12877_ch_T0001533:1;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21433821	21433968	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=exon:NA12877_ch_T0001533:2;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21433969	21434666	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=intron:NA12877_ch_T0001533:2;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21434667	21434730	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=exon:NA12877_ch_T0001533:3;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21434731	21434839	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=intron:NA12877_ch_T0001533:3;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21434840	21434938	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=exon:NA12877_ch_T0001533:4;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21434939	21437980	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=intron:NA12877_ch_T0001533:4;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21437981	21438048	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=exon:NA12877_ch_T0001533:5;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21438049	21444797	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=intron:NA12877_ch_T0001533:5;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21444798	21444871	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=exon:NA12877_ch_T0001533:6;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21444872	21445208	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=intron:NA12877_ch_T0001533:6;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21445209	21445333	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=exon:NA12877_ch_T0001533:7;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21445334	21446725	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=intron:NA12877_ch_T0001533:7;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21446726	21446798	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=NA12877_ch_T0001533;gene_id=NA12877_ch_G0000486;Parent=NA12877_ch_T0001533;transcript_name=NA12877_ch_T0001533;gene_name=TBL1YP1;ID=exon:NA12877_ch_T0001533:8;Name=TBL1YP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21460006	21484931	.	+	.	source_gene_common_name=RPS4Y2;source_gene=ENSG00000280969.2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;gene_id=NA12877_ch_G0000487;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff;ID=NA12877_ch_G0000487;Name=RPS4Y2
NA12877_chrY	CAT	transcript	21460006	21484931	100	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_G0000487;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=NA12877_ch_T0001534;Name=RPS4Y2
NA12877_chrY	CAT	exon	21460006	21460064	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=exon:NA12877_ch_T0001534:0;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21460062	21460064	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=CDS:NA12877_ch_T0001534:0;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	21460062	21460064	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=start_codon:NA12877_ch_T0001534;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21460065	21460675	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=intron:NA12877_ch_T0001534:0;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21460676	21460753	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=exon:NA12877_ch_T0001534:1;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21460676	21460753	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=CDS:NA12877_ch_T0001534:1;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21460754	21463766	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=intron:NA12877_ch_T0001534:1;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21463767	21463947	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=exon:NA12877_ch_T0001534:2;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21463767	21463947	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=CDS:NA12877_ch_T0001534:2;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21463948	21465182	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=intron:NA12877_ch_T0001534:2;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21465183	21465280	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=exon:NA12877_ch_T0001534:3;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21465183	21465280	.	+	2	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=CDS:NA12877_ch_T0001534:3;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21465281	21472703	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=intron:NA12877_ch_T0001534:3;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21472704	21472875	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=exon:NA12877_ch_T0001534:4;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21472704	21472875	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=CDS:NA12877_ch_T0001534:4;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21472876	21483407	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=intron:NA12877_ch_T0001534:4;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21483408	21483565	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=exon:NA12877_ch_T0001534:5;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21483408	21483565	.	+	2	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=CDS:NA12877_ch_T0001534:5;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21483566	21484829	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=intron:NA12877_ch_T0001534:5;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21484830	21484931	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=exon:NA12877_ch_T0001534:6;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	21484830	21484931	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=CDS:NA12877_ch_T0001534:6;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	21484929	21484931	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=NA12877_ch_T0001534;gene_id=NA12877_ch_G0000487;Parent=NA12877_ch_T0001534;transcript_name=NA12877_ch_T0001534;gene_name=RPS4Y2;ID=stop_codon:NA12877_ch_T0001534;Name=RPS4Y2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21512675	21515708	.	-	.	source_gene_common_name=HSFY4P;source_gene=ENSG00000224482.1;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;gene_id=NA12877_ch_G0000488;gene_biotype=unprocessed_pseudogene;gene_name=HSFY4P;gene_sources=liftoff;ID=NA12877_ch_G0000488;Name=HSFY4P
NA12877_chrY	CAT	transcript	21512675	21515708	1000	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=NA12877_ch_T0001535;gene_id=NA12877_ch_G0000488;Parent=NA12877_ch_G0000488;transcript_name=NA12877_ch_T0001535;gene_name=HSFY4P;ID=NA12877_ch_T0001535;Name=HSFY4P
NA12877_chrY	CAT	exon	21512675	21513364	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=NA12877_ch_T0001535;gene_id=NA12877_ch_G0000488;Parent=NA12877_ch_T0001535;transcript_name=NA12877_ch_T0001535;gene_name=HSFY4P;ID=exon:NA12877_ch_T0001535:0;Name=HSFY4P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21513365	21515217	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=NA12877_ch_T0001535;gene_id=NA12877_ch_G0000488;Parent=NA12877_ch_T0001535;transcript_name=NA12877_ch_T0001535;gene_name=HSFY4P;ID=intron:NA12877_ch_T0001535:0;Name=HSFY4P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21515218	21515708	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=NA12877_ch_T0001535;gene_id=NA12877_ch_G0000488;Parent=NA12877_ch_T0001535;transcript_name=NA12877_ch_T0001535;gene_name=HSFY4P;ID=exon:NA12877_ch_T0001535:1;Name=HSFY4P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21547157	21547611	.	-	.	source_gene_common_name=ENSG00000216844;source_gene=ENSG00000216844.1;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;gene_id=NA12877_ch_G0000489;gene_biotype=processed_pseudogene;gene_name=ENSG00000216844;gene_sources=liftoff;ID=NA12877_ch_G0000489;Name=ENSG00000216844
NA12877_chrY	CAT	transcript	21547157	21547611	1000	-	.	source_transcript=ENST00000406090.1;source_transcript_name=ENST00000406090;source_gene=ENSG00000216844.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216844.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000406090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000406090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000216844;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;transcript_id=NA12877_ch_T0001536;gene_id=NA12877_ch_G0000489;Parent=NA12877_ch_G0000489;transcript_name=NA12877_ch_T0001536;gene_name=ENSG00000216844;ID=NA12877_ch_T0001536;Name=ENSG00000216844
NA12877_chrY	CAT	exon	21547157	21547611	.	-	.	source_transcript=ENST00000406090.1;source_transcript_name=ENST00000406090;source_gene=ENSG00000216844.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216844.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000406090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000406090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000216844;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;transcript_id=NA12877_ch_T0001536;gene_id=NA12877_ch_G0000489;Parent=NA12877_ch_T0001536;transcript_name=NA12877_ch_T0001536;gene_name=ENSG00000216844;ID=exon:NA12877_ch_T0001536:0;Name=ENSG00000216844;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21565238	21566238	.	+	.	source_gene_common_name=GAPDHP17;source_gene=ENSG00000229551.2;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;gene_id=NA12877_ch_G0000490;gene_biotype=processed_pseudogene;gene_name=GAPDHP17;gene_sources=liftoff;ID=NA12877_ch_G0000490;Name=GAPDHP17
NA12877_chrY	CAT	transcript	21565238	21566238	1000	+	.	source_transcript=ENST00000449858.2;source_transcript_name=GAPDHP17-201;source_gene=ENSG00000229551.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229551.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000449858.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000449858.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP17;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;transcript_id=NA12877_ch_T0001537;gene_id=NA12877_ch_G0000490;Parent=NA12877_ch_G0000490;transcript_name=NA12877_ch_T0001537;gene_name=GAPDHP17;ID=NA12877_ch_T0001537;Name=GAPDHP17
NA12877_chrY	CAT	exon	21565238	21566238	.	+	.	source_transcript=ENST00000449858.2;source_transcript_name=GAPDHP17-201;source_gene=ENSG00000229551.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229551.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000449858.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000449858.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP17;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;transcript_id=NA12877_ch_T0001537;gene_id=NA12877_ch_G0000490;Parent=NA12877_ch_T0001537;transcript_name=NA12877_ch_T0001537;gene_name=GAPDHP17;ID=exon:NA12877_ch_T0001537:0;Name=GAPDHP17;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21611258	21611476	.	-	.	source_gene_common_name=TMEM167AP1;source_gene=ENSG00000226504.1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;gene_id=NA12877_ch_G0000491;gene_biotype=processed_pseudogene;gene_name=TMEM167AP1;gene_sources=liftoff;ID=NA12877_ch_G0000491;Name=TMEM167AP1
NA12877_chrY	CAT	transcript	21611258	21611476	1000	-	.	source_transcript=ENST00000423409.1;source_transcript_name=TMEM167AP1-201;source_gene=ENSG00000226504.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226504.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423409.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMEM167AP1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;transcript_id=NA12877_ch_T0001538;gene_id=NA12877_ch_G0000491;Parent=NA12877_ch_G0000491;transcript_name=NA12877_ch_T0001538;gene_name=TMEM167AP1;ID=NA12877_ch_T0001538;Name=TMEM167AP1
NA12877_chrY	CAT	exon	21611258	21611476	.	-	.	source_transcript=ENST00000423409.1;source_transcript_name=TMEM167AP1-201;source_gene=ENSG00000226504.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226504.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423409.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMEM167AP1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;transcript_id=NA12877_ch_T0001538;gene_id=NA12877_ch_G0000491;Parent=NA12877_ch_T0001538;transcript_name=NA12877_ch_T0001538;gene_name=TMEM167AP1;ID=exon:NA12877_ch_T0001538:0;Name=TMEM167AP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21742205	21748640	.	-	.	source_gene_common_name=ENSG00000254488;source_gene=ENSG00000254488.1;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;gene_id=NA12877_ch_G0000492;gene_biotype=lncRNA;gene_name=ENSG00000254488;gene_sources=liftoff;ID=NA12877_ch_G0000492;Name=ENSG00000254488
NA12877_chrY	CAT	transcript	21742205	21748640	1000	-	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;transcript_id=NA12877_ch_T0001539;gene_id=NA12877_ch_G0000492;Parent=NA12877_ch_G0000492;transcript_name=NA12877_ch_T0001539;gene_name=ENSG00000254488;ID=NA12877_ch_T0001539;Name=ENSG00000254488
NA12877_chrY	CAT	exon	21742205	21742960	.	-	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;transcript_id=NA12877_ch_T0001539;gene_id=NA12877_ch_G0000492;Parent=NA12877_ch_T0001539;transcript_name=NA12877_ch_T0001539;gene_name=ENSG00000254488;ID=exon:NA12877_ch_T0001539:0;Name=ENSG00000254488;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21742961	21746184	.	-	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;transcript_id=NA12877_ch_T0001539;gene_id=NA12877_ch_G0000492;Parent=NA12877_ch_T0001539;transcript_name=NA12877_ch_T0001539;gene_name=ENSG00000254488;ID=intron:NA12877_ch_T0001539:0;Name=ENSG00000254488;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21746185	21746285	.	-	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;transcript_id=NA12877_ch_T0001539;gene_id=NA12877_ch_G0000492;Parent=NA12877_ch_T0001539;transcript_name=NA12877_ch_T0001539;gene_name=ENSG00000254488;ID=exon:NA12877_ch_T0001539:1;Name=ENSG00000254488;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21746286	21748514	.	-	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;transcript_id=NA12877_ch_T0001539;gene_id=NA12877_ch_G0000492;Parent=NA12877_ch_T0001539;transcript_name=NA12877_ch_T0001539;gene_name=ENSG00000254488;ID=intron:NA12877_ch_T0001539:1;Name=ENSG00000254488;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21748515	21748640	.	-	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1,ENST00000527562.1;transcript_id=NA12877_ch_T0001539;gene_id=NA12877_ch_G0000492;Parent=NA12877_ch_T0001539;transcript_name=NA12877_ch_T0001539;gene_name=ENSG00000254488;ID=exon:NA12877_ch_T0001539:2;Name=ENSG00000254488;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21834787	21835098	.	+	.	source_gene_common_name=TOMM22P1;source_gene=ENSG00000237427.1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;gene_id=NA12877_ch_G0000493;gene_biotype=processed_pseudogene;gene_name=TOMM22P1;gene_sources=liftoff;ID=NA12877_ch_G0000493;Name=TOMM22P1
NA12877_chrY	CAT	transcript	21834787	21835098	1000	+	.	source_transcript=ENST00000418578.1;source_transcript_name=TOMM22P1-201;source_gene=ENSG00000237427.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237427.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418578.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418578.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;transcript_id=NA12877_ch_T0001540;gene_id=NA12877_ch_G0000493;Parent=NA12877_ch_G0000493;transcript_name=NA12877_ch_T0001540;gene_name=TOMM22P1;ID=NA12877_ch_T0001540;Name=TOMM22P1
NA12877_chrY	CAT	exon	21834787	21835098	.	+	.	source_transcript=ENST00000418578.1;source_transcript_name=TOMM22P1-201;source_gene=ENSG00000237427.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237427.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418578.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418578.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;transcript_id=NA12877_ch_T0001540;gene_id=NA12877_ch_G0000493;Parent=NA12877_ch_T0001540;transcript_name=NA12877_ch_T0001540;gene_name=TOMM22P1;ID=exon:NA12877_ch_T0001540:0;Name=TOMM22P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21839164	21841768	.	-	.	source_gene_common_name=ENSG00000297760;source_gene=ENSG00000297760.1;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;gene_id=NA12877_ch_G0000494;gene_biotype=lncRNA;gene_name=ENSG00000297760;gene_sources=liftoff;ID=NA12877_ch_G0000494;Name=ENSG00000297760
NA12877_chrY	CAT	transcript	21839164	21841768	1000	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=NA12877_ch_T0001541;gene_id=NA12877_ch_G0000494;Parent=NA12877_ch_G0000494;transcript_name=NA12877_ch_T0001541;gene_name=ENSG00000297760;ID=NA12877_ch_T0001541;Name=ENSG00000297760
NA12877_chrY	CAT	exon	21839164	21840629	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=NA12877_ch_T0001541;gene_id=NA12877_ch_G0000494;Parent=NA12877_ch_T0001541;transcript_name=NA12877_ch_T0001541;gene_name=ENSG00000297760;ID=exon:NA12877_ch_T0001541:0;Name=ENSG00000297760;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21840630	21841661	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=NA12877_ch_T0001541;gene_id=NA12877_ch_G0000494;Parent=NA12877_ch_T0001541;transcript_name=NA12877_ch_T0001541;gene_name=ENSG00000297760;ID=intron:NA12877_ch_T0001541:0;Name=ENSG00000297760;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21841662	21841768	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=NA12877_ch_T0001541;gene_id=NA12877_ch_G0000494;Parent=NA12877_ch_T0001541;transcript_name=NA12877_ch_T0001541;gene_name=ENSG00000297760;ID=exon:NA12877_ch_T0001541:1;Name=ENSG00000297760;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21842548	21961752	.	+	.	source_gene_common_name=ENSG00000289707;source_gene=ENSG00000289707.2;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;gene_id=NA12877_ch_G0000495;gene_biotype=lncRNA;gene_name=ENSG00000289707;gene_sources=liftoff;ID=NA12877_ch_G0000495;Name=ENSG00000289707
NA12877_chrY	CAT	transcript	21842548	21877516	1000	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=NA12877_ch_T0001542;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_G0000495;transcript_name=NA12877_ch_T0001542;gene_name=ENSG00000289707;ID=NA12877_ch_T0001542;Name=ENSG00000289707
NA12877_chrY	CAT	exon	21842548	21842783	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=NA12877_ch_T0001542;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001542;transcript_name=NA12877_ch_T0001542;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001542:0;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21842784	21852333	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=NA12877_ch_T0001542;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001542;transcript_name=NA12877_ch_T0001542;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001542:0;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21852334	21852428	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=NA12877_ch_T0001542;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001542;transcript_name=NA12877_ch_T0001542;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001542:1;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21852429	21855507	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=NA12877_ch_T0001542;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001542;transcript_name=NA12877_ch_T0001542;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001542:1;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21855508	21855561	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=NA12877_ch_T0001542;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001542;transcript_name=NA12877_ch_T0001542;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001542:2;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21855562	21856757	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=NA12877_ch_T0001542;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001542;transcript_name=NA12877_ch_T0001542;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001542:2;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21856758	21856892	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=NA12877_ch_T0001542;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001542;transcript_name=NA12877_ch_T0001542;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001542:3;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21856893	21873878	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=NA12877_ch_T0001542;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001542;transcript_name=NA12877_ch_T0001542;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001542:3;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21873879	21877516	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=NA12877_ch_T0001542;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001542;transcript_name=NA12877_ch_T0001542;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001542:4;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21842548	21961752	1000	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_G0000495;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=NA12877_ch_T0001543;Name=ENSG00000289707
NA12877_chrY	CAT	exon	21842548	21842783	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001543:0;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21842784	21852333	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001543:0;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21852334	21852428	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001543:1;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21852429	21855507	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001543:1;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21855508	21855561	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001543:2;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21855562	21856757	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001543:2;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21856758	21856892	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001543:3;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21856893	21901062	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001543:3;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21901063	21901126	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001543:4;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21901127	21932274	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001543:4;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21932275	21932382	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001543:5;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21932383	21954472	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001543:5;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21954473	21954631	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001543:6;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21954632	21957045	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001543:6;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21957046	21957116	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001543:7;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21957117	21959339	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001543:7;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21959340	21961752	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=NA12877_ch_T0001543;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001543;transcript_name=NA12877_ch_T0001543;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001543:8;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	21932060	21957116	1000	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=NA12877_ch_T0001545;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_G0000495;transcript_name=NA12877_ch_T0001545;gene_name=ENSG00000289707;ID=NA12877_ch_T0001545;Name=ENSG00000289707
NA12877_chrY	CAT	exon	21932060	21932097	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=NA12877_ch_T0001545;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001545;transcript_name=NA12877_ch_T0001545;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001545:0;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21932098	21932274	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=NA12877_ch_T0001545;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001545;transcript_name=NA12877_ch_T0001545;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001545:0;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21932275	21932382	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=NA12877_ch_T0001545;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001545;transcript_name=NA12877_ch_T0001545;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001545:1;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21932383	21954472	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=NA12877_ch_T0001545;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001545;transcript_name=NA12877_ch_T0001545;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001545:1;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21954473	21954631	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=NA12877_ch_T0001545;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001545;transcript_name=NA12877_ch_T0001545;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001545:2;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	21954632	21957045	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=NA12877_ch_T0001545;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001545;transcript_name=NA12877_ch_T0001545;gene_name=ENSG00000289707;ID=intron:NA12877_ch_T0001545:2;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	21957046	21957116	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=NA12877_ch_T0001545;gene_id=NA12877_ch_G0000495;Parent=NA12877_ch_T0001545;transcript_name=NA12877_ch_T0001545;gene_name=ENSG00000289707;ID=exon:NA12877_ch_T0001545:3;Name=ENSG00000289707;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	21925029	21926012	.	-	.	source_gene_common_name=NEFLP1;source_gene=ENSG00000232634.1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;gene_id=NA12877_ch_G0000496;gene_biotype=processed_pseudogene;gene_name=NEFLP1;gene_sources=liftoff;ID=NA12877_ch_G0000496;Name=NEFLP1
NA12877_chrY	CAT	transcript	21925029	21926012	1000	-	.	source_transcript=ENST00000436364.1;source_transcript_name=NEFLP1-201;source_gene=ENSG00000232634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436364.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NEFLP1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;transcript_id=NA12877_ch_T0001544;gene_id=NA12877_ch_G0000496;Parent=NA12877_ch_G0000496;transcript_name=NA12877_ch_T0001544;gene_name=NEFLP1;ID=NA12877_ch_T0001544;Name=NEFLP1
NA12877_chrY	CAT	exon	21925029	21926012	.	-	.	source_transcript=ENST00000436364.1;source_transcript_name=NEFLP1-201;source_gene=ENSG00000232634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436364.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NEFLP1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;transcript_id=NA12877_ch_T0001544;gene_id=NA12877_ch_G0000496;Parent=NA12877_ch_T0001544;transcript_name=NA12877_ch_T0001544;gene_name=NEFLP1;ID=exon:NA12877_ch_T0001544:0;Name=NEFLP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22015188	22022815	.	+	.	source_gene_common_name=ENSG00000226918;source_gene=ENSG00000226918.1;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;gene_id=NA12877_ch_G0000497;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000226918;gene_sources=liftoff;ID=NA12877_ch_G0000497;Name=ENSG00000226918
NA12877_chrY	CAT	transcript	22015188	22022815	1000	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_G0000497;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=NA12877_ch_T0001546;Name=ENSG00000226918
NA12877_chrY	CAT	exon	22015188	22015296	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=exon:NA12877_ch_T0001546:0;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22015297	22015741	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=intron:NA12877_ch_T0001546:0;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22015742	22015920	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=exon:NA12877_ch_T0001546:1;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22015921	22018097	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=intron:NA12877_ch_T0001546:1;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22018098	22018215	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=exon:NA12877_ch_T0001546:2;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22018216	22018526	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=intron:NA12877_ch_T0001546:2;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22018527	22018557	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=exon:NA12877_ch_T0001546:3;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22018558	22020553	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=intron:NA12877_ch_T0001546:3;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22020554	22020668	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=exon:NA12877_ch_T0001546:4;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22020669	22021535	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=intron:NA12877_ch_T0001546:4;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22021536	22021646	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=exon:NA12877_ch_T0001546:5;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22021647	22021727	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=intron:NA12877_ch_T0001546:5;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22021728	22021816	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=exon:NA12877_ch_T0001546:6;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22021817	22022239	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=intron:NA12877_ch_T0001546:6;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22022240	22022417	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=exon:NA12877_ch_T0001546:7;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22022418	22022693	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=intron:NA12877_ch_T0001546:7;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22022694	22022815	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=NA12877_ch_T0001546;gene_id=NA12877_ch_G0000497;Parent=NA12877_ch_T0001546;transcript_name=NA12877_ch_T0001546;gene_name=ENSG00000226918;ID=exon:NA12877_ch_T0001546:8;Name=ENSG00000226918;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22086876	22090282	.	-	.	source_gene_common_name=PRORY;source_gene=ENSG00000183146.4;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;gene_id=NA12877_ch_G0000498;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=NA12877_ch_G0000498;Name=PRORY
NA12877_chrY	CAT	transcript	22086876	22090282	1000	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=NA12877_ch_T0001547;gene_id=NA12877_ch_G0000498;Parent=NA12877_ch_G0000498;transcript_name=NA12877_ch_T0001547;gene_name=PRORY;ID=NA12877_ch_T0001547;Name=PRORY
NA12877_chrY	CAT	exon	22086876	22087202	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=NA12877_ch_T0001547;gene_id=NA12877_ch_G0000498;Parent=NA12877_ch_T0001547;transcript_name=NA12877_ch_T0001547;gene_name=PRORY;ID=exon:NA12877_ch_T0001547:0;Name=PRORY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22087203	22087353	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=NA12877_ch_T0001547;gene_id=NA12877_ch_G0000498;Parent=NA12877_ch_T0001547;transcript_name=NA12877_ch_T0001547;gene_name=PRORY;ID=intron:NA12877_ch_T0001547:0;Name=PRORY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22087354	22087718	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=NA12877_ch_T0001547;gene_id=NA12877_ch_G0000498;Parent=NA12877_ch_T0001547;transcript_name=NA12877_ch_T0001547;gene_name=PRORY;ID=exon:NA12877_ch_T0001547:1;Name=PRORY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22087719	22087834	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=NA12877_ch_T0001547;gene_id=NA12877_ch_G0000498;Parent=NA12877_ch_T0001547;transcript_name=NA12877_ch_T0001547;gene_name=PRORY;ID=intron:NA12877_ch_T0001547:1;Name=PRORY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22087835	22087891	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=NA12877_ch_T0001547;gene_id=NA12877_ch_G0000498;Parent=NA12877_ch_T0001547;transcript_name=NA12877_ch_T0001547;gene_name=PRORY;ID=exon:NA12877_ch_T0001547:2;Name=PRORY;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22087892	22090153	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=NA12877_ch_T0001547;gene_id=NA12877_ch_G0000498;Parent=NA12877_ch_T0001547;transcript_name=NA12877_ch_T0001547;gene_name=PRORY;ID=intron:NA12877_ch_T0001547:2;Name=PRORY;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22090154	22090282	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=NA12877_ch_T0001547;gene_id=NA12877_ch_G0000498;Parent=NA12877_ch_T0001547;transcript_name=NA12877_ch_T0001547;gene_name=PRORY;ID=exon:NA12877_ch_T0001547:3;Name=PRORY;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22098559	22155850	.	-	.	source_gene_common_name=ENSG00000293672;source_gene=ENSG00000293672.1;gene_id=NA12877_ch_G0000499;gene_biotype=lncRNA;gene_name=ENSG00000293672;gene_sources=liftoff;ID=NA12877_ch_G0000499;Name=ENSG00000293672
NA12877_chrY	CAT	transcript	22098559	22155850	1000	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=NA12877_ch_T0001548;gene_id=NA12877_ch_G0000499;Parent=NA12877_ch_G0000499;transcript_name=NA12877_ch_T0001548;gene_name=ENSG00000293672;ID=NA12877_ch_T0001548;Name=ENSG00000293672
NA12877_chrY	CAT	exon	22098559	22099213	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=NA12877_ch_T0001548;gene_id=NA12877_ch_G0000499;Parent=NA12877_ch_T0001548;transcript_name=NA12877_ch_T0001548;gene_name=ENSG00000293672;ID=exon:NA12877_ch_T0001548:0;Name=ENSG00000293672;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22099214	22099621	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=NA12877_ch_T0001548;gene_id=NA12877_ch_G0000499;Parent=NA12877_ch_T0001548;transcript_name=NA12877_ch_T0001548;gene_name=ENSG00000293672;ID=intron:NA12877_ch_T0001548:0;Name=ENSG00000293672;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22099622	22099710	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=NA12877_ch_T0001548;gene_id=NA12877_ch_G0000499;Parent=NA12877_ch_T0001548;transcript_name=NA12877_ch_T0001548;gene_name=ENSG00000293672;ID=exon:NA12877_ch_T0001548:1;Name=ENSG00000293672;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22099711	22155565	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=NA12877_ch_T0001548;gene_id=NA12877_ch_G0000499;Parent=NA12877_ch_T0001548;transcript_name=NA12877_ch_T0001548;gene_name=ENSG00000293672;ID=intron:NA12877_ch_T0001548:1;Name=ENSG00000293672;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22155566	22155850	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=NA12877_ch_T0001548;gene_id=NA12877_ch_G0000499;Parent=NA12877_ch_T0001548;transcript_name=NA12877_ch_T0001548;gene_name=ENSG00000293672;ID=exon:NA12877_ch_T0001548:2;Name=ENSG00000293672;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22098630	22108693	.	-	.	source_gene_common_name=ENSG00000290954;source_gene=ENSG00000290954.2;gene_id=NA12877_ch_G0000500;gene_biotype=lncRNA;gene_name=ENSG00000290954;gene_sources=liftoff;ID=NA12877_ch_G0000500;Name=ENSG00000290954
NA12877_chrY	CAT	transcript	22098630	22108659	1000	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001549;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_G0000500;transcript_name=NA12877_ch_T0001549;gene_name=ENSG00000290954;ID=NA12877_ch_T0001549;Name=ENSG00000290954
NA12877_chrY	CAT	exon	22098630	22099213	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001549;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001549;transcript_name=NA12877_ch_T0001549;gene_name=ENSG00000290954;ID=exon:NA12877_ch_T0001549:0;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22099214	22099621	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001549;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001549;transcript_name=NA12877_ch_T0001549;gene_name=ENSG00000290954;ID=intron:NA12877_ch_T0001549:0;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22099622	22099710	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001549;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001549;transcript_name=NA12877_ch_T0001549;gene_name=ENSG00000290954;ID=exon:NA12877_ch_T0001549:1;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22099711	22099792	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001549;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001549;transcript_name=NA12877_ch_T0001549;gene_name=ENSG00000290954;ID=intron:NA12877_ch_T0001549:1;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22099793	22099903	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001549;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001549;transcript_name=NA12877_ch_T0001549;gene_name=ENSG00000290954;ID=exon:NA12877_ch_T0001549:2;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22099904	22105398	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001549;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001549;transcript_name=NA12877_ch_T0001549;gene_name=ENSG00000290954;ID=intron:NA12877_ch_T0001549:2;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22105399	22105511	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001549;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001549;transcript_name=NA12877_ch_T0001549;gene_name=ENSG00000290954;ID=exon:NA12877_ch_T0001549:3;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22105512	22107839	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001549;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001549;transcript_name=NA12877_ch_T0001549;gene_name=ENSG00000290954;ID=intron:NA12877_ch_T0001549:3;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22107840	22107904	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001549;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001549;transcript_name=NA12877_ch_T0001549;gene_name=ENSG00000290954;ID=exon:NA12877_ch_T0001549:4;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22107905	22108550	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001549;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001549;transcript_name=NA12877_ch_T0001549;gene_name=ENSG00000290954;ID=intron:NA12877_ch_T0001549:4;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22108551	22108659	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001549;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001549;transcript_name=NA12877_ch_T0001549;gene_name=ENSG00000290954;ID=exon:NA12877_ch_T0001549:5;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22099070	22108693	1000	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001551;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_G0000500;transcript_name=NA12877_ch_T0001551;gene_name=ENSG00000290954;ID=NA12877_ch_T0001551;Name=ENSG00000290954
NA12877_chrY	CAT	exon	22099070	22099213	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001551;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001551;transcript_name=NA12877_ch_T0001551;gene_name=ENSG00000290954;ID=exon:NA12877_ch_T0001551:0;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22099214	22099621	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001551;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001551;transcript_name=NA12877_ch_T0001551;gene_name=ENSG00000290954;ID=intron:NA12877_ch_T0001551:0;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22099622	22099710	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001551;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001551;transcript_name=NA12877_ch_T0001551;gene_name=ENSG00000290954;ID=exon:NA12877_ch_T0001551:1;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22099711	22099792	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001551;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001551;transcript_name=NA12877_ch_T0001551;gene_name=ENSG00000290954;ID=intron:NA12877_ch_T0001551:1;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22099793	22099903	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001551;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001551;transcript_name=NA12877_ch_T0001551;gene_name=ENSG00000290954;ID=exon:NA12877_ch_T0001551:2;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22099904	22104844	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001551;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001551;transcript_name=NA12877_ch_T0001551;gene_name=ENSG00000290954;ID=intron:NA12877_ch_T0001551:2;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22104845	22104948	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001551;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001551;transcript_name=NA12877_ch_T0001551;gene_name=ENSG00000290954;ID=exon:NA12877_ch_T0001551:3;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22104949	22105398	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001551;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001551;transcript_name=NA12877_ch_T0001551;gene_name=ENSG00000290954;ID=intron:NA12877_ch_T0001551:3;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22105399	22105511	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001551;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001551;transcript_name=NA12877_ch_T0001551;gene_name=ENSG00000290954;ID=exon:NA12877_ch_T0001551:4;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22105512	22108550	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001551;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001551;transcript_name=NA12877_ch_T0001551;gene_name=ENSG00000290954;ID=intron:NA12877_ch_T0001551:4;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22108551	22108693	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=NA12877_ch_T0001551;gene_id=NA12877_ch_G0000500;Parent=NA12877_ch_T0001551;transcript_name=NA12877_ch_T0001551;gene_name=ENSG00000290954;ID=exon:NA12877_ch_T0001551:5;Name=ENSG00000290954;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22098913	22105507	.	-	.	source_gene_common_name=RBMY2EP;source_gene=ENSG00000223637.9;gene_id=NA12877_ch_G0000501;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=NA12877_ch_G0000501;Name=RBMY2EP
NA12877_chrY	CAT	transcript	22098913	22105507	1000	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_G0000501;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=NA12877_ch_T0001550;Name=RBMY2EP
NA12877_chrY	CAT	exon	22098913	22099213	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=exon:NA12877_ch_T0001550:0;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22099214	22099621	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=intron:NA12877_ch_T0001550:0;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22099622	22099710	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=exon:NA12877_ch_T0001550:1;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22099711	22099792	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=intron:NA12877_ch_T0001550:1;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22099793	22099903	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=exon:NA12877_ch_T0001550:2;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22099904	22100267	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=intron:NA12877_ch_T0001550:2;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22100268	22100378	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=exon:NA12877_ch_T0001550:3;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22100379	22101259	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=intron:NA12877_ch_T0001550:3;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22101260	22101374	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=exon:NA12877_ch_T0001550:4;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22101375	22104844	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=intron:NA12877_ch_T0001550:4;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22104845	22104948	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=exon:NA12877_ch_T0001550:5;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22104949	22105398	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=intron:NA12877_ch_T0001550:5;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22105399	22105507	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=NA12877_ch_T0001550;gene_id=NA12877_ch_G0000501;Parent=NA12877_ch_T0001550;transcript_name=NA12877_ch_T0001550;gene_name=RBMY2EP;ID=exon:NA12877_ch_T0001550:6;Name=RBMY2EP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22109692	22109917	.	+	.	source_gene_common_name=ENSG00000236615;source_gene=ENSG00000236615.1;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;gene_id=NA12877_ch_G0000502;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236615;gene_sources=liftoff;ID=NA12877_ch_G0000502;Name=ENSG00000236615
NA12877_chrY	CAT	transcript	22109692	22109917	1000	+	.	source_transcript=ENST00000428616.1;source_transcript_name=ENST00000428616;source_gene=ENSG00000236615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428616.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428616.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236615;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;transcript_id=NA12877_ch_T0001552;gene_id=NA12877_ch_G0000502;Parent=NA12877_ch_G0000502;transcript_name=NA12877_ch_T0001552;gene_name=ENSG00000236615;ID=NA12877_ch_T0001552;Name=ENSG00000236615
NA12877_chrY	CAT	exon	22109692	22109917	.	+	.	source_transcript=ENST00000428616.1;source_transcript_name=ENST00000428616;source_gene=ENSG00000236615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428616.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428616.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236615;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;transcript_id=NA12877_ch_T0001552;gene_id=NA12877_ch_G0000502;Parent=NA12877_ch_T0001552;transcript_name=NA12877_ch_T0001552;gene_name=ENSG00000236615;ID=exon:NA12877_ch_T0001552:0;Name=ENSG00000236615;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22127950	22160138	.	-	.	source_gene_common_name=ENSG00000288057;source_gene=ENSG00000288057.2;gene_id=NA12877_ch_G0000503;gene_biotype=lncRNA;gene_name=ENSG00000288057;gene_sources=liftoff;ID=NA12877_ch_G0000503;Name=ENSG00000288057
NA12877_chrY	CAT	transcript	22127950	22160138	1000	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001553;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_G0000503;transcript_name=NA12877_ch_T0001553;gene_name=ENSG00000288057;ID=NA12877_ch_T0001553;Name=ENSG00000288057
NA12877_chrY	CAT	exon	22127950	22130185	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001553;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_T0001553;transcript_name=NA12877_ch_T0001553;gene_name=ENSG00000288057;ID=exon:NA12877_ch_T0001553:0;Name=ENSG00000288057;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22130186	22155565	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001553;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_T0001553;transcript_name=NA12877_ch_T0001553;gene_name=ENSG00000288057;ID=intron:NA12877_ch_T0001553:0;Name=ENSG00000288057;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22155566	22155728	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001553;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_T0001553;transcript_name=NA12877_ch_T0001553;gene_name=ENSG00000288057;ID=exon:NA12877_ch_T0001553:1;Name=ENSG00000288057;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22155729	22158444	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001553;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_T0001553;transcript_name=NA12877_ch_T0001553;gene_name=ENSG00000288057;ID=intron:NA12877_ch_T0001553:1;Name=ENSG00000288057;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22158445	22158584	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001553;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_T0001553;transcript_name=NA12877_ch_T0001553;gene_name=ENSG00000288057;ID=exon:NA12877_ch_T0001553:2;Name=ENSG00000288057;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22158585	22159819	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001553;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_T0001553;transcript_name=NA12877_ch_T0001553;gene_name=ENSG00000288057;ID=intron:NA12877_ch_T0001553:2;Name=ENSG00000288057;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22159820	22160138	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001553;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_T0001553;transcript_name=NA12877_ch_T0001553;gene_name=ENSG00000288057;ID=exon:NA12877_ch_T0001553:3;Name=ENSG00000288057;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22129802	22155767	1000	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001554;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_G0000503;transcript_name=NA12877_ch_T0001554;gene_name=ENSG00000288057;ID=NA12877_ch_T0001554;Name=ENSG00000288057
NA12877_chrY	CAT	exon	22129802	22130185	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001554;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_T0001554;transcript_name=NA12877_ch_T0001554;gene_name=ENSG00000288057;ID=exon:NA12877_ch_T0001554:0;Name=ENSG00000288057;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22130186	22135327	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001554;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_T0001554;transcript_name=NA12877_ch_T0001554;gene_name=ENSG00000288057;ID=intron:NA12877_ch_T0001554:0;Name=ENSG00000288057;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22135328	22135416	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001554;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_T0001554;transcript_name=NA12877_ch_T0001554;gene_name=ENSG00000288057;ID=exon:NA12877_ch_T0001554:1;Name=ENSG00000288057;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22135417	22155565	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001554;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_T0001554;transcript_name=NA12877_ch_T0001554;gene_name=ENSG00000288057;ID=intron:NA12877_ch_T0001554:1;Name=ENSG00000288057;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22155566	22155767	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=NA12877_ch_T0001554;gene_id=NA12877_ch_G0000503;Parent=NA12877_ch_T0001554;transcript_name=NA12877_ch_T0001554;gene_name=ENSG00000288057;ID=exon:NA12877_ch_T0001554:2;Name=ENSG00000288057;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22134619	22141167	.	-	.	source_gene_common_name=RBMY2TP;source_gene=ENSG00000237269.1;gene_id=NA12877_ch_G0000504;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2TP;gene_sources=liftoff;ID=NA12877_ch_G0000504;Name=RBMY2TP
NA12877_chrY	CAT	transcript	22134619	22141167	1000	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=NA12877_ch_T0001555;gene_id=NA12877_ch_G0000504;Parent=NA12877_ch_G0000504;transcript_name=NA12877_ch_T0001555;gene_name=RBMY2TP;ID=NA12877_ch_T0001555;Name=RBMY2TP
NA12877_chrY	CAT	exon	22134619	22134919	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=NA12877_ch_T0001555;gene_id=NA12877_ch_G0000504;Parent=NA12877_ch_T0001555;transcript_name=NA12877_ch_T0001555;gene_name=RBMY2TP;ID=exon:NA12877_ch_T0001555:0;Name=RBMY2TP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22134920	22135327	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=NA12877_ch_T0001555;gene_id=NA12877_ch_G0000504;Parent=NA12877_ch_T0001555;transcript_name=NA12877_ch_T0001555;gene_name=RBMY2TP;ID=intron:NA12877_ch_T0001555:0;Name=RBMY2TP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22135328	22135416	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=NA12877_ch_T0001555;gene_id=NA12877_ch_G0000504;Parent=NA12877_ch_T0001555;transcript_name=NA12877_ch_T0001555;gene_name=RBMY2TP;ID=exon:NA12877_ch_T0001555:1;Name=RBMY2TP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22135417	22135508	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=NA12877_ch_T0001555;gene_id=NA12877_ch_G0000504;Parent=NA12877_ch_T0001555;transcript_name=NA12877_ch_T0001555;gene_name=RBMY2TP;ID=intron:NA12877_ch_T0001555:1;Name=RBMY2TP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22135509	22135619	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=NA12877_ch_T0001555;gene_id=NA12877_ch_G0000504;Parent=NA12877_ch_T0001555;transcript_name=NA12877_ch_T0001555;gene_name=RBMY2TP;ID=exon:NA12877_ch_T0001555:2;Name=RBMY2TP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22135620	22136505	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=NA12877_ch_T0001555;gene_id=NA12877_ch_G0000504;Parent=NA12877_ch_T0001555;transcript_name=NA12877_ch_T0001555;gene_name=RBMY2TP;ID=intron:NA12877_ch_T0001555:2;Name=RBMY2TP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22136506	22136620	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=NA12877_ch_T0001555;gene_id=NA12877_ch_G0000504;Parent=NA12877_ch_T0001555;transcript_name=NA12877_ch_T0001555;gene_name=RBMY2TP;ID=exon:NA12877_ch_T0001555:3;Name=RBMY2TP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22136621	22138612	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=NA12877_ch_T0001555;gene_id=NA12877_ch_G0000504;Parent=NA12877_ch_T0001555;transcript_name=NA12877_ch_T0001555;gene_name=RBMY2TP;ID=intron:NA12877_ch_T0001555:3;Name=RBMY2TP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22138613	22138765	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=NA12877_ch_T0001555;gene_id=NA12877_ch_G0000504;Parent=NA12877_ch_T0001555;transcript_name=NA12877_ch_T0001555;gene_name=RBMY2TP;ID=exon:NA12877_ch_T0001555:4;Name=RBMY2TP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22138766	22140989	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=NA12877_ch_T0001555;gene_id=NA12877_ch_G0000504;Parent=NA12877_ch_T0001555;transcript_name=NA12877_ch_T0001555;gene_name=RBMY2TP;ID=intron:NA12877_ch_T0001555:4;Name=RBMY2TP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22140990	22141167	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=NA12877_ch_T0001555;gene_id=NA12877_ch_G0000504;Parent=NA12877_ch_T0001555;transcript_name=NA12877_ch_T0001555;gene_name=RBMY2TP;ID=exon:NA12877_ch_T0001555:5;Name=RBMY2TP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22172080	22174605	.	+	.	source_gene_common_name=TSPY14P;source_gene=ENSG00000169849.8;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;gene_id=NA12877_ch_G0000505;gene_biotype=unprocessed_pseudogene;gene_name=TSPY14P;gene_sources=liftoff;ID=NA12877_ch_G0000505;Name=TSPY14P
NA12877_chrY	CAT	transcript	22172080	22174605	1000	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=NA12877_ch_T0001556;gene_id=NA12877_ch_G0000505;Parent=NA12877_ch_G0000505;transcript_name=NA12877_ch_T0001556;gene_name=TSPY14P;ID=NA12877_ch_T0001556;Name=TSPY14P
NA12877_chrY	CAT	exon	22172080	22172553	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=NA12877_ch_T0001556;gene_id=NA12877_ch_G0000505;Parent=NA12877_ch_T0001556;transcript_name=NA12877_ch_T0001556;gene_name=TSPY14P;ID=exon:NA12877_ch_T0001556:0;Name=TSPY14P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22172554	22173162	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=NA12877_ch_T0001556;gene_id=NA12877_ch_G0000505;Parent=NA12877_ch_T0001556;transcript_name=NA12877_ch_T0001556;gene_name=TSPY14P;ID=intron:NA12877_ch_T0001556:0;Name=TSPY14P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22173163	22173240	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=NA12877_ch_T0001556;gene_id=NA12877_ch_G0000505;Parent=NA12877_ch_T0001556;transcript_name=NA12877_ch_T0001556;gene_name=TSPY14P;ID=exon:NA12877_ch_T0001556:1;Name=TSPY14P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22173241	22173368	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=NA12877_ch_T0001556;gene_id=NA12877_ch_G0000505;Parent=NA12877_ch_T0001556;transcript_name=NA12877_ch_T0001556;gene_name=TSPY14P;ID=intron:NA12877_ch_T0001556:1;Name=TSPY14P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22173369	22173480	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=NA12877_ch_T0001556;gene_id=NA12877_ch_G0000505;Parent=NA12877_ch_T0001556;transcript_name=NA12877_ch_T0001556;gene_name=TSPY14P;ID=exon:NA12877_ch_T0001556:2;Name=TSPY14P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22173481	22173579	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=NA12877_ch_T0001556;gene_id=NA12877_ch_G0000505;Parent=NA12877_ch_T0001556;transcript_name=NA12877_ch_T0001556;gene_name=TSPY14P;ID=intron:NA12877_ch_T0001556:2;Name=TSPY14P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22173580	22173725	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=NA12877_ch_T0001556;gene_id=NA12877_ch_G0000505;Parent=NA12877_ch_T0001556;transcript_name=NA12877_ch_T0001556;gene_name=TSPY14P;ID=exon:NA12877_ch_T0001556:3;Name=TSPY14P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22173726	22173833	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=NA12877_ch_T0001556;gene_id=NA12877_ch_G0000505;Parent=NA12877_ch_T0001556;transcript_name=NA12877_ch_T0001556;gene_name=TSPY14P;ID=intron:NA12877_ch_T0001556:3;Name=TSPY14P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22173834	22173915	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=NA12877_ch_T0001556;gene_id=NA12877_ch_G0000505;Parent=NA12877_ch_T0001556;transcript_name=NA12877_ch_T0001556;gene_name=TSPY14P;ID=exon:NA12877_ch_T0001556:4;Name=TSPY14P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22173916	22174582	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=NA12877_ch_T0001556;gene_id=NA12877_ch_G0000505;Parent=NA12877_ch_T0001556;transcript_name=NA12877_ch_T0001556;gene_name=TSPY14P;ID=intron:NA12877_ch_T0001556:4;Name=TSPY14P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22174583	22174605	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=NA12877_ch_T0001556;gene_id=NA12877_ch_G0000505;Parent=NA12877_ch_T0001556;transcript_name=NA12877_ch_T0001556;gene_name=TSPY14P;ID=exon:NA12877_ch_T0001556:5;Name=TSPY14P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22197441	22205889	.	+	.	source_gene_common_name=RBMY1HP;source_gene=ENSG00000169811.8;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;gene_id=NA12877_ch_G0000506;gene_biotype=unprocessed_pseudogene;gene_name=RBMY1HP;gene_sources=liftoff;ID=NA12877_ch_G0000506;Name=RBMY1HP
NA12877_chrY	CAT	transcript	22197441	22205889	1000	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_G0000506;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=NA12877_ch_T0001557;Name=RBMY1HP
NA12877_chrY	CAT	exon	22197441	22197618	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=exon:NA12877_ch_T0001557:0;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22197619	22199531	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=intron:NA12877_ch_T0001557:0;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22199532	22199684	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=exon:NA12877_ch_T0001557:1;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22199685	22201694	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=intron:NA12877_ch_T0001557:1;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22201695	22201809	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=exon:NA12877_ch_T0001557:2;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22201810	22202764	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=intron:NA12877_ch_T0001557:2;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22202765	22202875	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=exon:NA12877_ch_T0001557:3;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22202876	22203316	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=intron:NA12877_ch_T0001557:3;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22203317	22203427	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=exon:NA12877_ch_T0001557:4;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22203428	22203861	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=intron:NA12877_ch_T0001557:4;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22203862	22203972	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=exon:NA12877_ch_T0001557:5;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22203973	22204405	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=intron:NA12877_ch_T0001557:5;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22204406	22204516	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=exon:NA12877_ch_T0001557:6;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22204517	22204893	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=intron:NA12877_ch_T0001557:6;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22204894	22205004	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=exon:NA12877_ch_T0001557:7;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22205005	22205090	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=intron:NA12877_ch_T0001557:7;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22205091	22205179	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=exon:NA12877_ch_T0001557:8;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22205180	22205590	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=intron:NA12877_ch_T0001557:8;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22205591	22205889	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=NA12877_ch_T0001557;gene_id=NA12877_ch_G0000506;Parent=NA12877_ch_T0001557;transcript_name=NA12877_ch_T0001557;gene_name=RBMY1HP;ID=exon:NA12877_ch_T0001557:9;Name=RBMY1HP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22212220	22214391	.	-	.	source_gene_common_name=ENSG00000242393;source_gene=ENSG00000242393.1;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;gene_id=NA12877_ch_G0000507;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000242393;gene_sources=liftoff;ID=NA12877_ch_G0000507;Name=ENSG00000242393
NA12877_chrY	CAT	transcript	22212220	22214391	1000	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=NA12877_ch_T0001558;gene_id=NA12877_ch_G0000507;Parent=NA12877_ch_G0000507;transcript_name=NA12877_ch_T0001558;gene_name=ENSG00000242393;ID=NA12877_ch_T0001558;Name=ENSG00000242393
NA12877_chrY	CAT	exon	22212220	22212267	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=NA12877_ch_T0001558;gene_id=NA12877_ch_G0000507;Parent=NA12877_ch_T0001558;transcript_name=NA12877_ch_T0001558;gene_name=ENSG00000242393;ID=exon:NA12877_ch_T0001558:0;Name=ENSG00000242393;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22212268	22212384	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=NA12877_ch_T0001558;gene_id=NA12877_ch_G0000507;Parent=NA12877_ch_T0001558;transcript_name=NA12877_ch_T0001558;gene_name=ENSG00000242393;ID=intron:NA12877_ch_T0001558:0;Name=ENSG00000242393;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22212385	22212530	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=NA12877_ch_T0001558;gene_id=NA12877_ch_G0000507;Parent=NA12877_ch_T0001558;transcript_name=NA12877_ch_T0001558;gene_name=ENSG00000242393;ID=exon:NA12877_ch_T0001558:1;Name=ENSG00000242393;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22212531	22212616	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=NA12877_ch_T0001558;gene_id=NA12877_ch_G0000507;Parent=NA12877_ch_T0001558;transcript_name=NA12877_ch_T0001558;gene_name=ENSG00000242393;ID=intron:NA12877_ch_T0001558:1;Name=ENSG00000242393;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22212617	22212680	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=NA12877_ch_T0001558;gene_id=NA12877_ch_G0000507;Parent=NA12877_ch_T0001558;transcript_name=NA12877_ch_T0001558;gene_name=ENSG00000242393;ID=exon:NA12877_ch_T0001558:2;Name=ENSG00000242393;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22212681	22212943	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=NA12877_ch_T0001558;gene_id=NA12877_ch_G0000507;Parent=NA12877_ch_T0001558;transcript_name=NA12877_ch_T0001558;gene_name=ENSG00000242393;ID=intron:NA12877_ch_T0001558:2;Name=ENSG00000242393;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22212944	22213009	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=NA12877_ch_T0001558;gene_id=NA12877_ch_G0000507;Parent=NA12877_ch_T0001558;transcript_name=NA12877_ch_T0001558;gene_name=ENSG00000242393;ID=exon:NA12877_ch_T0001558:3;Name=ENSG00000242393;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22213010	22213998	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=NA12877_ch_T0001558;gene_id=NA12877_ch_G0000507;Parent=NA12877_ch_T0001558;transcript_name=NA12877_ch_T0001558;gene_name=ENSG00000242393;ID=intron:NA12877_ch_T0001558:3;Name=ENSG00000242393;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22213999	22214391	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=NA12877_ch_T0001558;gene_id=NA12877_ch_G0000507;Parent=NA12877_ch_T0001558;transcript_name=NA12877_ch_T0001558;gene_name=ENSG00000242393;ID=exon:NA12877_ch_T0001558:4;Name=ENSG00000242393;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22215259	22253251	.	+	.	source_gene_common_name=RBMY1B;source_gene=ENSG00000242875.7;alternative_source_transcripts=ENST00000383020.7;gene_id=NA12877_ch_G0000508;gene_biotype=protein_coding;gene_name=RBMY1B;gene_sources=liftoff,transMap_pairwise;ID=NA12877_ch_G0000508;Name=RBMY1B
NA12877_chrY	CAT	transcript	22215259	22229711	100	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_G0000508;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=NA12877_ch_T0001559;Name=RBMY1B
NA12877_chrY	CAT	exon	22215259	22215406	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001559:0;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22215407	22217267	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001559:0;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22217268	22217380	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001559:1;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22217272	22217380	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001559:0;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22217272	22217274	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=start_codon:NA12877_ch_T0001559;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22217381	22217858	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001559:1;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22217859	22217962	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001559:2;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22217859	22217962	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001559:1;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22217963	22220981	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001559:2;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22220982	22221159	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001559:3;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22220982	22221159	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001559:2;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22221160	22223074	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001559:3;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22223075	22223227	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001559:4;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22223075	22223227	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001559:3;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22223228	22225237	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001559:4;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22225238	22225352	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001559:5;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22225238	22225352	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001559:4;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22225353	22226307	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001559:5;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22226308	22226418	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001559:6;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22226308	22226418	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001559:5;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22226419	22226859	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001559:6;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22226860	22226970	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001559:7;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22226860	22226970	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001559:6;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22226971	22227404	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001559:7;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22227405	22227515	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001559:8;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22227405	22227515	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001559:7;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22227516	22228436	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001559:8;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22228437	22228547	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001559:9;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22228437	22228547	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001559:8;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22228548	22228634	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001559:9;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22228635	22228723	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001559:10;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22228635	22228723	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001559:9;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22228724	22229134	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001559:10;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22229135	22229711	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001559:11;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22229135	22229433	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001559:10;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22229431	22229433	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7;transcript_id=NA12877_ch_T0001559;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001559;transcript_name=NA12877_ch_T0001559;gene_name=RBMY1B;ID=stop_codon:NA12877_ch_T0001559;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22215259	22253251	9980	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_G0000508;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=NA12877_ch_T0001560;Name=RBMY1B
NA12877_chrY	CAT	exon	22215259	22215406	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001560:0;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22215407	22217267	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001560:0;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22217268	22217380	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001560:1;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22217272	22217380	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001560:0;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22217272	22217274	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=start_codon:NA12877_ch_T0001560;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22217381	22217858	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001560:1;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22217859	22217962	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001560:2;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22217859	22217962	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001560:1;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22217963	22220981	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001560:2;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22220982	22221159	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001560:3;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22220982	22221159	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001560:2;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22221160	22246614	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001560:3;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22246615	22246767	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001560:4;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22246615	22246767	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001560:3;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22246768	22248777	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001560:4;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22248778	22248892	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001560:5;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22248778	22248892	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001560:4;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22248893	22249847	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001560:5;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22249848	22249958	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001560:6;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22249848	22249958	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001560:5;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22249959	22250399	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001560:6;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22250400	22250510	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001560:7;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22250400	22250510	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001560:6;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22250511	22250944	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001560:7;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22250945	22251055	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001560:8;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22250945	22251055	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001560:7;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22251056	22251976	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001560:8;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22251977	22252087	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001560:9;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22251977	22252087	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001560:8;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22252088	22252174	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001560:9;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22252175	22252263	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001560:10;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22252175	22252263	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001560:9;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22252264	22252674	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001560:10;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22252675	22253251	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001560:11;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22252675	22252973	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001560:10;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22252971	22252973	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000383020.7;transcript_score=299.866;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001560;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001560;transcript_name=NA12877_ch_T0001560;gene_name=RBMY1B;ID=stop_codon:NA12877_ch_T0001560;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22215284	22229711	1000	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_G0000508;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=NA12877_ch_T0001561;Name=RBMY1B
NA12877_chrY	CAT	exon	22215284	22215406	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001561:0;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22215407	22217267	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001561:0;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22217268	22217380	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001561:1;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22217272	22217380	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001561:0;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22217272	22217274	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=start_codon:NA12877_ch_T0001561;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22217381	22217858	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001561:1;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22217859	22217962	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001561:2;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22217859	22217962	.	+	2	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001561:1;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22217963	22223074	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001561:2;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22223075	22223227	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001561:3;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22223075	22223107	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001561:2;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22223105	22223107	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=stop_codon:NA12877_ch_T0001561;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22223228	22225237	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001561:3;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22225238	22225352	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001561:4;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22225353	22226307	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001561:4;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22226308	22226418	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001561:5;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22226419	22226859	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001561:5;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22226860	22226970	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001561:6;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22226971	22227404	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001561:6;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22227405	22227515	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001561:7;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22227516	22228436	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001561:7;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22228437	22228547	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001561:8;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22228548	22228634	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001561:8;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22228635	22228723	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001561:9;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22228724	22229134	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001561:9;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22229135	22229711	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7;transcript_id=NA12877_ch_T0001561;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001561;transcript_name=NA12877_ch_T0001561;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001561:10;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22215284	22253251	1000	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_G0000508;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=NA12877_ch_T0001562;Name=RBMY1B
NA12877_chrY	CAT	exon	22215284	22215406	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001562:0;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22215407	22217267	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001562:0;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22217268	22217380	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001562:1;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22217272	22217380	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001562:0;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22217272	22217274	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=start_codon:NA12877_ch_T0001562;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22217381	22217858	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001562:1;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22217859	22217962	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001562:2;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22217859	22217962	.	+	2	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001562:1;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22217963	22246614	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001562:2;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22246615	22246767	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001562:3;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22246615	22246647	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=CDS:NA12877_ch_T0001562:2;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22246645	22246647	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=stop_codon:NA12877_ch_T0001562;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22246768	22248777	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001562:3;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22248778	22248892	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001562:4;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22248893	22249847	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001562:4;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22249848	22249958	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001562:5;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22249959	22250399	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001562:5;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22250400	22250510	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001562:6;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22250511	22250944	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001562:6;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22250945	22251055	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001562:7;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22251056	22251976	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001562:7;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22251977	22252087	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001562:8;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22252088	22252174	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001562:8;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22252175	22252263	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001562:9;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22252264	22252674	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=intron:NA12877_ch_T0001562:9;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22252675	22253251	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=NA12877_ch_T0001562;gene_id=NA12877_ch_G0000508;Parent=NA12877_ch_T0001562;transcript_name=NA12877_ch_T0001562;gene_name=RBMY1B;ID=exon:NA12877_ch_T0001562:10;Name=RBMY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22235764	22237935	.	-	.	source_gene_common_name=ENSG00000228257;source_gene=ENSG00000228257.1;alternative_source_transcripts=ENST00000452426.1;gene_id=NA12877_ch_G0000509;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000228257;gene_sources=liftoff;ID=NA12877_ch_G0000509;Name=ENSG00000228257
NA12877_chrY	CAT	transcript	22235764	22237935	1000	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001563;gene_id=NA12877_ch_G0000509;Parent=NA12877_ch_G0000509;transcript_name=NA12877_ch_T0001563;gene_name=ENSG00000228257;ID=NA12877_ch_T0001563;Name=ENSG00000228257
NA12877_chrY	CAT	exon	22235764	22235811	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001563;gene_id=NA12877_ch_G0000509;Parent=NA12877_ch_T0001563;transcript_name=NA12877_ch_T0001563;gene_name=ENSG00000228257;ID=exon:NA12877_ch_T0001563:0;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22235812	22235928	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001563;gene_id=NA12877_ch_G0000509;Parent=NA12877_ch_T0001563;transcript_name=NA12877_ch_T0001563;gene_name=ENSG00000228257;ID=intron:NA12877_ch_T0001563:0;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22235929	22236074	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001563;gene_id=NA12877_ch_G0000509;Parent=NA12877_ch_T0001563;transcript_name=NA12877_ch_T0001563;gene_name=ENSG00000228257;ID=exon:NA12877_ch_T0001563:1;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22236075	22236160	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001563;gene_id=NA12877_ch_G0000509;Parent=NA12877_ch_T0001563;transcript_name=NA12877_ch_T0001563;gene_name=ENSG00000228257;ID=intron:NA12877_ch_T0001563:1;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22236161	22236224	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001563;gene_id=NA12877_ch_G0000509;Parent=NA12877_ch_T0001563;transcript_name=NA12877_ch_T0001563;gene_name=ENSG00000228257;ID=exon:NA12877_ch_T0001563:2;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22236225	22236487	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001563;gene_id=NA12877_ch_G0000509;Parent=NA12877_ch_T0001563;transcript_name=NA12877_ch_T0001563;gene_name=ENSG00000228257;ID=intron:NA12877_ch_T0001563:2;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22236488	22236553	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001563;gene_id=NA12877_ch_G0000509;Parent=NA12877_ch_T0001563;transcript_name=NA12877_ch_T0001563;gene_name=ENSG00000228257;ID=exon:NA12877_ch_T0001563:3;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22236554	22237538	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001563;gene_id=NA12877_ch_G0000509;Parent=NA12877_ch_T0001563;transcript_name=NA12877_ch_T0001563;gene_name=ENSG00000228257;ID=intron:NA12877_ch_T0001563:3;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22237539	22237935	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001563;gene_id=NA12877_ch_G0000509;Parent=NA12877_ch_T0001563;transcript_name=NA12877_ch_T0001563;gene_name=ENSG00000228257;ID=exon:NA12877_ch_T0001563:4;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22259304	22261475	.	-	.	source_gene_common_name=ENSG00000228257;source_gene=ENSG00000228257.1;alternative_source_transcripts=ENST00000452426.1;gene_id=NA12877_ch_G0000510;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000228257;gene_sources=liftoff;ID=NA12877_ch_G0000510;Name=ENSG00000228257
NA12877_chrY	CAT	transcript	22259304	22261475	1000	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001564;gene_id=NA12877_ch_G0000510;Parent=NA12877_ch_G0000510;transcript_name=NA12877_ch_T0001564;gene_name=ENSG00000228257;ID=NA12877_ch_T0001564;Name=ENSG00000228257
NA12877_chrY	CAT	exon	22259304	22259351	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001564;gene_id=NA12877_ch_G0000510;Parent=NA12877_ch_T0001564;transcript_name=NA12877_ch_T0001564;gene_name=ENSG00000228257;ID=exon:NA12877_ch_T0001564:0;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22259352	22259468	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001564;gene_id=NA12877_ch_G0000510;Parent=NA12877_ch_T0001564;transcript_name=NA12877_ch_T0001564;gene_name=ENSG00000228257;ID=intron:NA12877_ch_T0001564:0;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22259469	22259614	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001564;gene_id=NA12877_ch_G0000510;Parent=NA12877_ch_T0001564;transcript_name=NA12877_ch_T0001564;gene_name=ENSG00000228257;ID=exon:NA12877_ch_T0001564:1;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22259615	22259700	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001564;gene_id=NA12877_ch_G0000510;Parent=NA12877_ch_T0001564;transcript_name=NA12877_ch_T0001564;gene_name=ENSG00000228257;ID=intron:NA12877_ch_T0001564:1;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22259701	22259764	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001564;gene_id=NA12877_ch_G0000510;Parent=NA12877_ch_T0001564;transcript_name=NA12877_ch_T0001564;gene_name=ENSG00000228257;ID=exon:NA12877_ch_T0001564:2;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22259765	22260027	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001564;gene_id=NA12877_ch_G0000510;Parent=NA12877_ch_T0001564;transcript_name=NA12877_ch_T0001564;gene_name=ENSG00000228257;ID=intron:NA12877_ch_T0001564:2;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22260028	22260093	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001564;gene_id=NA12877_ch_G0000510;Parent=NA12877_ch_T0001564;transcript_name=NA12877_ch_T0001564;gene_name=ENSG00000228257;ID=exon:NA12877_ch_T0001564:3;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22260094	22261078	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001564;gene_id=NA12877_ch_G0000510;Parent=NA12877_ch_T0001564;transcript_name=NA12877_ch_T0001564;gene_name=ENSG00000228257;ID=intron:NA12877_ch_T0001564:3;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22261079	22261475	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=NA12877_ch_T0001564;gene_id=NA12877_ch_G0000510;Parent=NA12877_ch_T0001564;transcript_name=NA12877_ch_T0001564;gene_name=ENSG00000228257;ID=exon:NA12877_ch_T0001564:4;Name=ENSG00000228257;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22262343	22276791	.	+	.	source_gene_common_name=RBMY1D;source_gene=ENSG00000244395.6;alternative_source_transcripts=ENST00000382707.6;gene_id=NA12877_ch_G0000511;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff;ID=NA12877_ch_G0000511;Name=RBMY1D
NA12877_chrY	CAT	transcript	22262343	22276791	100	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_G0000511;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=NA12877_ch_T0001565;Name=RBMY1D
NA12877_chrY	CAT	exon	22262343	22262490	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001565:0;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22262491	22264351	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001565:0;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22264352	22264464	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001565:1;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22264356	22264464	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001565:0;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22264356	22264358	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=start_codon:NA12877_ch_T0001565;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22264465	22264938	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001565:1;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22264939	22265042	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001565:2;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22264939	22265042	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001565:1;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22265043	22268061	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001565:2;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22268062	22268239	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001565:3;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22268062	22268239	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001565:2;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22268240	22270154	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001565:3;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22270155	22270307	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001565:4;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22270155	22270307	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001565:3;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22270308	22272317	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001565:4;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22272318	22272432	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001565:5;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22272318	22272432	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001565:4;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22272433	22273387	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001565:5;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22273388	22273498	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001565:6;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22273388	22273498	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001565:5;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22273499	22273939	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001565:6;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22273940	22274050	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001565:7;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22273940	22274050	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001565:6;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22274051	22274484	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001565:7;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22274485	22274595	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001565:8;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22274485	22274595	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001565:7;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22274596	22275516	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001565:8;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22275517	22275627	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001565:9;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22275517	22275627	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001565:8;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22275628	22275714	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001565:9;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22275715	22275803	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001565:10;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22275715	22275803	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001565:9;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22275804	22276214	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001565:10;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22276215	22276791	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001565:11;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22276215	22276513	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001565:10;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22276511	22276513	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6;transcript_id=NA12877_ch_T0001565;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001565;transcript_name=NA12877_ch_T0001565;gene_name=RBMY1D;ID=stop_codon:NA12877_ch_T0001565;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22262368	22276791	1000	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_G0000511;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=NA12877_ch_T0001566;Name=RBMY1D
NA12877_chrY	CAT	exon	22262368	22262490	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001566:0;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22262491	22264351	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001566:0;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22264352	22264464	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001566:1;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22264356	22264464	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001566:0;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22264356	22264358	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=start_codon:NA12877_ch_T0001566;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22264465	22264938	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001566:1;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22264939	22265042	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001566:2;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22264939	22265042	.	+	2	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001566:1;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22265043	22270154	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001566:2;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22270155	22270307	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001566:3;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22270155	22270187	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001566:2;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22270185	22270187	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=stop_codon:NA12877_ch_T0001566;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22270308	22272317	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001566:3;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22272318	22272432	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001566:4;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22272433	22273387	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001566:4;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22273388	22273498	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001566:5;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22273499	22273939	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001566:5;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22273940	22274050	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001566:6;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22274051	22274484	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001566:6;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22274485	22274595	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001566:7;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22274596	22275516	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001566:7;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22275517	22275627	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001566:8;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22275628	22275714	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001566:8;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22275715	22275803	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001566:9;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22275804	22276214	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001566:9;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22276215	22276791	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4;transcript_id=NA12877_ch_T0001566;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001566;transcript_name=NA12877_ch_T0001566;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001566:10;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22262430	22276559	100	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_G0000511;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=NA12877_ch_T0001567;Name=RBMY1D
NA12877_chrY	CAT	exon	22262430	22262490	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001567:0;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22262491	22264351	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001567:0;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22264352	22264464	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001567:1;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22264356	22264464	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001567:0;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22264356	22264358	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=start_codon:NA12877_ch_T0001567;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22264465	22264938	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001567:1;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22264939	22265042	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001567:2;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22264939	22265042	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001567:1;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22265043	22268061	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001567:2;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22268062	22268239	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001567:3;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22268062	22268239	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001567:2;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22268240	22270154	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001567:3;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22270155	22270307	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001567:4;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22270155	22270307	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001567:3;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22270308	22272317	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001567:4;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22272318	22272432	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001567:5;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22272318	22272432	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001567:4;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22272433	22273387	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001567:5;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22273388	22273498	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001567:6;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22273388	22273498	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001567:5;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22273499	22273939	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001567:6;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22273940	22274050	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001567:7;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22273940	22274050	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001567:6;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22274051	22274484	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001567:7;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22274485	22274595	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001567:8;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22274485	22274595	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001567:7;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22274596	22275714	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001567:8;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22275715	22275803	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001567:9;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22275715	22275803	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001567:8;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22275804	22276214	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=intron:NA12877_ch_T0001567:9;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22276215	22276559	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=exon:NA12877_ch_T0001567:10;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22276215	22276513	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=CDS:NA12877_ch_T0001567:9;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22276511	22276513	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=NA12877_ch_T0001567;gene_id=NA12877_ch_G0000511;Parent=NA12877_ch_T0001567;transcript_name=NA12877_ch_T0001567;gene_name=RBMY1D;ID=stop_codon:NA12877_ch_T0001567;Name=RBMY1D;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22283317	22285536	.	-	.	source_gene_common_name=ENSG00000229725;source_gene=ENSG00000229725.1;gene_id=NA12877_ch_G0000512;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000229725;gene_sources=liftoff;ID=NA12877_ch_G0000512;Name=ENSG00000229725
NA12877_chrY	CAT	transcript	22283317	22285536	1000	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=NA12877_ch_T0001568;gene_id=NA12877_ch_G0000512;Parent=NA12877_ch_G0000512;transcript_name=NA12877_ch_T0001568;gene_name=ENSG00000229725;ID=NA12877_ch_T0001568;Name=ENSG00000229725
NA12877_chrY	CAT	exon	22283317	22283366	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=NA12877_ch_T0001568;gene_id=NA12877_ch_G0000512;Parent=NA12877_ch_T0001568;transcript_name=NA12877_ch_T0001568;gene_name=ENSG00000229725;ID=exon:NA12877_ch_T0001568:0;Name=ENSG00000229725;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22283367	22283737	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=NA12877_ch_T0001568;gene_id=NA12877_ch_G0000512;Parent=NA12877_ch_T0001568;transcript_name=NA12877_ch_T0001568;gene_name=ENSG00000229725;ID=intron:NA12877_ch_T0001568:0;Name=ENSG00000229725;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22283738	22283905	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=NA12877_ch_T0001568;gene_id=NA12877_ch_G0000512;Parent=NA12877_ch_T0001568;transcript_name=NA12877_ch_T0001568;gene_name=ENSG00000229725;ID=exon:NA12877_ch_T0001568:1;Name=ENSG00000229725;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22283906	22285149	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=NA12877_ch_T0001568;gene_id=NA12877_ch_G0000512;Parent=NA12877_ch_T0001568;transcript_name=NA12877_ch_T0001568;gene_name=ENSG00000229725;ID=intron:NA12877_ch_T0001568:1;Name=ENSG00000229725;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22285150	22285536	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=NA12877_ch_T0001568;gene_id=NA12877_ch_G0000512;Parent=NA12877_ch_T0001568;transcript_name=NA12877_ch_T0001568;gene_name=ENSG00000229725;ID=exon:NA12877_ch_T0001568:2;Name=ENSG00000229725;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22292553	22332545	.	-	.	source_gene_common_name=TTTY13;source_gene=ENSG00000184991.3;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;gene_id=NA12877_ch_G0000513;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=NA12877_ch_G0000513;Name=TTTY13
NA12877_chrY	CAT	transcript	22292553	22332545	1000	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_G0000513;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=NA12877_ch_T0001569;Name=TTTY13
NA12877_chrY	CAT	exon	22292553	22293650	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=exon:NA12877_ch_T0001569:0;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22293651	22293794	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=intron:NA12877_ch_T0001569:0;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22293795	22293869	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=exon:NA12877_ch_T0001569:1;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22293870	22298458	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=intron:NA12877_ch_T0001569:1;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22298459	22298617	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=exon:NA12877_ch_T0001569:2;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22298618	22310981	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=intron:NA12877_ch_T0001569:2;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22310982	22311123	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=exon:NA12877_ch_T0001569:3;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22311124	22312243	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=intron:NA12877_ch_T0001569:3;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22312244	22312335	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=exon:NA12877_ch_T0001569:4;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22312336	22314961	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=intron:NA12877_ch_T0001569:4;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22314962	22315123	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=exon:NA12877_ch_T0001569:5;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22315124	22332331	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=intron:NA12877_ch_T0001569:5;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22332332	22332545	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=NA12877_ch_T0001569;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001569;transcript_name=NA12877_ch_T0001569;gene_name=TTTY13;ID=exon:NA12877_ch_T0001569:6;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22311061	22322127	1000	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=NA12877_ch_T0001570;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_G0000513;transcript_name=NA12877_ch_T0001570;gene_name=TTTY13;ID=NA12877_ch_T0001570;Name=TTTY13
NA12877_chrY	CAT	exon	22311061	22311123	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=NA12877_ch_T0001570;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001570;transcript_name=NA12877_ch_T0001570;gene_name=TTTY13;ID=exon:NA12877_ch_T0001570:0;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22311124	22312243	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=NA12877_ch_T0001570;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001570;transcript_name=NA12877_ch_T0001570;gene_name=TTTY13;ID=intron:NA12877_ch_T0001570:0;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22312244	22312335	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=NA12877_ch_T0001570;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001570;transcript_name=NA12877_ch_T0001570;gene_name=TTTY13;ID=exon:NA12877_ch_T0001570:1;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22312336	22314961	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=NA12877_ch_T0001570;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001570;transcript_name=NA12877_ch_T0001570;gene_name=TTTY13;ID=intron:NA12877_ch_T0001570:1;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22314962	22315123	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=NA12877_ch_T0001570;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001570;transcript_name=NA12877_ch_T0001570;gene_name=TTTY13;ID=exon:NA12877_ch_T0001570:2;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22315124	22316732	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=NA12877_ch_T0001570;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001570;transcript_name=NA12877_ch_T0001570;gene_name=TTTY13;ID=intron:NA12877_ch_T0001570:2;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22316733	22316831	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=NA12877_ch_T0001570;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001570;transcript_name=NA12877_ch_T0001570;gene_name=TTTY13;ID=exon:NA12877_ch_T0001570:3;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22316832	22317426	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=NA12877_ch_T0001570;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001570;transcript_name=NA12877_ch_T0001570;gene_name=TTTY13;ID=intron:NA12877_ch_T0001570:3;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22317427	22317588	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=NA12877_ch_T0001570;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001570;transcript_name=NA12877_ch_T0001570;gene_name=TTTY13;ID=exon:NA12877_ch_T0001570:4;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22317589	22322046	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=NA12877_ch_T0001570;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001570;transcript_name=NA12877_ch_T0001570;gene_name=TTTY13;ID=intron:NA12877_ch_T0001570:4;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22322047	22322127	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=NA12877_ch_T0001570;gene_id=NA12877_ch_G0000513;Parent=NA12877_ch_T0001570;transcript_name=NA12877_ch_T0001570;gene_name=TTTY13;ID=exon:NA12877_ch_T0001570:5;Name=TTTY13;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22359147	22359479	.	-	.	source_gene_common_name=ELOCP5;source_gene=ENSG00000271123.1;alternative_source_transcripts=ENST00000604924.1,ENST00000604924.1;gene_id=NA12877_ch_G0000514;gene_biotype=processed_pseudogene;gene_name=ELOCP5;gene_sources=liftoff;ID=NA12877_ch_G0000514;Name=ELOCP5
NA12877_chrY	CAT	transcript	22359147	22359479	1000	-	.	source_transcript=ENST00000604924.1;source_transcript_name=ELOCP5-201;source_gene=ENSG00000271123.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271123.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604924.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604924.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP5;alternative_source_transcripts=ENST00000604924.1,ENST00000604924.1;transcript_id=NA12877_ch_T0001571;gene_id=NA12877_ch_G0000514;Parent=NA12877_ch_G0000514;transcript_name=NA12877_ch_T0001571;gene_name=ELOCP5;ID=NA12877_ch_T0001571;Name=ELOCP5
NA12877_chrY	CAT	exon	22359147	22359479	.	-	.	source_transcript=ENST00000604924.1;source_transcript_name=ELOCP5-201;source_gene=ENSG00000271123.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271123.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604924.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604924.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP5;alternative_source_transcripts=ENST00000604924.1,ENST00000604924.1;transcript_id=NA12877_ch_T0001571;gene_id=NA12877_ch_G0000514;Parent=NA12877_ch_T0001571;transcript_name=NA12877_ch_T0001571;gene_name=ELOCP5;ID=exon:NA12877_ch_T0001571:0;Name=ELOCP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22364939	22366505	.	-	.	source_gene_common_name=CDY10P;source_gene=ENSG00000226042.1;alternative_source_transcripts=ENST00000452415.1,ENST00000452415.1;gene_id=NA12877_ch_G0000515;gene_biotype=unprocessed_pseudogene;gene_name=CDY10P;gene_sources=liftoff;ID=NA12877_ch_G0000515;Name=CDY10P
NA12877_chrY	CAT	transcript	22364939	22366505	1000	-	.	source_transcript=ENST00000452415.1;source_transcript_name=CDY10P-201;source_gene=ENSG00000226042.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226042.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452415.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452415.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY10P;alternative_source_transcripts=ENST00000452415.1,ENST00000452415.1;transcript_id=NA12877_ch_T0001572;gene_id=NA12877_ch_G0000515;Parent=NA12877_ch_G0000515;transcript_name=NA12877_ch_T0001572;gene_name=CDY10P;ID=NA12877_ch_T0001572;Name=CDY10P
NA12877_chrY	CAT	exon	22364939	22366505	.	-	.	source_transcript=ENST00000452415.1;source_transcript_name=CDY10P-201;source_gene=ENSG00000226042.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226042.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452415.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452415.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY10P;alternative_source_transcripts=ENST00000452415.1,ENST00000452415.1;transcript_id=NA12877_ch_T0001572;gene_id=NA12877_ch_G0000515;Parent=NA12877_ch_T0001572;transcript_name=NA12877_ch_T0001572;gene_name=CDY10P;ID=exon:NA12877_ch_T0001572:0;Name=CDY10P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22389390	22401767	.	+	.	source_gene_common_name=USP9YP3;source_gene=ENSG00000237023.1;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;gene_id=NA12877_ch_G0000516;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP3;gene_sources=liftoff;ID=NA12877_ch_G0000516;Name=USP9YP3
NA12877_chrY	CAT	transcript	22389390	22401767	1000	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=NA12877_ch_T0001573;gene_id=NA12877_ch_G0000516;Parent=NA12877_ch_G0000516;transcript_name=NA12877_ch_T0001573;gene_name=USP9YP3;ID=NA12877_ch_T0001573;Name=USP9YP3
NA12877_chrY	CAT	exon	22389390	22389606	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=NA12877_ch_T0001573;gene_id=NA12877_ch_G0000516;Parent=NA12877_ch_T0001573;transcript_name=NA12877_ch_T0001573;gene_name=USP9YP3;ID=exon:NA12877_ch_T0001573:0;Name=USP9YP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22389607	22392226	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=NA12877_ch_T0001573;gene_id=NA12877_ch_G0000516;Parent=NA12877_ch_T0001573;transcript_name=NA12877_ch_T0001573;gene_name=USP9YP3;ID=intron:NA12877_ch_T0001573:0;Name=USP9YP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22392227	22392441	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=NA12877_ch_T0001573;gene_id=NA12877_ch_G0000516;Parent=NA12877_ch_T0001573;transcript_name=NA12877_ch_T0001573;gene_name=USP9YP3;ID=exon:NA12877_ch_T0001573:1;Name=USP9YP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22392442	22394562	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=NA12877_ch_T0001573;gene_id=NA12877_ch_G0000516;Parent=NA12877_ch_T0001573;transcript_name=NA12877_ch_T0001573;gene_name=USP9YP3;ID=intron:NA12877_ch_T0001573:1;Name=USP9YP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22394563	22394740	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=NA12877_ch_T0001573;gene_id=NA12877_ch_G0000516;Parent=NA12877_ch_T0001573;transcript_name=NA12877_ch_T0001573;gene_name=USP9YP3;ID=exon:NA12877_ch_T0001573:2;Name=USP9YP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22394741	22397547	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=NA12877_ch_T0001573;gene_id=NA12877_ch_G0000516;Parent=NA12877_ch_T0001573;transcript_name=NA12877_ch_T0001573;gene_name=USP9YP3;ID=intron:NA12877_ch_T0001573:2;Name=USP9YP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22397548	22397674	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=NA12877_ch_T0001573;gene_id=NA12877_ch_G0000516;Parent=NA12877_ch_T0001573;transcript_name=NA12877_ch_T0001573;gene_name=USP9YP3;ID=exon:NA12877_ch_T0001573:3;Name=USP9YP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22397675	22400328	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=NA12877_ch_T0001573;gene_id=NA12877_ch_G0000516;Parent=NA12877_ch_T0001573;transcript_name=NA12877_ch_T0001573;gene_name=USP9YP3;ID=intron:NA12877_ch_T0001573:3;Name=USP9YP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22400329	22401232	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=NA12877_ch_T0001573;gene_id=NA12877_ch_G0000516;Parent=NA12877_ch_T0001573;transcript_name=NA12877_ch_T0001573;gene_name=USP9YP3;ID=exon:NA12877_ch_T0001573:4;Name=USP9YP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22401233	22401642	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=NA12877_ch_T0001573;gene_id=NA12877_ch_G0000516;Parent=NA12877_ch_T0001573;transcript_name=NA12877_ch_T0001573;gene_name=USP9YP3;ID=intron:NA12877_ch_T0001573:4;Name=USP9YP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22401643	22401767	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=NA12877_ch_T0001573;gene_id=NA12877_ch_G0000516;Parent=NA12877_ch_T0001573;transcript_name=NA12877_ch_T0001573;gene_name=USP9YP3;ID=exon:NA12877_ch_T0001573:5;Name=USP9YP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22405005	22408877	.	-	.	source_gene_common_name=USP9YP8;source_gene=ENSG00000229416.1;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;gene_id=NA12877_ch_G0000517;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP8;gene_sources=liftoff;ID=NA12877_ch_G0000517;Name=USP9YP8
NA12877_chrY	CAT	transcript	22405005	22408877	1000	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=NA12877_ch_T0001574;gene_id=NA12877_ch_G0000517;Parent=NA12877_ch_G0000517;transcript_name=NA12877_ch_T0001574;gene_name=USP9YP8;ID=NA12877_ch_T0001574;Name=USP9YP8
NA12877_chrY	CAT	exon	22405005	22405194	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=NA12877_ch_T0001574;gene_id=NA12877_ch_G0000517;Parent=NA12877_ch_T0001574;transcript_name=NA12877_ch_T0001574;gene_name=USP9YP8;ID=exon:NA12877_ch_T0001574:0;Name=USP9YP8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22405195	22406758	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=NA12877_ch_T0001574;gene_id=NA12877_ch_G0000517;Parent=NA12877_ch_T0001574;transcript_name=NA12877_ch_T0001574;gene_name=USP9YP8;ID=intron:NA12877_ch_T0001574:0;Name=USP9YP8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22406759	22406982	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=NA12877_ch_T0001574;gene_id=NA12877_ch_G0000517;Parent=NA12877_ch_T0001574;transcript_name=NA12877_ch_T0001574;gene_name=USP9YP8;ID=exon:NA12877_ch_T0001574:1;Name=USP9YP8;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22406983	22408791	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=NA12877_ch_T0001574;gene_id=NA12877_ch_G0000517;Parent=NA12877_ch_T0001574;transcript_name=NA12877_ch_T0001574;gene_name=USP9YP8;ID=intron:NA12877_ch_T0001574:1;Name=USP9YP8;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22408792	22408877	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=NA12877_ch_T0001574;gene_id=NA12877_ch_G0000517;Parent=NA12877_ch_T0001574;transcript_name=NA12877_ch_T0001574;gene_name=USP9YP8;ID=exon:NA12877_ch_T0001574:2;Name=USP9YP8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22424329	22425979	.	+	.	source_gene_common_name=CDY11P;source_gene=ENSG00000230029.1;alternative_source_transcripts=ENST00000447168.1,ENST00000447168.1;gene_id=NA12877_ch_G0000518;gene_biotype=unprocessed_pseudogene;gene_name=CDY11P;gene_sources=liftoff;ID=NA12877_ch_G0000518;Name=CDY11P
NA12877_chrY	CAT	transcript	22424329	22425979	1000	+	.	source_transcript=ENST00000447168.1;source_transcript_name=CDY11P-201;source_gene=ENSG00000230029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447168.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY11P;alternative_source_transcripts=ENST00000447168.1,ENST00000447168.1;transcript_id=NA12877_ch_T0001575;gene_id=NA12877_ch_G0000518;Parent=NA12877_ch_G0000518;transcript_name=NA12877_ch_T0001575;gene_name=CDY11P;ID=NA12877_ch_T0001575;Name=CDY11P
NA12877_chrY	CAT	exon	22424329	22425979	.	+	.	source_transcript=ENST00000447168.1;source_transcript_name=CDY11P-201;source_gene=ENSG00000230029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY11P;alternative_source_transcripts=ENST00000447168.1,ENST00000447168.1;transcript_id=NA12877_ch_T0001575;gene_id=NA12877_ch_G0000518;Parent=NA12877_ch_T0001575;transcript_name=NA12877_ch_T0001575;gene_name=CDY11P;ID=exon:NA12877_ch_T0001575:0;Name=CDY11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22505353	22505992	.	-	.	source_gene_common_name=OFD1P16Y;source_gene=ENSG00000277519.1;alternative_source_transcripts=ENST00000620993.1,ENST00000620993.1;gene_id=NA12877_ch_G0000519;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P16Y;gene_sources=liftoff;ID=NA12877_ch_G0000519;Name=OFD1P16Y
NA12877_chrY	CAT	transcript	22505353	22505992	1000	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1,ENST00000620993.1;transcript_id=NA12877_ch_T0001576;gene_id=NA12877_ch_G0000519;Parent=NA12877_ch_G0000519;transcript_name=NA12877_ch_T0001576;gene_name=OFD1P16Y;ID=NA12877_ch_T0001576;Name=OFD1P16Y
NA12877_chrY	CAT	exon	22505353	22505529	.	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1,ENST00000620993.1;transcript_id=NA12877_ch_T0001576;gene_id=NA12877_ch_G0000519;Parent=NA12877_ch_T0001576;transcript_name=NA12877_ch_T0001576;gene_name=OFD1P16Y;ID=exon:NA12877_ch_T0001576:0;Name=OFD1P16Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22505530	22505851	.	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1,ENST00000620993.1;transcript_id=NA12877_ch_T0001576;gene_id=NA12877_ch_G0000519;Parent=NA12877_ch_T0001576;transcript_name=NA12877_ch_T0001576;gene_name=OFD1P16Y;ID=intron:NA12877_ch_T0001576:0;Name=OFD1P16Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22505852	22505992	.	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1,ENST00000620993.1;transcript_id=NA12877_ch_T0001576;gene_id=NA12877_ch_G0000519;Parent=NA12877_ch_T0001576;transcript_name=NA12877_ch_T0001576;gene_name=OFD1P16Y;ID=exon:NA12877_ch_T0001576:1;Name=OFD1P16Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22513034	22534495	.	+	.	source_gene_common_name=ENSG00000286187;source_gene=ENSG00000286187.2;alternative_source_transcripts=ENST00000807569.1,ENST00000807569.1;gene_id=NA12877_ch_G0000520;gene_biotype=lncRNA;gene_name=ENSG00000286187;gene_sources=liftoff;ID=NA12877_ch_G0000520;Name=ENSG00000286187
NA12877_chrY	CAT	transcript	22513034	22526945	1000	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1,ENST00000807569.1;transcript_id=NA12877_ch_T0001577;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_G0000520;transcript_name=NA12877_ch_T0001577;gene_name=ENSG00000286187;ID=NA12877_ch_T0001577;Name=ENSG00000286187
NA12877_chrY	CAT	exon	22513034	22513352	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1,ENST00000807569.1;transcript_id=NA12877_ch_T0001577;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001577;transcript_name=NA12877_ch_T0001577;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001577:0;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22513353	22526453	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1,ENST00000807569.1;transcript_id=NA12877_ch_T0001577;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001577;transcript_name=NA12877_ch_T0001577;gene_name=ENSG00000286187;ID=intron:NA12877_ch_T0001577:0;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22526454	22526613	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1,ENST00000807569.1;transcript_id=NA12877_ch_T0001577;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001577;transcript_name=NA12877_ch_T0001577;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001577:1;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22526614	22526773	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1,ENST00000807569.1;transcript_id=NA12877_ch_T0001577;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001577;transcript_name=NA12877_ch_T0001577;gene_name=ENSG00000286187;ID=intron:NA12877_ch_T0001577:1;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22526774	22526945	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1,ENST00000807569.1;transcript_id=NA12877_ch_T0001577;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001577;transcript_name=NA12877_ch_T0001577;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001577:2;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22513065	22534495	1000	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_G0000520;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=NA12877_ch_T0001578;Name=ENSG00000286187
NA12877_chrY	CAT	exon	22513065	22513352	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001578:0;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22513353	22524975	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=intron:NA12877_ch_T0001578:0;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22524976	22525281	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001578:1;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22525282	22526453	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=intron:NA12877_ch_T0001578:1;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22526454	22526613	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001578:2;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22526614	22526773	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=intron:NA12877_ch_T0001578:2;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22526774	22528939	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001578:3;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22528940	22529122	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=intron:NA12877_ch_T0001578:3;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22529123	22529284	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001578:4;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22529285	22529937	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=intron:NA12877_ch_T0001578:4;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22529938	22531302	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001578:5;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22531303	22531589	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=intron:NA12877_ch_T0001578:5;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22531590	22534495	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2,ENST00000651708.2;transcript_id=NA12877_ch_T0001578;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001578;transcript_name=NA12877_ch_T0001578;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001578:6;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22524829	22526939	1000	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1,ENST00000807570.1;transcript_id=NA12877_ch_T0001579;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_G0000520;transcript_name=NA12877_ch_T0001579;gene_name=ENSG00000286187;ID=NA12877_ch_T0001579;Name=ENSG00000286187
NA12877_chrY	CAT	exon	22524829	22525281	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1,ENST00000807570.1;transcript_id=NA12877_ch_T0001579;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001579;transcript_name=NA12877_ch_T0001579;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001579:0;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22525282	22526453	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1,ENST00000807570.1;transcript_id=NA12877_ch_T0001579;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001579;transcript_name=NA12877_ch_T0001579;gene_name=ENSG00000286187;ID=intron:NA12877_ch_T0001579:0;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22526454	22526613	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1,ENST00000807570.1;transcript_id=NA12877_ch_T0001579;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001579;transcript_name=NA12877_ch_T0001579;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001579:1;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22526614	22526773	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1,ENST00000807570.1;transcript_id=NA12877_ch_T0001579;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001579;transcript_name=NA12877_ch_T0001579;gene_name=ENSG00000286187;ID=intron:NA12877_ch_T0001579:1;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22526774	22526939	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1,ENST00000807570.1;transcript_id=NA12877_ch_T0001579;gene_id=NA12877_ch_G0000520;Parent=NA12877_ch_T0001579;transcript_name=NA12877_ch_T0001579;gene_name=ENSG00000286187;ID=exon:NA12877_ch_T0001579:2;Name=ENSG00000286187;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22559109	22561328	.	+	.	source_gene_common_name=ENSG00000229725;source_gene=ENSG00000229725.1;alternative_source_transcripts=ENST00000414540.1,ENST00000414540.1;gene_id=NA12877_ch_G0000521;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000229725;gene_sources=liftoff;ID=NA12877_ch_G0000521;Name=ENSG00000229725
NA12877_chrY	CAT	transcript	22559109	22561328	1000	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1,ENST00000414540.1;transcript_id=NA12877_ch_T0001580;gene_id=NA12877_ch_G0000521;Parent=NA12877_ch_G0000521;transcript_name=NA12877_ch_T0001580;gene_name=ENSG00000229725;ID=NA12877_ch_T0001580;Name=ENSG00000229725
NA12877_chrY	CAT	exon	22559109	22559495	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1,ENST00000414540.1;transcript_id=NA12877_ch_T0001580;gene_id=NA12877_ch_G0000521;Parent=NA12877_ch_T0001580;transcript_name=NA12877_ch_T0001580;gene_name=ENSG00000229725;ID=exon:NA12877_ch_T0001580:0;Name=ENSG00000229725;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22559496	22560739	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1,ENST00000414540.1;transcript_id=NA12877_ch_T0001580;gene_id=NA12877_ch_G0000521;Parent=NA12877_ch_T0001580;transcript_name=NA12877_ch_T0001580;gene_name=ENSG00000229725;ID=intron:NA12877_ch_T0001580:0;Name=ENSG00000229725;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22560740	22560907	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1,ENST00000414540.1;transcript_id=NA12877_ch_T0001580;gene_id=NA12877_ch_G0000521;Parent=NA12877_ch_T0001580;transcript_name=NA12877_ch_T0001580;gene_name=ENSG00000229725;ID=exon:NA12877_ch_T0001580:1;Name=ENSG00000229725;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22560908	22561278	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1,ENST00000414540.1;transcript_id=NA12877_ch_T0001580;gene_id=NA12877_ch_G0000521;Parent=NA12877_ch_T0001580;transcript_name=NA12877_ch_T0001580;gene_name=ENSG00000229725;ID=intron:NA12877_ch_T0001580:1;Name=ENSG00000229725;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22561279	22561328	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1,ENST00000414540.1;transcript_id=NA12877_ch_T0001580;gene_id=NA12877_ch_G0000521;Parent=NA12877_ch_T0001580;transcript_name=NA12877_ch_T0001580;gene_name=ENSG00000229725;ID=exon:NA12877_ch_T0001580:2;Name=ENSG00000229725;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22567854	22582278	.	-	.	source_gene_common_name=RBMY1E;source_gene=ENSG00000242389.9;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;gene_id=NA12877_ch_G0000522;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff;ID=NA12877_ch_G0000522;Name=RBMY1E
NA12877_chrY	CAT	transcript	22567854	22582278	1000	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_G0000522;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=NA12877_ch_T0001581;Name=RBMY1E
NA12877_chrY	CAT	exon	22567854	22568430	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001581:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22568431	22568841	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001581:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22568842	22568930	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001581:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22568931	22569016	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001581:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22569017	22569127	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001581:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22569128	22570048	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001581:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22570049	22570159	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001581:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22570160	22570593	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001581:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22570594	22570704	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001581:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22570705	22571145	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001581:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22571146	22571256	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001581:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22571257	22572211	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001581:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22572212	22572326	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001581:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22572327	22574336	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001581:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22574337	22574489	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001581:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22574457	22574489	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001581:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22574457	22574459	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=stop_codon:NA12877_ch_T0001581;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22574490	22579601	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001581:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22579602	22579705	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001581:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22579602	22579705	.	-	2	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001581:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22579706	22580181	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001581:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22580182	22580294	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001581:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22580182	22580290	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001581:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22580288	22580290	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=start_codon:NA12877_ch_T0001581;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22580295	22582155	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001581:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22582156	22582278	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382653.6,ENST00000382653.6;transcript_id=NA12877_ch_T0001581;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001581;transcript_name=NA12877_ch_T0001581;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001581:10;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22567856	22582268	100	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_G0000522;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=NA12877_ch_T0001582;Name=RBMY1E
NA12877_chrY	CAT	exon	22567856	22568430	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001582:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22568132	22568430	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001582:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22568132	22568134	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=stop_codon:NA12877_ch_T0001582;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22568431	22568841	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001582:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22568842	22568930	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001582:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22568842	22568930	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001582:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22568931	22570048	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001582:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22570049	22570159	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001582:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22570049	22570159	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001582:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22570160	22570593	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001582:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22570594	22570704	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001582:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22570594	22570704	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001582:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22570705	22571145	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001582:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22571146	22571256	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001582:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22571146	22571256	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001582:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22571257	22572211	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001582:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22572212	22572326	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001582:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22572212	22572326	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001582:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22572327	22574336	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001582:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22574337	22574489	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001582:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22574337	22574489	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001582:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22574490	22576404	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001582:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22576405	22576582	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001582:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22576405	22576582	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001582:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22576583	22579601	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001582:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22579602	22579705	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001582:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22579602	22579705	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001582:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22579706	22580181	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001582:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22580182	22580294	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001582:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22580182	22580290	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001582:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22580288	22580290	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=start_codon:NA12877_ch_T0001582;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22580295	22582155	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001582:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22582156	22582268	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001582;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001582;transcript_name=NA12877_ch_T0001582;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001582:10;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22567858	22582268	100	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_G0000522;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=NA12877_ch_T0001583;Name=RBMY1E
NA12877_chrY	CAT	exon	22567858	22568430	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001583:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22568132	22568430	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001583:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22568132	22568134	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=stop_codon:NA12877_ch_T0001583;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22568431	22568841	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001583:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22568842	22568930	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001583:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22568842	22568930	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001583:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22568931	22569016	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001583:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22569017	22569127	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001583:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22569017	22569127	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001583:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22569128	22570048	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001583:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22570049	22570159	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001583:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22570049	22570159	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001583:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22570160	22570593	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001583:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22570594	22570704	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001583:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22570594	22570704	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001583:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22570705	22571145	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001583:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22571146	22571256	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001583:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22571146	22571256	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001583:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22571257	22572211	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001583:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22572212	22572326	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001583:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22572212	22572326	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001583:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22572327	22574336	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001583:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22574337	22574489	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001583:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22574337	22574489	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001583:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22574490	22576404	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001583:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22576405	22576582	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001583:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22576405	22576582	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001583:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22576583	22579601	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001583:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22579602	22579705	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001583:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22579602	22579705	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001583:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22579706	22580181	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001583:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22580182	22580294	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001583:10;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22580182	22580290	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001583:10;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22580288	22580290	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=start_codon:NA12877_ch_T0001583;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22580295	22582155	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001583:10;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22582156	22582268	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=NA12877_ch_T0001583;gene_id=NA12877_ch_G0000522;Parent=NA12877_ch_T0001583;transcript_name=NA12877_ch_T0001583;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001583:11;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22583171	22585336	.	+	.	source_gene_common_name=ENSG00000251618;source_gene=ENSG00000251618.1;alternative_source_transcripts=ENST00000509611.1,ENST00000509611.1;gene_id=NA12877_ch_G0000523;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000251618;gene_sources=liftoff;ID=NA12877_ch_G0000523;Name=ENSG00000251618
NA12877_chrY	CAT	transcript	22583171	22585336	1000	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1,ENST00000509611.1;transcript_id=NA12877_ch_T0001584;gene_id=NA12877_ch_G0000523;Parent=NA12877_ch_G0000523;transcript_name=NA12877_ch_T0001584;gene_name=ENSG00000251618;ID=NA12877_ch_T0001584;Name=ENSG00000251618
NA12877_chrY	CAT	exon	22583171	22583555	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1,ENST00000509611.1;transcript_id=NA12877_ch_T0001584;gene_id=NA12877_ch_G0000523;Parent=NA12877_ch_T0001584;transcript_name=NA12877_ch_T0001584;gene_name=ENSG00000251618;ID=exon:NA12877_ch_T0001584:0;Name=ENSG00000251618;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22583556	22584552	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1,ENST00000509611.1;transcript_id=NA12877_ch_T0001584;gene_id=NA12877_ch_G0000523;Parent=NA12877_ch_T0001584;transcript_name=NA12877_ch_T0001584;gene_name=ENSG00000251618;ID=intron:NA12877_ch_T0001584:0;Name=ENSG00000251618;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22584553	22584637	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1,ENST00000509611.1;transcript_id=NA12877_ch_T0001584;gene_id=NA12877_ch_G0000523;Parent=NA12877_ch_T0001584;transcript_name=NA12877_ch_T0001584;gene_name=ENSG00000251618;ID=exon:NA12877_ch_T0001584:1;Name=ENSG00000251618;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22584638	22584881	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1,ENST00000509611.1;transcript_id=NA12877_ch_T0001584;gene_id=NA12877_ch_G0000523;Parent=NA12877_ch_T0001584;transcript_name=NA12877_ch_T0001584;gene_name=ENSG00000251618;ID=intron:NA12877_ch_T0001584:1;Name=ENSG00000251618;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22584882	22584960	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1,ENST00000509611.1;transcript_id=NA12877_ch_T0001584;gene_id=NA12877_ch_G0000523;Parent=NA12877_ch_T0001584;transcript_name=NA12877_ch_T0001584;gene_name=ENSG00000251618;ID=exon:NA12877_ch_T0001584:2;Name=ENSG00000251618;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22584961	22585045	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1,ENST00000509611.1;transcript_id=NA12877_ch_T0001584;gene_id=NA12877_ch_G0000523;Parent=NA12877_ch_T0001584;transcript_name=NA12877_ch_T0001584;gene_name=ENSG00000251618;ID=intron:NA12877_ch_T0001584:2;Name=ENSG00000251618;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22585046	22585177	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1,ENST00000509611.1;transcript_id=NA12877_ch_T0001584;gene_id=NA12877_ch_G0000523;Parent=NA12877_ch_T0001584;transcript_name=NA12877_ch_T0001584;gene_name=ENSG00000251618;ID=exon:NA12877_ch_T0001584:3;Name=ENSG00000251618;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22585178	22585294	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1,ENST00000509611.1;transcript_id=NA12877_ch_T0001584;gene_id=NA12877_ch_G0000523;Parent=NA12877_ch_T0001584;transcript_name=NA12877_ch_T0001584;gene_name=ENSG00000251618;ID=intron:NA12877_ch_T0001584:3;Name=ENSG00000251618;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22585295	22585336	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1,ENST00000509611.1;transcript_id=NA12877_ch_T0001584;gene_id=NA12877_ch_G0000523;Parent=NA12877_ch_T0001584;transcript_name=NA12877_ch_T0001584;gene_name=ENSG00000251618;ID=exon:NA12877_ch_T0001584:4;Name=ENSG00000251618;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22591395	22605819	.	-	.	source_gene_common_name=RBMY1E;source_gene=ENSG00000242389.9;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;gene_id=NA12877_ch_G0000524;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff;ID=NA12877_ch_G0000524;Name=RBMY1E
NA12877_chrY	CAT	transcript	22591395	22605819	1000	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_G0000524;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=NA12877_ch_T0001585;Name=RBMY1E
NA12877_chrY	CAT	exon	22591395	22591971	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001585:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22591972	22592382	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001585:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22592383	22592471	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001585:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22592472	22592557	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001585:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22592558	22592668	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001585:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22592669	22593589	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001585:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22593590	22593700	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001585:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22593701	22594134	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001585:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22594135	22594245	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001585:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22594246	22594686	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001585:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22594687	22594797	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001585:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22594798	22595752	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001585:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22595753	22595867	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001585:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22595868	22597877	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001585:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22597878	22598030	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001585:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22597998	22598030	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001585:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22597998	22598000	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=stop_codon:NA12877_ch_T0001585;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22598031	22603142	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001585:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22603143	22603246	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001585:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22603143	22603246	.	-	2	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001585:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22603247	22603722	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001585:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22603723	22603835	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001585:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22603723	22603831	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001585:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22603829	22603831	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=start_codon:NA12877_ch_T0001585;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22603836	22605696	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001585:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22605697	22605819	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8,ENST00000358944.8;transcript_id=NA12877_ch_T0001585;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001585;transcript_name=NA12877_ch_T0001585;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001585:10;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22591397	22605809	100	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_G0000524;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=NA12877_ch_T0001586;Name=RBMY1E
NA12877_chrY	CAT	exon	22591397	22591971	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001586:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22591673	22591971	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001586:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22591673	22591675	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=stop_codon:NA12877_ch_T0001586;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22591972	22592382	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001586:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22592383	22592471	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001586:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22592383	22592471	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001586:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22592472	22593589	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001586:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22593590	22593700	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001586:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22593590	22593700	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001586:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22593701	22594134	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001586:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22594135	22594245	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001586:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22594135	22594245	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001586:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22594246	22594686	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001586:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22594687	22594797	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001586:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22594687	22594797	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001586:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22594798	22595752	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001586:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22595753	22595867	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001586:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22595753	22595867	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001586:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22595868	22597877	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001586:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22597878	22598030	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001586:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22597878	22598030	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001586:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22598031	22599945	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001586:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22599946	22600123	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001586:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22599946	22600123	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001586:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22600124	22603142	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001586:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22603143	22603246	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001586:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22603143	22603246	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001586:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22603247	22603722	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001586:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22603723	22603835	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001586:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22603723	22603831	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001586:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22603829	22603831	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=start_codon:NA12877_ch_T0001586;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22603836	22605696	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001586:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22605697	22605809	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5,ENST00000382658.5;transcript_id=NA12877_ch_T0001586;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001586;transcript_name=NA12877_ch_T0001586;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001586:10;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22591399	22605809	100	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_G0000524;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=NA12877_ch_T0001587;Name=RBMY1E
NA12877_chrY	CAT	exon	22591399	22591971	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001587:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22591673	22591971	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001587:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22591673	22591675	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=stop_codon:NA12877_ch_T0001587;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22591972	22592382	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001587:0;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22592383	22592471	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001587:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22592383	22592471	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001587:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22592472	22592557	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001587:1;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22592558	22592668	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001587:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22592558	22592668	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001587:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22592669	22593589	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001587:2;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22593590	22593700	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001587:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22593590	22593700	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001587:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22593701	22594134	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001587:3;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22594135	22594245	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001587:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22594135	22594245	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001587:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22594246	22594686	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001587:4;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22594687	22594797	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001587:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22594687	22594797	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001587:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22594798	22595752	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001587:5;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22595753	22595867	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001587:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22595753	22595867	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001587:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22595868	22597877	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001587:6;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22597878	22598030	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001587:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22597878	22598030	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001587:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22598031	22599945	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001587:7;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22599946	22600123	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001587:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22599946	22600123	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001587:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22600124	22603142	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001587:8;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22603143	22603246	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001587:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22603143	22603246	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001587:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22603247	22603722	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001587:9;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22603723	22603835	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001587:10;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22603723	22603831	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=CDS:NA12877_ch_T0001587:10;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22603829	22603831	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=start_codon:NA12877_ch_T0001587;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22603836	22605696	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=intron:NA12877_ch_T0001587:10;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22605697	22605809	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7,ENST00000382659.7;transcript_id=NA12877_ch_T0001587;gene_id=NA12877_ch_G0000524;Parent=NA12877_ch_T0001587;transcript_name=NA12877_ch_T0001587;gene_name=RBMY1E;ID=exon:NA12877_ch_T0001587:11;Name=RBMY1E;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22606712	22608883	.	+	.	source_gene_common_name=ENSG00000227444;source_gene=ENSG00000227444.1;alternative_source_transcripts=ENST00000426983.1;gene_id=NA12877_ch_G0000525;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000227444;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000525;Name=ENSG00000227444
NA12877_chrY	CAT	transcript	22606712	22608883	1000	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;alternative_source_transcripts=ENST00000426983.1;transcript_id=NA12877_ch_T0001588;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_G0000525;transcript_name=NA12877_ch_T0001588;gene_name=ENSG00000227444;ID=NA12877_ch_T0001588;Name=ENSG00000227444
NA12877_chrY	CAT	exon	22606712	22607105	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;alternative_source_transcripts=ENST00000426983.1;transcript_id=NA12877_ch_T0001588;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001588;transcript_name=NA12877_ch_T0001588;gene_name=ENSG00000227444;ID=exon:NA12877_ch_T0001588:0;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22607106	22608093	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;alternative_source_transcripts=ENST00000426983.1;transcript_id=NA12877_ch_T0001588;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001588;transcript_name=NA12877_ch_T0001588;gene_name=ENSG00000227444;ID=intron:NA12877_ch_T0001588:0;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22608094	22608178	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;alternative_source_transcripts=ENST00000426983.1;transcript_id=NA12877_ch_T0001588;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001588;transcript_name=NA12877_ch_T0001588;gene_name=ENSG00000227444;ID=exon:NA12877_ch_T0001588:1;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22608179	22608422	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;alternative_source_transcripts=ENST00000426983.1;transcript_id=NA12877_ch_T0001588;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001588;transcript_name=NA12877_ch_T0001588;gene_name=ENSG00000227444;ID=intron:NA12877_ch_T0001588:1;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22608423	22608718	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;alternative_source_transcripts=ENST00000426983.1;transcript_id=NA12877_ch_T0001588;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001588;transcript_name=NA12877_ch_T0001588;gene_name=ENSG00000227444;ID=exon:NA12877_ch_T0001588:2;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22608719	22608835	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;alternative_source_transcripts=ENST00000426983.1;transcript_id=NA12877_ch_T0001588;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001588;transcript_name=NA12877_ch_T0001588;gene_name=ENSG00000227444;ID=intron:NA12877_ch_T0001588:2;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22608836	22608883	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;alternative_source_transcripts=ENST00000426983.1;transcript_id=NA12877_ch_T0001588;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001588;transcript_name=NA12877_ch_T0001588;gene_name=ENSG00000227444;ID=exon:NA12877_ch_T0001588:3;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22606712	22608883	1000	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=NA12877_ch_T0001589;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_G0000525;transcript_name=NA12877_ch_T0001589;gene_name=ENSG00000227444;ID=NA12877_ch_T0001589;Name=ENSG00000227444
NA12877_chrY	CAT	exon	22606712	22607105	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=NA12877_ch_T0001589;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001589;transcript_name=NA12877_ch_T0001589;gene_name=ENSG00000227444;ID=exon:NA12877_ch_T0001589:0;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22607106	22608093	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=NA12877_ch_T0001589;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001589;transcript_name=NA12877_ch_T0001589;gene_name=ENSG00000227444;ID=intron:NA12877_ch_T0001589:0;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22608094	22608178	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=NA12877_ch_T0001589;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001589;transcript_name=NA12877_ch_T0001589;gene_name=ENSG00000227444;ID=exon:NA12877_ch_T0001589:1;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22608179	22608422	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=NA12877_ch_T0001589;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001589;transcript_name=NA12877_ch_T0001589;gene_name=ENSG00000227444;ID=intron:NA12877_ch_T0001589:1;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22608423	22608501	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=NA12877_ch_T0001589;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001589;transcript_name=NA12877_ch_T0001589;gene_name=ENSG00000227444;ID=exon:NA12877_ch_T0001589:2;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22608502	22608574	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=NA12877_ch_T0001589;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001589;transcript_name=NA12877_ch_T0001589;gene_name=ENSG00000227444;ID=intron:NA12877_ch_T0001589:2;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22608575	22608718	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=NA12877_ch_T0001589;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001589;transcript_name=NA12877_ch_T0001589;gene_name=ENSG00000227444;ID=exon:NA12877_ch_T0001589:3;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22608719	22608835	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=NA12877_ch_T0001589;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001589;transcript_name=NA12877_ch_T0001589;gene_name=ENSG00000227444;ID=intron:NA12877_ch_T0001589:3;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22608836	22608883	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=NA12877_ch_T0001589;gene_id=NA12877_ch_G0000525;Parent=NA12877_ch_T0001589;transcript_name=NA12877_ch_T0001589;gene_name=ENSG00000227444;ID=exon:NA12877_ch_T0001589:4;Name=ENSG00000227444;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22615298	22624927	.	-	.	source_gene_common_name=RBMY2AP;source_gene=ENSG00000226092.4;gene_id=NA12877_ch_G0000526;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2AP;gene_sources=liftoff;ID=NA12877_ch_G0000526;Name=RBMY2AP
NA12877_chrY	CAT	transcript	22615298	22624927	1000	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_G0000526;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=NA12877_ch_T0001590;Name=RBMY2AP
NA12877_chrY	CAT	exon	22615298	22615596	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=exon:NA12877_ch_T0001590:0;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22615597	22616017	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=intron:NA12877_ch_T0001590:0;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22616018	22616105	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=exon:NA12877_ch_T0001590:1;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22616106	22616187	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=intron:NA12877_ch_T0001590:1;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22616188	22616298	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=exon:NA12877_ch_T0001590:2;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22616299	22617167	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=intron:NA12877_ch_T0001590:2;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22617168	22617282	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=exon:NA12877_ch_T0001590:3;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22617283	22619289	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=intron:NA12877_ch_T0001590:3;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22619290	22619442	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=exon:NA12877_ch_T0001590:4;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22619443	22621377	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=intron:NA12877_ch_T0001590:4;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22621378	22621555	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=exon:NA12877_ch_T0001590:5;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22621556	22624261	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=intron:NA12877_ch_T0001590:5;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22624262	22624365	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=exon:NA12877_ch_T0001590:6;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22624366	22624818	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=intron:NA12877_ch_T0001590:6;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22624819	22624927	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=NA12877_ch_T0001590;gene_id=NA12877_ch_G0000526;Parent=NA12877_ch_T0001590;transcript_name=NA12877_ch_T0001590;gene_name=RBMY2AP;ID=exon:NA12877_ch_T0001590:7;Name=RBMY2AP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22617085	22626929	.	-	.	source_gene_common_name=ENSG00000295847;source_gene=ENSG00000295847.1;gene_id=NA12877_ch_G0000527;gene_biotype=lncRNA;gene_name=ENSG00000295847;gene_sources=liftoff;ID=NA12877_ch_G0000527;Name=ENSG00000295847
NA12877_chrY	CAT	transcript	22617085	22626929	1000	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_G0000527;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=NA12877_ch_T0001591;Name=ENSG00000295847
NA12877_chrY	CAT	exon	22617085	22617282	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001591:0;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22617283	22619289	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=intron:NA12877_ch_T0001591:0;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22619290	22619442	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001591:1;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22619443	22621377	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=intron:NA12877_ch_T0001591:1;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22621378	22621555	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001591:2;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22621556	22624261	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=intron:NA12877_ch_T0001591:2;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22624262	22624365	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001591:3;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22624366	22624818	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=intron:NA12877_ch_T0001591:3;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22624819	22624931	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001591:4;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22624932	22625945	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=intron:NA12877_ch_T0001591:4;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22625946	22626025	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001591:5;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22626026	22626779	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=intron:NA12877_ch_T0001591:5;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22626780	22626929	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001591;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001591;transcript_name=NA12877_ch_T0001591;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001591:6;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22618454	22626898	1000	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_G0000527;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=NA12877_ch_T0001592;Name=ENSG00000295847
NA12877_chrY	CAT	exon	22618454	22618711	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001592:0;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22618712	22619289	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=intron:NA12877_ch_T0001592:0;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22619290	22619442	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001592:1;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22619443	22621377	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=intron:NA12877_ch_T0001592:1;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22621378	22621555	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001592:2;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22621556	22624261	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=intron:NA12877_ch_T0001592:2;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22624262	22624365	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001592:3;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22624366	22624818	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=intron:NA12877_ch_T0001592:3;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22624819	22624931	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001592:4;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22624932	22625945	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=intron:NA12877_ch_T0001592:4;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22625946	22626025	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001592:5;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22626026	22626779	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=intron:NA12877_ch_T0001592:5;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22626780	22626898	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=NA12877_ch_T0001592;gene_id=NA12877_ch_G0000527;Parent=NA12877_ch_T0001592;transcript_name=NA12877_ch_T0001592;gene_name=ENSG00000295847;ID=exon:NA12877_ch_T0001592:6;Name=ENSG00000295847;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22627789	22629370	.	+	.	source_gene_common_name=ENSG00000237968;source_gene=ENSG00000237968.1;alternative_source_transcripts=ENST00000426526.1,ENST00000426526.1;gene_id=NA12877_ch_G0000528;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000237968;gene_sources=liftoff;ID=NA12877_ch_G0000528;Name=ENSG00000237968
NA12877_chrY	CAT	transcript	22627789	22629370	1000	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1,ENST00000426526.1;transcript_id=NA12877_ch_T0001593;gene_id=NA12877_ch_G0000528;Parent=NA12877_ch_G0000528;transcript_name=NA12877_ch_T0001593;gene_name=ENSG00000237968;ID=NA12877_ch_T0001593;Name=ENSG00000237968
NA12877_chrY	CAT	exon	22627789	22628120	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1,ENST00000426526.1;transcript_id=NA12877_ch_T0001593;gene_id=NA12877_ch_G0000528;Parent=NA12877_ch_T0001593;transcript_name=NA12877_ch_T0001593;gene_name=ENSG00000237968;ID=exon:NA12877_ch_T0001593:0;Name=ENSG00000237968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22628121	22628599	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1,ENST00000426526.1;transcript_id=NA12877_ch_T0001593;gene_id=NA12877_ch_G0000528;Parent=NA12877_ch_T0001593;transcript_name=NA12877_ch_T0001593;gene_name=ENSG00000237968;ID=intron:NA12877_ch_T0001593:0;Name=ENSG00000237968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22628600	22628638	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1,ENST00000426526.1;transcript_id=NA12877_ch_T0001593;gene_id=NA12877_ch_G0000528;Parent=NA12877_ch_T0001593;transcript_name=NA12877_ch_T0001593;gene_name=ENSG00000237968;ID=exon:NA12877_ch_T0001593:1;Name=ENSG00000237968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22628639	22628836	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1,ENST00000426526.1;transcript_id=NA12877_ch_T0001593;gene_id=NA12877_ch_G0000528;Parent=NA12877_ch_T0001593;transcript_name=NA12877_ch_T0001593;gene_name=ENSG00000237968;ID=intron:NA12877_ch_T0001593:1;Name=ENSG00000237968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22628837	22628946	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1,ENST00000426526.1;transcript_id=NA12877_ch_T0001593;gene_id=NA12877_ch_G0000528;Parent=NA12877_ch_T0001593;transcript_name=NA12877_ch_T0001593;gene_name=ENSG00000237968;ID=exon:NA12877_ch_T0001593:2;Name=ENSG00000237968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22628947	22629033	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1,ENST00000426526.1;transcript_id=NA12877_ch_T0001593;gene_id=NA12877_ch_G0000528;Parent=NA12877_ch_T0001593;transcript_name=NA12877_ch_T0001593;gene_name=ENSG00000237968;ID=intron:NA12877_ch_T0001593:2;Name=ENSG00000237968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22629034	22629177	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1,ENST00000426526.1;transcript_id=NA12877_ch_T0001593;gene_id=NA12877_ch_G0000528;Parent=NA12877_ch_T0001593;transcript_name=NA12877_ch_T0001593;gene_name=ENSG00000237968;ID=exon:NA12877_ch_T0001593:3;Name=ENSG00000237968;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22629178	22629294	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1,ENST00000426526.1;transcript_id=NA12877_ch_T0001593;gene_id=NA12877_ch_G0000528;Parent=NA12877_ch_T0001593;transcript_name=NA12877_ch_T0001593;gene_name=ENSG00000237968;ID=intron:NA12877_ch_T0001593:3;Name=ENSG00000237968;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22629295	22629370	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1,ENST00000426526.1;transcript_id=NA12877_ch_T0001593;gene_id=NA12877_ch_G0000528;Parent=NA12877_ch_T0001593;transcript_name=NA12877_ch_T0001593;gene_name=ENSG00000237968;ID=exon:NA12877_ch_T0001593:4;Name=ENSG00000237968;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22633144	22638590	.	-	.	source_gene_common_name=ENSG00000305658;source_gene=ENSG00000305658.1;gene_id=NA12877_ch_G0000529;gene_biotype=lncRNA;gene_name=ENSG00000305658;gene_sources=liftoff;ID=NA12877_ch_G0000529;Name=ENSG00000305658
NA12877_chrY	CAT	transcript	22633144	22638590	1000	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001594;gene_id=NA12877_ch_G0000529;Parent=NA12877_ch_G0000529;transcript_name=NA12877_ch_T0001594;gene_name=ENSG00000305658;ID=NA12877_ch_T0001594;Name=ENSG00000305658
NA12877_chrY	CAT	exon	22633144	22633848	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001594;gene_id=NA12877_ch_G0000529;Parent=NA12877_ch_T0001594;transcript_name=NA12877_ch_T0001594;gene_name=ENSG00000305658;ID=exon:NA12877_ch_T0001594:0;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22633849	22634212	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001594;gene_id=NA12877_ch_G0000529;Parent=NA12877_ch_T0001594;transcript_name=NA12877_ch_T0001594;gene_name=ENSG00000305658;ID=intron:NA12877_ch_T0001594:0;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22634213	22634339	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001594;gene_id=NA12877_ch_G0000529;Parent=NA12877_ch_T0001594;transcript_name=NA12877_ch_T0001594;gene_name=ENSG00000305658;ID=exon:NA12877_ch_T0001594:1;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22634340	22636208	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001594;gene_id=NA12877_ch_G0000529;Parent=NA12877_ch_T0001594;transcript_name=NA12877_ch_T0001594;gene_name=ENSG00000305658;ID=intron:NA12877_ch_T0001594:1;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22636209	22636342	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001594;gene_id=NA12877_ch_G0000529;Parent=NA12877_ch_T0001594;transcript_name=NA12877_ch_T0001594;gene_name=ENSG00000305658;ID=exon:NA12877_ch_T0001594:2;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22636343	22638251	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001594;gene_id=NA12877_ch_G0000529;Parent=NA12877_ch_T0001594;transcript_name=NA12877_ch_T0001594;gene_name=ENSG00000305658;ID=intron:NA12877_ch_T0001594:2;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22638252	22638590	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001594;gene_id=NA12877_ch_G0000529;Parent=NA12877_ch_T0001594;transcript_name=NA12877_ch_T0001594;gene_name=ENSG00000305658;ID=exon:NA12877_ch_T0001594:3;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22660090	22693126	.	+	.	source_gene_common_name=OFD1P8Y;source_gene=ENSG00000231159.1;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;gene_id=NA12877_ch_G0000530;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P8Y;gene_sources=liftoff;ID=NA12877_ch_G0000530;Name=OFD1P8Y
NA12877_chrY	CAT	transcript	22660090	22693126	1000	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_G0000530;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=NA12877_ch_T0001595;Name=OFD1P8Y
NA12877_chrY	CAT	exon	22660090	22660196	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=exon:NA12877_ch_T0001595:0;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22660197	22661708	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=intron:NA12877_ch_T0001595:0;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22661709	22661836	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=exon:NA12877_ch_T0001595:1;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22661837	22662372	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=intron:NA12877_ch_T0001595:1;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22662373	22662482	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=exon:NA12877_ch_T0001595:2;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22662483	22664199	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=intron:NA12877_ch_T0001595:2;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22664200	22664815	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=exon:NA12877_ch_T0001595:3;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22664816	22665188	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=intron:NA12877_ch_T0001595:3;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22665189	22665299	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=exon:NA12877_ch_T0001595:4;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22665300	22684639	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=intron:NA12877_ch_T0001595:4;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22684640	22684740	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=exon:NA12877_ch_T0001595:5;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22684741	22691372	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=intron:NA12877_ch_T0001595:5;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22691373	22691524	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=exon:NA12877_ch_T0001595:6;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22691525	22692720	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=intron:NA12877_ch_T0001595:6;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22692721	22692786	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=exon:NA12877_ch_T0001595:7;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22692787	22693084	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=intron:NA12877_ch_T0001595:7;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22693085	22693126	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1,ENST00000449148.1;transcript_id=NA12877_ch_T0001595;gene_id=NA12877_ch_G0000530;Parent=NA12877_ch_T0001595;transcript_name=NA12877_ch_T0001595;gene_name=OFD1P8Y;ID=exon:NA12877_ch_T0001595:8;Name=OFD1P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22688913	22737255	.	-	.	source_gene_common_name=ENSG00000310035;source_gene=ENSG00000310035.1;gene_id=NA12877_ch_G0000531;gene_biotype=lncRNA;gene_name=ENSG00000310035;gene_sources=liftoff;ID=NA12877_ch_G0000531;Name=ENSG00000310035
NA12877_chrY	CAT	transcript	22688913	22737194	1000	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001596;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_G0000531;transcript_name=NA12877_ch_T0001596;gene_name=ENSG00000310035;ID=NA12877_ch_T0001596;Name=ENSG00000310035
NA12877_chrY	CAT	exon	22688913	22689187	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001596;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001596;transcript_name=NA12877_ch_T0001596;gene_name=ENSG00000310035;ID=exon:NA12877_ch_T0001596:0;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22689188	22696733	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001596;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001596;transcript_name=NA12877_ch_T0001596;gene_name=ENSG00000310035;ID=intron:NA12877_ch_T0001596:0;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22696734	22697036	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001596;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001596;transcript_name=NA12877_ch_T0001596;gene_name=ENSG00000310035;ID=exon:NA12877_ch_T0001596:1;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22697037	22732204	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001596;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001596;transcript_name=NA12877_ch_T0001596;gene_name=ENSG00000310035;ID=intron:NA12877_ch_T0001596:1;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22732205	22732366	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001596;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001596;transcript_name=NA12877_ch_T0001596;gene_name=ENSG00000310035;ID=exon:NA12877_ch_T0001596:2;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22732367	22736930	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001596;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001596;transcript_name=NA12877_ch_T0001596;gene_name=ENSG00000310035;ID=intron:NA12877_ch_T0001596:2;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22736931	22737194	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001596;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001596;transcript_name=NA12877_ch_T0001596;gene_name=ENSG00000310035;ID=exon:NA12877_ch_T0001596:3;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22696408	22737255	1000	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001597;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_G0000531;transcript_name=NA12877_ch_T0001597;gene_name=ENSG00000310035;ID=NA12877_ch_T0001597;Name=ENSG00000310035
NA12877_chrY	CAT	exon	22696408	22697036	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001597;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001597;transcript_name=NA12877_ch_T0001597;gene_name=ENSG00000310035;ID=exon:NA12877_ch_T0001597:0;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22697037	22732204	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001597;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001597;transcript_name=NA12877_ch_T0001597;gene_name=ENSG00000310035;ID=intron:NA12877_ch_T0001597:0;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22732205	22732366	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001597;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001597;transcript_name=NA12877_ch_T0001597;gene_name=ENSG00000310035;ID=exon:NA12877_ch_T0001597:1;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22732367	22736930	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001597;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001597;transcript_name=NA12877_ch_T0001597;gene_name=ENSG00000310035;ID=intron:NA12877_ch_T0001597:1;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22736931	22737255	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001597;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001597;transcript_name=NA12877_ch_T0001597;gene_name=ENSG00000310035;ID=exon:NA12877_ch_T0001597:2;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22713901	22737241	1000	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001598;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_G0000531;transcript_name=NA12877_ch_T0001598;gene_name=ENSG00000310035;ID=NA12877_ch_T0001598;Name=ENSG00000310035
NA12877_chrY	CAT	exon	22713901	22714268	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001598;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001598;transcript_name=NA12877_ch_T0001598;gene_name=ENSG00000310035;ID=exon:NA12877_ch_T0001598:0;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22714269	22736930	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001598;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001598;transcript_name=NA12877_ch_T0001598;gene_name=ENSG00000310035;ID=intron:NA12877_ch_T0001598:0;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22736931	22737241	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001598;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001598;transcript_name=NA12877_ch_T0001598;gene_name=ENSG00000310035;ID=exon:NA12877_ch_T0001598:1;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22713976	22737179	1000	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001599;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_G0000531;transcript_name=NA12877_ch_T0001599;gene_name=ENSG00000310035;ID=NA12877_ch_T0001599;Name=ENSG00000310035
NA12877_chrY	CAT	exon	22713976	22714268	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001599;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001599;transcript_name=NA12877_ch_T0001599;gene_name=ENSG00000310035;ID=exon:NA12877_ch_T0001599:0;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22714269	22732208	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001599;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001599;transcript_name=NA12877_ch_T0001599;gene_name=ENSG00000310035;ID=intron:NA12877_ch_T0001599:0;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22732209	22732366	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001599;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001599;transcript_name=NA12877_ch_T0001599;gene_name=ENSG00000310035;ID=exon:NA12877_ch_T0001599:1;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22732367	22736930	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001599;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001599;transcript_name=NA12877_ch_T0001599;gene_name=ENSG00000310035;ID=intron:NA12877_ch_T0001599:1;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22736931	22737179	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=NA12877_ch_T0001599;gene_id=NA12877_ch_G0000531;Parent=NA12877_ch_T0001599;transcript_name=NA12877_ch_T0001599;gene_name=ENSG00000310035;ID=exon:NA12877_ch_T0001599:2;Name=ENSG00000310035;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22716099	22719267	.	+	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=NA12877_ch_G0000532;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=NA12877_ch_G0000532;Name=ENSG00000295422
NA12877_chrY	CAT	transcript	22716099	22719267	1000	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001600;gene_id=NA12877_ch_G0000532;Parent=NA12877_ch_G0000532;transcript_name=NA12877_ch_T0001600;gene_name=ENSG00000295422;ID=NA12877_ch_T0001600;Name=ENSG00000295422
NA12877_chrY	CAT	exon	22716099	22716209	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001600;gene_id=NA12877_ch_G0000532;Parent=NA12877_ch_T0001600;transcript_name=NA12877_ch_T0001600;gene_name=ENSG00000295422;ID=exon:NA12877_ch_T0001600:0;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22716210	22716326	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001600;gene_id=NA12877_ch_G0000532;Parent=NA12877_ch_T0001600;transcript_name=NA12877_ch_T0001600;gene_name=ENSG00000295422;ID=intron:NA12877_ch_T0001600:0;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22716327	22716387	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001600;gene_id=NA12877_ch_G0000532;Parent=NA12877_ch_T0001600;transcript_name=NA12877_ch_T0001600;gene_name=ENSG00000295422;ID=exon:NA12877_ch_T0001600:1;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22716388	22717922	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001600;gene_id=NA12877_ch_G0000532;Parent=NA12877_ch_T0001600;transcript_name=NA12877_ch_T0001600;gene_name=ENSG00000295422;ID=intron:NA12877_ch_T0001600:1;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22717923	22719267	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001600;gene_id=NA12877_ch_G0000532;Parent=NA12877_ch_T0001600;transcript_name=NA12877_ch_T0001600;gene_name=ENSG00000295422;ID=exon:NA12877_ch_T0001600:2;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22736331	22737124	.	-	.	source_gene_common_name=HSFY5P;source_gene=ENSG00000232475.1;gene_id=NA12877_ch_G0000533;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY5P;gene_sources=liftoff;ID=NA12877_ch_G0000533;Name=HSFY5P
NA12877_chrY	CAT	transcript	22736331	22737124	1000	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=NA12877_ch_T0001601;gene_id=NA12877_ch_G0000533;Parent=NA12877_ch_G0000533;transcript_name=NA12877_ch_T0001601;gene_name=HSFY5P;ID=NA12877_ch_T0001601;Name=HSFY5P
NA12877_chrY	CAT	exon	22736331	22736480	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=NA12877_ch_T0001601;gene_id=NA12877_ch_G0000533;Parent=NA12877_ch_T0001601;transcript_name=NA12877_ch_T0001601;gene_name=HSFY5P;ID=exon:NA12877_ch_T0001601:0;Name=HSFY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22736481	22736965	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=NA12877_ch_T0001601;gene_id=NA12877_ch_G0000533;Parent=NA12877_ch_T0001601;transcript_name=NA12877_ch_T0001601;gene_name=HSFY5P;ID=intron:NA12877_ch_T0001601:0;Name=HSFY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22736966	22737124	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=NA12877_ch_T0001601;gene_id=NA12877_ch_G0000533;Parent=NA12877_ch_T0001601;transcript_name=NA12877_ch_T0001601;gene_name=HSFY5P;ID=exon:NA12877_ch_T0001601:1;Name=HSFY5P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22737532	22745890	.	-	.	source_gene_common_name=USP9YP17;source_gene=ENSG00000229553.1;alternative_source_transcripts=ENST00000444617.1,ENST00000444617.1;gene_id=NA12877_ch_G0000534;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP17;gene_sources=liftoff;ID=NA12877_ch_G0000534;Name=USP9YP17
NA12877_chrY	CAT	transcript	22737532	22745890	1000	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1,ENST00000444617.1;transcript_id=NA12877_ch_T0001602;gene_id=NA12877_ch_G0000534;Parent=NA12877_ch_G0000534;transcript_name=NA12877_ch_T0001602;gene_name=USP9YP17;ID=NA12877_ch_T0001602;Name=USP9YP17
NA12877_chrY	CAT	exon	22737532	22737570	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1,ENST00000444617.1;transcript_id=NA12877_ch_T0001602;gene_id=NA12877_ch_G0000534;Parent=NA12877_ch_T0001602;transcript_name=NA12877_ch_T0001602;gene_name=USP9YP17;ID=exon:NA12877_ch_T0001602:0;Name=USP9YP17;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22737571	22739286	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1,ENST00000444617.1;transcript_id=NA12877_ch_T0001602;gene_id=NA12877_ch_G0000534;Parent=NA12877_ch_T0001602;transcript_name=NA12877_ch_T0001602;gene_name=USP9YP17;ID=intron:NA12877_ch_T0001602:0;Name=USP9YP17;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22739287	22739415	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1,ENST00000444617.1;transcript_id=NA12877_ch_T0001602;gene_id=NA12877_ch_G0000534;Parent=NA12877_ch_T0001602;transcript_name=NA12877_ch_T0001602;gene_name=USP9YP17;ID=exon:NA12877_ch_T0001602:1;Name=USP9YP17;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22739416	22741773	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1,ENST00000444617.1;transcript_id=NA12877_ch_T0001602;gene_id=NA12877_ch_G0000534;Parent=NA12877_ch_T0001602;transcript_name=NA12877_ch_T0001602;gene_name=USP9YP17;ID=intron:NA12877_ch_T0001602:1;Name=USP9YP17;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22741774	22741962	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1,ENST00000444617.1;transcript_id=NA12877_ch_T0001602;gene_id=NA12877_ch_G0000534;Parent=NA12877_ch_T0001602;transcript_name=NA12877_ch_T0001602;gene_name=USP9YP17;ID=exon:NA12877_ch_T0001602:2;Name=USP9YP17;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22741963	22743748	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1,ENST00000444617.1;transcript_id=NA12877_ch_T0001602;gene_id=NA12877_ch_G0000534;Parent=NA12877_ch_T0001602;transcript_name=NA12877_ch_T0001602;gene_name=USP9YP17;ID=intron:NA12877_ch_T0001602:2;Name=USP9YP17;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22743749	22743866	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1,ENST00000444617.1;transcript_id=NA12877_ch_T0001602;gene_id=NA12877_ch_G0000534;Parent=NA12877_ch_T0001602;transcript_name=NA12877_ch_T0001602;gene_name=USP9YP17;ID=exon:NA12877_ch_T0001602:3;Name=USP9YP17;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22743867	22745669	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1,ENST00000444617.1;transcript_id=NA12877_ch_T0001602;gene_id=NA12877_ch_G0000534;Parent=NA12877_ch_T0001602;transcript_name=NA12877_ch_T0001602;gene_name=USP9YP17;ID=intron:NA12877_ch_T0001602:3;Name=USP9YP17;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22745670	22745890	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1,ENST00000444617.1;transcript_id=NA12877_ch_T0001602;gene_id=NA12877_ch_G0000534;Parent=NA12877_ch_T0001602;transcript_name=NA12877_ch_T0001602;gene_name=USP9YP17;ID=exon:NA12877_ch_T0001602:4;Name=USP9YP17;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22752475	22753489	.	+	.	source_gene_common_name=CDY12P;source_gene=ENSG00000228850.1;alternative_source_transcripts=ENST00000440679.1,ENST00000440679.1;gene_id=NA12877_ch_G0000535;gene_biotype=unprocessed_pseudogene;gene_name=CDY12P;gene_sources=liftoff;ID=NA12877_ch_G0000535;Name=CDY12P
NA12877_chrY	CAT	transcript	22752475	22753489	1000	+	.	source_transcript=ENST00000440679.1;source_transcript_name=CDY12P-201;source_gene=ENSG00000228850.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228850.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440679.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY12P;alternative_source_transcripts=ENST00000440679.1,ENST00000440679.1;transcript_id=NA12877_ch_T0001603;gene_id=NA12877_ch_G0000535;Parent=NA12877_ch_G0000535;transcript_name=NA12877_ch_T0001603;gene_name=CDY12P;ID=NA12877_ch_T0001603;Name=CDY12P
NA12877_chrY	CAT	exon	22752475	22753489	.	+	.	source_transcript=ENST00000440679.1;source_transcript_name=CDY12P-201;source_gene=ENSG00000228850.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228850.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440679.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY12P;alternative_source_transcripts=ENST00000440679.1,ENST00000440679.1;transcript_id=NA12877_ch_T0001603;gene_id=NA12877_ch_G0000535;Parent=NA12877_ch_T0001603;transcript_name=NA12877_ch_T0001603;gene_name=CDY12P;ID=exon:NA12877_ch_T0001603:0;Name=CDY12P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22756597	22756928	.	+	.	source_gene_common_name=ELOCP15;source_gene=ENSG00000232029.1;alternative_source_transcripts=ENST00000442090.1,ENST00000442090.1;gene_id=NA12877_ch_G0000536;gene_biotype=processed_pseudogene;gene_name=ELOCP15;gene_sources=liftoff;ID=NA12877_ch_G0000536;Name=ELOCP15
NA12877_chrY	CAT	transcript	22756597	22756928	1000	+	.	source_transcript=ENST00000442090.1;source_transcript_name=ELOCP15-201;source_gene=ENSG00000232029.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232029.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP15;alternative_source_transcripts=ENST00000442090.1,ENST00000442090.1;transcript_id=NA12877_ch_T0001604;gene_id=NA12877_ch_G0000536;Parent=NA12877_ch_G0000536;transcript_name=NA12877_ch_T0001604;gene_name=ELOCP15;ID=NA12877_ch_T0001604;Name=ELOCP15
NA12877_chrY	CAT	exon	22756597	22756928	.	+	.	source_transcript=ENST00000442090.1;source_transcript_name=ELOCP15-201;source_gene=ENSG00000232029.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232029.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP15;alternative_source_transcripts=ENST00000442090.1,ENST00000442090.1;transcript_id=NA12877_ch_T0001604;gene_id=NA12877_ch_G0000536;Parent=NA12877_ch_T0001604;transcript_name=NA12877_ch_T0001604;gene_name=ELOCP15;ID=exon:NA12877_ch_T0001604:0;Name=ELOCP15;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22759533	22835261	.	-	.	source_gene_common_name=ENSG00000236951;source_gene=ENSG00000236951.7;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;gene_id=NA12877_ch_G0000537;gene_biotype=lncRNA;gene_name=ENSG00000236951;gene_sources=liftoff;ID=NA12877_ch_G0000537;Name=ENSG00000236951
NA12877_chrY	CAT	transcript	22759533	22790145	1000	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;transcript_id=NA12877_ch_T0001605;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_G0000537;transcript_name=NA12877_ch_T0001605;gene_name=ENSG00000236951;ID=NA12877_ch_T0001605;Name=ENSG00000236951
NA12877_chrY	CAT	exon	22759533	22760358	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;transcript_id=NA12877_ch_T0001605;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001605;transcript_name=NA12877_ch_T0001605;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001605:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22760359	22769856	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;transcript_id=NA12877_ch_T0001605;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001605;transcript_name=NA12877_ch_T0001605;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001605:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22769857	22769972	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;transcript_id=NA12877_ch_T0001605;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001605;transcript_name=NA12877_ch_T0001605;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001605:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22769973	22772547	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;transcript_id=NA12877_ch_T0001605;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001605;transcript_name=NA12877_ch_T0001605;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001605:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22772548	22772668	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;transcript_id=NA12877_ch_T0001605;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001605;transcript_name=NA12877_ch_T0001605;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001605:2;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22772669	22783510	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;transcript_id=NA12877_ch_T0001605;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001605;transcript_name=NA12877_ch_T0001605;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001605:2;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22783511	22783597	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;transcript_id=NA12877_ch_T0001605;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001605;transcript_name=NA12877_ch_T0001605;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001605:3;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22783598	22783698	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;transcript_id=NA12877_ch_T0001605;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001605;transcript_name=NA12877_ch_T0001605;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001605:3;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22783699	22783787	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;transcript_id=NA12877_ch_T0001605;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001605;transcript_name=NA12877_ch_T0001605;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001605:4;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22783788	22789880	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;transcript_id=NA12877_ch_T0001605;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001605;transcript_name=NA12877_ch_T0001605;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001605:4;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22789881	22790145	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303804.6;transcript_id=NA12877_ch_T0001605;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001605;transcript_name=NA12877_ch_T0001605;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001605:5;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22759533	22790145	1000	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_G0000537;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=NA12877_ch_T0001606;Name=ENSG00000236951
NA12877_chrY	CAT	exon	22759533	22760358	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001606:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22760359	22761420	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001606:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22761421	22761535	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001606:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22761536	22769856	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001606:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22769857	22769972	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001606:2;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22769973	22772547	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001606:2;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22772548	22772668	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001606:3;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22772669	22783510	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001606:3;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22783511	22783597	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001606:4;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22783598	22783698	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001606:4;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22783699	22783787	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001606:5;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22783788	22789880	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001606:5;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22789881	22790145	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000472391.2;transcript_id=NA12877_ch_T0001606;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001606;transcript_name=NA12877_ch_T0001606;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001606:6;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22788590	22793645	1000	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5,ENST00000417910.5;transcript_id=NA12877_ch_T0001607;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_G0000537;transcript_name=NA12877_ch_T0001607;gene_name=ENSG00000236951;ID=NA12877_ch_T0001607;Name=ENSG00000236951
NA12877_chrY	CAT	exon	22788590	22788831	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5,ENST00000417910.5;transcript_id=NA12877_ch_T0001607;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001607;transcript_name=NA12877_ch_T0001607;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001607:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22788832	22789880	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5,ENST00000417910.5;transcript_id=NA12877_ch_T0001607;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001607;transcript_name=NA12877_ch_T0001607;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001607:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22789881	22790145	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5,ENST00000417910.5;transcript_id=NA12877_ch_T0001607;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001607;transcript_name=NA12877_ch_T0001607;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001607:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22790146	22790660	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5,ENST00000417910.5;transcript_id=NA12877_ch_T0001607;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001607;transcript_name=NA12877_ch_T0001607;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001607:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22790661	22790778	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5,ENST00000417910.5;transcript_id=NA12877_ch_T0001607;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001607;transcript_name=NA12877_ch_T0001607;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001607:2;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22790779	22793525	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5,ENST00000417910.5;transcript_id=NA12877_ch_T0001607;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001607;transcript_name=NA12877_ch_T0001607;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001607:2;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22793526	22793645	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5,ENST00000417910.5;transcript_id=NA12877_ch_T0001607;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001607;transcript_name=NA12877_ch_T0001607;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001607:3;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22789281	22809256	1000	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1,ENST00000775784.1;transcript_id=NA12877_ch_T0001608;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_G0000537;transcript_name=NA12877_ch_T0001608;gene_name=ENSG00000236951;ID=NA12877_ch_T0001608;Name=ENSG00000236951
NA12877_chrY	CAT	exon	22789281	22790145	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1,ENST00000775784.1;transcript_id=NA12877_ch_T0001608;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001608;transcript_name=NA12877_ch_T0001608;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001608:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22790146	22790660	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1,ENST00000775784.1;transcript_id=NA12877_ch_T0001608;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001608;transcript_name=NA12877_ch_T0001608;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001608:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22790661	22790782	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1,ENST00000775784.1;transcript_id=NA12877_ch_T0001608;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001608;transcript_name=NA12877_ch_T0001608;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001608:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22790783	22809059	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1,ENST00000775784.1;transcript_id=NA12877_ch_T0001608;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001608;transcript_name=NA12877_ch_T0001608;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001608:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22809060	22809256	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1,ENST00000775784.1;transcript_id=NA12877_ch_T0001608;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001608;transcript_name=NA12877_ch_T0001608;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001608:2;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22789468	22835261	1000	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_G0000537;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=NA12877_ch_T0001609;Name=ENSG00000236951
NA12877_chrY	CAT	exon	22789468	22790145	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22790146	22790660	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001609:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22790661	22790778	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22790779	22791322	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001609:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22791323	22791519	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:2;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22791520	22791639	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001609:2;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22791640	22791725	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:3;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22791726	22793525	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001609:3;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22793526	22793861	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:4;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22793862	22795327	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001609:4;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22795328	22795417	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:5;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22795418	22809059	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001609:5;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22809060	22809413	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:6;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22809414	22809843	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001609:6;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22809844	22809962	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:7;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22809963	22817140	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001609:7;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22817141	22817226	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:8;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22817227	22817534	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001609:8;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22817535	22817757	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:9;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22817758	22827728	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001609:9;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22827729	22827869	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:10;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22827870	22834416	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001609:10;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22834417	22834726	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:11;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22834727	22835060	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001609:11;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22835061	22835261	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1,ENST00000419158.1;transcript_id=NA12877_ch_T0001609;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001609;transcript_name=NA12877_ch_T0001609;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001609:12;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22807252	22809266	1000	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1,ENST00000775785.1;transcript_id=NA12877_ch_T0001610;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_G0000537;transcript_name=NA12877_ch_T0001610;gene_name=ENSG00000236951;ID=NA12877_ch_T0001610;Name=ENSG00000236951
NA12877_chrY	CAT	exon	22807252	22807461	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1,ENST00000775785.1;transcript_id=NA12877_ch_T0001610;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001610;transcript_name=NA12877_ch_T0001610;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001610:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22807462	22809059	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1,ENST00000775785.1;transcript_id=NA12877_ch_T0001610;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001610;transcript_name=NA12877_ch_T0001610;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001610:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22809060	22809266	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1,ENST00000775785.1;transcript_id=NA12877_ch_T0001610;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001610;transcript_name=NA12877_ch_T0001610;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001610:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22824168	22835187	1000	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1,ENST00000774613.1;transcript_id=NA12877_ch_T0001612;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_G0000537;transcript_name=NA12877_ch_T0001612;gene_name=ENSG00000236951;ID=NA12877_ch_T0001612;Name=ENSG00000236951
NA12877_chrY	CAT	exon	22824168	22824962	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1,ENST00000774613.1;transcript_id=NA12877_ch_T0001612;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001612;transcript_name=NA12877_ch_T0001612;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001612:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22824963	22827728	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1,ENST00000774613.1;transcript_id=NA12877_ch_T0001612;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001612;transcript_name=NA12877_ch_T0001612;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001612:0;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22827729	22827869	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1,ENST00000774613.1;transcript_id=NA12877_ch_T0001612;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001612;transcript_name=NA12877_ch_T0001612;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001612:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22827870	22835060	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1,ENST00000774613.1;transcript_id=NA12877_ch_T0001612;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001612;transcript_name=NA12877_ch_T0001612;gene_name=ENSG00000236951;ID=intron:NA12877_ch_T0001612:1;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22835061	22835187	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1,ENST00000774613.1;transcript_id=NA12877_ch_T0001612;gene_id=NA12877_ch_G0000537;Parent=NA12877_ch_T0001612;transcript_name=NA12877_ch_T0001612;gene_name=ENSG00000236951;ID=exon:NA12877_ch_T0001612:2;Name=ENSG00000236951;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22819720	22834608	.	+	.	source_gene_common_name=TTTY6B;source_gene=ENSG00000131548.8;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;gene_id=NA12877_ch_G0000538;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=NA12877_ch_G0000538;Name=TTTY6B
NA12877_chrY	CAT	transcript	22819720	22834608	1000	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_G0000538;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=NA12877_ch_T0001611;Name=TTTY6B
NA12877_chrY	CAT	exon	22819720	22819774	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001611:0;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22819775	22822157	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=intron:NA12877_ch_T0001611:0;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22822158	22822231	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001611:1;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22822232	22826972	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=intron:NA12877_ch_T0001611:1;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22826973	22827134	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001611:2;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22827135	22829416	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=intron:NA12877_ch_T0001611:2;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22829417	22829577	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001611:3;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22829578	22832742	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=intron:NA12877_ch_T0001611:3;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22832743	22832856	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001611:4;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22832857	22833074	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=intron:NA12877_ch_T0001611:4;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22833075	22833212	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001611:5;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22833213	22834369	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=intron:NA12877_ch_T0001611:5;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22834370	22834608	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253848.4;transcript_id=NA12877_ch_T0001611;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001611;transcript_name=NA12877_ch_T0001611;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001611:6;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22829043	22834608	1000	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1,ENST00000774327.1;transcript_id=NA12877_ch_T0001613;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_G0000538;transcript_name=NA12877_ch_T0001613;gene_name=TTTY6B;ID=NA12877_ch_T0001613;Name=TTTY6B
NA12877_chrY	CAT	exon	22829043	22829172	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1,ENST00000774327.1;transcript_id=NA12877_ch_T0001613;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001613;transcript_name=NA12877_ch_T0001613;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001613:0;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22829173	22829416	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1,ENST00000774327.1;transcript_id=NA12877_ch_T0001613;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001613;transcript_name=NA12877_ch_T0001613;gene_name=TTTY6B;ID=intron:NA12877_ch_T0001613:0;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22829417	22829577	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1,ENST00000774327.1;transcript_id=NA12877_ch_T0001613;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001613;transcript_name=NA12877_ch_T0001613;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001613:1;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22829578	22832742	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1,ENST00000774327.1;transcript_id=NA12877_ch_T0001613;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001613;transcript_name=NA12877_ch_T0001613;gene_name=TTTY6B;ID=intron:NA12877_ch_T0001613:1;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22832743	22832856	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1,ENST00000774327.1;transcript_id=NA12877_ch_T0001613;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001613;transcript_name=NA12877_ch_T0001613;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001613:2;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22832857	22833074	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1,ENST00000774327.1;transcript_id=NA12877_ch_T0001613;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001613;transcript_name=NA12877_ch_T0001613;gene_name=TTTY6B;ID=intron:NA12877_ch_T0001613:2;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22833075	22833212	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1,ENST00000774327.1;transcript_id=NA12877_ch_T0001613;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001613;transcript_name=NA12877_ch_T0001613;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001613:3;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22833213	22833330	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1,ENST00000774327.1;transcript_id=NA12877_ch_T0001613;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001613;transcript_name=NA12877_ch_T0001613;gene_name=TTTY6B;ID=intron:NA12877_ch_T0001613:3;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22833331	22833421	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1,ENST00000774327.1;transcript_id=NA12877_ch_T0001613;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001613;transcript_name=NA12877_ch_T0001613;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001613:4;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22833422	22834369	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1,ENST00000774327.1;transcript_id=NA12877_ch_T0001613;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001613;transcript_name=NA12877_ch_T0001613;gene_name=TTTY6B;ID=intron:NA12877_ch_T0001613:4;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22834370	22834608	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1,ENST00000774327.1;transcript_id=NA12877_ch_T0001613;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001613;transcript_name=NA12877_ch_T0001613;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001613:5;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22830482	22834606	1000	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1,ENST00000774328.1;transcript_id=NA12877_ch_T0001614;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_G0000538;transcript_name=NA12877_ch_T0001614;gene_name=TTTY6B;ID=NA12877_ch_T0001614;Name=TTTY6B
NA12877_chrY	CAT	exon	22830482	22830747	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1,ENST00000774328.1;transcript_id=NA12877_ch_T0001614;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001614;transcript_name=NA12877_ch_T0001614;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001614:0;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22830748	22834369	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1,ENST00000774328.1;transcript_id=NA12877_ch_T0001614;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001614;transcript_name=NA12877_ch_T0001614;gene_name=TTTY6B;ID=intron:NA12877_ch_T0001614:0;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22834370	22834606	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1,ENST00000774328.1;transcript_id=NA12877_ch_T0001614;gene_id=NA12877_ch_G0000538;Parent=NA12877_ch_T0001614;transcript_name=NA12877_ch_T0001614;gene_name=TTTY6B;ID=exon:NA12877_ch_T0001614:1;Name=TTTY6B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22856320	22870760	.	-	.	source_gene_common_name=RBMY1F;source_gene=ENSG00000169800.14;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;gene_id=NA12877_ch_G0000539;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=liftoff;ID=NA12877_ch_G0000539;Name=RBMY1F
NA12877_chrY	CAT	transcript	22856320	22870701	100	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_G0000539;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=NA12877_ch_T0001615;Name=RBMY1F
NA12877_chrY	CAT	exon	22856320	22856896	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001615:0;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22856598	22856896	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001615:0;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22856598	22856600	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=stop_codon:NA12877_ch_T0001615;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22856897	22857307	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001615:0;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22857308	22857396	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001615:1;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22857308	22857396	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001615:1;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22857397	22857482	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001615:1;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22857483	22857593	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001615:2;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22857483	22857593	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001615:2;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22857594	22858516	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001615:2;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22858517	22858627	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001615:3;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22858517	22858627	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001615:3;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22858628	22859061	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001615:3;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22859062	22859172	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001615:4;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22859062	22859172	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001615:4;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22859173	22859612	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001615:4;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22859613	22859723	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001615:5;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22859613	22859723	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001615:5;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22859724	22860678	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001615:5;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22860679	22860793	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001615:6;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22860679	22860793	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001615:6;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22860794	22862803	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001615:6;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22862804	22862956	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001615:7;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22862804	22862956	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001615:7;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22862957	22864871	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001615:7;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22864872	22865049	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001615:8;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22864872	22865049	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001615:8;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22865050	22868068	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001615:8;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22868069	22868172	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001615:9;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22868069	22868172	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001615:9;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22868173	22868638	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001615:9;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22868639	22868751	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001615:10;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22868639	22868747	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001615:10;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22868745	22868747	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=start_codon:NA12877_ch_T0001615;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22868752	22870612	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001615:10;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22870613	22870701	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12,ENST00000303766.12;transcript_id=NA12877_ch_T0001615;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001615;transcript_name=NA12877_ch_T0001615;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001615:11;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22856320	22870760	100	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_G0000539;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=NA12877_ch_T0001616;Name=RBMY1F
NA12877_chrY	CAT	exon	22856320	22856896	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001616:0;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22856598	22856896	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001616:0;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	22856598	22856600	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=stop_codon:NA12877_ch_T0001616;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22856897	22857307	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001616:0;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22857308	22857396	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001616:1;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22857308	22857396	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001616:1;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22857397	22858516	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001616:1;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22858517	22858627	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001616:2;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22858517	22858627	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001616:2;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22858628	22859061	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001616:2;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22859062	22859172	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001616:3;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22859062	22859172	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001616:3;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22859173	22859612	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001616:3;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22859613	22859723	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001616:4;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22859613	22859723	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001616:4;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22859724	22860678	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001616:4;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22860679	22860793	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001616:5;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22860679	22860793	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001616:5;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22860794	22862803	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001616:5;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22862804	22862956	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001616:6;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22862804	22862956	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001616:6;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22862957	22864871	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001616:6;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22864872	22865049	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001616:7;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22864872	22865049	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001616:7;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22865050	22868068	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001616:7;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22868069	22868172	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001616:8;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22868069	22868172	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001616:8;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22868173	22868638	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001616:8;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22868639	22868751	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001616:9;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	22868639	22868747	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=CDS:NA12877_ch_T0001616:9;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	22868745	22868747	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=start_codon:NA12877_ch_T0001616;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22868752	22870612	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001616:9;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22870613	22870760	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2,ENST00000454978.2;transcript_id=NA12877_ch_T0001616;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001616;transcript_name=NA12877_ch_T0001616;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001616:10;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22856320	22870735	1000	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_G0000539;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=NA12877_ch_T0001617;Name=RBMY1F
NA12877_chrY	CAT	exon	22856320	22856896	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001617:0;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22856897	22857307	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001617:0;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22857308	22857396	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001617:1;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22857397	22857482	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001617:1;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22857483	22857593	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001617:2;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22857594	22858516	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001617:2;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22858517	22858627	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001617:3;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22858628	22859061	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001617:3;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22859062	22859172	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001617:4;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22859173	22859612	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001617:4;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22859613	22859723	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001617:5;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22859724	22860678	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001617:5;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22860679	22860793	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001617:6;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22860794	22862803	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001617:6;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22862804	22862956	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001617:7;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22862957	22868068	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001617:7;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22868069	22868172	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001617:8;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22868173	22868638	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001617:8;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22868639	22868751	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001617:9;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22868752	22870612	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=intron:NA12877_ch_T0001617:9;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22870613	22870735	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000481858.1;transcript_id=NA12877_ch_T0001617;gene_id=NA12877_ch_G0000539;Parent=NA12877_ch_T0001617;transcript_name=NA12877_ch_T0001617;gene_name=RBMY1F;ID=exon:NA12877_ch_T0001617:10;Name=RBMY1F;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22871628	22873799	.	+	.	source_gene_common_name=TSPY23P;source_gene=ENSG00000229159.1;alternative_source_transcripts=ENST00000440136.1,ENST00000440136.1;gene_id=NA12877_ch_G0000540;gene_biotype=unprocessed_pseudogene;gene_name=TSPY23P;gene_sources=liftoff;ID=NA12877_ch_G0000540;Name=TSPY23P
NA12877_chrY	CAT	transcript	22871628	22873799	1000	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1,ENST00000440136.1;transcript_id=NA12877_ch_T0001618;gene_id=NA12877_ch_G0000540;Parent=NA12877_ch_G0000540;transcript_name=NA12877_ch_T0001618;gene_name=TSPY23P;ID=NA12877_ch_T0001618;Name=TSPY23P
NA12877_chrY	CAT	exon	22871628	22872021	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1,ENST00000440136.1;transcript_id=NA12877_ch_T0001618;gene_id=NA12877_ch_G0000540;Parent=NA12877_ch_T0001618;transcript_name=NA12877_ch_T0001618;gene_name=TSPY23P;ID=exon:NA12877_ch_T0001618:0;Name=TSPY23P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22872022	22873012	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1,ENST00000440136.1;transcript_id=NA12877_ch_T0001618;gene_id=NA12877_ch_G0000540;Parent=NA12877_ch_T0001618;transcript_name=NA12877_ch_T0001618;gene_name=TSPY23P;ID=intron:NA12877_ch_T0001618:0;Name=TSPY23P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22873013	22873094	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1,ENST00000440136.1;transcript_id=NA12877_ch_T0001618;gene_id=NA12877_ch_G0000540;Parent=NA12877_ch_T0001618;transcript_name=NA12877_ch_T0001618;gene_name=TSPY23P;ID=exon:NA12877_ch_T0001618:1;Name=TSPY23P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22873095	22873332	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1,ENST00000440136.1;transcript_id=NA12877_ch_T0001618;gene_id=NA12877_ch_G0000540;Parent=NA12877_ch_T0001618;transcript_name=NA12877_ch_T0001618;gene_name=TSPY23P;ID=intron:NA12877_ch_T0001618:1;Name=TSPY23P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22873333	22873403	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1,ENST00000440136.1;transcript_id=NA12877_ch_T0001618;gene_id=NA12877_ch_G0000540;Parent=NA12877_ch_T0001618;transcript_name=NA12877_ch_T0001618;gene_name=TSPY23P;ID=exon:NA12877_ch_T0001618:2;Name=TSPY23P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22873404	22873490	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1,ENST00000440136.1;transcript_id=NA12877_ch_T0001618;gene_id=NA12877_ch_G0000540;Parent=NA12877_ch_T0001618;transcript_name=NA12877_ch_T0001618;gene_name=TSPY23P;ID=intron:NA12877_ch_T0001618:2;Name=TSPY23P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22873491	22873634	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1,ENST00000440136.1;transcript_id=NA12877_ch_T0001618;gene_id=NA12877_ch_G0000540;Parent=NA12877_ch_T0001618;transcript_name=NA12877_ch_T0001618;gene_name=TSPY23P;ID=exon:NA12877_ch_T0001618:3;Name=TSPY23P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22873635	22873751	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1,ENST00000440136.1;transcript_id=NA12877_ch_T0001618;gene_id=NA12877_ch_G0000540;Parent=NA12877_ch_T0001618;transcript_name=NA12877_ch_T0001618;gene_name=TSPY23P;ID=intron:NA12877_ch_T0001618:3;Name=TSPY23P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22873752	22873799	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1,ENST00000440136.1;transcript_id=NA12877_ch_T0001618;gene_id=NA12877_ch_G0000540;Parent=NA12877_ch_T0001618;transcript_name=NA12877_ch_T0001618;gene_name=TSPY23P;ID=exon:NA12877_ch_T0001618:4;Name=TSPY23P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22886207	22891490	.	+	.	source_gene_common_name=RBMY2UP;source_gene=ENSG00000225615.1;alternative_source_transcripts=ENST00000453474.1,ENST00000453474.1;gene_id=NA12877_ch_G0000541;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2UP;gene_sources=liftoff;ID=NA12877_ch_G0000541;Name=RBMY2UP
NA12877_chrY	CAT	transcript	22886207	22891490	1000	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1,ENST00000453474.1;transcript_id=NA12877_ch_T0001619;gene_id=NA12877_ch_G0000541;Parent=NA12877_ch_G0000541;transcript_name=NA12877_ch_T0001619;gene_name=RBMY2UP;ID=NA12877_ch_T0001619;Name=RBMY2UP
NA12877_chrY	CAT	exon	22886207	22886314	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1,ENST00000453474.1;transcript_id=NA12877_ch_T0001619;gene_id=NA12877_ch_G0000541;Parent=NA12877_ch_T0001619;transcript_name=NA12877_ch_T0001619;gene_name=RBMY2UP;ID=exon:NA12877_ch_T0001619:0;Name=RBMY2UP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22886315	22886717	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1,ENST00000453474.1;transcript_id=NA12877_ch_T0001619;gene_id=NA12877_ch_G0000541;Parent=NA12877_ch_T0001619;transcript_name=NA12877_ch_T0001619;gene_name=RBMY2UP;ID=intron:NA12877_ch_T0001619:0;Name=RBMY2UP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22886718	22886820	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1,ENST00000453474.1;transcript_id=NA12877_ch_T0001619;gene_id=NA12877_ch_G0000541;Parent=NA12877_ch_T0001619;transcript_name=NA12877_ch_T0001619;gene_name=RBMY2UP;ID=exon:NA12877_ch_T0001619:1;Name=RBMY2UP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22886821	22891377	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1,ENST00000453474.1;transcript_id=NA12877_ch_T0001619;gene_id=NA12877_ch_G0000541;Parent=NA12877_ch_T0001619;transcript_name=NA12877_ch_T0001619;gene_name=RBMY2UP;ID=intron:NA12877_ch_T0001619:1;Name=RBMY2UP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22891378	22891490	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1,ENST00000453474.1;transcript_id=NA12877_ch_T0001619;gene_id=NA12877_ch_G0000541;Parent=NA12877_ch_T0001619;transcript_name=NA12877_ch_T0001619;gene_name=RBMY2UP;ID=exon:NA12877_ch_T0001619:2;Name=RBMY2UP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22897109	22904358	.	+	.	source_gene_common_name=RBMY1KP;source_gene=ENSG00000229234.1;alternative_source_transcripts=ENST00000423480.1,ENST00000423480.1;gene_id=NA12877_ch_G0000542;gene_biotype=unprocessed_pseudogene;gene_name=RBMY1KP;gene_sources=liftoff;ID=NA12877_ch_G0000542;Name=RBMY1KP
NA12877_chrY	CAT	transcript	22897109	22904358	1000	+	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1,ENST00000423480.1;transcript_id=NA12877_ch_T0001620;gene_id=NA12877_ch_G0000542;Parent=NA12877_ch_G0000542;transcript_name=NA12877_ch_T0001620;gene_name=RBMY1KP;ID=NA12877_ch_T0001620;Name=RBMY1KP
NA12877_chrY	CAT	exon	22897109	22897221	.	+	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1,ENST00000423480.1;transcript_id=NA12877_ch_T0001620;gene_id=NA12877_ch_G0000542;Parent=NA12877_ch_T0001620;transcript_name=NA12877_ch_T0001620;gene_name=RBMY1KP;ID=exon:NA12877_ch_T0001620:0;Name=RBMY1KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22897222	22897734	.	+	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1,ENST00000423480.1;transcript_id=NA12877_ch_T0001620;gene_id=NA12877_ch_G0000542;Parent=NA12877_ch_T0001620;transcript_name=NA12877_ch_T0001620;gene_name=RBMY1KP;ID=intron:NA12877_ch_T0001620:0;Name=RBMY1KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22897735	22897805	.	+	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1,ENST00000423480.1;transcript_id=NA12877_ch_T0001620;gene_id=NA12877_ch_G0000542;Parent=NA12877_ch_T0001620;transcript_name=NA12877_ch_T0001620;gene_name=RBMY1KP;ID=exon:NA12877_ch_T0001620:1;Name=RBMY1KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22897806	22900202	.	+	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1,ENST00000423480.1;transcript_id=NA12877_ch_T0001620;gene_id=NA12877_ch_G0000542;Parent=NA12877_ch_T0001620;transcript_name=NA12877_ch_T0001620;gene_name=RBMY1KP;ID=intron:NA12877_ch_T0001620:1;Name=RBMY1KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22900203	22900379	.	+	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1,ENST00000423480.1;transcript_id=NA12877_ch_T0001620;gene_id=NA12877_ch_G0000542;Parent=NA12877_ch_T0001620;transcript_name=NA12877_ch_T0001620;gene_name=RBMY1KP;ID=exon:NA12877_ch_T0001620:2;Name=RBMY1KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22900380	22904243	.	+	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1,ENST00000423480.1;transcript_id=NA12877_ch_T0001620;gene_id=NA12877_ch_G0000542;Parent=NA12877_ch_T0001620;transcript_name=NA12877_ch_T0001620;gene_name=RBMY1KP;ID=intron:NA12877_ch_T0001620:2;Name=RBMY1KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22904244	22904358	.	+	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1,ENST00000423480.1;transcript_id=NA12877_ch_T0001620;gene_id=NA12877_ch_G0000542;Parent=NA12877_ch_T0001620;transcript_name=NA12877_ch_T0001620;gene_name=RBMY1KP;ID=exon:NA12877_ch_T0001620:3;Name=RBMY1KP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22984706	22986784	.	-	.	source_gene_common_name=TTTY5;source_gene=ENSG00000215560.2;alternative_source_transcripts=ENST00000400581.2,ENST00000400581.2;gene_id=NA12877_ch_G0000543;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=NA12877_ch_G0000543;Name=TTTY5
NA12877_chrY	CAT	transcript	22984706	22986784	1000	-	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2,ENST00000400581.2;transcript_id=NA12877_ch_T0001621;gene_id=NA12877_ch_G0000543;Parent=NA12877_ch_G0000543;transcript_name=NA12877_ch_T0001621;gene_name=TTTY5;ID=NA12877_ch_T0001621;Name=TTTY5
NA12877_chrY	CAT	exon	22984706	22985696	.	-	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2,ENST00000400581.2;transcript_id=NA12877_ch_T0001621;gene_id=NA12877_ch_G0000543;Parent=NA12877_ch_T0001621;transcript_name=NA12877_ch_T0001621;gene_name=TTTY5;ID=exon:NA12877_ch_T0001621:0;Name=TTTY5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22985697	22986213	.	-	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2,ENST00000400581.2;transcript_id=NA12877_ch_T0001621;gene_id=NA12877_ch_G0000543;Parent=NA12877_ch_T0001621;transcript_name=NA12877_ch_T0001621;gene_name=TTTY5;ID=intron:NA12877_ch_T0001621:0;Name=TTTY5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22986214	22986784	.	-	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2,ENST00000400581.2;transcript_id=NA12877_ch_T0001621;gene_id=NA12877_ch_G0000543;Parent=NA12877_ch_T0001621;transcript_name=NA12877_ch_T0001621;gene_name=TTTY5;ID=exon:NA12877_ch_T0001621:1;Name=TTTY5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22993837	22995863	.	-	.	source_gene_common_name=TSPY22P;source_gene=ENSG00000229940.1;alternative_source_transcripts=ENST00000427496.1,ENST00000427496.1;gene_id=NA12877_ch_G0000544;gene_biotype=unprocessed_pseudogene;gene_name=TSPY22P;gene_sources=liftoff;ID=NA12877_ch_G0000544;Name=TSPY22P
NA12877_chrY	CAT	transcript	22993837	22995863	1000	-	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=299.834;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1,ENST00000427496.1;transcript_id=NA12877_ch_T0001622;gene_id=NA12877_ch_G0000544;Parent=NA12877_ch_G0000544;transcript_name=NA12877_ch_T0001622;gene_name=TSPY22P;ID=NA12877_ch_T0001622;Name=TSPY22P
NA12877_chrY	CAT	exon	22993837	22993982	.	-	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1,ENST00000427496.1;transcript_id=NA12877_ch_T0001622;gene_id=NA12877_ch_G0000544;Parent=NA12877_ch_T0001622;transcript_name=NA12877_ch_T0001622;gene_name=TSPY22P;ID=exon:NA12877_ch_T0001622:0;Name=TSPY22P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22993983	22994066	.	-	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1,ENST00000427496.1;transcript_id=NA12877_ch_T0001622;gene_id=NA12877_ch_G0000544;Parent=NA12877_ch_T0001622;transcript_name=NA12877_ch_T0001622;gene_name=TSPY22P;ID=intron:NA12877_ch_T0001622:0;Name=TSPY22P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22994067	22994132	.	-	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1,ENST00000427496.1;transcript_id=NA12877_ch_T0001622;gene_id=NA12877_ch_G0000544;Parent=NA12877_ch_T0001622;transcript_name=NA12877_ch_T0001622;gene_name=TSPY22P;ID=exon:NA12877_ch_T0001622:1;Name=TSPY22P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22994133	22995471	.	-	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1,ENST00000427496.1;transcript_id=NA12877_ch_T0001622;gene_id=NA12877_ch_G0000544;Parent=NA12877_ch_T0001622;transcript_name=NA12877_ch_T0001622;gene_name=TSPY22P;ID=intron:NA12877_ch_T0001622:1;Name=TSPY22P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22995472	22995863	.	-	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1,ENST00000427496.1;transcript_id=NA12877_ch_T0001622;gene_id=NA12877_ch_G0000544;Parent=NA12877_ch_T0001622;transcript_name=NA12877_ch_T0001622;gene_name=TSPY22P;ID=exon:NA12877_ch_T0001622:2;Name=TSPY22P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22996741	23004117	.	+	.	source_gene_common_name=RBMY2FP;source_gene=ENSG00000290336.2;gene_id=NA12877_ch_G0000545;gene_biotype=lncRNA;gene_name=RBMY2FP;gene_sources=liftoff;ID=NA12877_ch_G0000545;Name=RBMY2FP
NA12877_chrY	CAT	transcript	22996741	23004117	1000	+	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001623;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_G0000545;transcript_name=NA12877_ch_T0001623;gene_name=RBMY2FP;ID=NA12877_ch_T0001623;Name=RBMY2FP
NA12877_chrY	CAT	exon	22996741	22996882	.	+	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001623;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_T0001623;transcript_name=NA12877_ch_T0001623;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001623:0;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22996883	22998771	.	+	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001623;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_T0001623;transcript_name=NA12877_ch_T0001623;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001623:0;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22998772	22998884	.	+	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001623;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_T0001623;transcript_name=NA12877_ch_T0001623;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001623:1;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22998885	22999306	.	+	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001623;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_T0001623;transcript_name=NA12877_ch_T0001623;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001623:1;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22999307	22999410	.	+	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001623;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_T0001623;transcript_name=NA12877_ch_T0001623;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001623:2;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22999411	23002404	.	+	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001623;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_T0001623;transcript_name=NA12877_ch_T0001623;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001623:2;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23002405	23004117	.	+	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001623;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_T0001623;transcript_name=NA12877_ch_T0001623;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001623:3;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	22996796	22999023	1000	+	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001624;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_G0000545;transcript_name=NA12877_ch_T0001624;gene_name=RBMY2FP;ID=NA12877_ch_T0001624;Name=RBMY2FP
NA12877_chrY	CAT	exon	22996796	22996882	.	+	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001624;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_T0001624;transcript_name=NA12877_ch_T0001624;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001624:0;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22996883	22997535	.	+	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001624;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_T0001624;transcript_name=NA12877_ch_T0001624;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001624:0;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22997536	22997622	.	+	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001624;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_T0001624;transcript_name=NA12877_ch_T0001624;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001624:1;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22997623	22998771	.	+	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001624;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_T0001624;transcript_name=NA12877_ch_T0001624;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001624:1;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22998772	22999023	.	+	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001624;gene_id=NA12877_ch_G0000545;Parent=NA12877_ch_T0001624;transcript_name=NA12877_ch_T0001624;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001624:2;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	22998776	23009737	.	+	.	source_gene_common_name=RBMY2FP;source_gene=ENSG00000243040.7;gene_id=NA12877_ch_G0000546;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=NA12877_ch_G0000546;Name=RBMY2FP
NA12877_chrY	CAT	transcript	22998776	23009737	1000	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_G0000546;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=NA12877_ch_T0001625;Name=RBMY2FP
NA12877_chrY	CAT	exon	22998776	22998884	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001625:0;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22998885	22999306	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001625:0;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	22999307	22999410	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001625:1;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	22999411	23002404	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001625:1;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23002405	23002582	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001625:2;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23002583	23004506	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001625:2;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23004507	23004659	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001625:3;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23004660	23006694	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001625:3;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23006695	23006809	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001625:4;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23006810	23008274	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001625:4;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23008275	23008376	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001625:5;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23008377	23008741	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001625:5;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23008742	23008852	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001625:6;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23008853	23008932	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001625:6;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23008933	23009021	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001625:7;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23009022	23009435	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=intron:NA12877_ch_T0001625:7;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23009436	23009737	.	+	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=NA12877_ch_T0001625;gene_id=NA12877_ch_G0000546;Parent=NA12877_ch_T0001625;transcript_name=NA12877_ch_T0001625;gene_name=RBMY2FP;ID=exon:NA12877_ch_T0001625:8;Name=RBMY2FP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23018364	23020412	.	+	.	source_gene_common_name=TTTY25P;source_gene=ENSG00000259247.1;alternative_source_transcripts=ENST00000558356.1,ENST00000558356.1;gene_id=NA12877_ch_G0000547;gene_biotype=unprocessed_pseudogene;gene_name=TTTY25P;gene_sources=liftoff;ID=NA12877_ch_G0000547;Name=TTTY25P
NA12877_chrY	CAT	transcript	23018364	23020412	1000	+	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1,ENST00000558356.1;transcript_id=NA12877_ch_T0001626;gene_id=NA12877_ch_G0000547;Parent=NA12877_ch_G0000547;transcript_name=NA12877_ch_T0001626;gene_name=TTTY25P;ID=NA12877_ch_T0001626;Name=TTTY25P
NA12877_chrY	CAT	exon	23018364	23018936	.	+	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1,ENST00000558356.1;transcript_id=NA12877_ch_T0001626;gene_id=NA12877_ch_G0000547;Parent=NA12877_ch_T0001626;transcript_name=NA12877_ch_T0001626;gene_name=TTTY25P;ID=exon:NA12877_ch_T0001626:0;Name=TTTY25P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23018937	23019480	.	+	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1,ENST00000558356.1;transcript_id=NA12877_ch_T0001626;gene_id=NA12877_ch_G0000547;Parent=NA12877_ch_T0001626;transcript_name=NA12877_ch_T0001626;gene_name=TTTY25P;ID=intron:NA12877_ch_T0001626:0;Name=TTTY25P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23019481	23020412	.	+	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1,ENST00000558356.1;transcript_id=NA12877_ch_T0001626;gene_id=NA12877_ch_G0000547;Parent=NA12877_ch_T0001626;transcript_name=NA12877_ch_T0001626;gene_name=TTTY25P;ID=exon:NA12877_ch_T0001626:1;Name=TTTY25P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23070619	23075902	.	-	.	source_gene_common_name=RBMY2UP;source_gene=ENSG00000225615.1;gene_id=NA12877_ch_G0000548;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2UP;gene_sources=liftoff;ID=NA12877_ch_G0000548;Name=RBMY2UP
NA12877_chrY	CAT	transcript	23070619	23075902	1000	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;transcript_id=NA12877_ch_T0001627;gene_id=NA12877_ch_G0000548;Parent=NA12877_ch_G0000548;transcript_name=NA12877_ch_T0001627;gene_name=RBMY2UP;ID=NA12877_ch_T0001627;Name=RBMY2UP
NA12877_chrY	CAT	exon	23070619	23070731	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;transcript_id=NA12877_ch_T0001627;gene_id=NA12877_ch_G0000548;Parent=NA12877_ch_T0001627;transcript_name=NA12877_ch_T0001627;gene_name=RBMY2UP;ID=exon:NA12877_ch_T0001627:0;Name=RBMY2UP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23070732	23075288	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;transcript_id=NA12877_ch_T0001627;gene_id=NA12877_ch_G0000548;Parent=NA12877_ch_T0001627;transcript_name=NA12877_ch_T0001627;gene_name=RBMY2UP;ID=intron:NA12877_ch_T0001627:0;Name=RBMY2UP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23075289	23075391	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;transcript_id=NA12877_ch_T0001627;gene_id=NA12877_ch_G0000548;Parent=NA12877_ch_T0001627;transcript_name=NA12877_ch_T0001627;gene_name=RBMY2UP;ID=exon:NA12877_ch_T0001627:1;Name=RBMY2UP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23075392	23075794	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;transcript_id=NA12877_ch_T0001627;gene_id=NA12877_ch_G0000548;Parent=NA12877_ch_T0001627;transcript_name=NA12877_ch_T0001627;gene_name=RBMY2UP;ID=intron:NA12877_ch_T0001627:1;Name=RBMY2UP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23075795	23075902	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;transcript_id=NA12877_ch_T0001627;gene_id=NA12877_ch_G0000548;Parent=NA12877_ch_T0001627;transcript_name=NA12877_ch_T0001627;gene_name=RBMY2UP;ID=exon:NA12877_ch_T0001627:2;Name=RBMY2UP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23088316	23090481	.	-	.	source_gene_common_name=TSPY21P;source_gene=ENSG00000237902.1;alternative_source_transcripts=ENST00000433481.1,ENST00000433481.1;gene_id=NA12877_ch_G0000549;gene_biotype=unprocessed_pseudogene;gene_name=TSPY21P;gene_sources=liftoff;ID=NA12877_ch_G0000549;Name=TSPY21P
NA12877_chrY	CAT	transcript	23088316	23090481	1000	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1,ENST00000433481.1;transcript_id=NA12877_ch_T0001628;gene_id=NA12877_ch_G0000549;Parent=NA12877_ch_G0000549;transcript_name=NA12877_ch_T0001628;gene_name=TSPY21P;ID=NA12877_ch_T0001628;Name=TSPY21P
NA12877_chrY	CAT	exon	23088316	23088357	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1,ENST00000433481.1;transcript_id=NA12877_ch_T0001628;gene_id=NA12877_ch_G0000549;Parent=NA12877_ch_T0001628;transcript_name=NA12877_ch_T0001628;gene_name=TSPY21P;ID=exon:NA12877_ch_T0001628:0;Name=TSPY21P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23088358	23088474	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1,ENST00000433481.1;transcript_id=NA12877_ch_T0001628;gene_id=NA12877_ch_G0000549;Parent=NA12877_ch_T0001628;transcript_name=NA12877_ch_T0001628;gene_name=TSPY21P;ID=intron:NA12877_ch_T0001628:0;Name=TSPY21P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23088475	23088618	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1,ENST00000433481.1;transcript_id=NA12877_ch_T0001628;gene_id=NA12877_ch_G0000549;Parent=NA12877_ch_T0001628;transcript_name=NA12877_ch_T0001628;gene_name=TSPY21P;ID=exon:NA12877_ch_T0001628:1;Name=TSPY21P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23088619	23088704	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1,ENST00000433481.1;transcript_id=NA12877_ch_T0001628;gene_id=NA12877_ch_G0000549;Parent=NA12877_ch_T0001628;transcript_name=NA12877_ch_T0001628;gene_name=TSPY21P;ID=intron:NA12877_ch_T0001628:1;Name=TSPY21P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23088705	23088770	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1,ENST00000433481.1;transcript_id=NA12877_ch_T0001628;gene_id=NA12877_ch_G0000549;Parent=NA12877_ch_T0001628;transcript_name=NA12877_ch_T0001628;gene_name=TSPY21P;ID=exon:NA12877_ch_T0001628:2;Name=TSPY21P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23088771	23089014	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1,ENST00000433481.1;transcript_id=NA12877_ch_T0001628;gene_id=NA12877_ch_G0000549;Parent=NA12877_ch_T0001628;transcript_name=NA12877_ch_T0001628;gene_name=TSPY21P;ID=intron:NA12877_ch_T0001628:2;Name=TSPY21P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23089015	23089099	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1,ENST00000433481.1;transcript_id=NA12877_ch_T0001628;gene_id=NA12877_ch_G0000549;Parent=NA12877_ch_T0001628;transcript_name=NA12877_ch_T0001628;gene_name=TSPY21P;ID=exon:NA12877_ch_T0001628:3;Name=TSPY21P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23089100	23090087	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1,ENST00000433481.1;transcript_id=NA12877_ch_T0001628;gene_id=NA12877_ch_G0000549;Parent=NA12877_ch_T0001628;transcript_name=NA12877_ch_T0001628;gene_name=TSPY21P;ID=intron:NA12877_ch_T0001628:3;Name=TSPY21P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23090088	23090481	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1,ENST00000433481.1;transcript_id=NA12877_ch_T0001628;gene_id=NA12877_ch_G0000549;Parent=NA12877_ch_T0001628;transcript_name=NA12877_ch_T0001628;gene_name=TSPY21P;ID=exon:NA12877_ch_T0001628:4;Name=TSPY21P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23091323	23105795	.	+	.	source_gene_common_name=RBMY1J;source_gene=ENSG00000226941.9;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;gene_id=NA12877_ch_G0000550;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=liftoff;ID=NA12877_ch_G0000550;Name=RBMY1J
NA12877_chrY	CAT	transcript	23091323	23105795	100	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_G0000550;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=NA12877_ch_T0001629;Name=RBMY1J
NA12877_chrY	CAT	exon	23091323	23091496	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001629:0;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23091497	23093357	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001629:0;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23093358	23093470	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001629:1;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23093362	23093470	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=CDS:NA12877_ch_T0001629:0;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	23093362	23093364	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=start_codon:NA12877_ch_T0001629;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23093471	23093938	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001629:1;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23093939	23094042	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001629:2;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23093939	23094042	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=CDS:NA12877_ch_T0001629:1;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23094043	23097065	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001629:2;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23097066	23097243	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001629:3;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23097066	23097243	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=CDS:NA12877_ch_T0001629:2;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23097244	23099158	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001629:3;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23099159	23099311	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001629:4;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23099159	23099311	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=CDS:NA12877_ch_T0001629:3;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23099312	23101321	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001629:4;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23101322	23101436	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001629:5;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23101322	23101436	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=CDS:NA12877_ch_T0001629:4;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23101437	23102391	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001629:5;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23102392	23102502	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001629:6;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23102392	23102502	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=CDS:NA12877_ch_T0001629:5;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23102503	23102942	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001629:6;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23102943	23103053	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001629:7;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23102943	23103053	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=CDS:NA12877_ch_T0001629:6;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23103054	23103487	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001629:7;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23103488	23103598	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001629:8;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23103488	23103598	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=CDS:NA12877_ch_T0001629:7;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23103599	23104521	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001629:8;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23104522	23104632	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001629:9;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23104522	23104632	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=CDS:NA12877_ch_T0001629:8;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23104633	23104718	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001629:9;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23104719	23104807	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001629:10;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23104719	23104807	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=CDS:NA12877_ch_T0001629:9;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23104808	23105218	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001629:10;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23105219	23105795	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001629:11;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23105219	23105517	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=CDS:NA12877_ch_T0001629:10;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	23105515	23105517	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6,ENST00000250831.6;transcript_id=NA12877_ch_T0001629;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001629;transcript_name=NA12877_ch_T0001629;gene_name=RBMY1J;ID=stop_codon:NA12877_ch_T0001629;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23091374	23105795	1000	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_G0000550;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=NA12877_ch_T0001630;Name=RBMY1J
NA12877_chrY	CAT	exon	23091374	23091496	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001630:0;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23091497	23093357	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001630:0;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23093358	23093470	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001630:1;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23093471	23093938	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001630:1;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23093939	23094042	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001630:2;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23094043	23099158	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001630:2;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23099159	23099311	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001630:3;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23099312	23101321	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001630:3;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23101322	23101436	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001630:4;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23101437	23102391	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001630:4;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23102392	23102502	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001630:5;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23102503	23102942	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001630:5;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23102943	23103053	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001630:6;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23103054	23103487	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001630:6;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23103488	23103598	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001630:7;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23103599	23104521	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001630:7;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23104522	23104632	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001630:8;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23104633	23104718	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001630:8;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23104719	23104807	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001630:9;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23104808	23105218	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=intron:NA12877_ch_T0001630:9;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23105219	23105795	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000470460.1;transcript_id=NA12877_ch_T0001630;gene_id=NA12877_ch_G0000550;Parent=NA12877_ch_T0001630;transcript_name=NA12877_ch_T0001630;gene_name=RBMY1J;ID=exon:NA12877_ch_T0001630:10;Name=RBMY1J;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23126838	23202557	.	+	.	source_gene_common_name=ENSG00000235059;source_gene=ENSG00000235059.7;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;gene_id=NA12877_ch_G0000551;gene_biotype=lncRNA;gene_name=ENSG00000235059;gene_sources=liftoff;ID=NA12877_ch_G0000551;Name=ENSG00000235059
NA12877_chrY	CAT	transcript	23126838	23172634	1000	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_G0000551;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=NA12877_ch_T0001631;Name=ENSG00000235059
NA12877_chrY	CAT	exon	23126838	23127054	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:0;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23127055	23127388	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001631:0;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23127389	23127698	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:1;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23127699	23134245	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001631:1;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23134246	23134386	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:2;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23134387	23144356	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001631:2;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23144357	23144579	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:3;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23144580	23144887	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001631:3;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23144888	23144973	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:4;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23144974	23152152	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001631:4;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23152153	23152271	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:5;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23152272	23152701	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001631:5;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23152702	23153055	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:6;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23153056	23166684	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001631:6;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23166685	23166774	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:7;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23166775	23168240	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001631:7;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23168241	23168576	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:8;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23168577	23170376	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001631:8;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23170377	23170462	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:9;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23170463	23170582	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001631:9;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23170583	23170779	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:10;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23170780	23171323	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001631:10;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23171324	23171441	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:11;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23171442	23171956	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001631:11;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23171957	23172634	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6,ENST00000446299.6;transcript_id=NA12877_ch_T0001631;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001631;transcript_name=NA12877_ch_T0001631;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001631:12;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23152859	23172821	1000	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1,ENST00000801163.1;transcript_id=NA12877_ch_T0001634;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_G0000551;transcript_name=NA12877_ch_T0001634;gene_name=ENSG00000235059;ID=NA12877_ch_T0001634;Name=ENSG00000235059
NA12877_chrY	CAT	exon	23152859	23153055	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1,ENST00000801163.1;transcript_id=NA12877_ch_T0001634;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001634;transcript_name=NA12877_ch_T0001634;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001634:0;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23153056	23171319	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1,ENST00000801163.1;transcript_id=NA12877_ch_T0001634;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001634;transcript_name=NA12877_ch_T0001634;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001634:0;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23171320	23171441	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1,ENST00000801163.1;transcript_id=NA12877_ch_T0001634;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001634;transcript_name=NA12877_ch_T0001634;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001634:1;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23171442	23171956	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1,ENST00000801163.1;transcript_id=NA12877_ch_T0001634;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001634;transcript_name=NA12877_ch_T0001634;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001634:1;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23171957	23172821	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1,ENST00000801163.1;transcript_id=NA12877_ch_T0001634;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001634;transcript_name=NA12877_ch_T0001634;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001634:2;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23166613	23172814	1000	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1,ENST00000801164.1;transcript_id=NA12877_ch_T0001635;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_G0000551;transcript_name=NA12877_ch_T0001635;gene_name=ENSG00000235059;ID=NA12877_ch_T0001635;Name=ENSG00000235059
NA12877_chrY	CAT	exon	23166613	23166774	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1,ENST00000801164.1;transcript_id=NA12877_ch_T0001635;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001635;transcript_name=NA12877_ch_T0001635;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001635:0;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23166775	23168240	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1,ENST00000801164.1;transcript_id=NA12877_ch_T0001635;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001635;transcript_name=NA12877_ch_T0001635;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001635:0;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23168241	23168576	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1,ENST00000801164.1;transcript_id=NA12877_ch_T0001635;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001635;transcript_name=NA12877_ch_T0001635;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001635:1;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23168577	23171319	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1,ENST00000801164.1;transcript_id=NA12877_ch_T0001635;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001635;transcript_name=NA12877_ch_T0001635;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001635:1;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23171320	23171441	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1,ENST00000801164.1;transcript_id=NA12877_ch_T0001635;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001635;transcript_name=NA12877_ch_T0001635;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001635:2;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23171442	23171956	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1,ENST00000801164.1;transcript_id=NA12877_ch_T0001635;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001635;transcript_name=NA12877_ch_T0001635;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001635:2;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23171957	23172814	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1,ENST00000801164.1;transcript_id=NA12877_ch_T0001635;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001635;transcript_name=NA12877_ch_T0001635;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001635:3;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23168457	23173512	1000	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000439653.1;transcript_id=NA12877_ch_T0001636;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_G0000551;transcript_name=NA12877_ch_T0001636;gene_name=ENSG00000235059;ID=NA12877_ch_T0001636;Name=ENSG00000235059
NA12877_chrY	CAT	exon	23168457	23168576	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000439653.1;transcript_id=NA12877_ch_T0001636;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001636;transcript_name=NA12877_ch_T0001636;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001636:0;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23168577	23171323	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000439653.1;transcript_id=NA12877_ch_T0001636;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001636;transcript_name=NA12877_ch_T0001636;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001636:0;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23171324	23171441	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000439653.1;transcript_id=NA12877_ch_T0001636;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001636;transcript_name=NA12877_ch_T0001636;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001636:1;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23171442	23171956	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000439653.1;transcript_id=NA12877_ch_T0001636;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001636;transcript_name=NA12877_ch_T0001636;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001636:1;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23171957	23172221	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000439653.1;transcript_id=NA12877_ch_T0001636;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001636;transcript_name=NA12877_ch_T0001636;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001636:2;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23172222	23173270	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000439653.1;transcript_id=NA12877_ch_T0001636;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001636;transcript_name=NA12877_ch_T0001636;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001636:2;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23173271	23173512	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000439653.1;transcript_id=NA12877_ch_T0001636;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001636;transcript_name=NA12877_ch_T0001636;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001636:3;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23171957	23202557	1000	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303728.6;transcript_id=NA12877_ch_T0001637;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_G0000551;transcript_name=NA12877_ch_T0001637;gene_name=ENSG00000235059;ID=NA12877_ch_T0001637;Name=ENSG00000235059
NA12877_chrY	CAT	exon	23171957	23172221	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303728.6;transcript_id=NA12877_ch_T0001637;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001637;transcript_name=NA12877_ch_T0001637;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001637:0;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23172222	23178314	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303728.6;transcript_id=NA12877_ch_T0001637;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001637;transcript_name=NA12877_ch_T0001637;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001637:0;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23178315	23178403	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303728.6;transcript_id=NA12877_ch_T0001637;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001637;transcript_name=NA12877_ch_T0001637;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001637:1;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23178404	23178504	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303728.6;transcript_id=NA12877_ch_T0001637;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001637;transcript_name=NA12877_ch_T0001637;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001637:1;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23178505	23178591	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303728.6;transcript_id=NA12877_ch_T0001637;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001637;transcript_name=NA12877_ch_T0001637;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001637:2;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23178592	23189432	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303728.6;transcript_id=NA12877_ch_T0001637;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001637;transcript_name=NA12877_ch_T0001637;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001637:2;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23189433	23189553	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303728.6;transcript_id=NA12877_ch_T0001637;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001637;transcript_name=NA12877_ch_T0001637;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001637:3;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23189554	23192128	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303728.6;transcript_id=NA12877_ch_T0001637;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001637;transcript_name=NA12877_ch_T0001637;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001637:3;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23192129	23192244	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303728.6;transcript_id=NA12877_ch_T0001637;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001637;transcript_name=NA12877_ch_T0001637;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001637:4;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23192245	23201731	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303728.6;transcript_id=NA12877_ch_T0001637;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001637;transcript_name=NA12877_ch_T0001637;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001637:4;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23201732	23202557	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303728.6;transcript_id=NA12877_ch_T0001637;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001637;transcript_name=NA12877_ch_T0001637;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001637:5;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23171957	23202557	1000	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_G0000551;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=NA12877_ch_T0001638;Name=ENSG00000235059
NA12877_chrY	CAT	exon	23171957	23172221	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001638:0;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23172222	23178314	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001638:0;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23178315	23178403	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001638:1;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23178404	23178504	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001638:1;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23178505	23178591	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001638:2;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23178592	23189432	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001638:2;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23189433	23189553	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001638:3;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23189554	23192128	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001638:3;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23192129	23192244	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001638:4;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23192245	23200557	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001638:4;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23200558	23200672	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001638:5;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23200673	23201731	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=intron:NA12877_ch_T0001638:5;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23201732	23202557	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000477123.2;transcript_id=NA12877_ch_T0001638;gene_id=NA12877_ch_G0000551;Parent=NA12877_ch_T0001638;transcript_name=NA12877_ch_T0001638;gene_name=ENSG00000235059;ID=exon:NA12877_ch_T0001638:6;Name=ENSG00000235059;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23127507	23142394	.	-	.	source_gene_common_name=TTTY6;source_gene=ENSG00000131538.8;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;gene_id=NA12877_ch_G0000552;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=NA12877_ch_G0000552;Name=TTTY6
NA12877_chrY	CAT	transcript	23127507	23142394	1000	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_G0000552;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=NA12877_ch_T0001632;Name=TTTY6
NA12877_chrY	CAT	exon	23127507	23127745	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=exon:NA12877_ch_T0001632:0;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23127746	23128902	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=intron:NA12877_ch_T0001632:0;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23128903	23129040	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=exon:NA12877_ch_T0001632:1;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23129041	23129258	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=intron:NA12877_ch_T0001632:1;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23129259	23129372	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=exon:NA12877_ch_T0001632:2;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23129373	23132537	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=intron:NA12877_ch_T0001632:2;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23132538	23132698	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=exon:NA12877_ch_T0001632:3;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23132699	23134980	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=intron:NA12877_ch_T0001632:3;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23134981	23135142	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=exon:NA12877_ch_T0001632:4;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23135143	23139882	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=intron:NA12877_ch_T0001632:4;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23139883	23139956	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=exon:NA12877_ch_T0001632:5;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23139957	23142339	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=intron:NA12877_ch_T0001632:5;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23142340	23142394	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253838.4;transcript_id=NA12877_ch_T0001632;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001632;transcript_name=NA12877_ch_T0001632;gene_name=TTTY6;ID=exon:NA12877_ch_T0001632:6;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23127509	23131648	1000	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1,ENST00000769610.1;transcript_id=NA12877_ch_T0001633;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_G0000552;transcript_name=NA12877_ch_T0001633;gene_name=TTTY6;ID=NA12877_ch_T0001633;Name=TTTY6
NA12877_chrY	CAT	exon	23127509	23127745	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1,ENST00000769610.1;transcript_id=NA12877_ch_T0001633;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001633;transcript_name=NA12877_ch_T0001633;gene_name=TTTY6;ID=exon:NA12877_ch_T0001633:0;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23127746	23131367	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1,ENST00000769610.1;transcript_id=NA12877_ch_T0001633;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001633;transcript_name=NA12877_ch_T0001633;gene_name=TTTY6;ID=intron:NA12877_ch_T0001633:0;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23131368	23131648	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1,ENST00000769610.1;transcript_id=NA12877_ch_T0001633;gene_id=NA12877_ch_G0000552;Parent=NA12877_ch_T0001633;transcript_name=NA12877_ch_T0001633;gene_name=TTTY6;ID=exon:NA12877_ch_T0001633:1;Name=TTTY6;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23205162	23205493	.	-	.	source_gene_common_name=ELOCP8;source_gene=ENSG00000234131.1;alternative_source_transcripts=ENST00000439309.1,ENST00000439309.1;gene_id=NA12877_ch_G0000553;gene_biotype=processed_pseudogene;gene_name=ELOCP8;gene_sources=liftoff;ID=NA12877_ch_G0000553;Name=ELOCP8
NA12877_chrY	CAT	transcript	23205162	23205493	1000	-	.	source_transcript=ENST00000439309.1;source_transcript_name=ELOCP8-201;source_gene=ENSG00000234131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439309.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP8;alternative_source_transcripts=ENST00000439309.1,ENST00000439309.1;transcript_id=NA12877_ch_T0001639;gene_id=NA12877_ch_G0000553;Parent=NA12877_ch_G0000553;transcript_name=NA12877_ch_T0001639;gene_name=ELOCP8;ID=NA12877_ch_T0001639;Name=ELOCP8
NA12877_chrY	CAT	exon	23205162	23205493	.	-	.	source_transcript=ENST00000439309.1;source_transcript_name=ELOCP8-201;source_gene=ENSG00000234131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439309.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP8;alternative_source_transcripts=ENST00000439309.1,ENST00000439309.1;transcript_id=NA12877_ch_T0001639;gene_id=NA12877_ch_G0000553;Parent=NA12877_ch_T0001639;transcript_name=NA12877_ch_T0001639;gene_name=ELOCP8;ID=exon:NA12877_ch_T0001639:0;Name=ELOCP8;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23208601	23209615	.	-	.	source_gene_common_name=CDY13P;source_gene=ENSG00000224873.1;alternative_source_transcripts=ENST00000445813.1,ENST00000445813.1;gene_id=NA12877_ch_G0000554;gene_biotype=unprocessed_pseudogene;gene_name=CDY13P;gene_sources=liftoff;ID=NA12877_ch_G0000554;Name=CDY13P
NA12877_chrY	CAT	transcript	23208601	23209615	1000	-	.	source_transcript=ENST00000445813.1;source_transcript_name=CDY13P-201;source_gene=ENSG00000224873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445813.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY13P;alternative_source_transcripts=ENST00000445813.1,ENST00000445813.1;transcript_id=NA12877_ch_T0001640;gene_id=NA12877_ch_G0000554;Parent=NA12877_ch_G0000554;transcript_name=NA12877_ch_T0001640;gene_name=CDY13P;ID=NA12877_ch_T0001640;Name=CDY13P
NA12877_chrY	CAT	exon	23208601	23209615	.	-	.	source_transcript=ENST00000445813.1;source_transcript_name=CDY13P-201;source_gene=ENSG00000224873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445813.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY13P;alternative_source_transcripts=ENST00000445813.1,ENST00000445813.1;transcript_id=NA12877_ch_T0001640;gene_id=NA12877_ch_G0000554;Parent=NA12877_ch_T0001640;transcript_name=NA12877_ch_T0001640;gene_name=CDY13P;ID=exon:NA12877_ch_T0001640:0;Name=CDY13P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23216202	23224560	.	+	.	source_gene_common_name=USP9YP24;source_gene=ENSG00000230814.1;alternative_source_transcripts=ENST00000434374.1,ENST00000434374.1;gene_id=NA12877_ch_G0000555;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP24;gene_sources=liftoff;ID=NA12877_ch_G0000555;Name=USP9YP24
NA12877_chrY	CAT	transcript	23216202	23224560	1000	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1,ENST00000434374.1;transcript_id=NA12877_ch_T0001641;gene_id=NA12877_ch_G0000555;Parent=NA12877_ch_G0000555;transcript_name=NA12877_ch_T0001641;gene_name=USP9YP24;ID=NA12877_ch_T0001641;Name=USP9YP24
NA12877_chrY	CAT	exon	23216202	23216422	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1,ENST00000434374.1;transcript_id=NA12877_ch_T0001641;gene_id=NA12877_ch_G0000555;Parent=NA12877_ch_T0001641;transcript_name=NA12877_ch_T0001641;gene_name=USP9YP24;ID=exon:NA12877_ch_T0001641:0;Name=USP9YP24;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23216423	23218224	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1,ENST00000434374.1;transcript_id=NA12877_ch_T0001641;gene_id=NA12877_ch_G0000555;Parent=NA12877_ch_T0001641;transcript_name=NA12877_ch_T0001641;gene_name=USP9YP24;ID=intron:NA12877_ch_T0001641:0;Name=USP9YP24;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23218225	23218343	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1,ENST00000434374.1;transcript_id=NA12877_ch_T0001641;gene_id=NA12877_ch_G0000555;Parent=NA12877_ch_T0001641;transcript_name=NA12877_ch_T0001641;gene_name=USP9YP24;ID=exon:NA12877_ch_T0001641:1;Name=USP9YP24;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23218344	23220129	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1,ENST00000434374.1;transcript_id=NA12877_ch_T0001641;gene_id=NA12877_ch_G0000555;Parent=NA12877_ch_T0001641;transcript_name=NA12877_ch_T0001641;gene_name=USP9YP24;ID=intron:NA12877_ch_T0001641:1;Name=USP9YP24;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23220130	23220318	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1,ENST00000434374.1;transcript_id=NA12877_ch_T0001641;gene_id=NA12877_ch_G0000555;Parent=NA12877_ch_T0001641;transcript_name=NA12877_ch_T0001641;gene_name=USP9YP24;ID=exon:NA12877_ch_T0001641:2;Name=USP9YP24;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23220319	23222676	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1,ENST00000434374.1;transcript_id=NA12877_ch_T0001641;gene_id=NA12877_ch_G0000555;Parent=NA12877_ch_T0001641;transcript_name=NA12877_ch_T0001641;gene_name=USP9YP24;ID=intron:NA12877_ch_T0001641:2;Name=USP9YP24;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23222677	23222805	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1,ENST00000434374.1;transcript_id=NA12877_ch_T0001641;gene_id=NA12877_ch_G0000555;Parent=NA12877_ch_T0001641;transcript_name=NA12877_ch_T0001641;gene_name=USP9YP24;ID=exon:NA12877_ch_T0001641:3;Name=USP9YP24;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23222806	23224521	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1,ENST00000434374.1;transcript_id=NA12877_ch_T0001641;gene_id=NA12877_ch_G0000555;Parent=NA12877_ch_T0001641;transcript_name=NA12877_ch_T0001641;gene_name=USP9YP24;ID=intron:NA12877_ch_T0001641:3;Name=USP9YP24;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23224522	23224560	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1,ENST00000434374.1;transcript_id=NA12877_ch_T0001641;gene_id=NA12877_ch_G0000555;Parent=NA12877_ch_T0001641;transcript_name=NA12877_ch_T0001641;gene_name=USP9YP24;ID=exon:NA12877_ch_T0001641:4;Name=USP9YP24;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23224840	23273183	.	+	.	source_gene_common_name=ENSG00000300637;source_gene=ENSG00000300637.1;gene_id=NA12877_ch_G0000556;gene_biotype=lncRNA;gene_name=ENSG00000300637;gene_sources=liftoff;ID=NA12877_ch_G0000556;Name=ENSG00000300637
NA12877_chrY	CAT	transcript	23224840	23265684	1000	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001642;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_G0000556;transcript_name=NA12877_ch_T0001642;gene_name=ENSG00000300637;ID=NA12877_ch_T0001642;Name=ENSG00000300637
NA12877_chrY	CAT	exon	23224840	23225161	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001642;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_T0001642;transcript_name=NA12877_ch_T0001642;gene_name=ENSG00000300637;ID=exon:NA12877_ch_T0001642:0;Name=ENSG00000300637;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23225162	23229726	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001642;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_T0001642;transcript_name=NA12877_ch_T0001642;gene_name=ENSG00000300637;ID=intron:NA12877_ch_T0001642:0;Name=ENSG00000300637;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23229727	23229888	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001642;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_T0001642;transcript_name=NA12877_ch_T0001642;gene_name=ENSG00000300637;ID=exon:NA12877_ch_T0001642:1;Name=ENSG00000300637;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23229889	23265055	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001642;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_T0001642;transcript_name=NA12877_ch_T0001642;gene_name=ENSG00000300637;ID=intron:NA12877_ch_T0001642:1;Name=ENSG00000300637;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23265056	23265684	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001642;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_T0001642;transcript_name=NA12877_ch_T0001642;gene_name=ENSG00000300637;ID=exon:NA12877_ch_T0001642:2;Name=ENSG00000300637;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23224900	23273183	1000	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001643;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_G0000556;transcript_name=NA12877_ch_T0001643;gene_name=ENSG00000300637;ID=NA12877_ch_T0001643;Name=ENSG00000300637
NA12877_chrY	CAT	exon	23224900	23225161	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001643;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_T0001643;transcript_name=NA12877_ch_T0001643;gene_name=ENSG00000300637;ID=exon:NA12877_ch_T0001643:0;Name=ENSG00000300637;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23225162	23229726	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001643;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_T0001643;transcript_name=NA12877_ch_T0001643;gene_name=ENSG00000300637;ID=intron:NA12877_ch_T0001643:0;Name=ENSG00000300637;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23229727	23229888	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001643;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_T0001643;transcript_name=NA12877_ch_T0001643;gene_name=ENSG00000300637;ID=exon:NA12877_ch_T0001643:1;Name=ENSG00000300637;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23229889	23265055	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001643;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_T0001643;transcript_name=NA12877_ch_T0001643;gene_name=ENSG00000300637;ID=intron:NA12877_ch_T0001643:1;Name=ENSG00000300637;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23265056	23265358	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001643;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_T0001643;transcript_name=NA12877_ch_T0001643;gene_name=ENSG00000300637;ID=exon:NA12877_ch_T0001643:2;Name=ENSG00000300637;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23265359	23272908	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001643;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_T0001643;transcript_name=NA12877_ch_T0001643;gene_name=ENSG00000300637;ID=intron:NA12877_ch_T0001643:2;Name=ENSG00000300637;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23272909	23273183	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=NA12877_ch_T0001643;gene_id=NA12877_ch_G0000556;Parent=NA12877_ch_T0001643;transcript_name=NA12877_ch_T0001643;gene_name=ENSG00000300637;ID=exon:NA12877_ch_T0001643:3;Name=ENSG00000300637;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23224968	23225770	.	+	.	source_gene_common_name=HSFY7P;source_gene=ENSG00000228571.1;gene_id=NA12877_ch_G0000557;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY7P;gene_sources=liftoff;ID=NA12877_ch_G0000557;Name=HSFY7P
NA12877_chrY	CAT	transcript	23224968	23225770	1000	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=NA12877_ch_T0001644;gene_id=NA12877_ch_G0000557;Parent=NA12877_ch_G0000557;transcript_name=NA12877_ch_T0001644;gene_name=HSFY7P;ID=NA12877_ch_T0001644;Name=HSFY7P
NA12877_chrY	CAT	exon	23224968	23225126	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=NA12877_ch_T0001644;gene_id=NA12877_ch_G0000557;Parent=NA12877_ch_T0001644;transcript_name=NA12877_ch_T0001644;gene_name=HSFY7P;ID=exon:NA12877_ch_T0001644:0;Name=HSFY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23225127	23225611	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=NA12877_ch_T0001644;gene_id=NA12877_ch_G0000557;Parent=NA12877_ch_T0001644;transcript_name=NA12877_ch_T0001644;gene_name=HSFY7P;ID=intron:NA12877_ch_T0001644:0;Name=HSFY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23225612	23225770	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=NA12877_ch_T0001644;gene_id=NA12877_ch_G0000557;Parent=NA12877_ch_T0001644;transcript_name=NA12877_ch_T0001644;gene_name=HSFY7P;ID=exon:NA12877_ch_T0001644:1;Name=HSFY7P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23242826	23245994	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=NA12877_ch_G0000558;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=NA12877_ch_G0000558;Name=ENSG00000295422
NA12877_chrY	CAT	transcript	23242826	23245994	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001645;gene_id=NA12877_ch_G0000558;Parent=NA12877_ch_G0000558;transcript_name=NA12877_ch_T0001645;gene_name=ENSG00000295422;ID=NA12877_ch_T0001645;Name=ENSG00000295422
NA12877_chrY	CAT	exon	23242826	23244170	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001645;gene_id=NA12877_ch_G0000558;Parent=NA12877_ch_T0001645;transcript_name=NA12877_ch_T0001645;gene_name=ENSG00000295422;ID=exon:NA12877_ch_T0001645:0;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23244171	23245705	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001645;gene_id=NA12877_ch_G0000558;Parent=NA12877_ch_T0001645;transcript_name=NA12877_ch_T0001645;gene_name=ENSG00000295422;ID=intron:NA12877_ch_T0001645:0;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23245706	23245766	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001645;gene_id=NA12877_ch_G0000558;Parent=NA12877_ch_T0001645;transcript_name=NA12877_ch_T0001645;gene_name=ENSG00000295422;ID=exon:NA12877_ch_T0001645:1;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23245767	23245883	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001645;gene_id=NA12877_ch_G0000558;Parent=NA12877_ch_T0001645;transcript_name=NA12877_ch_T0001645;gene_name=ENSG00000295422;ID=intron:NA12877_ch_T0001645:1;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23245884	23245994	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001645;gene_id=NA12877_ch_G0000558;Parent=NA12877_ch_T0001645;transcript_name=NA12877_ch_T0001645;gene_name=ENSG00000295422;ID=exon:NA12877_ch_T0001645:2;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23268913	23302002	.	-	.	source_gene_common_name=OFD1P9Y;source_gene=ENSG00000230476.1;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;gene_id=NA12877_ch_G0000559;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P9Y;gene_sources=liftoff;ID=NA12877_ch_G0000559;Name=OFD1P9Y
NA12877_chrY	CAT	transcript	23268913	23302002	1000	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_G0000559;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=NA12877_ch_T0001646;Name=OFD1P9Y
NA12877_chrY	CAT	exon	23268913	23269006	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=exon:NA12877_ch_T0001646:0;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23269007	23269304	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=intron:NA12877_ch_T0001646:0;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23269305	23269371	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=exon:NA12877_ch_T0001646:1;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23269372	23270567	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=intron:NA12877_ch_T0001646:1;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23270568	23270722	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=exon:NA12877_ch_T0001646:2;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23270723	23277355	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=intron:NA12877_ch_T0001646:2;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23277356	23277456	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=exon:NA12877_ch_T0001646:3;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23277457	23296794	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=intron:NA12877_ch_T0001646:3;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23296795	23296905	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=exon:NA12877_ch_T0001646:4;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23296906	23297278	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=intron:NA12877_ch_T0001646:4;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23297279	23297894	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=exon:NA12877_ch_T0001646:5;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23297895	23299611	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=intron:NA12877_ch_T0001646:5;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23299612	23299721	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=exon:NA12877_ch_T0001646:6;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23299722	23300255	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=intron:NA12877_ch_T0001646:6;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23300256	23300385	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=exon:NA12877_ch_T0001646:7;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23300386	23301895	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=intron:NA12877_ch_T0001646:7;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23301896	23302002	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1,ENST00000417699.1;transcript_id=NA12877_ch_T0001646;gene_id=NA12877_ch_G0000559;Parent=NA12877_ch_T0001646;transcript_name=NA12877_ch_T0001646;gene_name=OFD1P9Y;ID=exon:NA12877_ch_T0001646:8;Name=OFD1P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23323498	23328949	.	+	.	source_gene_common_name=ENSG00000305658;source_gene=ENSG00000305658.1;gene_id=NA12877_ch_G0000560;gene_biotype=lncRNA;gene_name=ENSG00000305658;gene_sources=liftoff;ID=NA12877_ch_G0000560;Name=ENSG00000305658
NA12877_chrY	CAT	transcript	23323498	23328949	1000	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001647;gene_id=NA12877_ch_G0000560;Parent=NA12877_ch_G0000560;transcript_name=NA12877_ch_T0001647;gene_name=ENSG00000305658;ID=NA12877_ch_T0001647;Name=ENSG00000305658
NA12877_chrY	CAT	exon	23323498	23323836	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001647;gene_id=NA12877_ch_G0000560;Parent=NA12877_ch_T0001647;transcript_name=NA12877_ch_T0001647;gene_name=ENSG00000305658;ID=exon:NA12877_ch_T0001647:0;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23323837	23325750	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001647;gene_id=NA12877_ch_G0000560;Parent=NA12877_ch_T0001647;transcript_name=NA12877_ch_T0001647;gene_name=ENSG00000305658;ID=intron:NA12877_ch_T0001647:0;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23325751	23325884	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001647;gene_id=NA12877_ch_G0000560;Parent=NA12877_ch_T0001647;transcript_name=NA12877_ch_T0001647;gene_name=ENSG00000305658;ID=exon:NA12877_ch_T0001647:1;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23325885	23327753	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001647;gene_id=NA12877_ch_G0000560;Parent=NA12877_ch_T0001647;transcript_name=NA12877_ch_T0001647;gene_name=ENSG00000305658;ID=intron:NA12877_ch_T0001647:1;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23327754	23327880	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001647;gene_id=NA12877_ch_G0000560;Parent=NA12877_ch_T0001647;transcript_name=NA12877_ch_T0001647;gene_name=ENSG00000305658;ID=exon:NA12877_ch_T0001647:2;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23327881	23328244	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001647;gene_id=NA12877_ch_G0000560;Parent=NA12877_ch_T0001647;transcript_name=NA12877_ch_T0001647;gene_name=ENSG00000305658;ID=intron:NA12877_ch_T0001647:2;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23328245	23328949	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=NA12877_ch_T0001647;gene_id=NA12877_ch_G0000560;Parent=NA12877_ch_T0001647;transcript_name=NA12877_ch_T0001647;gene_name=ENSG00000305658;ID=exon:NA12877_ch_T0001647:3;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23333952	23334248	.	-	.	source_gene_common_name=ENSG00000273589;source_gene=ENSG00000273589.1;alternative_source_transcripts=ENST00000612840.1,ENST00000612840.1;gene_id=NA12877_ch_G0000561;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000273589;gene_sources=liftoff;ID=NA12877_ch_G0000561;Name=ENSG00000273589
NA12877_chrY	CAT	transcript	23333952	23334248	1000	-	.	source_transcript=ENST00000612840.1;source_transcript_name=ENST00000612840;source_gene=ENSG00000273589.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000273589.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000612840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612840.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273589;alternative_source_transcripts=ENST00000612840.1,ENST00000612840.1;transcript_id=NA12877_ch_T0001648;gene_id=NA12877_ch_G0000561;Parent=NA12877_ch_G0000561;transcript_name=NA12877_ch_T0001648;gene_name=ENSG00000273589;ID=NA12877_ch_T0001648;Name=ENSG00000273589
NA12877_chrY	CAT	exon	23333952	23334248	.	-	.	source_transcript=ENST00000612840.1;source_transcript_name=ENST00000612840;source_gene=ENSG00000273589.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000273589.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000612840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612840.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273589;alternative_source_transcripts=ENST00000612840.1,ENST00000612840.1;transcript_id=NA12877_ch_T0001648;gene_id=NA12877_ch_G0000561;Parent=NA12877_ch_T0001648;transcript_name=NA12877_ch_T0001648;gene_name=ENSG00000273589;ID=exon:NA12877_ch_T0001648:0;Name=ENSG00000273589;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23335160	23343643	.	+	.	source_gene_common_name=ENSG00000290348;source_gene=ENSG00000290348.2;gene_id=NA12877_ch_G0000562;gene_biotype=lncRNA;gene_name=ENSG00000290348;gene_sources=liftoff;ID=NA12877_ch_G0000562;Name=ENSG00000290348
NA12877_chrY	CAT	transcript	23335160	23343643	1000	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_G0000562;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=NA12877_ch_T0001649;Name=ENSG00000290348
NA12877_chrY	CAT	exon	23335160	23335313	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001649:0;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23335314	23336067	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=intron:NA12877_ch_T0001649:0;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23336068	23336147	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001649:1;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23336148	23337161	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=intron:NA12877_ch_T0001649:1;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23337162	23337274	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001649:2;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23337275	23337727	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=intron:NA12877_ch_T0001649:2;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23337728	23337831	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001649:3;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23337832	23340539	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=intron:NA12877_ch_T0001649:3;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23340540	23340717	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001649:4;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23340718	23342652	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=intron:NA12877_ch_T0001649:4;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23342653	23342805	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001649:5;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23342806	23343383	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=intron:NA12877_ch_T0001649:5;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23343384	23343643	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001649;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001649;transcript_name=NA12877_ch_T0001649;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001649:6;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23335192	23343643	1000	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_G0000562;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=NA12877_ch_T0001650;Name=ENSG00000290348
NA12877_chrY	CAT	exon	23335192	23335313	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001650:0;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23335314	23335964	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=intron:NA12877_ch_T0001650:0;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23335965	23336147	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001650:1;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23336148	23337161	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=intron:NA12877_ch_T0001650:1;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23337162	23337274	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001650:2;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23337275	23337727	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=intron:NA12877_ch_T0001650:2;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23337728	23337831	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001650:3;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23337832	23340539	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=intron:NA12877_ch_T0001650:3;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23340540	23340717	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001650:4;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23340718	23342652	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=intron:NA12877_ch_T0001650:4;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23342653	23342805	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001650:5;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23342806	23343383	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=intron:NA12877_ch_T0001650:5;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23343384	23343643	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=NA12877_ch_T0001650;gene_id=NA12877_ch_G0000562;Parent=NA12877_ch_T0001650;transcript_name=NA12877_ch_T0001650;gene_name=ENSG00000290348;ID=exon:NA12877_ch_T0001650:6;Name=ENSG00000290348;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23337166	23346799	.	+	.	source_gene_common_name=RBMY2BP;source_gene=ENSG00000224657.10;gene_id=NA12877_ch_G0000563;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2BP;gene_sources=liftoff;ID=NA12877_ch_G0000563;Name=RBMY2BP
NA12877_chrY	CAT	transcript	23337166	23346799	1000	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_G0000563;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=NA12877_ch_T0001651;Name=RBMY2BP
NA12877_chrY	CAT	exon	23337166	23337274	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=exon:NA12877_ch_T0001651:0;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23337275	23337727	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=intron:NA12877_ch_T0001651:0;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23337728	23337831	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=exon:NA12877_ch_T0001651:1;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23337832	23340539	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=intron:NA12877_ch_T0001651:1;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23340540	23340717	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=exon:NA12877_ch_T0001651:2;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23340718	23342652	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=intron:NA12877_ch_T0001651:2;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23342653	23342805	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=exon:NA12877_ch_T0001651:3;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23342806	23344812	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=intron:NA12877_ch_T0001651:3;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23344813	23344927	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=exon:NA12877_ch_T0001651:4;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23344928	23345796	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=intron:NA12877_ch_T0001651:4;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23345797	23345907	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=exon:NA12877_ch_T0001651:5;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23345908	23345989	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=intron:NA12877_ch_T0001651:5;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23345990	23346077	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=exon:NA12877_ch_T0001651:6;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23346078	23346501	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=intron:NA12877_ch_T0001651:6;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23346502	23346799	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=NA12877_ch_T0001651;gene_id=NA12877_ch_G0000563;Parent=NA12877_ch_T0001651;transcript_name=NA12877_ch_T0001651;gene_name=RBMY2BP;ID=exon:NA12877_ch_T0001651:7;Name=RBMY2BP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23358544	23360787	.	-	.	source_gene_common_name=ENSG00000224917;source_gene=ENSG00000224917.1;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;gene_id=NA12877_ch_G0000564;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000224917;gene_sources=liftoff;ID=NA12877_ch_G0000564;Name=ENSG00000224917
NA12877_chrY	CAT	transcript	23358544	23360787	1000	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=NA12877_ch_T0001652;gene_id=NA12877_ch_G0000564;Parent=NA12877_ch_G0000564;transcript_name=NA12877_ch_T0001652;gene_name=ENSG00000224917;ID=NA12877_ch_T0001652;Name=ENSG00000224917
NA12877_chrY	CAT	exon	23358544	23358617	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=NA12877_ch_T0001652;gene_id=NA12877_ch_G0000564;Parent=NA12877_ch_T0001652;transcript_name=NA12877_ch_T0001652;gene_name=ENSG00000224917;ID=exon:NA12877_ch_T0001652:0;Name=ENSG00000224917;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23358618	23358738	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=NA12877_ch_T0001652;gene_id=NA12877_ch_G0000564;Parent=NA12877_ch_T0001652;transcript_name=NA12877_ch_T0001652;gene_name=ENSG00000224917;ID=intron:NA12877_ch_T0001652:0;Name=ENSG00000224917;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23358739	23358798	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=NA12877_ch_T0001652;gene_id=NA12877_ch_G0000564;Parent=NA12877_ch_T0001652;transcript_name=NA12877_ch_T0001652;gene_name=ENSG00000224917;ID=exon:NA12877_ch_T0001652:1;Name=ENSG00000224917;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23358799	23358974	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=NA12877_ch_T0001652;gene_id=NA12877_ch_G0000564;Parent=NA12877_ch_T0001652;transcript_name=NA12877_ch_T0001652;gene_name=ENSG00000224917;ID=intron:NA12877_ch_T0001652:1;Name=ENSG00000224917;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23358975	23359083	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=NA12877_ch_T0001652;gene_id=NA12877_ch_G0000564;Parent=NA12877_ch_T0001652;transcript_name=NA12877_ch_T0001652;gene_name=ENSG00000224917;ID=exon:NA12877_ch_T0001652:2;Name=ENSG00000224917;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23359084	23359298	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=NA12877_ch_T0001652;gene_id=NA12877_ch_G0000564;Parent=NA12877_ch_T0001652;transcript_name=NA12877_ch_T0001652;gene_name=ENSG00000224917;ID=intron:NA12877_ch_T0001652:2;Name=ENSG00000224917;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23359299	23359353	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=NA12877_ch_T0001652;gene_id=NA12877_ch_G0000564;Parent=NA12877_ch_T0001652;transcript_name=NA12877_ch_T0001652;gene_name=ENSG00000224917;ID=exon:NA12877_ch_T0001652:3;Name=ENSG00000224917;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23359354	23360385	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=NA12877_ch_T0001652;gene_id=NA12877_ch_G0000564;Parent=NA12877_ch_T0001652;transcript_name=NA12877_ch_T0001652;gene_name=ENSG00000224917;ID=intron:NA12877_ch_T0001652:3;Name=ENSG00000224917;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23360386	23360787	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=NA12877_ch_T0001652;gene_id=NA12877_ch_G0000564;Parent=NA12877_ch_T0001652;transcript_name=NA12877_ch_T0001652;gene_name=ENSG00000224917;ID=exon:NA12877_ch_T0001652:4;Name=ENSG00000224917;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23381871	23460065	.	-	.	source_gene_common_name=ENSG00000306918;source_gene=ENSG00000306918.1;gene_id=NA12877_ch_G0000565;gene_biotype=lncRNA;gene_name=ENSG00000306918;gene_sources=liftoff;ID=NA12877_ch_G0000565;Name=ENSG00000306918
NA12877_chrY	CAT	transcript	23381871	23460049	1000	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001653;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_G0000565;transcript_name=NA12877_ch_T0001653;gene_name=ENSG00000306918;ID=NA12877_ch_T0001653;Name=ENSG00000306918
NA12877_chrY	CAT	exon	23381871	23382153	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001653;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001653;transcript_name=NA12877_ch_T0001653;gene_name=ENSG00000306918;ID=exon:NA12877_ch_T0001653:0;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23382154	23383775	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001653;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001653;transcript_name=NA12877_ch_T0001653;gene_name=ENSG00000306918;ID=intron:NA12877_ch_T0001653:0;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23383776	23383819	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001653;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001653;transcript_name=NA12877_ch_T0001653;gene_name=ENSG00000306918;ID=exon:NA12877_ch_T0001653:1;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23383820	23448231	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001653;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001653;transcript_name=NA12877_ch_T0001653;gene_name=ENSG00000306918;ID=intron:NA12877_ch_T0001653:1;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23448232	23448339	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001653;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001653;transcript_name=NA12877_ch_T0001653;gene_name=ENSG00000306918;ID=exon:NA12877_ch_T0001653:2;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23448340	23451487	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001653;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001653;transcript_name=NA12877_ch_T0001653;gene_name=ENSG00000306918;ID=intron:NA12877_ch_T0001653:2;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23451488	23451576	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001653;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001653;transcript_name=NA12877_ch_T0001653;gene_name=ENSG00000306918;ID=exon:NA12877_ch_T0001653:3;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23451577	23459950	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001653;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001653;transcript_name=NA12877_ch_T0001653;gene_name=ENSG00000306918;ID=intron:NA12877_ch_T0001653:3;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23459951	23460049	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001653;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001653;transcript_name=NA12877_ch_T0001653;gene_name=ENSG00000306918;ID=exon:NA12877_ch_T0001653:4;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23417045	23460065	1000	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001654;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_G0000565;transcript_name=NA12877_ch_T0001654;gene_name=ENSG00000306918;ID=NA12877_ch_T0001654;Name=ENSG00000306918
NA12877_chrY	CAT	exon	23417045	23417441	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001654;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001654;transcript_name=NA12877_ch_T0001654;gene_name=ENSG00000306918;ID=exon:NA12877_ch_T0001654:0;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23417442	23448231	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001654;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001654;transcript_name=NA12877_ch_T0001654;gene_name=ENSG00000306918;ID=intron:NA12877_ch_T0001654:0;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23448232	23448339	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001654;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001654;transcript_name=NA12877_ch_T0001654;gene_name=ENSG00000306918;ID=exon:NA12877_ch_T0001654:1;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23448340	23459950	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001654;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001654;transcript_name=NA12877_ch_T0001654;gene_name=ENSG00000306918;ID=intron:NA12877_ch_T0001654:1;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23459951	23460065	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001654;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001654;transcript_name=NA12877_ch_T0001654;gene_name=ENSG00000306918;ID=exon:NA12877_ch_T0001654:2;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23417045	23460047	1000	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001655;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_G0000565;transcript_name=NA12877_ch_T0001655;gene_name=ENSG00000306918;ID=NA12877_ch_T0001655;Name=ENSG00000306918
NA12877_chrY	CAT	exon	23417045	23417441	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001655;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001655;transcript_name=NA12877_ch_T0001655;gene_name=ENSG00000306918;ID=exon:NA12877_ch_T0001655:0;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23417442	23448231	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001655;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001655;transcript_name=NA12877_ch_T0001655;gene_name=ENSG00000306918;ID=intron:NA12877_ch_T0001655:0;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23448232	23448339	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001655;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001655;transcript_name=NA12877_ch_T0001655;gene_name=ENSG00000306918;ID=exon:NA12877_ch_T0001655:1;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23448340	23451487	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001655;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001655;transcript_name=NA12877_ch_T0001655;gene_name=ENSG00000306918;ID=intron:NA12877_ch_T0001655:1;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23451488	23451576	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001655;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001655;transcript_name=NA12877_ch_T0001655;gene_name=ENSG00000306918;ID=exon:NA12877_ch_T0001655:2;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23451577	23459950	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001655;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001655;transcript_name=NA12877_ch_T0001655;gene_name=ENSG00000306918;ID=intron:NA12877_ch_T0001655:2;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23459951	23460047	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=NA12877_ch_T0001655;gene_id=NA12877_ch_G0000565;Parent=NA12877_ch_T0001655;transcript_name=NA12877_ch_T0001655;gene_name=ENSG00000306918;ID=exon:NA12877_ch_T0001655:3;Name=ENSG00000306918;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23450773	23457709	.	-	.	source_gene_common_name=RBMY2WP;source_gene=ENSG00000230727.1;gene_id=NA12877_ch_G0000566;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2WP;gene_sources=liftoff;ID=NA12877_ch_G0000566;Name=RBMY2WP
NA12877_chrY	CAT	transcript	23450773	23457709	1000	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=NA12877_ch_T0001656;gene_id=NA12877_ch_G0000566;Parent=NA12877_ch_G0000566;transcript_name=NA12877_ch_T0001656;gene_name=RBMY2WP;ID=NA12877_ch_T0001656;Name=RBMY2WP
NA12877_chrY	CAT	exon	23450773	23451074	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=NA12877_ch_T0001656;gene_id=NA12877_ch_G0000566;Parent=NA12877_ch_T0001656;transcript_name=NA12877_ch_T0001656;gene_name=RBMY2WP;ID=exon:NA12877_ch_T0001656:0;Name=RBMY2WP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23451075	23451487	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=NA12877_ch_T0001656;gene_id=NA12877_ch_G0000566;Parent=NA12877_ch_T0001656;transcript_name=NA12877_ch_T0001656;gene_name=RBMY2WP;ID=intron:NA12877_ch_T0001656:0;Name=RBMY2WP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23451488	23451576	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=NA12877_ch_T0001656;gene_id=NA12877_ch_G0000566;Parent=NA12877_ch_T0001656;transcript_name=NA12877_ch_T0001656;gene_name=RBMY2WP;ID=exon:NA12877_ch_T0001656:1;Name=RBMY2WP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23451577	23451657	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=NA12877_ch_T0001656;gene_id=NA12877_ch_G0000566;Parent=NA12877_ch_T0001656;transcript_name=NA12877_ch_T0001656;gene_name=RBMY2WP;ID=intron:NA12877_ch_T0001656:1;Name=RBMY2WP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23451658	23451768	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=NA12877_ch_T0001656;gene_id=NA12877_ch_G0000566;Parent=NA12877_ch_T0001656;transcript_name=NA12877_ch_T0001656;gene_name=RBMY2WP;ID=exon:NA12877_ch_T0001656:2;Name=RBMY2WP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23451769	23454519	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=NA12877_ch_T0001656;gene_id=NA12877_ch_G0000566;Parent=NA12877_ch_T0001656;transcript_name=NA12877_ch_T0001656;gene_name=RBMY2WP;ID=intron:NA12877_ch_T0001656:2;Name=RBMY2WP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23454520	23454696	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=NA12877_ch_T0001656;gene_id=NA12877_ch_G0000566;Parent=NA12877_ch_T0001656;transcript_name=NA12877_ch_T0001656;gene_name=RBMY2WP;ID=exon:NA12877_ch_T0001656:3;Name=RBMY2WP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23454697	23457084	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=NA12877_ch_T0001656;gene_id=NA12877_ch_G0000566;Parent=NA12877_ch_T0001656;transcript_name=NA12877_ch_T0001656;gene_name=RBMY2WP;ID=intron:NA12877_ch_T0001656:3;Name=RBMY2WP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23457085	23457186	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=NA12877_ch_T0001656;gene_id=NA12877_ch_G0000566;Parent=NA12877_ch_T0001656;transcript_name=NA12877_ch_T0001656;gene_name=RBMY2WP;ID=exon:NA12877_ch_T0001656:4;Name=RBMY2WP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23457187	23457596	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=NA12877_ch_T0001656;gene_id=NA12877_ch_G0000566;Parent=NA12877_ch_T0001656;transcript_name=NA12877_ch_T0001656;gene_name=RBMY2WP;ID=intron:NA12877_ch_T0001656:4;Name=RBMY2WP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23457597	23457709	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=NA12877_ch_T0001656;gene_id=NA12877_ch_G0000566;Parent=NA12877_ch_T0001656;transcript_name=NA12877_ch_T0001656;gene_name=RBMY2WP;ID=exon:NA12877_ch_T0001656:5;Name=RBMY2WP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23505026	23510116	.	-	.	source_gene_common_name=ENSG00000308317;source_gene=ENSG00000308317.1;gene_id=NA12877_ch_G0000567;gene_biotype=lncRNA;gene_name=ENSG00000308317;gene_sources=liftoff;ID=NA12877_ch_G0000567;Name=ENSG00000308317
NA12877_chrY	CAT	transcript	23505026	23510116	1000	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=NA12877_ch_T0001657;gene_id=NA12877_ch_G0000567;Parent=NA12877_ch_G0000567;transcript_name=NA12877_ch_T0001657;gene_name=ENSG00000308317;ID=NA12877_ch_T0001657;Name=ENSG00000308317
NA12877_chrY	CAT	exon	23505026	23505367	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=NA12877_ch_T0001657;gene_id=NA12877_ch_G0000567;Parent=NA12877_ch_T0001657;transcript_name=NA12877_ch_T0001657;gene_name=ENSG00000308317;ID=exon:NA12877_ch_T0001657:0;Name=ENSG00000308317;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23505368	23510019	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=NA12877_ch_T0001657;gene_id=NA12877_ch_G0000567;Parent=NA12877_ch_T0001657;transcript_name=NA12877_ch_T0001657;gene_name=ENSG00000308317;ID=intron:NA12877_ch_T0001657:0;Name=ENSG00000308317;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23510020	23510116	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=NA12877_ch_T0001657;gene_id=NA12877_ch_G0000567;Parent=NA12877_ch_T0001657;transcript_name=NA12877_ch_T0001657;gene_name=ENSG00000308317;ID=exon:NA12877_ch_T0001657:1;Name=ENSG00000308317;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23539507	23540638	.	+	.	source_gene_common_name=TTTY17A;source_gene=ENSG00000228240.1;alternative_source_transcripts=ENST00000416110.1,ENST00000416110.1;gene_id=NA12877_ch_G0000568;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=NA12877_ch_G0000568;Name=TTTY17A
NA12877_chrY	CAT	transcript	23539507	23540638	1000	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=ENST00000416110.1,ENST00000416110.1;transcript_id=NA12877_ch_T0001658;gene_id=NA12877_ch_G0000568;Parent=NA12877_ch_G0000568;transcript_name=NA12877_ch_T0001658;gene_name=TTTY17A;ID=NA12877_ch_T0001658;Name=TTTY17A
NA12877_chrY	CAT	exon	23539507	23539566	.	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=ENST00000416110.1,ENST00000416110.1;transcript_id=NA12877_ch_T0001658;gene_id=NA12877_ch_G0000568;Parent=NA12877_ch_T0001658;transcript_name=NA12877_ch_T0001658;gene_name=TTTY17A;ID=exon:NA12877_ch_T0001658:0;Name=TTTY17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23539567	23540532	.	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=ENST00000416110.1,ENST00000416110.1;transcript_id=NA12877_ch_T0001658;gene_id=NA12877_ch_G0000568;Parent=NA12877_ch_T0001658;transcript_name=NA12877_ch_T0001658;gene_name=TTTY17A;ID=intron:NA12877_ch_T0001658:0;Name=TTTY17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23540533	23540638	.	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=ENST00000416110.1,ENST00000416110.1;transcript_id=NA12877_ch_T0001658;gene_id=NA12877_ch_G0000568;Parent=NA12877_ch_T0001658;transcript_name=NA12877_ch_T0001658;gene_name=TTTY17A;ID=exon:NA12877_ch_T0001658:1;Name=TTTY17A;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23549035	23549757	.	-	.	source_gene_common_name=ENSG00000276829;source_gene=ENSG00000276829.1;alternative_source_transcripts=ENST00000613297.1,ENST00000613297.1;gene_id=NA12877_ch_G0000569;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000276829;gene_sources=liftoff;ID=NA12877_ch_G0000569;Name=ENSG00000276829
NA12877_chrY	CAT	transcript	23549035	23549757	1000	-	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1,ENST00000613297.1;transcript_id=NA12877_ch_T0001659;gene_id=NA12877_ch_G0000569;Parent=NA12877_ch_G0000569;transcript_name=NA12877_ch_T0001659;gene_name=ENSG00000276829;ID=NA12877_ch_T0001659;Name=ENSG00000276829
NA12877_chrY	CAT	exon	23549035	23549195	.	-	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1,ENST00000613297.1;transcript_id=NA12877_ch_T0001659;gene_id=NA12877_ch_G0000569;Parent=NA12877_ch_T0001659;transcript_name=NA12877_ch_T0001659;gene_name=ENSG00000276829;ID=exon:NA12877_ch_T0001659:0;Name=ENSG00000276829;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23549196	23549466	.	-	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1,ENST00000613297.1;transcript_id=NA12877_ch_T0001659;gene_id=NA12877_ch_G0000569;Parent=NA12877_ch_T0001659;transcript_name=NA12877_ch_T0001659;gene_name=ENSG00000276829;ID=intron:NA12877_ch_T0001659:0;Name=ENSG00000276829;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23549467	23549757	.	-	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1,ENST00000613297.1;transcript_id=NA12877_ch_T0001659;gene_id=NA12877_ch_G0000569;Parent=NA12877_ch_T0001659;transcript_name=NA12877_ch_T0001659;gene_name=ENSG00000276829;ID=exon:NA12877_ch_T0001659:1;Name=ENSG00000276829;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23554467	23555679	.	-	.	source_gene_common_name=ZNF736P11Y;source_gene=ENSG00000215537.3;alternative_source_transcripts=ENST00000442535.1,ENST00000442535.1;gene_id=NA12877_ch_G0000570;gene_biotype=processed_pseudogene;gene_name=ZNF736P11Y;gene_sources=liftoff;ID=NA12877_ch_G0000570;Name=ZNF736P11Y
NA12877_chrY	CAT	transcript	23554467	23555679	1000	-	.	source_transcript=ENST00000442535.1;source_transcript_name=ZNF736P11Y-201;source_gene=ENSG00000215537.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215537.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442535.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442535.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P11Y;alternative_source_transcripts=ENST00000442535.1,ENST00000442535.1;transcript_id=NA12877_ch_T0001660;gene_id=NA12877_ch_G0000570;Parent=NA12877_ch_G0000570;transcript_name=NA12877_ch_T0001660;gene_name=ZNF736P11Y;ID=NA12877_ch_T0001660;Name=ZNF736P11Y
NA12877_chrY	CAT	exon	23554467	23555679	.	-	.	source_transcript=ENST00000442535.1;source_transcript_name=ZNF736P11Y-201;source_gene=ENSG00000215537.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215537.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442535.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442535.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P11Y;alternative_source_transcripts=ENST00000442535.1,ENST00000442535.1;transcript_id=NA12877_ch_T0001660;gene_id=NA12877_ch_G0000570;Parent=NA12877_ch_T0001660;transcript_name=NA12877_ch_T0001660;gene_name=ZNF736P11Y;ID=exon:NA12877_ch_T0001660:0;Name=ZNF736P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23624378	23661211	.	+	.	source_gene_common_name=TTTY4;source_gene=ENSG00000226906.1;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;gene_id=NA12877_ch_G0000571;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=NA12877_ch_G0000571;Name=TTTY4
NA12877_chrY	CAT	transcript	23624378	23661211	1000	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=NA12877_ch_T0001661;gene_id=NA12877_ch_G0000571;Parent=NA12877_ch_G0000571;transcript_name=NA12877_ch_T0001661;gene_name=TTTY4;ID=NA12877_ch_T0001661;Name=TTTY4
NA12877_chrY	CAT	exon	23624378	23624538	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=NA12877_ch_T0001661;gene_id=NA12877_ch_G0000571;Parent=NA12877_ch_T0001661;transcript_name=NA12877_ch_T0001661;gene_name=TTTY4;ID=exon:NA12877_ch_T0001661:0;Name=TTTY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23624539	23651554	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=NA12877_ch_T0001661;gene_id=NA12877_ch_G0000571;Parent=NA12877_ch_T0001661;transcript_name=NA12877_ch_T0001661;gene_name=TTTY4;ID=intron:NA12877_ch_T0001661:0;Name=TTTY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23651555	23651630	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=NA12877_ch_T0001661;gene_id=NA12877_ch_G0000571;Parent=NA12877_ch_T0001661;transcript_name=NA12877_ch_T0001661;gene_name=TTTY4;ID=exon:NA12877_ch_T0001661:1;Name=TTTY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23651631	23653434	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=NA12877_ch_T0001661;gene_id=NA12877_ch_G0000571;Parent=NA12877_ch_T0001661;transcript_name=NA12877_ch_T0001661;gene_name=TTTY4;ID=intron:NA12877_ch_T0001661:1;Name=TTTY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23653435	23653542	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=NA12877_ch_T0001661;gene_id=NA12877_ch_G0000571;Parent=NA12877_ch_T0001661;transcript_name=NA12877_ch_T0001661;gene_name=TTTY4;ID=exon:NA12877_ch_T0001661:2;Name=TTTY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23653543	23660210	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=NA12877_ch_T0001661;gene_id=NA12877_ch_G0000571;Parent=NA12877_ch_T0001661;transcript_name=NA12877_ch_T0001661;gene_name=TTTY4;ID=intron:NA12877_ch_T0001661:2;Name=TTTY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23660211	23661211	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=NA12877_ch_T0001661;gene_id=NA12877_ch_G0000571;Parent=NA12877_ch_T0001661;transcript_name=NA12877_ch_T0001661;gene_name=TTTY4;ID=exon:NA12877_ch_T0001661:3;Name=TTTY4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23661746	23693393	.	+	.	source_gene_common_name=BPY2B;source_gene=ENSG00000183795.8;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;gene_id=NA12877_ch_G0000572;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=NA12877_ch_G0000572;Name=BPY2B
NA12877_chrY	CAT	transcript	23661746	23680303	100	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=NA12877_ch_T0001662;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_G0000572;transcript_name=NA12877_ch_T0001662;gene_name=BPY2B;ID=NA12877_ch_T0001662;Name=BPY2B
NA12877_chrY	CAT	exon	23661746	23661901	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=NA12877_ch_T0001662;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001662;transcript_name=NA12877_ch_T0001662;gene_name=BPY2B;ID=exon:NA12877_ch_T0001662:0;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23661902	23672074	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=NA12877_ch_T0001662;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001662;transcript_name=NA12877_ch_T0001662;gene_name=BPY2B;ID=intron:NA12877_ch_T0001662:0;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23672075	23672143	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=NA12877_ch_T0001662;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001662;transcript_name=NA12877_ch_T0001662;gene_name=BPY2B;ID=exon:NA12877_ch_T0001662:1;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23672144	23672495	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=NA12877_ch_T0001662;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001662;transcript_name=NA12877_ch_T0001662;gene_name=BPY2B;ID=intron:NA12877_ch_T0001662:1;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23672496	23672618	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=NA12877_ch_T0001662;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001662;transcript_name=NA12877_ch_T0001662;gene_name=BPY2B;ID=exon:NA12877_ch_T0001662:2;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23672619	23675683	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=NA12877_ch_T0001662;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001662;transcript_name=NA12877_ch_T0001662;gene_name=BPY2B;ID=intron:NA12877_ch_T0001662:2;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23675684	23675820	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=NA12877_ch_T0001662;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001662;transcript_name=NA12877_ch_T0001662;gene_name=BPY2B;ID=exon:NA12877_ch_T0001662:3;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23675821	23680229	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=NA12877_ch_T0001662;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001662;transcript_name=NA12877_ch_T0001662;gene_name=BPY2B;ID=intron:NA12877_ch_T0001662:3;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23680230	23680303	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=NA12877_ch_T0001662;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001662;transcript_name=NA12877_ch_T0001662;gene_name=BPY2B;ID=exon:NA12877_ch_T0001662:4;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23680271	23680303	.	+	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=NA12877_ch_T0001662;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001662;transcript_name=NA12877_ch_T0001662;gene_name=BPY2B;ID=CDS:NA12877_ch_T0001662:0;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	23680271	23680273	.	+	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=NA12877_ch_T0001662;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001662;transcript_name=NA12877_ch_T0001662;gene_name=BPY2B;ID=start_codon:NA12877_ch_T0001662;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23672190	23693393	100	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_G0000572;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=NA12877_ch_T0001663;Name=BPY2B
NA12877_chrY	CAT	exon	23672190	23672220	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=exon:NA12877_ch_T0001663:0;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23672221	23672495	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=intron:NA12877_ch_T0001663:0;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23672496	23672618	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=exon:NA12877_ch_T0001663:1;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23672619	23675683	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=intron:NA12877_ch_T0001663:1;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23675684	23675820	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=exon:NA12877_ch_T0001663:2;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23675821	23680229	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=intron:NA12877_ch_T0001663:2;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23680230	23680348	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=exon:NA12877_ch_T0001663:3;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23680271	23680348	.	+	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=CDS:NA12877_ch_T0001663:0;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	23680271	23680273	.	+	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=start_codon:NA12877_ch_T0001663;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23680349	23682407	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=intron:NA12877_ch_T0001663:3;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23682408	23682525	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=exon:NA12877_ch_T0001663:4;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23682408	23682525	.	+	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=CDS:NA12877_ch_T0001663:1;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23682526	23685379	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=intron:NA12877_ch_T0001663:4;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23685380	23685485	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=exon:NA12877_ch_T0001663:5;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23685380	23685485	.	+	2	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=CDS:NA12877_ch_T0001663:2;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23685486	23686177	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=intron:NA12877_ch_T0001663:5;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23686178	23686302	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=exon:NA12877_ch_T0001663:6;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23686178	23686196	.	+	1	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=CDS:NA12877_ch_T0001663:3;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	23686194	23686196	.	+	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=stop_codon:NA12877_ch_T0001663;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23686303	23692852	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=intron:NA12877_ch_T0001663:6;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23692853	23692977	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=exon:NA12877_ch_T0001663:7;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23692978	23693071	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=intron:NA12877_ch_T0001663:7;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23693072	23693393	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=NA12877_ch_T0001663;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001663;transcript_name=NA12877_ch_T0001663;gene_name=BPY2B;ID=exon:NA12877_ch_T0001663:8;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23672214	23693334	1000	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_G0000572;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=NA12877_ch_T0001664;Name=BPY2B
NA12877_chrY	CAT	exon	23672214	23672220	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=exon:NA12877_ch_T0001664:0;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23672221	23672495	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=intron:NA12877_ch_T0001664:0;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23672496	23672618	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=exon:NA12877_ch_T0001664:1;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23672619	23675683	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=intron:NA12877_ch_T0001664:1;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23675684	23675820	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=exon:NA12877_ch_T0001664:2;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23675821	23680229	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=intron:NA12877_ch_T0001664:2;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23680230	23680348	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=exon:NA12877_ch_T0001664:3;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23680349	23685379	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=intron:NA12877_ch_T0001664:3;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23685380	23685485	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=exon:NA12877_ch_T0001664:4;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23685486	23686177	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=intron:NA12877_ch_T0001664:4;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23686178	23686302	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=exon:NA12877_ch_T0001664:5;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23686303	23692852	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=intron:NA12877_ch_T0001664:5;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23692853	23692982	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=exon:NA12877_ch_T0001664:6;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23692983	23693071	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=intron:NA12877_ch_T0001664:6;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23693072	23693334	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=NA12877_ch_T0001664;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001664;transcript_name=NA12877_ch_T0001664;gene_name=BPY2B;ID=exon:NA12877_ch_T0001664:7;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23680271	23686196	100	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_G0000572;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=NA12877_ch_T0001665;Name=BPY2B
NA12877_chrY	CAT	exon	23680271	23680348	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=exon:NA12877_ch_T0001665:0;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23680271	23680348	.	+	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=CDS:NA12877_ch_T0001665:0;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	23680271	23680273	.	+	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=start_codon:NA12877_ch_T0001665;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23680349	23682407	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=intron:NA12877_ch_T0001665:0;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23682408	23682525	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=exon:NA12877_ch_T0001665:1;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23682408	23682525	.	+	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=CDS:NA12877_ch_T0001665:1;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23682526	23685379	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=intron:NA12877_ch_T0001665:1;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23685380	23685485	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=exon:NA12877_ch_T0001665:2;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23685380	23685485	.	+	2	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=CDS:NA12877_ch_T0001665:2;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23685486	23686177	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=intron:NA12877_ch_T0001665:2;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23686178	23686196	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=exon:NA12877_ch_T0001665:3;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23686178	23686196	.	+	1	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=CDS:NA12877_ch_T0001665:3;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	23686194	23686196	.	+	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=NA12877_ch_T0001665;gene_id=NA12877_ch_G0000572;Parent=NA12877_ch_T0001665;transcript_name=NA12877_ch_T0001665;gene_name=BPY2B;ID=stop_codon:NA12877_ch_T0001665;Name=BPY2B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23704991	23705749	.	+	.	source_gene_common_name=ENSG00000244000;source_gene=ENSG00000244000.1;alternative_source_transcripts=ENST00000422002.1,ENST00000422002.1;gene_id=NA12877_ch_G0000573;gene_biotype=processed_pseudogene;gene_name=ENSG00000244000;gene_sources=liftoff;ID=NA12877_ch_G0000573;Name=ENSG00000244000
NA12877_chrY	CAT	transcript	23704991	23705749	1000	+	.	source_transcript=ENST00000422002.1;source_transcript_name=ENST00000422002;source_gene=ENSG00000244000.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244000.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422002.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000244000;alternative_source_transcripts=ENST00000422002.1,ENST00000422002.1;transcript_id=NA12877_ch_T0001666;gene_id=NA12877_ch_G0000573;Parent=NA12877_ch_G0000573;transcript_name=NA12877_ch_T0001666;gene_name=ENSG00000244000;ID=NA12877_ch_T0001666;Name=ENSG00000244000
NA12877_chrY	CAT	exon	23704991	23705749	.	+	.	source_transcript=ENST00000422002.1;source_transcript_name=ENST00000422002;source_gene=ENSG00000244000.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244000.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422002.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000244000;alternative_source_transcripts=ENST00000422002.1,ENST00000422002.1;transcript_id=NA12877_ch_T0001666;gene_id=NA12877_ch_G0000573;Parent=NA12877_ch_T0001666;transcript_name=NA12877_ch_T0001666;gene_name=ENSG00000244000;ID=exon:NA12877_ch_T0001666:0;Name=ENSG00000244000;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23713522	23714591	.	+	.	source_gene_common_name=TRIM60P8Y;source_gene=ENSG00000232764.1;alternative_source_transcripts=ENST00000436338.1,ENST00000436338.1;gene_id=NA12877_ch_G0000574;gene_biotype=processed_pseudogene;gene_name=TRIM60P8Y;gene_sources=liftoff;ID=NA12877_ch_G0000574;Name=TRIM60P8Y
NA12877_chrY	CAT	transcript	23713522	23714591	1000	+	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;alternative_source_transcripts=ENST00000436338.1,ENST00000436338.1;transcript_id=NA12877_ch_T0001667;gene_id=NA12877_ch_G0000574;Parent=NA12877_ch_G0000574;transcript_name=NA12877_ch_T0001667;gene_name=TRIM60P8Y;ID=NA12877_ch_T0001667;Name=TRIM60P8Y
NA12877_chrY	CAT	exon	23713522	23713772	.	+	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;alternative_source_transcripts=ENST00000436338.1,ENST00000436338.1;transcript_id=NA12877_ch_T0001667;gene_id=NA12877_ch_G0000574;Parent=NA12877_ch_T0001667;transcript_name=NA12877_ch_T0001667;gene_name=TRIM60P8Y;ID=exon:NA12877_ch_T0001667:0;Name=TRIM60P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23713773	23714080	.	+	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;alternative_source_transcripts=ENST00000436338.1,ENST00000436338.1;transcript_id=NA12877_ch_T0001667;gene_id=NA12877_ch_G0000574;Parent=NA12877_ch_T0001667;transcript_name=NA12877_ch_T0001667;gene_name=TRIM60P8Y;ID=intron:NA12877_ch_T0001667:0;Name=TRIM60P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23714081	23714591	.	+	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;alternative_source_transcripts=ENST00000436338.1,ENST00000436338.1;transcript_id=NA12877_ch_T0001667;gene_id=NA12877_ch_G0000574;Parent=NA12877_ch_T0001667;transcript_name=NA12877_ch_T0001667;gene_name=TRIM60P8Y;ID=exon:NA12877_ch_T0001667:1;Name=TRIM60P8Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23737175	23739123	.	+	.	source_gene_common_name=ZNF736P3Y;source_gene=ENSG00000233126.3;alternative_source_transcripts=ENST00000428264.1,ENST00000428264.1;gene_id=NA12877_ch_G0000575;gene_biotype=processed_pseudogene;gene_name=ZNF736P3Y;gene_sources=liftoff;ID=NA12877_ch_G0000575;Name=ZNF736P3Y
NA12877_chrY	CAT	transcript	23737175	23739123	1000	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;alternative_source_transcripts=ENST00000428264.1,ENST00000428264.1;transcript_id=NA12877_ch_T0001668;gene_id=NA12877_ch_G0000575;Parent=NA12877_ch_G0000575;transcript_name=NA12877_ch_T0001668;gene_name=ZNF736P3Y;ID=NA12877_ch_T0001668;Name=ZNF736P3Y
NA12877_chrY	CAT	exon	23737175	23737288	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;alternative_source_transcripts=ENST00000428264.1,ENST00000428264.1;transcript_id=NA12877_ch_T0001668;gene_id=NA12877_ch_G0000575;Parent=NA12877_ch_T0001668;transcript_name=NA12877_ch_T0001668;gene_name=ZNF736P3Y;ID=exon:NA12877_ch_T0001668:0;Name=ZNF736P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23737289	23737607	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;alternative_source_transcripts=ENST00000428264.1,ENST00000428264.1;transcript_id=NA12877_ch_T0001668;gene_id=NA12877_ch_G0000575;Parent=NA12877_ch_T0001668;transcript_name=NA12877_ch_T0001668;gene_name=ZNF736P3Y;ID=intron:NA12877_ch_T0001668:0;Name=ZNF736P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23737608	23737664	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;alternative_source_transcripts=ENST00000428264.1,ENST00000428264.1;transcript_id=NA12877_ch_T0001668;gene_id=NA12877_ch_G0000575;Parent=NA12877_ch_T0001668;transcript_name=NA12877_ch_T0001668;gene_name=ZNF736P3Y;ID=exon:NA12877_ch_T0001668:1;Name=ZNF736P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23737665	23737829	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;alternative_source_transcripts=ENST00000428264.1,ENST00000428264.1;transcript_id=NA12877_ch_T0001668;gene_id=NA12877_ch_G0000575;Parent=NA12877_ch_T0001668;transcript_name=NA12877_ch_T0001668;gene_name=ZNF736P3Y;ID=intron:NA12877_ch_T0001668:1;Name=ZNF736P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23737830	23739123	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;alternative_source_transcripts=ENST00000428264.1,ENST00000428264.1;transcript_id=NA12877_ch_T0001668;gene_id=NA12877_ch_G0000575;Parent=NA12877_ch_T0001668;transcript_name=NA12877_ch_T0001668;gene_name=ZNF736P3Y;ID=exon:NA12877_ch_T0001668:2;Name=ZNF736P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23745946	23747102	.	+	.	source_gene_common_name=TRIM60P9Y;source_gene=ENSG00000227251.1;alternative_source_transcripts=ENST00000438459.1,ENST00000438459.1;gene_id=NA12877_ch_G0000576;gene_biotype=processed_pseudogene;gene_name=TRIM60P9Y;gene_sources=liftoff;ID=NA12877_ch_G0000576;Name=TRIM60P9Y
NA12877_chrY	CAT	transcript	23745946	23747102	1000	+	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;alternative_source_transcripts=ENST00000438459.1,ENST00000438459.1;transcript_id=NA12877_ch_T0001669;gene_id=NA12877_ch_G0000576;Parent=NA12877_ch_G0000576;transcript_name=NA12877_ch_T0001669;gene_name=TRIM60P9Y;ID=NA12877_ch_T0001669;Name=TRIM60P9Y
NA12877_chrY	CAT	exon	23745946	23746245	.	+	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;alternative_source_transcripts=ENST00000438459.1,ENST00000438459.1;transcript_id=NA12877_ch_T0001669;gene_id=NA12877_ch_G0000576;Parent=NA12877_ch_T0001669;transcript_name=NA12877_ch_T0001669;gene_name=TRIM60P9Y;ID=exon:NA12877_ch_T0001669:0;Name=TRIM60P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23746246	23746586	.	+	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;alternative_source_transcripts=ENST00000438459.1,ENST00000438459.1;transcript_id=NA12877_ch_T0001669;gene_id=NA12877_ch_G0000576;Parent=NA12877_ch_T0001669;transcript_name=NA12877_ch_T0001669;gene_name=TRIM60P9Y;ID=intron:NA12877_ch_T0001669:0;Name=TRIM60P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23746587	23747102	.	+	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;alternative_source_transcripts=ENST00000438459.1,ENST00000438459.1;transcript_id=NA12877_ch_T0001669;gene_id=NA12877_ch_G0000576;Parent=NA12877_ch_T0001669;transcript_name=NA12877_ch_T0001669;gene_name=TRIM60P9Y;ID=exon:NA12877_ch_T0001669:1;Name=TRIM60P9Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23817276	23886932	.	-	.	source_gene_common_name=DAZ1;source_gene=ENSG00000188120.16;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;gene_id=NA12877_ch_G0000577;gene_biotype=protein_coding;gene_name=DAZ1;gene_sources=liftoff;ID=NA12877_ch_G0000577;Name=DAZ1
NA12877_chrY	CAT	transcript	23817276	23886930	100	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_G0000577;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=NA12877_ch_T0001670;Name=DAZ1
NA12877_chrY	CAT	exon	23817276	23819132	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:0;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23819133	23823095	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:0;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23823096	23823194	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:1;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23823131	23823194	.	-	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:0;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	23823131	23823133	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=stop_codon:NA12877_ch_T0001670;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23823195	23827767	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:1;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23827768	23827802	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:2;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23827768	23827802	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:1;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23827803	23828546	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:2;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23828547	23828618	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:3;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23828547	23828618	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:2;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23828619	23830931	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:3;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23830932	23831003	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:4;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23830932	23831003	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:3;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23831004	23840717	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:4;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23840718	23840789	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:5;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23840718	23840789	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:4;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23840790	23843094	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:5;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23843095	23843166	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:6;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23843095	23843166	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:5;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23843167	23845490	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:6;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23845491	23845562	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:7;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23845491	23845562	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:6;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23845563	23847873	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:7;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23847874	23847945	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:8;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23847874	23847945	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:7;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23847946	23850269	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:8;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23850270	23850341	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:9;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23850270	23850341	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:8;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23850342	23852660	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:9;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23852661	23852732	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:10;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23852661	23852732	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:9;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23852733	23855105	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:10;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23855106	23855177	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:11;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23855106	23855177	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:10;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23855178	23856577	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:11;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23856578	23856717	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:12;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23856578	23856717	.	-	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:11;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23856718	23856806	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:12;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23856807	23856870	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:13;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23856807	23856870	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:12;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23856871	23857306	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:13;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23857307	23857358	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:14;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23857307	23857358	.	-	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:13;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23857359	23857918	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:14;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23857919	23858010	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:15;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23857919	23858010	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:14;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23858011	23858284	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:15;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23858285	23858431	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:16;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23858285	23858431	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:15;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23858432	23867418	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:16;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23867419	23867558	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:17;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23867419	23867558	.	-	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:16;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23867559	23867647	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:17;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23867648	23867711	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:18;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23867648	23867711	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:17;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23867712	23868147	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:18;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23868148	23868199	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:19;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23868148	23868199	.	-	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:18;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23868200	23868759	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:19;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23868760	23868851	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:20;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23868760	23868851	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:19;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23868852	23869125	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:20;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23869126	23869272	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:21;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23869126	23869272	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:20;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23869273	23878266	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:21;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23878267	23878406	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:22;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23878267	23878406	.	-	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:21;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23878407	23878495	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:22;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23878496	23878559	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:23;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23878496	23878559	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:22;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23878560	23878995	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:23;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23878996	23879047	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:24;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23878996	23879047	.	-	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:23;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23879048	23879607	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:24;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23879608	23879699	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:25;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23879608	23879699	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:24;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23879700	23879973	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:25;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23879974	23880120	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:26;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23879974	23880120	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:25;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23880121	23886719	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=intron:NA12877_ch_T0001670:26;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23886720	23886930	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=exon:NA12877_ch_T0001670:27;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23886720	23886722	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001670:26;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	23886720	23886722	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000405239.6,ENST00000405239.6;transcript_id=NA12877_ch_T0001670;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001670;transcript_name=NA12877_ch_T0001670;gene_name=DAZ1;ID=start_codon:NA12877_ch_T0001670;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23817283	23886932	100	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_G0000577;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=NA12877_ch_T0001671;Name=DAZ1
NA12877_chrY	CAT	exon	23817283	23819132	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:0;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23819133	23823095	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:0;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23823096	23823194	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:1;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23823131	23823194	.	-	1	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:0;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	23823131	23823133	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=stop_codon:NA12877_ch_T0001671;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23823195	23827767	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:1;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23827768	23827802	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:2;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23827768	23827802	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:1;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23827803	23828546	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:2;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23828547	23828618	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:3;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23828547	23828618	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:2;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23828619	23840717	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:3;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23840718	23840789	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:4;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23840718	23840789	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:3;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23840790	23843094	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:4;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23843095	23843166	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:5;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23843095	23843166	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:4;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23843167	23845490	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:5;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23845491	23845562	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:6;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23845491	23845562	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:5;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23845563	23847873	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:6;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23847874	23847945	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:7;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23847874	23847945	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:6;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23847946	23850269	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:7;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23850270	23850341	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:8;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23850270	23850341	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:7;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23850342	23852660	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:8;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23852661	23852732	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:9;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23852661	23852732	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:8;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23852733	23855105	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:9;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23855106	23855177	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:10;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23855106	23855177	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:9;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23855178	23878266	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:10;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23878267	23878406	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:11;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23878267	23878406	.	-	2	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:10;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23878407	23878495	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:11;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23878496	23878559	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:12;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23878496	23878559	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:11;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23878560	23878995	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:12;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23878996	23879047	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:13;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23878996	23879047	.	-	1	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:12;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23879048	23879607	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:13;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23879608	23879699	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:14;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23879608	23879699	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:13;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23879700	23879973	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:14;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23879974	23880120	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:15;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23879974	23880120	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:14;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23880121	23886719	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=intron:NA12877_ch_T0001671:15;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23886720	23886932	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=exon:NA12877_ch_T0001671:16;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23886720	23886722	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001671:15;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	23886720	23886722	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000540248.5,ENST00000540248.5;transcript_id=NA12877_ch_T0001671;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001671;transcript_name=NA12877_ch_T0001671;gene_name=DAZ1;ID=start_codon:NA12877_ch_T0001671;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23817284	23828733	1000	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000466332.1,ENST00000466332.1;transcript_id=NA12877_ch_T0001672;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_G0000577;transcript_name=NA12877_ch_T0001672;gene_name=DAZ1;ID=NA12877_ch_T0001672;Name=DAZ1
NA12877_chrY	CAT	exon	23817284	23819132	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000466332.1,ENST00000466332.1;transcript_id=NA12877_ch_T0001672;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001672;transcript_name=NA12877_ch_T0001672;gene_name=DAZ1;ID=exon:NA12877_ch_T0001672:0;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23819133	23823095	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000466332.1,ENST00000466332.1;transcript_id=NA12877_ch_T0001672;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001672;transcript_name=NA12877_ch_T0001672;gene_name=DAZ1;ID=intron:NA12877_ch_T0001672:0;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23823096	23823194	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000466332.1,ENST00000466332.1;transcript_id=NA12877_ch_T0001672;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001672;transcript_name=NA12877_ch_T0001672;gene_name=DAZ1;ID=exon:NA12877_ch_T0001672:1;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23823195	23826130	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000466332.1,ENST00000466332.1;transcript_id=NA12877_ch_T0001672;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001672;transcript_name=NA12877_ch_T0001672;gene_name=DAZ1;ID=intron:NA12877_ch_T0001672:1;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23826131	23826202	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000466332.1,ENST00000466332.1;transcript_id=NA12877_ch_T0001672;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001672;transcript_name=NA12877_ch_T0001672;gene_name=DAZ1;ID=exon:NA12877_ch_T0001672:2;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23826203	23827767	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000466332.1,ENST00000466332.1;transcript_id=NA12877_ch_T0001672;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001672;transcript_name=NA12877_ch_T0001672;gene_name=DAZ1;ID=intron:NA12877_ch_T0001672:2;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23827768	23827802	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000466332.1,ENST00000466332.1;transcript_id=NA12877_ch_T0001672;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001672;transcript_name=NA12877_ch_T0001672;gene_name=DAZ1;ID=exon:NA12877_ch_T0001672:3;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23827803	23828546	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000466332.1,ENST00000466332.1;transcript_id=NA12877_ch_T0001672;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001672;transcript_name=NA12877_ch_T0001672;gene_name=DAZ1;ID=intron:NA12877_ch_T0001672:3;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23828547	23828733	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000466332.1,ENST00000466332.1;transcript_id=NA12877_ch_T0001672;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001672;transcript_name=NA12877_ch_T0001672;gene_name=DAZ1;ID=exon:NA12877_ch_T0001672:4;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23818631	23886930	100	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_G0000577;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=NA12877_ch_T0001673;Name=DAZ1
NA12877_chrY	CAT	exon	23818631	23819132	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:0;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23819133	23823095	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:0;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23823096	23823194	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:1;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23823131	23823194	.	-	1	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:0;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	23823131	23823133	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=stop_codon:NA12877_ch_T0001673;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23823195	23827767	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:1;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23827768	23827802	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:2;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23827768	23827802	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:1;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23827803	23828546	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:2;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23828547	23828618	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:3;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23828547	23828618	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:2;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23828619	23830931	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:3;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23830932	23831003	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:4;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23830932	23831003	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:3;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23831004	23840717	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:4;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23840718	23840789	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:5;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23840718	23840789	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:4;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23840790	23845490	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:5;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23845491	23845562	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:6;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23845491	23845562	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:5;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23845563	23850269	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:6;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23850270	23850341	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:7;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23850270	23850341	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:6;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23850342	23852660	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:7;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23852661	23852732	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:8;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23852661	23852732	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:7;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23852733	23855105	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:8;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23855106	23855177	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:9;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23855106	23855177	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:8;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23855178	23878266	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:9;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23878267	23878406	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:10;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23878267	23878406	.	-	2	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:9;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23878407	23878495	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:10;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23878496	23878559	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:11;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23878496	23878559	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:10;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23878560	23878995	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:11;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23878996	23879047	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:12;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23878996	23879047	.	-	1	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:11;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23879048	23879607	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:12;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23879608	23879699	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:13;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23879608	23879699	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:12;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23879700	23879973	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:13;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23879974	23880120	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:14;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23879974	23880120	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:13;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23880121	23886719	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=intron:NA12877_ch_T0001673:14;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23886720	23886930	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=exon:NA12877_ch_T0001673:15;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23886720	23886722	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=CDS:NA12877_ch_T0001673:14;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	23886720	23886722	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;alternative_source_transcripts=ENST00000426000.6,ENST00000426000.6;transcript_id=NA12877_ch_T0001673;gene_id=NA12877_ch_G0000577;Parent=NA12877_ch_T0001673;transcript_name=NA12877_ch_T0001673;gene_name=DAZ1;ID=start_codon:NA12877_ch_T0001673;Name=DAZ1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	23907369	23979277	.	+	.	source_gene_common_name=DAZ2;source_gene=ENSG00000205944.12;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;gene_id=NA12877_ch_G0000578;gene_biotype=protein_coding;gene_name=DAZ2;gene_sources=liftoff;ID=NA12877_ch_G0000578;Name=DAZ2
NA12877_chrY	CAT	transcript	23907369	23979277	100	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_G0000578;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=NA12877_ch_T0001674;Name=DAZ2
NA12877_chrY	CAT	exon	23907369	23907665	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:0;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23907663	23907665	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:0;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	23907663	23907665	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=start_codon:NA12877_ch_T0001674;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23907666	23914265	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:0;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23914266	23914412	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:1;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23914266	23914412	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:1;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23914413	23914686	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:1;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23914687	23914778	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:2;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23914687	23914778	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:2;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23914779	23915338	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:2;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23915339	23915390	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:3;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23915339	23915390	.	+	1	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:3;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23915391	23915826	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:3;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23915827	23915890	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:4;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23915827	23915890	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:4;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23915891	23915979	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:4;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23915980	23916119	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:5;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23915980	23916119	.	+	2	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:5;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23916120	23917519	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:5;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23917520	23917591	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:6;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23917520	23917591	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:6;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23917592	23919963	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:6;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23919964	23920035	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:7;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23919964	23920035	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:7;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23920036	23922354	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:7;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23922355	23922426	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:8;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23922355	23922426	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:8;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23922427	23929528	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:8;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23929529	23929600	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:9;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23929529	23929600	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:9;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23929601	23934287	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:9;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23934288	23934359	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:10;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23934288	23934359	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:10;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23934360	23941461	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:10;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23941462	23941533	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:11;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23941462	23941533	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:11;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23941534	23943838	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:11;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23943839	23943910	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:12;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23943839	23943910	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:12;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23943911	23953627	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:12;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23953628	23953699	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:13;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23953628	23953699	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:13;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23953700	23956011	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:13;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23956012	23956083	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:14;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23956012	23956083	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:14;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23956084	23958395	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:14;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23958396	23958467	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:15;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23958396	23958467	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:15;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23958468	23960780	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:15;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23960781	23960852	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:16;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23960781	23960852	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:16;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23960853	23963164	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:16;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23963165	23963236	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:17;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23963165	23963236	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:17;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23963237	23965548	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:17;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23965549	23965620	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:18;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23965549	23965620	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:18;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23965621	23967933	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:18;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23967934	23968005	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:19;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23967934	23968005	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:19;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23968006	23968749	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:19;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23968750	23968784	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:20;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23968750	23968784	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:20;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23968785	23973358	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:20;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23973359	23973457	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:21;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23973359	23973422	.	+	1	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001674:21;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	23973420	23973422	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=stop_codon:NA12877_ch_T0001674;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23973458	23977420	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=intron:NA12877_ch_T0001674:21;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23977421	23979277	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382449.5,ENST00000382449.5;transcript_id=NA12877_ch_T0001674;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001674;transcript_name=NA12877_ch_T0001674;gene_name=DAZ2;ID=exon:NA12877_ch_T0001674:22;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23907455	23979277	100	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_G0000578;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=NA12877_ch_T0001675;Name=DAZ2
NA12877_chrY	CAT	exon	23907455	23907665	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:0;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23907663	23907665	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:0;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	23907663	23907665	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=start_codon:NA12877_ch_T0001675;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23907666	23914265	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:0;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23914266	23914412	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:1;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23914266	23914412	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:1;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23914413	23914686	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:1;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23914687	23914778	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:2;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23914687	23914778	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:2;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23914779	23915338	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:2;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23915339	23915390	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:3;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23915339	23915390	.	+	1	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:3;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23915391	23915826	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:3;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23915827	23915890	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:4;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23915827	23915890	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:4;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23915891	23915979	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:4;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23915980	23916119	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:5;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23915980	23916119	.	+	2	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:5;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23916120	23917519	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:5;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23917520	23917591	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:6;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23917520	23917591	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:6;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23917592	23919963	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:6;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23919964	23920035	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:7;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23919964	23920035	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:7;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23920036	23922354	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:7;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23922355	23922426	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:8;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23922355	23922426	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:8;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23922427	23924750	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:8;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23924751	23924822	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:9;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23924751	23924822	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:9;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23924823	23927132	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:9;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23927133	23927204	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:10;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23927133	23927204	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:10;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23927205	23929528	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:10;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23929529	23929600	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:11;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23929529	23929600	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:11;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23929601	23934287	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:11;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23934288	23934359	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:12;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23934288	23934359	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:12;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23934360	23936683	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:12;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23936684	23936755	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:13;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23936684	23936755	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:13;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23936756	23939065	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:13;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23939066	23939137	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:14;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23939066	23939137	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:14;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23939138	23941461	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:14;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23941462	23941533	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:15;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23941462	23941533	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:15;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23941534	23943838	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:15;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23943839	23943910	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:16;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23943839	23943910	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:16;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23943911	23953627	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:16;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23953628	23953699	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:17;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23953628	23953699	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:17;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23953700	23956011	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:17;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23956012	23956083	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:18;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23956012	23956083	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:18;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23956084	23958395	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:18;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23958396	23958467	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:19;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23958396	23958467	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:19;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23958468	23960780	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:19;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23960781	23960852	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:20;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23960781	23960852	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:20;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23960853	23963164	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:20;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23963165	23963236	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:21;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23963165	23963236	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:21;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23963237	23965548	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:21;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23965549	23965620	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:22;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23965549	23965620	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:22;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23965621	23967933	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:22;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23967934	23968005	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:23;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23967934	23968005	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:23;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23968006	23968749	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:23;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23968750	23968784	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:24;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23968750	23968784	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:24;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23968785	23973358	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:24;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23973359	23973457	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:25;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23973359	23973422	.	+	1	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001675:25;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	23973420	23973422	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=stop_codon:NA12877_ch_T0001675;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23973458	23977420	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=intron:NA12877_ch_T0001675:25;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23977421	23979277	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382440.6,ENST00000382440.6;transcript_id=NA12877_ch_T0001675;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001675;transcript_name=NA12877_ch_T0001675;gene_name=DAZ2;ID=exon:NA12877_ch_T0001675:26;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	23907470	23977920	100	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_G0000578;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=NA12877_ch_T0001676;Name=DAZ2
NA12877_chrY	CAT	exon	23907470	23907665	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:0;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23907663	23907665	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:0;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	23907663	23907665	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=start_codon:NA12877_ch_T0001676;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23907666	23914265	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:0;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23914266	23914412	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:1;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23914266	23914412	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:1;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23914413	23914686	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:1;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23914687	23914778	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:2;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23914687	23914778	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:2;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23914779	23915338	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:2;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23915339	23915390	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:3;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23915339	23915390	.	+	1	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:3;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23915391	23915826	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:3;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23915827	23915890	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:4;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23915827	23915890	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:4;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23915891	23915979	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:4;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23915980	23916119	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:5;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23915980	23916119	.	+	2	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:5;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23916120	23917519	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:5;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23917520	23917591	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:6;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23917520	23917591	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:6;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23917592	23919963	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:6;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23919964	23920035	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:7;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23919964	23920035	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:7;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23920036	23922354	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:7;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23922355	23922426	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:8;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23922355	23922426	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:8;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23922427	23929528	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:8;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23929529	23929600	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:9;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23929529	23929600	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:9;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23929601	23934287	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:9;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23934288	23934359	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:10;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23934288	23934359	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:10;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23934360	23936683	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:10;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23936684	23936755	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:11;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23936684	23936755	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:11;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23936756	23943838	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:11;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23943839	23943910	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:12;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23943839	23943910	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:12;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23943911	23953627	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:12;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23953628	23953699	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:13;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23953628	23953699	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:13;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23953700	23956011	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:13;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23956012	23956083	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:14;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23956012	23956083	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:14;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23956084	23958395	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:14;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23958396	23958467	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:15;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23958396	23958467	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:15;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23958468	23960780	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:15;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23960781	23960852	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:16;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23960781	23960852	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:16;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23960853	23963164	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:16;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23963165	23963236	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:17;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23963165	23963236	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:17;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23963237	23965548	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:17;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23965549	23965620	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:18;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23965549	23965620	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:18;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23965621	23967933	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:18;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23967934	23968005	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:19;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23967934	23968005	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:19;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23968006	23968749	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:19;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23968750	23968784	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:20;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23968750	23968784	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:20;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23968785	23973358	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:20;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23973359	23973457	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:21;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	23973359	23973422	.	+	1	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=CDS:NA12877_ch_T0001676:21;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	23973420	23973422	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=stop_codon:NA12877_ch_T0001676;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	23973458	23977420	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=intron:NA12877_ch_T0001676:21;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	23977421	23977920	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=ENST00000382433.4,ENST00000382433.4;transcript_id=NA12877_ch_T0001676;gene_id=NA12877_ch_G0000578;Parent=NA12877_ch_T0001676;transcript_name=NA12877_ch_T0001676;gene_name=DAZ2;ID=exon:NA12877_ch_T0001676:22;Name=DAZ2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24052643	24302790	.	+	.	source_gene_common_name=ENSG00000305624;source_gene=ENSG00000305624.1;gene_id=NA12877_ch_G0000579;gene_biotype=lncRNA;gene_name=ENSG00000305624;gene_sources=liftoff;ID=NA12877_ch_G0000579;Name=ENSG00000305624
NA12877_chrY	CAT	transcript	24052643	24294129	1000	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=NA12877_ch_T0001677;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24052643	24052785	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001677:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24052786	24067404	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001677:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24067405	24067494	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001677:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24067495	24076911	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001677:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24076912	24077115	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001677:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24077116	24079085	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001677:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24079086	24079275	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001677:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24079276	24079363	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001677:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24079364	24079476	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001677:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24079477	24080576	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001677:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24080577	24080618	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001677:5;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24080619	24150381	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001677:5;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001677:6;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24274620	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001677:6;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24274621	24274731	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001677:7;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24274732	24294070	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001677:7;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24294071	24294129	.	+	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001677;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001677;transcript_name=NA12877_ch_T0001677;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001677:8;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24123169	24302486	1000	+	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001680;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001680;gene_name=ENSG00000305624;ID=NA12877_ch_T0001680;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24123169	24123563	.	+	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001680;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001680;transcript_name=NA12877_ch_T0001680;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001680:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24123564	24150381	.	+	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001680;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001680;transcript_name=NA12877_ch_T0001680;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001680:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001680;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001680;transcript_name=NA12877_ch_T0001680;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001680:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24274620	.	+	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001680;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001680;transcript_name=NA12877_ch_T0001680;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001680:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24274621	24274731	.	+	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001680;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001680;transcript_name=NA12877_ch_T0001680;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001680:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24274732	24294070	.	+	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001680;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001680;transcript_name=NA12877_ch_T0001680;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001680:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24294071	24294171	.	+	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001680;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001680;transcript_name=NA12877_ch_T0001680;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001680:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24294172	24302148	.	+	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001680;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001680;transcript_name=NA12877_ch_T0001680;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001680:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24302149	24302486	.	+	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001680;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001680;transcript_name=NA12877_ch_T0001680;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001680:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24123175	24190557	1000	+	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001681;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001681;gene_name=ENSG00000305624;ID=NA12877_ch_T0001681;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24123175	24123563	.	+	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001681;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001681;transcript_name=NA12877_ch_T0001681;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001681:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24123564	24150381	.	+	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001681;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001681;transcript_name=NA12877_ch_T0001681;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001681:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001681;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001681;transcript_name=NA12877_ch_T0001681;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001681:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24160072	.	+	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001681;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001681;transcript_name=NA12877_ch_T0001681;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001681:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24160073	24160519	.	+	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001681;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001681;transcript_name=NA12877_ch_T0001681;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001681:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24160520	24188214	.	+	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001681;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001681;transcript_name=NA12877_ch_T0001681;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001681:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24188215	24188258	.	+	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001681;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001681;transcript_name=NA12877_ch_T0001681;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001681:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24188259	24189878	.	+	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001681;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001681;transcript_name=NA12877_ch_T0001681;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001681:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24189879	24190557	.	+	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001681;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001681;transcript_name=NA12877_ch_T0001681;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001681:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24131802	24302790	1000	+	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001683;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001683;gene_name=ENSG00000305624;ID=NA12877_ch_T0001683;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24131802	24132032	.	+	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001683;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001683;transcript_name=NA12877_ch_T0001683;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001683:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24132033	24150381	.	+	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001683;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001683;transcript_name=NA12877_ch_T0001683;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001683:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001683;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001683;transcript_name=NA12877_ch_T0001683;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001683:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24274620	.	+	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001683;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001683;transcript_name=NA12877_ch_T0001683;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001683:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24274621	24274731	.	+	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001683;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001683;transcript_name=NA12877_ch_T0001683;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001683:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24274732	24294070	.	+	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001683;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001683;transcript_name=NA12877_ch_T0001683;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001683:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24294071	24294171	.	+	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001683;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001683;transcript_name=NA12877_ch_T0001683;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001683:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24294172	24302529	.	+	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001683;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001683;transcript_name=NA12877_ch_T0001683;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001683:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24302530	24302790	.	+	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001683;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001683;transcript_name=NA12877_ch_T0001683;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001683:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24131837	24152925	1000	+	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001684;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001684;gene_name=ENSG00000305624;ID=NA12877_ch_T0001684;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24131837	24132032	.	+	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001684;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001684;transcript_name=NA12877_ch_T0001684;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001684:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24132033	24150381	.	+	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001684;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001684;transcript_name=NA12877_ch_T0001684;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001684:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001684;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001684;transcript_name=NA12877_ch_T0001684;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001684:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24152298	.	+	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001684;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001684;transcript_name=NA12877_ch_T0001684;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001684:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24152299	24152925	.	+	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001684;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001684;transcript_name=NA12877_ch_T0001684;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001684:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24131855	24298264	1000	+	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001685;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001685;gene_name=ENSG00000305624;ID=NA12877_ch_T0001685;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24131855	24132032	.	+	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001685;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001685;transcript_name=NA12877_ch_T0001685;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001685:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24132033	24150381	.	+	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001685;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001685;transcript_name=NA12877_ch_T0001685;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001685:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001685;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001685;transcript_name=NA12877_ch_T0001685;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001685:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24274620	.	+	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001685;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001685;transcript_name=NA12877_ch_T0001685;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001685:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24274621	24274731	.	+	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001685;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001685;transcript_name=NA12877_ch_T0001685;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001685:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24274732	24294070	.	+	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001685;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001685;transcript_name=NA12877_ch_T0001685;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001685:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24294071	24294171	.	+	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001685;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001685;transcript_name=NA12877_ch_T0001685;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001685:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24294172	24298046	.	+	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001685;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001685;transcript_name=NA12877_ch_T0001685;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001685:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24298047	24298264	.	+	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001685;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001685;transcript_name=NA12877_ch_T0001685;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001685:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24131863	24302486	1000	+	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001686;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001686;gene_name=ENSG00000305624;ID=NA12877_ch_T0001686;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24131863	24132032	.	+	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001686;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001686;transcript_name=NA12877_ch_T0001686;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001686:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24132033	24150381	.	+	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001686;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001686;transcript_name=NA12877_ch_T0001686;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001686:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001686;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001686;transcript_name=NA12877_ch_T0001686;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001686:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24274620	.	+	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001686;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001686;transcript_name=NA12877_ch_T0001686;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001686:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24274621	24274731	.	+	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001686;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001686;transcript_name=NA12877_ch_T0001686;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001686:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24274732	24294070	.	+	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001686;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001686;transcript_name=NA12877_ch_T0001686;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001686:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24294071	24294171	.	+	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001686;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001686;transcript_name=NA12877_ch_T0001686;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001686:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24294172	24302148	.	+	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001686;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001686;transcript_name=NA12877_ch_T0001686;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001686:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24302149	24302486	.	+	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001686;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001686;transcript_name=NA12877_ch_T0001686;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001686:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24131865	24220251	1000	+	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001687;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001687;gene_name=ENSG00000305624;ID=NA12877_ch_T0001687;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24131865	24132032	.	+	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001687;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001687;transcript_name=NA12877_ch_T0001687;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001687:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24132033	24150381	.	+	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001687;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001687;transcript_name=NA12877_ch_T0001687;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001687:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001687;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001687;transcript_name=NA12877_ch_T0001687;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001687:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24220072	.	+	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001687;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001687;transcript_name=NA12877_ch_T0001687;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001687:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24220073	24220251	.	+	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001687;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001687;transcript_name=NA12877_ch_T0001687;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001687:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24131877	24188629	1000	+	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001688;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001688;gene_name=ENSG00000305624;ID=NA12877_ch_T0001688;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24131877	24132032	.	+	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001688;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001688;transcript_name=NA12877_ch_T0001688;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001688:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24132033	24150381	.	+	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001688;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001688;transcript_name=NA12877_ch_T0001688;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001688:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001688;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001688;transcript_name=NA12877_ch_T0001688;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001688:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24160072	.	+	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001688;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001688;transcript_name=NA12877_ch_T0001688;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001688:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24160073	24160199	.	+	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001688;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001688;transcript_name=NA12877_ch_T0001688;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001688:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24160200	24188214	.	+	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001688;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001688;transcript_name=NA12877_ch_T0001688;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001688:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24188215	24188629	.	+	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001688;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001688;transcript_name=NA12877_ch_T0001688;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001688:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24131881	24220251	1000	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=NA12877_ch_T0001689;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24131881	24132032	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001689:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24132033	24150381	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001689:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001689:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24188214	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001689:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24188215	24188258	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001689:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24188259	24212941	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001689:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24212942	24213057	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001689:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24213058	24213143	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001689:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24213144	24213289	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001689:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24213290	24213399	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001689:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24213400	24213494	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001689:5;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24213495	24220072	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001689:5;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24220073	24220251	.	+	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001689;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001689;transcript_name=NA12877_ch_T0001689;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001689:6;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24131881	24302486	1000	+	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001690;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001690;gene_name=ENSG00000305624;ID=NA12877_ch_T0001690;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24131881	24132032	.	+	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001690;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001690;transcript_name=NA12877_ch_T0001690;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001690:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24132033	24144750	.	+	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001690;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001690;transcript_name=NA12877_ch_T0001690;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001690:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24144751	24144767	.	+	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001690;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001690;transcript_name=NA12877_ch_T0001690;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001690:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24144768	24150381	.	+	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001690;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001690;transcript_name=NA12877_ch_T0001690;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001690:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001690;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001690;transcript_name=NA12877_ch_T0001690;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001690:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24274620	.	+	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001690;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001690;transcript_name=NA12877_ch_T0001690;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001690:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24274621	24274731	.	+	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001690;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001690;transcript_name=NA12877_ch_T0001690;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001690:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24274732	24294070	.	+	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001690;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001690;transcript_name=NA12877_ch_T0001690;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001690:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24294071	24294171	.	+	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001690;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001690;transcript_name=NA12877_ch_T0001690;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001690:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24294172	24302148	.	+	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001690;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001690;transcript_name=NA12877_ch_T0001690;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001690:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24302149	24302486	.	+	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001690;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001690;transcript_name=NA12877_ch_T0001690;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001690:5;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24131882	24152925	1000	+	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001691;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001691;gene_name=ENSG00000305624;ID=NA12877_ch_T0001691;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24131882	24132032	.	+	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001691;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001691;transcript_name=NA12877_ch_T0001691;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001691:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24132033	24144750	.	+	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001691;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001691;transcript_name=NA12877_ch_T0001691;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001691:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24144751	24144767	.	+	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001691;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001691;transcript_name=NA12877_ch_T0001691;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001691:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24144768	24150381	.	+	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001691;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001691;transcript_name=NA12877_ch_T0001691;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001691:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001691;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001691;transcript_name=NA12877_ch_T0001691;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001691:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24152298	.	+	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001691;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001691;transcript_name=NA12877_ch_T0001691;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001691:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24152299	24152925	.	+	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001691;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001691;transcript_name=NA12877_ch_T0001691;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001691:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24131939	24298264	1000	+	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001692;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_G0000579;transcript_name=NA12877_ch_T0001692;gene_name=ENSG00000305624;ID=NA12877_ch_T0001692;Name=ENSG00000305624
NA12877_chrY	CAT	exon	24131939	24132032	.	+	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001692;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001692;transcript_name=NA12877_ch_T0001692;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001692:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24132033	24144750	.	+	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001692;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001692;transcript_name=NA12877_ch_T0001692;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001692:0;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24144751	24144767	.	+	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001692;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001692;transcript_name=NA12877_ch_T0001692;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001692:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24144768	24150381	.	+	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001692;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001692;transcript_name=NA12877_ch_T0001692;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001692:1;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24150382	24150454	.	+	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001692;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001692;transcript_name=NA12877_ch_T0001692;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001692:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24274620	.	+	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001692;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001692;transcript_name=NA12877_ch_T0001692;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001692:2;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24274621	24274731	.	+	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001692;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001692;transcript_name=NA12877_ch_T0001692;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001692:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24274732	24294070	.	+	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001692;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001692;transcript_name=NA12877_ch_T0001692;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001692:3;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24294071	24294171	.	+	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001692;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001692;transcript_name=NA12877_ch_T0001692;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001692:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24294172	24298046	.	+	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001692;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001692;transcript_name=NA12877_ch_T0001692;gene_name=ENSG00000305624;ID=intron:NA12877_ch_T0001692:4;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24298047	24298264	.	+	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=NA12877_ch_T0001692;gene_id=NA12877_ch_G0000579;Parent=NA12877_ch_T0001692;transcript_name=NA12877_ch_T0001692;gene_name=ENSG00000305624;ID=exon:NA12877_ch_T0001692:5;Name=ENSG00000305624;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24067405	24080618	.	+	.	source_gene_common_name=PPP1R12BP2;source_gene=ENSG00000205936.3;gene_id=NA12877_ch_G0000580;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=PPP1R12BP2;gene_sources=liftoff;ID=NA12877_ch_G0000580;Name=PPP1R12BP2
NA12877_chrY	CAT	transcript	24067405	24080618	1000	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=NA12877_ch_T0001678;gene_id=NA12877_ch_G0000580;Parent=NA12877_ch_G0000580;transcript_name=NA12877_ch_T0001678;gene_name=PPP1R12BP2;ID=NA12877_ch_T0001678;Name=PPP1R12BP2
NA12877_chrY	CAT	exon	24067405	24067494	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=NA12877_ch_T0001678;gene_id=NA12877_ch_G0000580;Parent=NA12877_ch_T0001678;transcript_name=NA12877_ch_T0001678;gene_name=PPP1R12BP2;ID=exon:NA12877_ch_T0001678:0;Name=PPP1R12BP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24067495	24076911	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=NA12877_ch_T0001678;gene_id=NA12877_ch_G0000580;Parent=NA12877_ch_T0001678;transcript_name=NA12877_ch_T0001678;gene_name=PPP1R12BP2;ID=intron:NA12877_ch_T0001678:0;Name=PPP1R12BP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24076912	24077115	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=NA12877_ch_T0001678;gene_id=NA12877_ch_G0000580;Parent=NA12877_ch_T0001678;transcript_name=NA12877_ch_T0001678;gene_name=PPP1R12BP2;ID=exon:NA12877_ch_T0001678:1;Name=PPP1R12BP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24077116	24079085	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=NA12877_ch_T0001678;gene_id=NA12877_ch_G0000580;Parent=NA12877_ch_T0001678;transcript_name=NA12877_ch_T0001678;gene_name=PPP1R12BP2;ID=intron:NA12877_ch_T0001678:1;Name=PPP1R12BP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24079086	24079275	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=NA12877_ch_T0001678;gene_id=NA12877_ch_G0000580;Parent=NA12877_ch_T0001678;transcript_name=NA12877_ch_T0001678;gene_name=PPP1R12BP2;ID=exon:NA12877_ch_T0001678:2;Name=PPP1R12BP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24079276	24079363	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=NA12877_ch_T0001678;gene_id=NA12877_ch_G0000580;Parent=NA12877_ch_T0001678;transcript_name=NA12877_ch_T0001678;gene_name=PPP1R12BP2;ID=intron:NA12877_ch_T0001678:2;Name=PPP1R12BP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24079364	24079476	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=NA12877_ch_T0001678;gene_id=NA12877_ch_G0000580;Parent=NA12877_ch_T0001678;transcript_name=NA12877_ch_T0001678;gene_name=PPP1R12BP2;ID=exon:NA12877_ch_T0001678:3;Name=PPP1R12BP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24079477	24080576	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=NA12877_ch_T0001678;gene_id=NA12877_ch_G0000580;Parent=NA12877_ch_T0001678;transcript_name=NA12877_ch_T0001678;gene_name=PPP1R12BP2;ID=intron:NA12877_ch_T0001678:3;Name=PPP1R12BP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24080577	24080618	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=NA12877_ch_T0001678;gene_id=NA12877_ch_G0000580;Parent=NA12877_ch_T0001678;transcript_name=NA12877_ch_T0001678;gene_name=PPP1R12BP2;ID=exon:NA12877_ch_T0001678:4;Name=PPP1R12BP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24111020	24111157	.	-	.	source_gene_common_name=SNORA70;source_gene=ENSG00000251925.1;alternative_source_transcripts=ENST00000516116.1,ENST00000516116.1;gene_id=NA12877_ch_G0000581;gene_biotype=snoRNA;gene_name=SNORA70;gene_sources=liftoff;ID=NA12877_ch_G0000581;Name=SNORA70
NA12877_chrY	CAT	transcript	24111020	24111157	1000	-	.	source_transcript=ENST00000516116.1;source_transcript_name=SNORA70.13-201;source_gene=ENSG00000251925.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251925.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516116.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000516116.1,ENST00000516116.1;transcript_id=NA12877_ch_T0001679;gene_id=NA12877_ch_G0000581;Parent=NA12877_ch_G0000581;transcript_name=NA12877_ch_T0001679;gene_name=SNORA70;ID=NA12877_ch_T0001679;Name=SNORA70
NA12877_chrY	CAT	exon	24111020	24111157	.	-	.	source_transcript=ENST00000516116.1;source_transcript_name=SNORA70.13-201;source_gene=ENSG00000251925.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251925.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516116.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000516116.1,ENST00000516116.1;transcript_id=NA12877_ch_T0001679;gene_id=NA12877_ch_G0000581;Parent=NA12877_ch_T0001679;transcript_name=NA12877_ch_T0001679;gene_name=SNORA70;ID=exon:NA12877_ch_T0001679:0;Name=SNORA70;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24123824	24123925	.	+	.	source_gene_common_name=ENSG00000286744;source_gene=ENSG00000286744.1;alternative_source_transcripts=ENST00000662956.1,ENST00000662956.1;gene_id=NA12877_ch_G0000582;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000286744;gene_sources=liftoff;ID=NA12877_ch_G0000582;Name=ENSG00000286744
NA12877_chrY	CAT	transcript	24123824	24123925	1000	+	.	source_transcript=ENST00000662956.1;source_transcript_name=ENST00000662956;source_gene=ENSG00000286744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000286744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000662956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662956.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286744;alternative_source_transcripts=ENST00000662956.1,ENST00000662956.1;transcript_id=NA12877_ch_T0001682;gene_id=NA12877_ch_G0000582;Parent=NA12877_ch_G0000582;transcript_name=NA12877_ch_T0001682;gene_name=ENSG00000286744;ID=NA12877_ch_T0001682;Name=ENSG00000286744
NA12877_chrY	CAT	exon	24123824	24123925	.	+	.	source_transcript=ENST00000662956.1;source_transcript_name=ENST00000662956;source_gene=ENSG00000286744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000286744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000662956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662956.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286744;alternative_source_transcripts=ENST00000662956.1,ENST00000662956.1;transcript_id=NA12877_ch_T0001682;gene_id=NA12877_ch_G0000582;Parent=NA12877_ch_T0001682;transcript_name=NA12877_ch_T0001682;gene_name=ENSG00000286744;ID=exon:NA12877_ch_T0001682:0;Name=ENSG00000286744;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24150384	24160199	.	+	.	source_gene_common_name=REREP1Y;source_gene=ENSG00000225189.1;gene_id=NA12877_ch_G0000583;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=NA12877_ch_G0000583;Name=REREP1Y
NA12877_chrY	CAT	transcript	24150384	24160199	1000	+	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=NA12877_ch_T0001693;gene_id=NA12877_ch_G0000583;Parent=NA12877_ch_G0000583;transcript_name=NA12877_ch_T0001693;gene_name=REREP1Y;ID=NA12877_ch_T0001693;Name=REREP1Y
NA12877_chrY	CAT	exon	24150384	24150454	.	+	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=NA12877_ch_T0001693;gene_id=NA12877_ch_G0000583;Parent=NA12877_ch_T0001693;transcript_name=NA12877_ch_T0001693;gene_name=REREP1Y;ID=exon:NA12877_ch_T0001693:0;Name=REREP1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24150455	24160072	.	+	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=NA12877_ch_T0001693;gene_id=NA12877_ch_G0000583;Parent=NA12877_ch_T0001693;transcript_name=NA12877_ch_T0001693;gene_name=REREP1Y;ID=intron:NA12877_ch_T0001693:0;Name=REREP1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24160073	24160199	.	+	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=NA12877_ch_T0001693;gene_id=NA12877_ch_G0000583;Parent=NA12877_ch_T0001693;transcript_name=NA12877_ch_T0001693;gene_name=REREP1Y;ID=exon:NA12877_ch_T0001693:1;Name=REREP1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24211241	24213289	.	+	.	source_gene_common_name=ENSG00000230073;source_gene=ENSG00000230073.1;gene_id=NA12877_ch_G0000584;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000230073;gene_sources=liftoff;ID=NA12877_ch_G0000584;Name=ENSG00000230073
NA12877_chrY	CAT	transcript	24211241	24213289	1000	+	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=NA12877_ch_T0001694;gene_id=NA12877_ch_G0000584;Parent=NA12877_ch_G0000584;transcript_name=NA12877_ch_T0001694;gene_name=ENSG00000230073;ID=NA12877_ch_T0001694;Name=ENSG00000230073
NA12877_chrY	CAT	exon	24211241	24211642	.	+	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=NA12877_ch_T0001694;gene_id=NA12877_ch_G0000584;Parent=NA12877_ch_T0001694;transcript_name=NA12877_ch_T0001694;gene_name=ENSG00000230073;ID=exon:NA12877_ch_T0001694:0;Name=ENSG00000230073;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24211643	24212672	.	+	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=NA12877_ch_T0001694;gene_id=NA12877_ch_G0000584;Parent=NA12877_ch_T0001694;transcript_name=NA12877_ch_T0001694;gene_name=ENSG00000230073;ID=intron:NA12877_ch_T0001694:0;Name=ENSG00000230073;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24212673	24212729	.	+	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=NA12877_ch_T0001694;gene_id=NA12877_ch_G0000584;Parent=NA12877_ch_T0001694;transcript_name=NA12877_ch_T0001694;gene_name=ENSG00000230073;ID=exon:NA12877_ch_T0001694:1;Name=ENSG00000230073;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24212730	24212929	.	+	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=NA12877_ch_T0001694;gene_id=NA12877_ch_G0000584;Parent=NA12877_ch_T0001694;transcript_name=NA12877_ch_T0001694;gene_name=ENSG00000230073;ID=intron:NA12877_ch_T0001694:1;Name=ENSG00000230073;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24212930	24213053	.	+	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=NA12877_ch_T0001694;gene_id=NA12877_ch_G0000584;Parent=NA12877_ch_T0001694;transcript_name=NA12877_ch_T0001694;gene_name=ENSG00000230073;ID=exon:NA12877_ch_T0001694:2;Name=ENSG00000230073;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24213054	24213145	.	+	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=NA12877_ch_T0001694;gene_id=NA12877_ch_G0000584;Parent=NA12877_ch_T0001694;transcript_name=NA12877_ch_T0001694;gene_name=ENSG00000230073;ID=intron:NA12877_ch_T0001694:2;Name=ENSG00000230073;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24213146	24213289	.	+	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=NA12877_ch_T0001694;gene_id=NA12877_ch_G0000584;Parent=NA12877_ch_T0001694;transcript_name=NA12877_ch_T0001694;gene_name=ENSG00000230073;ID=exon:NA12877_ch_T0001694:3;Name=ENSG00000230073;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24225228	24234862	.	-	.	source_gene_common_name=RBMY2CP;source_gene=ENSG00000215540.11;gene_id=NA12877_ch_G0000585;gene_biotype=transcribed_processed_pseudogene;gene_name=RBMY2CP;gene_sources=liftoff;ID=NA12877_ch_G0000585;Name=RBMY2CP
NA12877_chrY	CAT	transcript	24225228	24234862	1000	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_G0000585;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=NA12877_ch_T0001695;Name=RBMY2CP
NA12877_chrY	CAT	exon	24225228	24225526	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=exon:NA12877_ch_T0001695:0;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24225527	24225950	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=intron:NA12877_ch_T0001695:0;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24225951	24226038	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=exon:NA12877_ch_T0001695:1;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24226039	24226120	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=intron:NA12877_ch_T0001695:1;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24226121	24226231	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=exon:NA12877_ch_T0001695:2;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24226232	24227100	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=intron:NA12877_ch_T0001695:2;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24227101	24227215	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=exon:NA12877_ch_T0001695:3;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24227216	24229222	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=intron:NA12877_ch_T0001695:3;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24229223	24229375	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=exon:NA12877_ch_T0001695:4;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24229376	24231310	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=intron:NA12877_ch_T0001695:4;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24231311	24231488	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=exon:NA12877_ch_T0001695:5;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24231489	24234196	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=intron:NA12877_ch_T0001695:5;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24234197	24234300	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=exon:NA12877_ch_T0001695:6;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24234301	24234753	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=intron:NA12877_ch_T0001695:6;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24234754	24234862	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=NA12877_ch_T0001695;gene_id=NA12877_ch_G0000585;Parent=NA12877_ch_T0001695;transcript_name=NA12877_ch_T0001695;gene_name=RBMY2CP;ID=exon:NA12877_ch_T0001695:7;Name=RBMY2CP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24227018	24236864	.	-	.	source_gene_common_name=ENSG00000293249;source_gene=ENSG00000293249.2;gene_id=NA12877_ch_G0000586;gene_biotype=lncRNA;gene_name=ENSG00000293249;gene_sources=liftoff;ID=NA12877_ch_G0000586;Name=ENSG00000293249
NA12877_chrY	CAT	transcript	24227018	24236864	1000	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_G0000586;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=NA12877_ch_T0001696;Name=ENSG00000293249
NA12877_chrY	CAT	exon	24227018	24227215	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001696:0;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24227216	24229222	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001696:0;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24229223	24229375	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001696:1;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24229376	24231310	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001696:1;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24231311	24231488	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001696:2;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24231489	24234196	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001696:2;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24234197	24234300	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001696:3;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24234301	24234753	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001696:3;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24234754	24234866	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001696:4;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24234867	24235880	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001696:4;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24235881	24235960	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001696:5;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24235961	24236714	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001696:5;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24236715	24236864	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001696;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001696;transcript_name=NA12877_ch_T0001696;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001696:6;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24228385	24236836	1000	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_G0000586;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=NA12877_ch_T0001697;Name=ENSG00000293249
NA12877_chrY	CAT	exon	24228385	24228644	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001697:0;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24228645	24229222	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001697:0;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24229223	24229375	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001697:1;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24229376	24231310	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001697:1;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24231311	24231488	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001697:2;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24231489	24234196	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001697:2;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24234197	24234300	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001697:3;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24234301	24234753	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001697:3;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24234754	24234866	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001697:4;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24234867	24235880	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001697:4;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24235881	24236063	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001697:5;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24236064	24236714	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001697:5;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24236715	24236836	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001697;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001697;transcript_name=NA12877_ch_T0001697;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001697:6;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24228385	24236845	1000	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_G0000586;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=NA12877_ch_T0001698;Name=ENSG00000293249
NA12877_chrY	CAT	exon	24228385	24228644	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001698:0;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24228645	24229222	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001698:0;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24229223	24229375	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001698:1;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24229376	24231310	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001698:1;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24231311	24231488	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001698:2;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24231489	24234196	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001698:2;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24234197	24234300	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001698:3;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24234301	24234753	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001698:3;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24234754	24234866	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001698:4;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24234867	24235880	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001698:4;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24235881	24235960	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001698:5;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24235961	24236714	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=intron:NA12877_ch_T0001698:5;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24236715	24236845	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=NA12877_ch_T0001698;gene_id=NA12877_ch_G0000586;Parent=NA12877_ch_T0001698;transcript_name=NA12877_ch_T0001698;gene_name=ENSG00000293249;ID=exon:NA12877_ch_T0001698:6;Name=ENSG00000293249;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24237729	24239305	.	+	.	source_gene_common_name=ENSG00000236647;source_gene=ENSG00000236647.1;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;gene_id=NA12877_ch_G0000587;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236647;gene_sources=liftoff;ID=NA12877_ch_G0000587;Name=ENSG00000236647
NA12877_chrY	CAT	transcript	24237729	24239305	1000	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=NA12877_ch_T0001699;gene_id=NA12877_ch_G0000587;Parent=NA12877_ch_G0000587;transcript_name=NA12877_ch_T0001699;gene_name=ENSG00000236647;ID=NA12877_ch_T0001699;Name=ENSG00000236647
NA12877_chrY	CAT	exon	24237729	24238070	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=NA12877_ch_T0001699;gene_id=NA12877_ch_G0000587;Parent=NA12877_ch_T0001699;transcript_name=NA12877_ch_T0001699;gene_name=ENSG00000236647;ID=exon:NA12877_ch_T0001699:0;Name=ENSG00000236647;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24238071	24238534	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=NA12877_ch_T0001699;gene_id=NA12877_ch_G0000587;Parent=NA12877_ch_T0001699;transcript_name=NA12877_ch_T0001699;gene_name=ENSG00000236647;ID=intron:NA12877_ch_T0001699:0;Name=ENSG00000236647;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24238535	24238573	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=NA12877_ch_T0001699;gene_id=NA12877_ch_G0000587;Parent=NA12877_ch_T0001699;transcript_name=NA12877_ch_T0001699;gene_name=ENSG00000236647;ID=exon:NA12877_ch_T0001699:1;Name=ENSG00000236647;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24238574	24238802	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=NA12877_ch_T0001699;gene_id=NA12877_ch_G0000587;Parent=NA12877_ch_T0001699;transcript_name=NA12877_ch_T0001699;gene_name=ENSG00000236647;ID=intron:NA12877_ch_T0001699:1;Name=ENSG00000236647;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24238803	24238877	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=NA12877_ch_T0001699;gene_id=NA12877_ch_G0000587;Parent=NA12877_ch_T0001699;transcript_name=NA12877_ch_T0001699;gene_name=ENSG00000236647;ID=exon:NA12877_ch_T0001699:2;Name=ENSG00000236647;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24238878	24238972	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=NA12877_ch_T0001699;gene_id=NA12877_ch_G0000587;Parent=NA12877_ch_T0001699;transcript_name=NA12877_ch_T0001699;gene_name=ENSG00000236647;ID=intron:NA12877_ch_T0001699:2;Name=ENSG00000236647;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24238973	24239112	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=NA12877_ch_T0001699;gene_id=NA12877_ch_G0000587;Parent=NA12877_ch_T0001699;transcript_name=NA12877_ch_T0001699;gene_name=ENSG00000236647;ID=exon:NA12877_ch_T0001699:3;Name=ENSG00000236647;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24239113	24239229	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=NA12877_ch_T0001699;gene_id=NA12877_ch_G0000587;Parent=NA12877_ch_T0001699;transcript_name=NA12877_ch_T0001699;gene_name=ENSG00000236647;ID=intron:NA12877_ch_T0001699:3;Name=ENSG00000236647;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24239230	24239305	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=NA12877_ch_T0001699;gene_id=NA12877_ch_G0000587;Parent=NA12877_ch_T0001699;transcript_name=NA12877_ch_T0001699;gene_name=ENSG00000236647;ID=exon:NA12877_ch_T0001699:4;Name=ENSG00000236647;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24243079	24248532	.	-	.	source_gene_common_name=ENSG00000305658;source_gene=ENSG00000305658.1;alternative_source_transcripts=ENST00000812264.1,ENST00000812264.1;gene_id=NA12877_ch_G0000588;gene_biotype=lncRNA;gene_name=ENSG00000305658;gene_sources=liftoff;ID=NA12877_ch_G0000588;Name=ENSG00000305658
NA12877_chrY	CAT	transcript	24243079	24248532	1000	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1,ENST00000812264.1;transcript_id=NA12877_ch_T0001700;gene_id=NA12877_ch_G0000588;Parent=NA12877_ch_G0000588;transcript_name=NA12877_ch_T0001700;gene_name=ENSG00000305658;ID=NA12877_ch_T0001700;Name=ENSG00000305658
NA12877_chrY	CAT	exon	24243079	24243784	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1,ENST00000812264.1;transcript_id=NA12877_ch_T0001700;gene_id=NA12877_ch_G0000588;Parent=NA12877_ch_T0001700;transcript_name=NA12877_ch_T0001700;gene_name=ENSG00000305658;ID=exon:NA12877_ch_T0001700:0;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24243785	24244148	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1,ENST00000812264.1;transcript_id=NA12877_ch_T0001700;gene_id=NA12877_ch_G0000588;Parent=NA12877_ch_T0001700;transcript_name=NA12877_ch_T0001700;gene_name=ENSG00000305658;ID=intron:NA12877_ch_T0001700:0;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24244149	24244275	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1,ENST00000812264.1;transcript_id=NA12877_ch_T0001700;gene_id=NA12877_ch_G0000588;Parent=NA12877_ch_T0001700;transcript_name=NA12877_ch_T0001700;gene_name=ENSG00000305658;ID=exon:NA12877_ch_T0001700:1;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24244276	24246143	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1,ENST00000812264.1;transcript_id=NA12877_ch_T0001700;gene_id=NA12877_ch_G0000588;Parent=NA12877_ch_T0001700;transcript_name=NA12877_ch_T0001700;gene_name=ENSG00000305658;ID=intron:NA12877_ch_T0001700:1;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24246144	24246277	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1,ENST00000812264.1;transcript_id=NA12877_ch_T0001700;gene_id=NA12877_ch_G0000588;Parent=NA12877_ch_T0001700;transcript_name=NA12877_ch_T0001700;gene_name=ENSG00000305658;ID=exon:NA12877_ch_T0001700:2;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24246278	24248193	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1,ENST00000812264.1;transcript_id=NA12877_ch_T0001700;gene_id=NA12877_ch_G0000588;Parent=NA12877_ch_T0001700;transcript_name=NA12877_ch_T0001700;gene_name=ENSG00000305658;ID=intron:NA12877_ch_T0001700:2;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24248194	24248532	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000812264.1,ENST00000812264.1;transcript_id=NA12877_ch_T0001700;gene_id=NA12877_ch_G0000588;Parent=NA12877_ch_T0001700;transcript_name=NA12877_ch_T0001700;gene_name=ENSG00000305658;ID=exon:NA12877_ch_T0001700:3;Name=ENSG00000305658;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24269516	24302561	.	+	.	source_gene_common_name=OFD1P10Y;source_gene=ENSG00000225466.1;gene_id=NA12877_ch_G0000589;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P10Y;gene_sources=liftoff;ID=NA12877_ch_G0000589;Name=OFD1P10Y
NA12877_chrY	CAT	transcript	24269516	24302561	1000	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_G0000589;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=NA12877_ch_T0001701;Name=OFD1P10Y
NA12877_chrY	CAT	exon	24269516	24269622	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=exon:NA12877_ch_T0001701:0;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24269623	24271143	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=intron:NA12877_ch_T0001701:0;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24271144	24271268	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=exon:NA12877_ch_T0001701:1;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24271269	24271804	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=intron:NA12877_ch_T0001701:1;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24271805	24271914	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=exon:NA12877_ch_T0001701:2;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24271915	24273631	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=intron:NA12877_ch_T0001701:2;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24273632	24274247	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=exon:NA12877_ch_T0001701:3;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24274248	24274620	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=intron:NA12877_ch_T0001701:3;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24274621	24274725	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=exon:NA12877_ch_T0001701:4;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24274726	24294070	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=intron:NA12877_ch_T0001701:4;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24294071	24294171	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=exon:NA12877_ch_T0001701:5;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24294172	24300805	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=intron:NA12877_ch_T0001701:5;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24300806	24300960	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=exon:NA12877_ch_T0001701:6;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24300961	24302148	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=intron:NA12877_ch_T0001701:6;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24302149	24302230	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=exon:NA12877_ch_T0001701:7;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24302231	24302529	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=intron:NA12877_ch_T0001701:7;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24302530	24302561	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=NA12877_ch_T0001701;gene_id=NA12877_ch_G0000589;Parent=NA12877_ch_T0001701;transcript_name=NA12877_ch_T0001701;gene_name=OFD1P10Y;ID=exon:NA12877_ch_T0001701:8;Name=OFD1P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24325541	24328707	.	+	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;gene_id=NA12877_ch_G0000590;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=NA12877_ch_G0000590;Name=ENSG00000295422
NA12877_chrY	CAT	transcript	24325541	24328707	1000	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;transcript_id=NA12877_ch_T0001702;gene_id=NA12877_ch_G0000590;Parent=NA12877_ch_G0000590;transcript_name=NA12877_ch_T0001702;gene_name=ENSG00000295422;ID=NA12877_ch_T0001702;Name=ENSG00000295422
NA12877_chrY	CAT	exon	24325541	24325651	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;transcript_id=NA12877_ch_T0001702;gene_id=NA12877_ch_G0000590;Parent=NA12877_ch_T0001702;transcript_name=NA12877_ch_T0001702;gene_name=ENSG00000295422;ID=exon:NA12877_ch_T0001702:0;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24325652	24325768	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;transcript_id=NA12877_ch_T0001702;gene_id=NA12877_ch_G0000590;Parent=NA12877_ch_T0001702;transcript_name=NA12877_ch_T0001702;gene_name=ENSG00000295422;ID=intron:NA12877_ch_T0001702:0;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24325769	24325829	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;transcript_id=NA12877_ch_T0001702;gene_id=NA12877_ch_G0000590;Parent=NA12877_ch_T0001702;transcript_name=NA12877_ch_T0001702;gene_name=ENSG00000295422;ID=exon:NA12877_ch_T0001702:1;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24325830	24327364	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;transcript_id=NA12877_ch_T0001702;gene_id=NA12877_ch_G0000590;Parent=NA12877_ch_T0001702;transcript_name=NA12877_ch_T0001702;gene_name=ENSG00000295422;ID=intron:NA12877_ch_T0001702:1;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24327365	24328707	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;transcript_id=NA12877_ch_T0001702;gene_id=NA12877_ch_G0000590;Parent=NA12877_ch_T0001702;transcript_name=NA12877_ch_T0001702;gene_name=ENSG00000295422;ID=exon:NA12877_ch_T0001702:2;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24345757	24346976	.	-	.	source_gene_common_name=HSFY6P;source_gene=ENSG00000224169.1;alternative_source_transcripts=ENST00000445573.1,ENST00000445573.1;gene_id=NA12877_ch_G0000591;gene_biotype=unprocessed_pseudogene;gene_name=HSFY6P;gene_sources=liftoff;ID=NA12877_ch_G0000591;Name=HSFY6P
NA12877_chrY	CAT	transcript	24345757	24346976	1000	-	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;alternative_source_transcripts=ENST00000445573.1,ENST00000445573.1;transcript_id=NA12877_ch_T0001703;gene_id=NA12877_ch_G0000591;Parent=NA12877_ch_G0000591;transcript_name=NA12877_ch_T0001703;gene_name=HSFY6P;ID=NA12877_ch_T0001703;Name=HSFY6P
NA12877_chrY	CAT	exon	24345757	24345915	.	-	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;alternative_source_transcripts=ENST00000445573.1,ENST00000445573.1;transcript_id=NA12877_ch_T0001703;gene_id=NA12877_ch_G0000591;Parent=NA12877_ch_T0001703;transcript_name=NA12877_ch_T0001703;gene_name=HSFY6P;ID=exon:NA12877_ch_T0001703:0;Name=HSFY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24345916	24346400	.	-	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;alternative_source_transcripts=ENST00000445573.1,ENST00000445573.1;transcript_id=NA12877_ch_T0001703;gene_id=NA12877_ch_G0000591;Parent=NA12877_ch_T0001703;transcript_name=NA12877_ch_T0001703;gene_name=HSFY6P;ID=intron:NA12877_ch_T0001703:0;Name=HSFY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24346401	24346560	.	-	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;alternative_source_transcripts=ENST00000445573.1,ENST00000445573.1;transcript_id=NA12877_ch_T0001703;gene_id=NA12877_ch_G0000591;Parent=NA12877_ch_T0001703;transcript_name=NA12877_ch_T0001703;gene_name=HSFY6P;ID=exon:NA12877_ch_T0001703:1;Name=HSFY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24346561	24346892	.	-	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;alternative_source_transcripts=ENST00000445573.1,ENST00000445573.1;transcript_id=NA12877_ch_T0001703;gene_id=NA12877_ch_G0000591;Parent=NA12877_ch_T0001703;transcript_name=NA12877_ch_T0001703;gene_name=HSFY6P;ID=intron:NA12877_ch_T0001703:1;Name=HSFY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24346893	24346976	.	-	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;alternative_source_transcripts=ENST00000445573.1,ENST00000445573.1;transcript_id=NA12877_ch_T0001703;gene_id=NA12877_ch_G0000591;Parent=NA12877_ch_T0001703;transcript_name=NA12877_ch_T0001703;gene_name=HSFY6P;ID=exon:NA12877_ch_T0001703:2;Name=HSFY6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24347384	24355740	.	-	.	source_gene_common_name=USP9YP18;source_gene=ENSG00000223407.1;alternative_source_transcripts=ENST00000425912.1,ENST00000425912.1;gene_id=NA12877_ch_G0000592;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP18;gene_sources=liftoff;ID=NA12877_ch_G0000592;Name=USP9YP18
NA12877_chrY	CAT	transcript	24347384	24355740	1000	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1,ENST00000425912.1;transcript_id=NA12877_ch_T0001704;gene_id=NA12877_ch_G0000592;Parent=NA12877_ch_G0000592;transcript_name=NA12877_ch_T0001704;gene_name=USP9YP18;ID=NA12877_ch_T0001704;Name=USP9YP18
NA12877_chrY	CAT	exon	24347384	24347422	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1,ENST00000425912.1;transcript_id=NA12877_ch_T0001704;gene_id=NA12877_ch_G0000592;Parent=NA12877_ch_T0001704;transcript_name=NA12877_ch_T0001704;gene_name=USP9YP18;ID=exon:NA12877_ch_T0001704:0;Name=USP9YP18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24347423	24349137	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1,ENST00000425912.1;transcript_id=NA12877_ch_T0001704;gene_id=NA12877_ch_G0000592;Parent=NA12877_ch_T0001704;transcript_name=NA12877_ch_T0001704;gene_name=USP9YP18;ID=intron:NA12877_ch_T0001704:0;Name=USP9YP18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24349138	24349267	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1,ENST00000425912.1;transcript_id=NA12877_ch_T0001704;gene_id=NA12877_ch_G0000592;Parent=NA12877_ch_T0001704;transcript_name=NA12877_ch_T0001704;gene_name=USP9YP18;ID=exon:NA12877_ch_T0001704:1;Name=USP9YP18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24349268	24351625	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1,ENST00000425912.1;transcript_id=NA12877_ch_T0001704;gene_id=NA12877_ch_G0000592;Parent=NA12877_ch_T0001704;transcript_name=NA12877_ch_T0001704;gene_name=USP9YP18;ID=intron:NA12877_ch_T0001704:1;Name=USP9YP18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24351626	24351814	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1,ENST00000425912.1;transcript_id=NA12877_ch_T0001704;gene_id=NA12877_ch_G0000592;Parent=NA12877_ch_T0001704;transcript_name=NA12877_ch_T0001704;gene_name=USP9YP18;ID=exon:NA12877_ch_T0001704:2;Name=USP9YP18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24351815	24353600	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1,ENST00000425912.1;transcript_id=NA12877_ch_T0001704;gene_id=NA12877_ch_G0000592;Parent=NA12877_ch_T0001704;transcript_name=NA12877_ch_T0001704;gene_name=USP9YP18;ID=intron:NA12877_ch_T0001704:2;Name=USP9YP18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24353601	24353716	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1,ENST00000425912.1;transcript_id=NA12877_ch_T0001704;gene_id=NA12877_ch_G0000592;Parent=NA12877_ch_T0001704;transcript_name=NA12877_ch_T0001704;gene_name=USP9YP18;ID=exon:NA12877_ch_T0001704:3;Name=USP9YP18;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24353717	24355519	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1,ENST00000425912.1;transcript_id=NA12877_ch_T0001704;gene_id=NA12877_ch_G0000592;Parent=NA12877_ch_T0001704;transcript_name=NA12877_ch_T0001704;gene_name=USP9YP18;ID=intron:NA12877_ch_T0001704:3;Name=USP9YP18;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24355520	24355740	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;alternative_source_transcripts=ENST00000425912.1,ENST00000425912.1;transcript_id=NA12877_ch_T0001704;gene_id=NA12877_ch_G0000592;Parent=NA12877_ch_T0001704;transcript_name=NA12877_ch_T0001704;gene_name=USP9YP18;ID=exon:NA12877_ch_T0001704:4;Name=USP9YP18;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24362297	24363310	.	+	.	source_gene_common_name=CDY14P;source_gene=ENSG00000226873.1;alternative_source_transcripts=ENST00000431260.1,ENST00000431260.1;gene_id=NA12877_ch_G0000593;gene_biotype=unprocessed_pseudogene;gene_name=CDY14P;gene_sources=liftoff;ID=NA12877_ch_G0000593;Name=CDY14P
NA12877_chrY	CAT	transcript	24362297	24363310	1000	+	.	source_transcript=ENST00000431260.1;source_transcript_name=CDY14P-201;source_gene=ENSG00000226873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431260.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY14P;alternative_source_transcripts=ENST00000431260.1,ENST00000431260.1;transcript_id=NA12877_ch_T0001705;gene_id=NA12877_ch_G0000593;Parent=NA12877_ch_G0000593;transcript_name=NA12877_ch_T0001705;gene_name=CDY14P;ID=NA12877_ch_T0001705;Name=CDY14P
NA12877_chrY	CAT	exon	24362297	24363310	.	+	.	source_transcript=ENST00000431260.1;source_transcript_name=CDY14P-201;source_gene=ENSG00000226873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY14P;alternative_source_transcripts=ENST00000431260.1,ENST00000431260.1;transcript_id=NA12877_ch_T0001705;gene_id=NA12877_ch_G0000593;Parent=NA12877_ch_T0001705;transcript_name=NA12877_ch_T0001705;gene_name=CDY14P;ID=exon:NA12877_ch_T0001705:0;Name=CDY14P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24366422	24366753	.	+	.	source_gene_common_name=ELOCP16;source_gene=ENSG00000227915.1;alternative_source_transcripts=ENST00000444494.1,ENST00000444494.1;gene_id=NA12877_ch_G0000594;gene_biotype=unprocessed_pseudogene;gene_name=ELOCP16;gene_sources=liftoff;ID=NA12877_ch_G0000594;Name=ELOCP16
NA12877_chrY	CAT	transcript	24366422	24366753	1000	+	.	source_transcript=ENST00000444494.1;source_transcript_name=ELOCP16-201;source_gene=ENSG00000227915.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227915.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444494.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444494.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP16;alternative_source_transcripts=ENST00000444494.1,ENST00000444494.1;transcript_id=NA12877_ch_T0001706;gene_id=NA12877_ch_G0000594;Parent=NA12877_ch_G0000594;transcript_name=NA12877_ch_T0001706;gene_name=ELOCP16;ID=NA12877_ch_T0001706;Name=ELOCP16
NA12877_chrY	CAT	exon	24366422	24366753	.	+	.	source_transcript=ENST00000444494.1;source_transcript_name=ELOCP16-201;source_gene=ENSG00000227915.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227915.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444494.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444494.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP16;alternative_source_transcripts=ENST00000444494.1,ENST00000444494.1;transcript_id=NA12877_ch_T0001706;gene_id=NA12877_ch_G0000594;Parent=NA12877_ch_T0001706;transcript_name=NA12877_ch_T0001706;gene_name=ELOCP16;ID=exon:NA12877_ch_T0001706:0;Name=ELOCP16;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24403840	24414726	.	-	.	source_gene_common_name=XKRYP3;source_gene=ENSG00000236620.1;alternative_source_transcripts=ENST00000442113.1,ENST00000442113.1;gene_id=NA12877_ch_G0000595;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP3;gene_sources=liftoff;ID=NA12877_ch_G0000595;Name=XKRYP3
NA12877_chrY	CAT	transcript	24403840	24414726	1000	-	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000442113.1,ENST00000442113.1;transcript_id=NA12877_ch_T0001707;gene_id=NA12877_ch_G0000595;Parent=NA12877_ch_G0000595;transcript_name=NA12877_ch_T0001707;gene_name=XKRYP3;ID=NA12877_ch_T0001707;Name=XKRYP3
NA12877_chrY	CAT	exon	24403840	24404619	.	-	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000442113.1,ENST00000442113.1;transcript_id=NA12877_ch_T0001707;gene_id=NA12877_ch_G0000595;Parent=NA12877_ch_T0001707;transcript_name=NA12877_ch_T0001707;gene_name=XKRYP3;ID=exon:NA12877_ch_T0001707:0;Name=XKRYP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24404620	24414390	.	-	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000442113.1,ENST00000442113.1;transcript_id=NA12877_ch_T0001707;gene_id=NA12877_ch_G0000595;Parent=NA12877_ch_T0001707;transcript_name=NA12877_ch_T0001707;gene_name=XKRYP3;ID=intron:NA12877_ch_T0001707:0;Name=XKRYP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24414391	24414726	.	-	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000442113.1,ENST00000442113.1;transcript_id=NA12877_ch_T0001707;gene_id=NA12877_ch_G0000595;Parent=NA12877_ch_T0001707;transcript_name=NA12877_ch_T0001707;gene_name=XKRYP3;ID=exon:NA12877_ch_T0001707:1;Name=XKRYP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24422111	24424167	.	+	.	source_gene_common_name=USP9YP25;source_gene=ENSG00000224866.1;alternative_source_transcripts=ENST00000457708.1,ENST00000457708.1;gene_id=NA12877_ch_G0000596;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP25;gene_sources=liftoff;ID=NA12877_ch_G0000596;Name=USP9YP25
NA12877_chrY	CAT	transcript	24422111	24424167	1000	+	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;alternative_source_transcripts=ENST00000457708.1,ENST00000457708.1;transcript_id=NA12877_ch_T0001708;gene_id=NA12877_ch_G0000596;Parent=NA12877_ch_G0000596;transcript_name=NA12877_ch_T0001708;gene_name=USP9YP25;ID=NA12877_ch_T0001708;Name=USP9YP25
NA12877_chrY	CAT	exon	24422111	24422361	.	+	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;alternative_source_transcripts=ENST00000457708.1,ENST00000457708.1;transcript_id=NA12877_ch_T0001708;gene_id=NA12877_ch_G0000596;Parent=NA12877_ch_T0001708;transcript_name=NA12877_ch_T0001708;gene_name=USP9YP25;ID=exon:NA12877_ch_T0001708:0;Name=USP9YP25;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24422362	24423975	.	+	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;alternative_source_transcripts=ENST00000457708.1,ENST00000457708.1;transcript_id=NA12877_ch_T0001708;gene_id=NA12877_ch_G0000596;Parent=NA12877_ch_T0001708;transcript_name=NA12877_ch_T0001708;gene_name=USP9YP25;ID=intron:NA12877_ch_T0001708:0;Name=USP9YP25;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24423976	24424167	.	+	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;alternative_source_transcripts=ENST00000457708.1,ENST00000457708.1;transcript_id=NA12877_ch_T0001708;gene_id=NA12877_ch_G0000596;Parent=NA12877_ch_T0001708;transcript_name=NA12877_ch_T0001708;gene_name=USP9YP25;ID=exon:NA12877_ch_T0001708:1;Name=USP9YP25;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24428180	24434616	.	-	.	source_gene_common_name=USP9YP29;source_gene=ENSG00000232424.1;gene_id=NA12877_ch_G0000597;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP29;gene_sources=liftoff;ID=NA12877_ch_G0000597;Name=USP9YP29
NA12877_chrY	CAT	transcript	24428180	24434616	1000	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=NA12877_ch_T0001709;gene_id=NA12877_ch_G0000597;Parent=NA12877_ch_G0000597;transcript_name=NA12877_ch_T0001709;gene_name=USP9YP29;ID=NA12877_ch_T0001709;Name=USP9YP29
NA12877_chrY	CAT	exon	24428180	24428275	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=NA12877_ch_T0001709;gene_id=NA12877_ch_G0000597;Parent=NA12877_ch_T0001709;transcript_name=NA12877_ch_T0001709;gene_name=USP9YP29;ID=exon:NA12877_ch_T0001709:0;Name=USP9YP29;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24428276	24428657	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=NA12877_ch_T0001709;gene_id=NA12877_ch_G0000597;Parent=NA12877_ch_T0001709;transcript_name=NA12877_ch_T0001709;gene_name=USP9YP29;ID=intron:NA12877_ch_T0001709:0;Name=USP9YP29;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24428658	24428816	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=NA12877_ch_T0001709;gene_id=NA12877_ch_G0000597;Parent=NA12877_ch_T0001709;transcript_name=NA12877_ch_T0001709;gene_name=USP9YP29;ID=exon:NA12877_ch_T0001709:1;Name=USP9YP29;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24428817	24429026	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=NA12877_ch_T0001709;gene_id=NA12877_ch_G0000597;Parent=NA12877_ch_T0001709;transcript_name=NA12877_ch_T0001709;gene_name=USP9YP29;ID=intron:NA12877_ch_T0001709:1;Name=USP9YP29;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24429027	24429056	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=NA12877_ch_T0001709;gene_id=NA12877_ch_G0000597;Parent=NA12877_ch_T0001709;transcript_name=NA12877_ch_T0001709;gene_name=USP9YP29;ID=exon:NA12877_ch_T0001709:2;Name=USP9YP29;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24429057	24429205	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=NA12877_ch_T0001709;gene_id=NA12877_ch_G0000597;Parent=NA12877_ch_T0001709;transcript_name=NA12877_ch_T0001709;gene_name=USP9YP29;ID=intron:NA12877_ch_T0001709:2;Name=USP9YP29;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24429206	24429355	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=NA12877_ch_T0001709;gene_id=NA12877_ch_G0000597;Parent=NA12877_ch_T0001709;transcript_name=NA12877_ch_T0001709;gene_name=USP9YP29;ID=exon:NA12877_ch_T0001709:3;Name=USP9YP29;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24429356	24434488	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=NA12877_ch_T0001709;gene_id=NA12877_ch_G0000597;Parent=NA12877_ch_T0001709;transcript_name=NA12877_ch_T0001709;gene_name=USP9YP29;ID=intron:NA12877_ch_T0001709:3;Name=USP9YP29;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24434489	24434616	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=NA12877_ch_T0001709;gene_id=NA12877_ch_G0000597;Parent=NA12877_ch_T0001709;transcript_name=NA12877_ch_T0001709;gene_name=USP9YP29;ID=exon:NA12877_ch_T0001709:4;Name=USP9YP29;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24428864	24429027	.	-	.	source_gene_common_name=RNU1-97P;source_gene=ENSG00000252681.1;gene_id=NA12877_ch_G0000598;gene_biotype=snRNA;gene_name=RNU1-97P;gene_sources=liftoff;ID=NA12877_ch_G0000598;Name=RNU1-97P
NA12877_chrY	CAT	transcript	24428864	24429027	1000	-	.	source_transcript=ENST00000516872.1;source_transcript_name=RNU1-97P-201;source_gene=ENSG00000252681.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252681.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516872.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516872.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-97P;transcript_id=NA12877_ch_T0001710;gene_id=NA12877_ch_G0000598;Parent=NA12877_ch_G0000598;transcript_name=NA12877_ch_T0001710;gene_name=RNU1-97P;ID=NA12877_ch_T0001710;Name=RNU1-97P
NA12877_chrY	CAT	exon	24428864	24429027	.	-	.	source_transcript=ENST00000516872.1;source_transcript_name=RNU1-97P-201;source_gene=ENSG00000252681.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252681.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516872.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516872.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-97P;transcript_id=NA12877_ch_T0001710;gene_id=NA12877_ch_G0000598;Parent=NA12877_ch_T0001710;transcript_name=NA12877_ch_T0001710;gene_name=RNU1-97P;ID=exon:NA12877_ch_T0001710:0;Name=RNU1-97P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24439111	24439683	.	+	.	source_gene_common_name=RAB9AP1;source_gene=ENSG00000232910.1;alternative_source_transcripts=ENST00000449393.1,ENST00000449393.1;gene_id=NA12877_ch_G0000599;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP1;gene_sources=liftoff;ID=NA12877_ch_G0000599;Name=RAB9AP1
NA12877_chrY	CAT	transcript	24439111	24439683	1000	+	.	source_transcript=ENST00000449393.1;source_transcript_name=RAB9AP1-201;source_gene=ENSG00000232910.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232910.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449393.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP1;alternative_source_transcripts=ENST00000449393.1,ENST00000449393.1;transcript_id=NA12877_ch_T0001711;gene_id=NA12877_ch_G0000599;Parent=NA12877_ch_G0000599;transcript_name=NA12877_ch_T0001711;gene_name=RAB9AP1;ID=NA12877_ch_T0001711;Name=RAB9AP1
NA12877_chrY	CAT	exon	24439111	24439683	.	+	.	source_transcript=ENST00000449393.1;source_transcript_name=RAB9AP1-201;source_gene=ENSG00000232910.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232910.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449393.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP1;alternative_source_transcripts=ENST00000449393.1,ENST00000449393.1;transcript_id=NA12877_ch_T0001711;gene_id=NA12877_ch_G0000599;Parent=NA12877_ch_T0001711;transcript_name=NA12877_ch_T0001711;gene_name=RAB9AP1;ID=exon:NA12877_ch_T0001711:0;Name=RAB9AP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24450761	24453506	.	-	.	source_gene_common_name=TRAPPC2P9;source_gene=ENSG00000232845.1;alternative_source_transcripts=ENST00000434556.1,ENST00000434556.1;gene_id=NA12877_ch_G0000600;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P9;gene_sources=liftoff;ID=NA12877_ch_G0000600;Name=TRAPPC2P9
NA12877_chrY	CAT	transcript	24450761	24453506	1000	-	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1,ENST00000434556.1;transcript_id=NA12877_ch_T0001712;gene_id=NA12877_ch_G0000600;Parent=NA12877_ch_G0000600;transcript_name=NA12877_ch_T0001712;gene_name=TRAPPC2P9;ID=NA12877_ch_T0001712;Name=TRAPPC2P9
NA12877_chrY	CAT	exon	24450761	24450846	.	-	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1,ENST00000434556.1;transcript_id=NA12877_ch_T0001712;gene_id=NA12877_ch_G0000600;Parent=NA12877_ch_T0001712;transcript_name=NA12877_ch_T0001712;gene_name=TRAPPC2P9;ID=exon:NA12877_ch_T0001712:0;Name=TRAPPC2P9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24450847	24451295	.	-	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1,ENST00000434556.1;transcript_id=NA12877_ch_T0001712;gene_id=NA12877_ch_G0000600;Parent=NA12877_ch_T0001712;transcript_name=NA12877_ch_T0001712;gene_name=TRAPPC2P9;ID=intron:NA12877_ch_T0001712:0;Name=TRAPPC2P9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24451296	24451440	.	-	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1,ENST00000434556.1;transcript_id=NA12877_ch_T0001712;gene_id=NA12877_ch_G0000600;Parent=NA12877_ch_T0001712;transcript_name=NA12877_ch_T0001712;gene_name=TRAPPC2P9;ID=exon:NA12877_ch_T0001712:1;Name=TRAPPC2P9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24451441	24453394	.	-	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1,ENST00000434556.1;transcript_id=NA12877_ch_T0001712;gene_id=NA12877_ch_G0000600;Parent=NA12877_ch_T0001712;transcript_name=NA12877_ch_T0001712;gene_name=TRAPPC2P9;ID=intron:NA12877_ch_T0001712:1;Name=TRAPPC2P9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24453395	24453506	.	-	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1,ENST00000434556.1;transcript_id=NA12877_ch_T0001712;gene_id=NA12877_ch_G0000600;Parent=NA12877_ch_T0001712;transcript_name=NA12877_ch_T0001712;gene_name=TRAPPC2P9;ID=exon:NA12877_ch_T0001712:2;Name=TRAPPC2P9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24459155	24486073	.	+	.	source_gene_common_name=OFD1P11Y;source_gene=ENSG00000237302.1;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;gene_id=NA12877_ch_G0000601;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P11Y;gene_sources=liftoff;ID=NA12877_ch_G0000601;Name=OFD1P11Y
NA12877_chrY	CAT	transcript	24459155	24486073	1000	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_G0000601;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=NA12877_ch_T0001713;Name=OFD1P11Y
NA12877_chrY	CAT	exon	24459155	24459252	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=exon:NA12877_ch_T0001713:0;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24459253	24460670	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=intron:NA12877_ch_T0001713:0;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24460671	24460872	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=exon:NA12877_ch_T0001713:1;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24460873	24471562	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=intron:NA12877_ch_T0001713:1;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24471563	24471631	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=exon:NA12877_ch_T0001713:2;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24471632	24471715	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=intron:NA12877_ch_T0001713:2;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24471716	24471746	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=exon:NA12877_ch_T0001713:3;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24471747	24472536	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=intron:NA12877_ch_T0001713:3;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24472537	24472660	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=exon:NA12877_ch_T0001713:4;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24472661	24476494	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=intron:NA12877_ch_T0001713:4;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24476495	24476629	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=exon:NA12877_ch_T0001713:5;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24476630	24476973	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=intron:NA12877_ch_T0001713:5;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24476974	24477119	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=exon:NA12877_ch_T0001713:6;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24477120	24480165	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=intron:NA12877_ch_T0001713:6;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24480166	24480272	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=exon:NA12877_ch_T0001713:7;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24480273	24482920	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=intron:NA12877_ch_T0001713:7;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24482921	24483039	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=exon:NA12877_ch_T0001713:8;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24483040	24484825	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=intron:NA12877_ch_T0001713:8;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24484826	24484899	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=exon:NA12877_ch_T0001713:9;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24484900	24486001	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=intron:NA12877_ch_T0001713:9;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24486002	24486073	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;alternative_source_transcripts=ENST00000418213.1,ENST00000418213.1;transcript_id=NA12877_ch_T0001713;gene_id=NA12877_ch_G0000601;Parent=NA12877_ch_T0001713;transcript_name=NA12877_ch_T0001713;gene_name=OFD1P11Y;ID=exon:NA12877_ch_T0001713:10;Name=OFD1P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24496748	24496986	.	-	.	source_gene_common_name=ELOCP9;source_gene=ENSG00000231540.1;alternative_source_transcripts=ENST00000418624.1,ENST00000418624.1;gene_id=NA12877_ch_G0000602;gene_biotype=processed_pseudogene;gene_name=ELOCP9;gene_sources=liftoff;ID=NA12877_ch_G0000602;Name=ELOCP9
NA12877_chrY	CAT	transcript	24496748	24496986	1000	-	.	source_transcript=ENST00000418624.1;source_transcript_name=ELOCP9-201;source_gene=ENSG00000231540.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231540.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418624.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP9;alternative_source_transcripts=ENST00000418624.1,ENST00000418624.1;transcript_id=NA12877_ch_T0001714;gene_id=NA12877_ch_G0000602;Parent=NA12877_ch_G0000602;transcript_name=NA12877_ch_T0001714;gene_name=ELOCP9;ID=NA12877_ch_T0001714;Name=ELOCP9
NA12877_chrY	CAT	exon	24496748	24496986	.	-	.	source_transcript=ENST00000418624.1;source_transcript_name=ELOCP9-201;source_gene=ENSG00000231540.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231540.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418624.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP9;alternative_source_transcripts=ENST00000418624.1,ENST00000418624.1;transcript_id=NA12877_ch_T0001714;gene_id=NA12877_ch_G0000602;Parent=NA12877_ch_T0001714;transcript_name=NA12877_ch_T0001714;gene_name=ELOCP9;ID=exon:NA12877_ch_T0001714:0;Name=ELOCP9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24543449	24545018	.	-	.	source_gene_common_name=CDY15P;source_gene=ENSG00000223362.1;alternative_source_transcripts=ENST00000421995.1,ENST00000421995.1;gene_id=NA12877_ch_G0000603;gene_biotype=unprocessed_pseudogene;gene_name=CDY15P;gene_sources=liftoff;ID=NA12877_ch_G0000603;Name=CDY15P
NA12877_chrY	CAT	transcript	24543449	24545018	1000	-	.	source_transcript=ENST00000421995.1;source_transcript_name=CDY15P-201;source_gene=ENSG00000223362.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223362.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421995.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY15P;alternative_source_transcripts=ENST00000421995.1,ENST00000421995.1;transcript_id=NA12877_ch_T0001715;gene_id=NA12877_ch_G0000603;Parent=NA12877_ch_G0000603;transcript_name=NA12877_ch_T0001715;gene_name=CDY15P;ID=NA12877_ch_T0001715;Name=CDY15P
NA12877_chrY	CAT	exon	24543449	24545018	.	-	.	source_transcript=ENST00000421995.1;source_transcript_name=CDY15P-201;source_gene=ENSG00000223362.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223362.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421995.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY15P;alternative_source_transcripts=ENST00000421995.1,ENST00000421995.1;transcript_id=NA12877_ch_T0001715;gene_id=NA12877_ch_G0000603;Parent=NA12877_ch_T0001715;transcript_name=NA12877_ch_T0001715;gene_name=CDY15P;ID=exon:NA12877_ch_T0001715:0;Name=CDY15P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24605171	24605653	.	-	.	source_gene_common_name=XKRYP4;source_gene=ENSG00000231026.1;alternative_source_transcripts=ENST00000414395.1,ENST00000414395.1;gene_id=NA12877_ch_G0000604;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP4;gene_sources=liftoff;ID=NA12877_ch_G0000604;Name=XKRYP4
NA12877_chrY	CAT	transcript	24605171	24605653	1000	-	.	source_transcript=ENST00000414395.1;source_transcript_name=XKRYP4-201;source_gene=ENSG00000231026.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231026.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414395.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414395.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP4;alternative_source_transcripts=ENST00000414395.1,ENST00000414395.1;transcript_id=NA12877_ch_T0001716;gene_id=NA12877_ch_G0000604;Parent=NA12877_ch_G0000604;transcript_name=NA12877_ch_T0001716;gene_name=XKRYP4;ID=NA12877_ch_T0001716;Name=XKRYP4
NA12877_chrY	CAT	exon	24605171	24605653	.	-	.	source_transcript=ENST00000414395.1;source_transcript_name=XKRYP4-201;source_gene=ENSG00000231026.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231026.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414395.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414395.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP4;alternative_source_transcripts=ENST00000414395.1,ENST00000414395.1;transcript_id=NA12877_ch_T0001716;gene_id=NA12877_ch_G0000604;Parent=NA12877_ch_T0001716;transcript_name=NA12877_ch_T0001716;gene_name=XKRYP4;ID=exon:NA12877_ch_T0001716:0;Name=XKRYP4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24607835	24609440	.	+	.	source_gene_common_name=USP9YP13;source_gene=ENSG00000224571.1;alternative_source_transcripts=ENST00000417797.1,ENST00000417797.1;gene_id=NA12877_ch_G0000605;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP13;gene_sources=liftoff;ID=NA12877_ch_G0000605;Name=USP9YP13
NA12877_chrY	CAT	transcript	24607835	24609440	1000	+	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;alternative_source_transcripts=ENST00000417797.1,ENST00000417797.1;transcript_id=NA12877_ch_T0001717;gene_id=NA12877_ch_G0000605;Parent=NA12877_ch_G0000605;transcript_name=NA12877_ch_T0001717;gene_name=USP9YP13;ID=NA12877_ch_T0001717;Name=USP9YP13
NA12877_chrY	CAT	exon	24607835	24608054	.	+	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;alternative_source_transcripts=ENST00000417797.1,ENST00000417797.1;transcript_id=NA12877_ch_T0001717;gene_id=NA12877_ch_G0000605;Parent=NA12877_ch_T0001717;transcript_name=NA12877_ch_T0001717;gene_name=USP9YP13;ID=exon:NA12877_ch_T0001717:0;Name=USP9YP13;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24608055	24609180	.	+	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;alternative_source_transcripts=ENST00000417797.1,ENST00000417797.1;transcript_id=NA12877_ch_T0001717;gene_id=NA12877_ch_G0000605;Parent=NA12877_ch_T0001717;transcript_name=NA12877_ch_T0001717;gene_name=USP9YP13;ID=intron:NA12877_ch_T0001717:0;Name=USP9YP13;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24609181	24609440	.	+	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;alternative_source_transcripts=ENST00000417797.1,ENST00000417797.1;transcript_id=NA12877_ch_T0001717;gene_id=NA12877_ch_G0000605;Parent=NA12877_ch_T0001717;transcript_name=NA12877_ch_T0001717;gene_name=USP9YP13;ID=exon:NA12877_ch_T0001717:1;Name=USP9YP13;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24622883	24628031	.	+	.	source_gene_common_name=USP9YP11;source_gene=ENSG00000226369.1;alternative_source_transcripts=ENST00000427537.1,ENST00000427537.1;gene_id=NA12877_ch_G0000606;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP11;gene_sources=liftoff;ID=NA12877_ch_G0000606;Name=USP9YP11
NA12877_chrY	CAT	transcript	24622883	24628031	1000	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1,ENST00000427537.1;transcript_id=NA12877_ch_T0001718;gene_id=NA12877_ch_G0000606;Parent=NA12877_ch_G0000606;transcript_name=NA12877_ch_T0001718;gene_name=USP9YP11;ID=NA12877_ch_T0001718;Name=USP9YP11
NA12877_chrY	CAT	exon	24622883	24622921	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1,ENST00000427537.1;transcript_id=NA12877_ch_T0001718;gene_id=NA12877_ch_G0000606;Parent=NA12877_ch_T0001718;transcript_name=NA12877_ch_T0001718;gene_name=USP9YP11;ID=exon:NA12877_ch_T0001718:0;Name=USP9YP11;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24622922	24624595	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1,ENST00000427537.1;transcript_id=NA12877_ch_T0001718;gene_id=NA12877_ch_G0000606;Parent=NA12877_ch_T0001718;transcript_name=NA12877_ch_T0001718;gene_name=USP9YP11;ID=intron:NA12877_ch_T0001718:0;Name=USP9YP11;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24624596	24624819	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1,ENST00000427537.1;transcript_id=NA12877_ch_T0001718;gene_id=NA12877_ch_G0000606;Parent=NA12877_ch_T0001718;transcript_name=NA12877_ch_T0001718;gene_name=USP9YP11;ID=exon:NA12877_ch_T0001718:1;Name=USP9YP11;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24624820	24625942	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1,ENST00000427537.1;transcript_id=NA12877_ch_T0001718;gene_id=NA12877_ch_G0000606;Parent=NA12877_ch_T0001718;transcript_name=NA12877_ch_T0001718;gene_name=USP9YP11;ID=intron:NA12877_ch_T0001718:1;Name=USP9YP11;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24625943	24626205	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1,ENST00000427537.1;transcript_id=NA12877_ch_T0001718;gene_id=NA12877_ch_G0000606;Parent=NA12877_ch_T0001718;transcript_name=NA12877_ch_T0001718;gene_name=USP9YP11;ID=exon:NA12877_ch_T0001718:2;Name=USP9YP11;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24626206	24627840	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1,ENST00000427537.1;transcript_id=NA12877_ch_T0001718;gene_id=NA12877_ch_G0000606;Parent=NA12877_ch_T0001718;transcript_name=NA12877_ch_T0001718;gene_name=USP9YP11;ID=intron:NA12877_ch_T0001718:2;Name=USP9YP11;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24627841	24628031	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1,ENST00000427537.1;transcript_id=NA12877_ch_T0001718;gene_id=NA12877_ch_G0000606;Parent=NA12877_ch_T0001718;transcript_name=NA12877_ch_T0001718;gene_name=USP9YP11;ID=exon:NA12877_ch_T0001718:3;Name=USP9YP11;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24624657	24629552	.	-	.	source_gene_common_name=TTTY3B;source_gene=ENSG00000280961.1;alternative_source_transcripts=ENST00000631331.1,ENST00000631331.1;gene_id=NA12877_ch_G0000607;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=NA12877_ch_G0000607;Name=TTTY3B
NA12877_chrY	CAT	transcript	24624657	24629552	1000	-	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1,ENST00000631331.1;transcript_id=NA12877_ch_T0001719;gene_id=NA12877_ch_G0000607;Parent=NA12877_ch_G0000607;transcript_name=NA12877_ch_T0001719;gene_name=TTTY3B;ID=NA12877_ch_T0001719;Name=TTTY3B
NA12877_chrY	CAT	exon	24624657	24624761	.	-	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1,ENST00000631331.1;transcript_id=NA12877_ch_T0001719;gene_id=NA12877_ch_G0000607;Parent=NA12877_ch_T0001719;transcript_name=NA12877_ch_T0001719;gene_name=TTTY3B;ID=exon:NA12877_ch_T0001719:0;Name=TTTY3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24624762	24627115	.	-	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1,ENST00000631331.1;transcript_id=NA12877_ch_T0001719;gene_id=NA12877_ch_G0000607;Parent=NA12877_ch_T0001719;transcript_name=NA12877_ch_T0001719;gene_name=TTTY3B;ID=intron:NA12877_ch_T0001719:0;Name=TTTY3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24627116	24627250	.	-	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1,ENST00000631331.1;transcript_id=NA12877_ch_T0001719;gene_id=NA12877_ch_G0000607;Parent=NA12877_ch_T0001719;transcript_name=NA12877_ch_T0001719;gene_name=TTTY3B;ID=exon:NA12877_ch_T0001719:1;Name=TTTY3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24627251	24629448	.	-	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1,ENST00000631331.1;transcript_id=NA12877_ch_T0001719;gene_id=NA12877_ch_G0000607;Parent=NA12877_ch_T0001719;transcript_name=NA12877_ch_T0001719;gene_name=TTTY3B;ID=intron:NA12877_ch_T0001719:1;Name=TTTY3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24629449	24629552	.	-	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1,ENST00000631331.1;transcript_id=NA12877_ch_T0001719;gene_id=NA12877_ch_G0000607;Parent=NA12877_ch_T0001719;transcript_name=NA12877_ch_T0001719;gene_name=TTTY3B;ID=exon:NA12877_ch_T0001719:2;Name=TTTY3B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24633857	24640223	.	-	.	source_gene_common_name=USP9YP12;source_gene=ENSG00000227871.1;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;gene_id=NA12877_ch_G0000608;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP12;gene_sources=liftoff;ID=NA12877_ch_G0000608;Name=USP9YP12
NA12877_chrY	CAT	transcript	24633857	24640223	1000	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=NA12877_ch_T0001720;gene_id=NA12877_ch_G0000608;Parent=NA12877_ch_G0000608;transcript_name=NA12877_ch_T0001720;gene_name=USP9YP12;ID=NA12877_ch_T0001720;Name=USP9YP12
NA12877_chrY	CAT	exon	24633857	24633952	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=NA12877_ch_T0001720;gene_id=NA12877_ch_G0000608;Parent=NA12877_ch_T0001720;transcript_name=NA12877_ch_T0001720;gene_name=USP9YP12;ID=exon:NA12877_ch_T0001720:0;Name=USP9YP12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24633953	24634333	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=NA12877_ch_T0001720;gene_id=NA12877_ch_G0000608;Parent=NA12877_ch_T0001720;transcript_name=NA12877_ch_T0001720;gene_name=USP9YP12;ID=intron:NA12877_ch_T0001720:0;Name=USP9YP12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24634334	24634521	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=NA12877_ch_T0001720;gene_id=NA12877_ch_G0000608;Parent=NA12877_ch_T0001720;transcript_name=NA12877_ch_T0001720;gene_name=USP9YP12;ID=exon:NA12877_ch_T0001720:1;Name=USP9YP12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24634522	24634876	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=NA12877_ch_T0001720;gene_id=NA12877_ch_G0000608;Parent=NA12877_ch_T0001720;transcript_name=NA12877_ch_T0001720;gene_name=USP9YP12;ID=intron:NA12877_ch_T0001720:1;Name=USP9YP12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24634877	24635030	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=NA12877_ch_T0001720;gene_id=NA12877_ch_G0000608;Parent=NA12877_ch_T0001720;transcript_name=NA12877_ch_T0001720;gene_name=USP9YP12;ID=exon:NA12877_ch_T0001720:2;Name=USP9YP12;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24635031	24640091	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=NA12877_ch_T0001720;gene_id=NA12877_ch_G0000608;Parent=NA12877_ch_T0001720;transcript_name=NA12877_ch_T0001720;gene_name=USP9YP12;ID=intron:NA12877_ch_T0001720:2;Name=USP9YP12;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24640092	24640223	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=NA12877_ch_T0001720;gene_id=NA12877_ch_G0000608;Parent=NA12877_ch_T0001720;transcript_name=NA12877_ch_T0001720;gene_name=USP9YP12;ID=exon:NA12877_ch_T0001720:3;Name=USP9YP12;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24634548	24634701	.	-	.	source_gene_common_name=RNU1-86P;source_gene=ENSG00000251917.1;alternative_source_transcripts=ENST00000516108.1,ENST00000516108.1;gene_id=NA12877_ch_G0000609;gene_biotype=snRNA;gene_name=RNU1-86P;gene_sources=liftoff;ID=NA12877_ch_G0000609;Name=RNU1-86P
NA12877_chrY	CAT	transcript	24634548	24634701	1000	-	.	source_transcript=ENST00000516108.1;source_transcript_name=RNU1-86P-201;source_gene=ENSG00000251917.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251917.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516108.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516108.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-86P;alternative_source_transcripts=ENST00000516108.1,ENST00000516108.1;transcript_id=NA12877_ch_T0001721;gene_id=NA12877_ch_G0000609;Parent=NA12877_ch_G0000609;transcript_name=NA12877_ch_T0001721;gene_name=RNU1-86P;ID=NA12877_ch_T0001721;Name=RNU1-86P
NA12877_chrY	CAT	exon	24634548	24634701	.	-	.	source_transcript=ENST00000516108.1;source_transcript_name=RNU1-86P-201;source_gene=ENSG00000251917.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251917.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516108.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516108.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-86P;alternative_source_transcripts=ENST00000516108.1,ENST00000516108.1;transcript_id=NA12877_ch_T0001721;gene_id=NA12877_ch_G0000609;Parent=NA12877_ch_T0001721;transcript_name=NA12877_ch_T0001721;gene_name=RNU1-86P;ID=exon:NA12877_ch_T0001721:0;Name=RNU1-86P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24644495	24648144	.	+	.	source_gene_common_name=RAB9AP5;source_gene=ENSG00000231423.1;alternative_source_transcripts=ENST00000437794.1,ENST00000437794.1;gene_id=NA12877_ch_G0000610;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP5;gene_sources=liftoff;ID=NA12877_ch_G0000610;Name=RAB9AP5
NA12877_chrY	CAT	transcript	24644495	24648144	1000	+	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;alternative_source_transcripts=ENST00000437794.1,ENST00000437794.1;transcript_id=NA12877_ch_T0001722;gene_id=NA12877_ch_G0000610;Parent=NA12877_ch_G0000610;transcript_name=NA12877_ch_T0001722;gene_name=RAB9AP5;ID=NA12877_ch_T0001722;Name=RAB9AP5
NA12877_chrY	CAT	exon	24644495	24644722	.	+	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;alternative_source_transcripts=ENST00000437794.1,ENST00000437794.1;transcript_id=NA12877_ch_T0001722;gene_id=NA12877_ch_G0000610;Parent=NA12877_ch_T0001722;transcript_name=NA12877_ch_T0001722;gene_name=RAB9AP5;ID=exon:NA12877_ch_T0001722:0;Name=RAB9AP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24644723	24647775	.	+	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;alternative_source_transcripts=ENST00000437794.1,ENST00000437794.1;transcript_id=NA12877_ch_T0001722;gene_id=NA12877_ch_G0000610;Parent=NA12877_ch_T0001722;transcript_name=NA12877_ch_T0001722;gene_name=RAB9AP5;ID=intron:NA12877_ch_T0001722:0;Name=RAB9AP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24647776	24648144	.	+	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;alternative_source_transcripts=ENST00000437794.1,ENST00000437794.1;transcript_id=NA12877_ch_T0001722;gene_id=NA12877_ch_G0000610;Parent=NA12877_ch_T0001722;transcript_name=NA12877_ch_T0001722;gene_name=RAB9AP5;ID=exon:NA12877_ch_T0001722:1;Name=RAB9AP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24655490	24658620	.	-	.	source_gene_common_name=TRAPPC2P10;source_gene=ENSG00000228465.1;alternative_source_transcripts=ENST00000415662.1,ENST00000415662.1;gene_id=NA12877_ch_G0000611;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P10;gene_sources=liftoff;ID=NA12877_ch_G0000611;Name=TRAPPC2P10
NA12877_chrY	CAT	transcript	24655490	24658620	1000	-	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1,ENST00000415662.1;transcript_id=NA12877_ch_T0001723;gene_id=NA12877_ch_G0000611;Parent=NA12877_ch_G0000611;transcript_name=NA12877_ch_T0001723;gene_name=TRAPPC2P10;ID=NA12877_ch_T0001723;Name=TRAPPC2P10
NA12877_chrY	CAT	exon	24655490	24655568	.	-	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1,ENST00000415662.1;transcript_id=NA12877_ch_T0001723;gene_id=NA12877_ch_G0000611;Parent=NA12877_ch_T0001723;transcript_name=NA12877_ch_T0001723;gene_name=TRAPPC2P10;ID=exon:NA12877_ch_T0001723:0;Name=TRAPPC2P10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24655569	24656012	.	-	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1,ENST00000415662.1;transcript_id=NA12877_ch_T0001723;gene_id=NA12877_ch_G0000611;Parent=NA12877_ch_T0001723;transcript_name=NA12877_ch_T0001723;gene_name=TRAPPC2P10;ID=intron:NA12877_ch_T0001723:0;Name=TRAPPC2P10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24656013	24656144	.	-	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1,ENST00000415662.1;transcript_id=NA12877_ch_T0001723;gene_id=NA12877_ch_G0000611;Parent=NA12877_ch_T0001723;transcript_name=NA12877_ch_T0001723;gene_name=TRAPPC2P10;ID=exon:NA12877_ch_T0001723:1;Name=TRAPPC2P10;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24656145	24658508	.	-	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1,ENST00000415662.1;transcript_id=NA12877_ch_T0001723;gene_id=NA12877_ch_G0000611;Parent=NA12877_ch_T0001723;transcript_name=NA12877_ch_T0001723;gene_name=TRAPPC2P10;ID=intron:NA12877_ch_T0001723:1;Name=TRAPPC2P10;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24658509	24658620	.	-	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1,ENST00000415662.1;transcript_id=NA12877_ch_T0001723;gene_id=NA12877_ch_G0000611;Parent=NA12877_ch_T0001723;transcript_name=NA12877_ch_T0001723;gene_name=TRAPPC2P10;ID=exon:NA12877_ch_T0001723:2;Name=TRAPPC2P10;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24660706	24683008	.	+	.	source_gene_common_name=OFD1P12Y;source_gene=ENSG00000232585.1;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;gene_id=NA12877_ch_G0000612;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P12Y;gene_sources=liftoff;ID=NA12877_ch_G0000612;Name=OFD1P12Y
NA12877_chrY	CAT	transcript	24660706	24683008	1000	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_G0000612;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=NA12877_ch_T0001724;Name=OFD1P12Y
NA12877_chrY	CAT	exon	24660706	24660804	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=exon:NA12877_ch_T0001724:0;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24660805	24662119	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=intron:NA12877_ch_T0001724:0;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24662120	24662319	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=exon:NA12877_ch_T0001724:1;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24662320	24664526	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=intron:NA12877_ch_T0001724:1;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24664527	24664594	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=exon:NA12877_ch_T0001724:2;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24664595	24664679	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=intron:NA12877_ch_T0001724:2;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24664680	24664712	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=exon:NA12877_ch_T0001724:3;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24664713	24672218	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=intron:NA12877_ch_T0001724:3;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24672219	24672352	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=exon:NA12877_ch_T0001724:4;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24672353	24672690	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=intron:NA12877_ch_T0001724:4;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24672691	24672826	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=exon:NA12877_ch_T0001724:5;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24672827	24675870	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=intron:NA12877_ch_T0001724:5;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24675871	24675979	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=exon:NA12877_ch_T0001724:6;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24675980	24678085	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=intron:NA12877_ch_T0001724:6;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24678086	24678198	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=exon:NA12877_ch_T0001724:7;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24678199	24679974	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=intron:NA12877_ch_T0001724:7;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24679975	24680048	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=exon:NA12877_ch_T0001724:8;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24680049	24681152	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=intron:NA12877_ch_T0001724:8;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24681153	24681244	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=exon:NA12877_ch_T0001724:9;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24681245	24682859	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=intron:NA12877_ch_T0001724:9;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24682860	24683008	.	+	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;alternative_source_transcripts=ENST00000427963.1,ENST00000427963.1;transcript_id=NA12877_ch_T0001724;gene_id=NA12877_ch_G0000612;Parent=NA12877_ch_T0001724;transcript_name=NA12877_ch_T0001724;gene_name=OFD1P12Y;ID=exon:NA12877_ch_T0001724:10;Name=OFD1P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24694832	24695158	.	-	.	source_gene_common_name=ELOCP10;source_gene=ENSG00000234081.1;alternative_source_transcripts=ENST00000440624.1,ENST00000440624.1;gene_id=NA12877_ch_G0000613;gene_biotype=processed_pseudogene;gene_name=ELOCP10;gene_sources=liftoff;ID=NA12877_ch_G0000613;Name=ELOCP10
NA12877_chrY	CAT	transcript	24694832	24695158	1000	-	.	source_transcript=ENST00000440624.1;source_transcript_name=ELOCP10-201;source_gene=ENSG00000234081.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234081.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440624.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP10;alternative_source_transcripts=ENST00000440624.1,ENST00000440624.1;transcript_id=NA12877_ch_T0001725;gene_id=NA12877_ch_G0000613;Parent=NA12877_ch_G0000613;transcript_name=NA12877_ch_T0001725;gene_name=ELOCP10;ID=NA12877_ch_T0001725;Name=ELOCP10
NA12877_chrY	CAT	exon	24694832	24695158	.	-	.	source_transcript=ENST00000440624.1;source_transcript_name=ELOCP10-201;source_gene=ENSG00000234081.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234081.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440624.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP10;alternative_source_transcripts=ENST00000440624.1,ENST00000440624.1;transcript_id=NA12877_ch_T0001725;gene_id=NA12877_ch_G0000613;Parent=NA12877_ch_T0001725;transcript_name=NA12877_ch_T0001725;gene_name=ELOCP10;ID=exon:NA12877_ch_T0001725:0;Name=ELOCP10;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24733159	24735899	.	-	.	source_gene_common_name=CDY1B;source_gene=ENSG00000172352.5;alternative_source_transcripts=ENST00000306882.4,ENST00000306882.4;gene_id=NA12877_ch_G0000614;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=liftoff;ID=NA12877_ch_G0000614;Name=CDY1B
NA12877_chrY	CAT	transcript	24733159	24735899	100	-	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4,ENST00000306882.4;transcript_id=NA12877_ch_T0001726;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_G0000614;transcript_name=NA12877_ch_T0001726;gene_name=CDY1B;ID=NA12877_ch_T0001726;Name=CDY1B
NA12877_chrY	CAT	exon	24733159	24733606	.	-	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4,ENST00000306882.4;transcript_id=NA12877_ch_T0001726;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_T0001726;transcript_name=NA12877_ch_T0001726;gene_name=CDY1B;ID=exon:NA12877_ch_T0001726:0;Name=CDY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	24733534	24733606	.	-	1	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4,ENST00000306882.4;transcript_id=NA12877_ch_T0001726;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_T0001726;transcript_name=NA12877_ch_T0001726;gene_name=CDY1B;ID=CDS:NA12877_ch_T0001726:0;Name=CDY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	24733534	24733536	.	-	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4,ENST00000306882.4;transcript_id=NA12877_ch_T0001726;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_T0001726;transcript_name=NA12877_ch_T0001726;gene_name=CDY1B;ID=stop_codon:NA12877_ch_T0001726;Name=CDY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24733607	24734026	.	-	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4,ENST00000306882.4;transcript_id=NA12877_ch_T0001726;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_T0001726;transcript_name=NA12877_ch_T0001726;gene_name=CDY1B;ID=intron:NA12877_ch_T0001726:0;Name=CDY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24734027	24735899	.	-	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4,ENST00000306882.4;transcript_id=NA12877_ch_T0001726;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_T0001726;transcript_name=NA12877_ch_T0001726;gene_name=CDY1B;ID=exon:NA12877_ch_T0001726:1;Name=CDY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	24734027	24735618	.	-	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4,ENST00000306882.4;transcript_id=NA12877_ch_T0001726;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_T0001726;transcript_name=NA12877_ch_T0001726;gene_name=CDY1B;ID=CDS:NA12877_ch_T0001726:1;Name=CDY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	24735616	24735618	.	-	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4,ENST00000306882.4;transcript_id=NA12877_ch_T0001726;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_T0001726;transcript_name=NA12877_ch_T0001726;gene_name=CDY1B;ID=start_codon:NA12877_ch_T0001726;Name=CDY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24733723	24735949	100	-	.	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1,ENST00000382407.1;transcript_id=NA12877_ch_T0001727;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_G0000614;transcript_name=NA12877_ch_T0001727;gene_name=CDY1B;ID=NA12877_ch_T0001727;Name=CDY1B
NA12877_chrY	CAT	exon	24733723	24735949	.	-	.	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1,ENST00000382407.1;transcript_id=NA12877_ch_T0001727;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_T0001727;transcript_name=NA12877_ch_T0001727;gene_name=CDY1B;ID=exon:NA12877_ch_T0001727:0;Name=CDY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	24733996	24735618	.	-	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1,ENST00000382407.1;transcript_id=NA12877_ch_T0001727;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_T0001727;transcript_name=NA12877_ch_T0001727;gene_name=CDY1B;ID=CDS:NA12877_ch_T0001727:0;Name=CDY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	24733996	24733998	.	-	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1,ENST00000382407.1;transcript_id=NA12877_ch_T0001727;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_T0001727;transcript_name=NA12877_ch_T0001727;gene_name=CDY1B;ID=stop_codon:NA12877_ch_T0001727;Name=CDY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	24735616	24735618	.	-	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1,ENST00000382407.1;transcript_id=NA12877_ch_T0001727;gene_id=NA12877_ch_G0000614;Parent=NA12877_ch_T0001727;transcript_name=NA12877_ch_T0001727;gene_name=CDY1B;ID=start_codon:NA12877_ch_T0001727;Name=CDY1B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24737808	24739417	.	-	.	source_gene_common_name=CDY17P;source_gene=ENSG00000231375.1;alternative_source_transcripts=ENST00000414121.1,ENST00000414121.1;gene_id=NA12877_ch_G0000615;gene_biotype=unprocessed_pseudogene;gene_name=CDY17P;gene_sources=liftoff;ID=NA12877_ch_G0000615;Name=CDY17P
NA12877_chrY	CAT	transcript	24737808	24739417	1000	-	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;alternative_source_transcripts=ENST00000414121.1,ENST00000414121.1;transcript_id=NA12877_ch_T0001728;gene_id=NA12877_ch_G0000615;Parent=NA12877_ch_G0000615;transcript_name=NA12877_ch_T0001728;gene_name=CDY17P;ID=NA12877_ch_T0001728;Name=CDY17P
NA12877_chrY	CAT	exon	24737808	24739023	.	-	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;alternative_source_transcripts=ENST00000414121.1,ENST00000414121.1;transcript_id=NA12877_ch_T0001728;gene_id=NA12877_ch_G0000615;Parent=NA12877_ch_T0001728;transcript_name=NA12877_ch_T0001728;gene_name=CDY17P;ID=exon:NA12877_ch_T0001728:0;Name=CDY17P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24739024	24739351	.	-	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;alternative_source_transcripts=ENST00000414121.1,ENST00000414121.1;transcript_id=NA12877_ch_T0001728;gene_id=NA12877_ch_G0000615;Parent=NA12877_ch_T0001728;transcript_name=NA12877_ch_T0001728;gene_name=CDY17P;ID=intron:NA12877_ch_T0001728:0;Name=CDY17P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24739352	24739417	.	-	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;alternative_source_transcripts=ENST00000414121.1,ENST00000414121.1;transcript_id=NA12877_ch_T0001728;gene_id=NA12877_ch_G0000615;Parent=NA12877_ch_T0001728;transcript_name=NA12877_ch_T0001728;gene_name=CDY17P;ID=exon:NA12877_ch_T0001728:1;Name=CDY17P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24765729	24767742	.	+	.	source_gene_common_name=USP9YP35;source_gene=ENSG00000237467.1;alternative_source_transcripts=ENST00000435696.1,ENST00000435696.1;gene_id=NA12877_ch_G0000616;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP35;gene_sources=liftoff;ID=NA12877_ch_G0000616;Name=USP9YP35
NA12877_chrY	CAT	transcript	24765729	24767742	1000	+	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;alternative_source_transcripts=ENST00000435696.1,ENST00000435696.1;transcript_id=NA12877_ch_T0001729;gene_id=NA12877_ch_G0000616;Parent=NA12877_ch_G0000616;transcript_name=NA12877_ch_T0001729;gene_name=USP9YP35;ID=NA12877_ch_T0001729;Name=USP9YP35
NA12877_chrY	CAT	exon	24765729	24765950	.	+	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;alternative_source_transcripts=ENST00000435696.1,ENST00000435696.1;transcript_id=NA12877_ch_T0001729;gene_id=NA12877_ch_G0000616;Parent=NA12877_ch_T0001729;transcript_name=NA12877_ch_T0001729;gene_name=USP9YP35;ID=exon:NA12877_ch_T0001729:0;Name=USP9YP35;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24765951	24767552	.	+	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;alternative_source_transcripts=ENST00000435696.1,ENST00000435696.1;transcript_id=NA12877_ch_T0001729;gene_id=NA12877_ch_G0000616;Parent=NA12877_ch_T0001729;transcript_name=NA12877_ch_T0001729;gene_name=USP9YP35;ID=intron:NA12877_ch_T0001729:0;Name=USP9YP35;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24767553	24767742	.	+	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;alternative_source_transcripts=ENST00000435696.1,ENST00000435696.1;transcript_id=NA12877_ch_T0001729;gene_id=NA12877_ch_G0000616;Parent=NA12877_ch_T0001729;transcript_name=NA12877_ch_T0001729;gene_name=USP9YP35;ID=exon:NA12877_ch_T0001729:1;Name=USP9YP35;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24769634	24778275	.	-	.	source_gene_common_name=USP9YP31;source_gene=ENSG00000229250.1;alternative_source_transcripts=ENST00000431405.1,ENST00000431405.1;gene_id=NA12877_ch_G0000617;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP31;gene_sources=liftoff;ID=NA12877_ch_G0000617;Name=USP9YP31
NA12877_chrY	CAT	transcript	24769634	24778275	1000	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1,ENST00000431405.1;transcript_id=NA12877_ch_T0001730;gene_id=NA12877_ch_G0000617;Parent=NA12877_ch_G0000617;transcript_name=NA12877_ch_T0001730;gene_name=USP9YP31;ID=NA12877_ch_T0001730;Name=USP9YP31
NA12877_chrY	CAT	exon	24769634	24769753	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1,ENST00000431405.1;transcript_id=NA12877_ch_T0001730;gene_id=NA12877_ch_G0000617;Parent=NA12877_ch_T0001730;transcript_name=NA12877_ch_T0001730;gene_name=USP9YP31;ID=exon:NA12877_ch_T0001730:0;Name=USP9YP31;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24769754	24771756	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1,ENST00000431405.1;transcript_id=NA12877_ch_T0001730;gene_id=NA12877_ch_G0000617;Parent=NA12877_ch_T0001730;transcript_name=NA12877_ch_T0001730;gene_name=USP9YP31;ID=intron:NA12877_ch_T0001730:0;Name=USP9YP31;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24771757	24771885	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1,ENST00000431405.1;transcript_id=NA12877_ch_T0001730;gene_id=NA12877_ch_G0000617;Parent=NA12877_ch_T0001730;transcript_name=NA12877_ch_T0001730;gene_name=USP9YP31;ID=exon:NA12877_ch_T0001730:1;Name=USP9YP31;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24771886	24773700	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1,ENST00000431405.1;transcript_id=NA12877_ch_T0001730;gene_id=NA12877_ch_G0000617;Parent=NA12877_ch_T0001730;transcript_name=NA12877_ch_T0001730;gene_name=USP9YP31;ID=intron:NA12877_ch_T0001730:1;Name=USP9YP31;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24773701	24773890	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1,ENST00000431405.1;transcript_id=NA12877_ch_T0001730;gene_id=NA12877_ch_G0000617;Parent=NA12877_ch_T0001730;transcript_name=NA12877_ch_T0001730;gene_name=USP9YP31;ID=exon:NA12877_ch_T0001730:2;Name=USP9YP31;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24773891	24775688	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1,ENST00000431405.1;transcript_id=NA12877_ch_T0001730;gene_id=NA12877_ch_G0000617;Parent=NA12877_ch_T0001730;transcript_name=NA12877_ch_T0001730;gene_name=USP9YP31;ID=intron:NA12877_ch_T0001730:2;Name=USP9YP31;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24775689	24775908	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1,ENST00000431405.1;transcript_id=NA12877_ch_T0001730;gene_id=NA12877_ch_G0000617;Parent=NA12877_ch_T0001730;transcript_name=NA12877_ch_T0001730;gene_name=USP9YP31;ID=exon:NA12877_ch_T0001730:3;Name=USP9YP31;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24775909	24778053	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1,ENST00000431405.1;transcript_id=NA12877_ch_T0001730;gene_id=NA12877_ch_G0000617;Parent=NA12877_ch_T0001730;transcript_name=NA12877_ch_T0001730;gene_name=USP9YP31;ID=intron:NA12877_ch_T0001730:3;Name=USP9YP31;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24778054	24778275	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1,ENST00000431405.1;transcript_id=NA12877_ch_T0001730;gene_id=NA12877_ch_G0000617;Parent=NA12877_ch_T0001730;transcript_name=NA12877_ch_T0001730;gene_name=USP9YP31;ID=exon:NA12877_ch_T0001730:4;Name=USP9YP31;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24792036	24793947	.	+	.	source_gene_common_name=CDY18P;source_gene=ENSG00000232205.1;alternative_source_transcripts=ENST00000438294.1,ENST00000438294.1;gene_id=NA12877_ch_G0000618;gene_biotype=unprocessed_pseudogene;gene_name=CDY18P;gene_sources=liftoff;ID=NA12877_ch_G0000618;Name=CDY18P
NA12877_chrY	CAT	transcript	24792036	24793947	1000	+	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;alternative_source_transcripts=ENST00000438294.1,ENST00000438294.1;transcript_id=NA12877_ch_T0001731;gene_id=NA12877_ch_G0000618;Parent=NA12877_ch_G0000618;transcript_name=NA12877_ch_T0001731;gene_name=CDY18P;ID=NA12877_ch_T0001731;Name=CDY18P
NA12877_chrY	CAT	exon	24792036	24792229	.	+	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;alternative_source_transcripts=ENST00000438294.1,ENST00000438294.1;transcript_id=NA12877_ch_T0001731;gene_id=NA12877_ch_G0000618;Parent=NA12877_ch_T0001731;transcript_name=NA12877_ch_T0001731;gene_name=CDY18P;ID=exon:NA12877_ch_T0001731:0;Name=CDY18P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24792230	24792532	.	+	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;alternative_source_transcripts=ENST00000438294.1,ENST00000438294.1;transcript_id=NA12877_ch_T0001731;gene_id=NA12877_ch_G0000618;Parent=NA12877_ch_T0001731;transcript_name=NA12877_ch_T0001731;gene_name=CDY18P;ID=intron:NA12877_ch_T0001731:0;Name=CDY18P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24792533	24793947	.	+	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;alternative_source_transcripts=ENST00000438294.1,ENST00000438294.1;transcript_id=NA12877_ch_T0001731;gene_id=NA12877_ch_G0000618;Parent=NA12877_ch_T0001731;transcript_name=NA12877_ch_T0001731;gene_name=CDY18P;ID=exon:NA12877_ch_T0001731:1;Name=CDY18P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24825307	24841289	.	+	.	source_gene_common_name=ENSG00000299288;source_gene=ENSG00000299288.1;gene_id=NA12877_ch_G0000619;gene_biotype=lncRNA;gene_name=ENSG00000299288;gene_sources=liftoff;ID=NA12877_ch_G0000619;Name=ENSG00000299288
NA12877_chrY	CAT	transcript	24825307	24840706	1000	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001732;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_G0000619;transcript_name=NA12877_ch_T0001732;gene_name=ENSG00000299288;ID=NA12877_ch_T0001732;Name=ENSG00000299288
NA12877_chrY	CAT	exon	24825307	24825411	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001732;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001732;transcript_name=NA12877_ch_T0001732;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001732:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24825412	24830282	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001732;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001732;transcript_name=NA12877_ch_T0001732;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001732:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24830283	24830420	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001732;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001732;transcript_name=NA12877_ch_T0001732;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001732:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24830421	24833958	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001732;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001732;transcript_name=NA12877_ch_T0001732;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001732:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24833959	24834043	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001732;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001732;transcript_name=NA12877_ch_T0001732;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001732:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24834044	24840270	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001732;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001732;transcript_name=NA12877_ch_T0001732;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001732:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24840271	24840706	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001732;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001732;transcript_name=NA12877_ch_T0001732;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001732:3;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24825307	24840706	1000	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001733;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_G0000619;transcript_name=NA12877_ch_T0001733;gene_name=ENSG00000299288;ID=NA12877_ch_T0001733;Name=ENSG00000299288
NA12877_chrY	CAT	exon	24825307	24825411	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001733;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001733;transcript_name=NA12877_ch_T0001733;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001733:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24825412	24826159	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001733;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001733;transcript_name=NA12877_ch_T0001733;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001733:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24826160	24826322	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001733;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001733;transcript_name=NA12877_ch_T0001733;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001733:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24826323	24830282	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001733;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001733;transcript_name=NA12877_ch_T0001733;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001733:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24830283	24830420	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001733;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001733;transcript_name=NA12877_ch_T0001733;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001733:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24830421	24832780	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001733;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001733;transcript_name=NA12877_ch_T0001733;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001733:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24832781	24832865	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001733;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001733;transcript_name=NA12877_ch_T0001733;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001733:3;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24832866	24833958	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001733;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001733;transcript_name=NA12877_ch_T0001733;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001733:3;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24833959	24834043	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001733;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001733;transcript_name=NA12877_ch_T0001733;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001733:4;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24834044	24840270	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001733;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001733;transcript_name=NA12877_ch_T0001733;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001733:4;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24840271	24840706	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001733;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001733;transcript_name=NA12877_ch_T0001733;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001733:5;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24825307	24840706	1000	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001734;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_G0000619;transcript_name=NA12877_ch_T0001734;gene_name=ENSG00000299288;ID=NA12877_ch_T0001734;Name=ENSG00000299288
NA12877_chrY	CAT	exon	24825307	24825411	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001734;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001734;transcript_name=NA12877_ch_T0001734;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001734:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24825412	24826159	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001734;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001734;transcript_name=NA12877_ch_T0001734;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001734:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24826160	24826322	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001734;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001734;transcript_name=NA12877_ch_T0001734;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001734:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24826323	24830282	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001734;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001734;transcript_name=NA12877_ch_T0001734;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001734:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24830283	24830404	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001734;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001734;transcript_name=NA12877_ch_T0001734;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001734:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24830405	24832780	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001734;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001734;transcript_name=NA12877_ch_T0001734;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001734:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24832781	24832865	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001734;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001734;transcript_name=NA12877_ch_T0001734;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001734:3;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24832866	24833958	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001734;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001734;transcript_name=NA12877_ch_T0001734;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001734:3;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24833959	24834043	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001734;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001734;transcript_name=NA12877_ch_T0001734;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001734:4;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24834044	24840270	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001734;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001734;transcript_name=NA12877_ch_T0001734;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001734:4;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24840271	24840706	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001734;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001734;transcript_name=NA12877_ch_T0001734;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001734:5;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24825314	24840693	1000	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001735;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_G0000619;transcript_name=NA12877_ch_T0001735;gene_name=ENSG00000299288;ID=NA12877_ch_T0001735;Name=ENSG00000299288
NA12877_chrY	CAT	exon	24825314	24825411	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001735;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001735;transcript_name=NA12877_ch_T0001735;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001735:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24825412	24826159	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001735;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001735;transcript_name=NA12877_ch_T0001735;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001735:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24826160	24826322	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001735;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001735;transcript_name=NA12877_ch_T0001735;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001735:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24826323	24830282	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001735;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001735;transcript_name=NA12877_ch_T0001735;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001735:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24830283	24830420	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001735;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001735;transcript_name=NA12877_ch_T0001735;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001735:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24830421	24833958	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001735;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001735;transcript_name=NA12877_ch_T0001735;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001735:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24833959	24834043	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001735;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001735;transcript_name=NA12877_ch_T0001735;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001735:3;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24834044	24840270	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001735;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001735;transcript_name=NA12877_ch_T0001735;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001735:3;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24840271	24840693	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001735;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001735;transcript_name=NA12877_ch_T0001735;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001735:4;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24825862	24841289	1000	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001736;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_G0000619;transcript_name=NA12877_ch_T0001736;gene_name=ENSG00000299288;ID=NA12877_ch_T0001736;Name=ENSG00000299288
NA12877_chrY	CAT	exon	24825862	24826322	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001736;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001736;transcript_name=NA12877_ch_T0001736;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001736:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24826323	24830282	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001736;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001736;transcript_name=NA12877_ch_T0001736;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001736:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24830283	24830404	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001736;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001736;transcript_name=NA12877_ch_T0001736;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001736:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24830405	24832780	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001736;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001736;transcript_name=NA12877_ch_T0001736;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001736:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24832781	24832865	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001736;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001736;transcript_name=NA12877_ch_T0001736;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001736:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24832866	24833958	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001736;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001736;transcript_name=NA12877_ch_T0001736;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001736:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24833959	24834043	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001736;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001736;transcript_name=NA12877_ch_T0001736;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001736:3;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24834044	24840270	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001736;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001736;transcript_name=NA12877_ch_T0001736;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001736:3;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24840271	24841289	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001736;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001736;transcript_name=NA12877_ch_T0001736;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001736:4;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24825911	24840693	1000	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001737;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_G0000619;transcript_name=NA12877_ch_T0001737;gene_name=ENSG00000299288;ID=NA12877_ch_T0001737;Name=ENSG00000299288
NA12877_chrY	CAT	exon	24825911	24826322	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001737;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001737;transcript_name=NA12877_ch_T0001737;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001737:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24826323	24830282	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001737;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001737;transcript_name=NA12877_ch_T0001737;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001737:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24830283	24830404	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001737;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001737;transcript_name=NA12877_ch_T0001737;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001737:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24830405	24833958	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001737;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001737;transcript_name=NA12877_ch_T0001737;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001737:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24833959	24834043	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001737;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001737;transcript_name=NA12877_ch_T0001737;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001737:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24834044	24840270	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001737;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001737;transcript_name=NA12877_ch_T0001737;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001737:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24840271	24840693	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001737;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001737;transcript_name=NA12877_ch_T0001737;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001737:3;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24826087	24841289	1000	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001738;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_G0000619;transcript_name=NA12877_ch_T0001738;gene_name=ENSG00000299288;ID=NA12877_ch_T0001738;Name=ENSG00000299288
NA12877_chrY	CAT	exon	24826087	24826322	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001738;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001738;transcript_name=NA12877_ch_T0001738;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001738:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24826323	24830282	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001738;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001738;transcript_name=NA12877_ch_T0001738;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001738:0;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24830283	24830420	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001738;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001738;transcript_name=NA12877_ch_T0001738;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001738:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24830421	24833958	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001738;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001738;transcript_name=NA12877_ch_T0001738;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001738:1;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24833959	24834043	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001738;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001738;transcript_name=NA12877_ch_T0001738;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001738:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24834044	24840270	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001738;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001738;transcript_name=NA12877_ch_T0001738;gene_name=ENSG00000299288;ID=intron:NA12877_ch_T0001738:2;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24840271	24841289	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=NA12877_ch_T0001738;gene_id=NA12877_ch_G0000619;Parent=NA12877_ch_T0001738;transcript_name=NA12877_ch_T0001738;gene_name=ENSG00000299288;ID=exon:NA12877_ch_T0001738:3;Name=ENSG00000299288;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24830283	24845768	.	+	.	source_gene_common_name=ENSG00000235981;source_gene=ENSG00000235981.2;gene_id=NA12877_ch_G0000620;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000235981;gene_sources=liftoff;ID=NA12877_ch_G0000620;Name=ENSG00000235981
NA12877_chrY	CAT	transcript	24830283	24845768	1000	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=NA12877_ch_T0001739;gene_id=NA12877_ch_G0000620;Parent=NA12877_ch_G0000620;transcript_name=NA12877_ch_T0001739;gene_name=ENSG00000235981;ID=NA12877_ch_T0001739;Name=ENSG00000235981
NA12877_chrY	CAT	exon	24830283	24830420	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=NA12877_ch_T0001739;gene_id=NA12877_ch_G0000620;Parent=NA12877_ch_T0001739;transcript_name=NA12877_ch_T0001739;gene_name=ENSG00000235981;ID=exon:NA12877_ch_T0001739:0;Name=ENSG00000235981;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24830421	24832780	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=NA12877_ch_T0001739;gene_id=NA12877_ch_G0000620;Parent=NA12877_ch_T0001739;transcript_name=NA12877_ch_T0001739;gene_name=ENSG00000235981;ID=intron:NA12877_ch_T0001739:0;Name=ENSG00000235981;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24832781	24832865	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=NA12877_ch_T0001739;gene_id=NA12877_ch_G0000620;Parent=NA12877_ch_T0001739;transcript_name=NA12877_ch_T0001739;gene_name=ENSG00000235981;ID=exon:NA12877_ch_T0001739:1;Name=ENSG00000235981;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24832866	24833958	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=NA12877_ch_T0001739;gene_id=NA12877_ch_G0000620;Parent=NA12877_ch_T0001739;transcript_name=NA12877_ch_T0001739;gene_name=ENSG00000235981;ID=intron:NA12877_ch_T0001739:1;Name=ENSG00000235981;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24833959	24834043	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=NA12877_ch_T0001739;gene_id=NA12877_ch_G0000620;Parent=NA12877_ch_T0001739;transcript_name=NA12877_ch_T0001739;gene_name=ENSG00000235981;ID=exon:NA12877_ch_T0001739:2;Name=ENSG00000235981;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24834044	24838331	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=NA12877_ch_T0001739;gene_id=NA12877_ch_G0000620;Parent=NA12877_ch_T0001739;transcript_name=NA12877_ch_T0001739;gene_name=ENSG00000235981;ID=intron:NA12877_ch_T0001739:2;Name=ENSG00000235981;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24838332	24838390	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=NA12877_ch_T0001739;gene_id=NA12877_ch_G0000620;Parent=NA12877_ch_T0001739;transcript_name=NA12877_ch_T0001739;gene_name=ENSG00000235981;ID=exon:NA12877_ch_T0001739:3;Name=ENSG00000235981;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24838391	24844895	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=NA12877_ch_T0001739;gene_id=NA12877_ch_G0000620;Parent=NA12877_ch_T0001739;transcript_name=NA12877_ch_T0001739;gene_name=ENSG00000235981;ID=intron:NA12877_ch_T0001739:3;Name=ENSG00000235981;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24844896	24844944	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=NA12877_ch_T0001739;gene_id=NA12877_ch_G0000620;Parent=NA12877_ch_T0001739;transcript_name=NA12877_ch_T0001739;gene_name=ENSG00000235981;ID=exon:NA12877_ch_T0001739:4;Name=ENSG00000235981;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24844945	24845672	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=NA12877_ch_T0001739;gene_id=NA12877_ch_G0000620;Parent=NA12877_ch_T0001739;transcript_name=NA12877_ch_T0001739;gene_name=ENSG00000235981;ID=intron:NA12877_ch_T0001739:4;Name=ENSG00000235981;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24845673	24845768	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=NA12877_ch_T0001739;gene_id=NA12877_ch_G0000620;Parent=NA12877_ch_T0001739;transcript_name=NA12877_ch_T0001739;gene_name=ENSG00000235981;ID=exon:NA12877_ch_T0001739:5;Name=ENSG00000235981;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24856112	24862419	.	+	.	source_gene_common_name=GOLGA6L11P;source_gene=ENSG00000223698.3;gene_id=NA12877_ch_G0000621;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA6L11P;gene_sources=liftoff;ID=NA12877_ch_G0000621;Name=GOLGA6L11P
NA12877_chrY	CAT	transcript	24856112	24862419	1000	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_G0000621;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=NA12877_ch_T0001740;Name=GOLGA6L11P
NA12877_chrY	CAT	exon	24856112	24856195	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=exon:NA12877_ch_T0001740:0;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24856196	24857838	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=intron:NA12877_ch_T0001740:0;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24857839	24857958	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=exon:NA12877_ch_T0001740:1;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24857959	24858580	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=intron:NA12877_ch_T0001740:1;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24858581	24858640	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=exon:NA12877_ch_T0001740:2;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24858641	24858825	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=intron:NA12877_ch_T0001740:2;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24858826	24858906	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=exon:NA12877_ch_T0001740:3;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24858907	24859562	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=intron:NA12877_ch_T0001740:3;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24859563	24859637	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=exon:NA12877_ch_T0001740:4;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24859638	24860025	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=intron:NA12877_ch_T0001740:4;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860026	24860594	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=exon:NA12877_ch_T0001740:5;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860595	24860861	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=intron:NA12877_ch_T0001740:5;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24860922	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=exon:NA12877_ch_T0001740:6;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860923	24861962	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=intron:NA12877_ch_T0001740:6;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=exon:NA12877_ch_T0001740:7;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=intron:NA12877_ch_T0001740:7;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862419	.	+	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=NA12877_ch_T0001740;gene_id=NA12877_ch_G0000621;Parent=NA12877_ch_T0001740;transcript_name=NA12877_ch_T0001740;gene_name=GOLGA6L11P;ID=exon:NA12877_ch_T0001740:8;Name=GOLGA6L11P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24859557	24864358	.	+	.	source_gene_common_name=ENSG00000297966;source_gene=ENSG00000297966.1;gene_id=NA12877_ch_G0000622;gene_biotype=lncRNA;gene_name=ENSG00000297966;gene_sources=liftoff;ID=NA12877_ch_G0000622;Name=ENSG00000297966
NA12877_chrY	CAT	transcript	24859557	24862451	1000	+	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001741;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001741;gene_name=ENSG00000297966;ID=NA12877_ch_T0001741;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24859557	24859637	.	+	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001741;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001741;transcript_name=NA12877_ch_T0001741;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001741:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24859638	24860861	.	+	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001741;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001741;transcript_name=NA12877_ch_T0001741;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001741:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24861100	.	+	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001741;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001741;transcript_name=NA12877_ch_T0001741;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001741:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24861101	24861962	.	+	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001741;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001741;transcript_name=NA12877_ch_T0001741;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001741:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001741;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001741;transcript_name=NA12877_ch_T0001741;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001741:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001741;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001741;transcript_name=NA12877_ch_T0001741;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001741:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862451	.	+	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001741;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001741;transcript_name=NA12877_ch_T0001741;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001741:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24859580	24862451	1000	+	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001742;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001742;gene_name=ENSG00000297966;ID=NA12877_ch_T0001742;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24859580	24859637	.	+	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001742;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001742;transcript_name=NA12877_ch_T0001742;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001742:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24859638	24860861	.	+	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001742;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001742;transcript_name=NA12877_ch_T0001742;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001742:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24860922	.	+	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001742;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001742;transcript_name=NA12877_ch_T0001742;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001742:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860923	24861962	.	+	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001742;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001742;transcript_name=NA12877_ch_T0001742;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001742:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001742;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001742;transcript_name=NA12877_ch_T0001742;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001742:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001742;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001742;transcript_name=NA12877_ch_T0001742;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001742:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862451	.	+	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001742;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001742;transcript_name=NA12877_ch_T0001742;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001742:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24859987	24864358	1000	+	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001743;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001743;gene_name=ENSG00000297966;ID=NA12877_ch_T0001743;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24859987	24860594	.	+	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001743;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001743;transcript_name=NA12877_ch_T0001743;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001743:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860595	24860861	.	+	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001743;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001743;transcript_name=NA12877_ch_T0001743;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001743:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24860922	.	+	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001743;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001743;transcript_name=NA12877_ch_T0001743;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001743:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860923	24861962	.	+	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001743;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001743;transcript_name=NA12877_ch_T0001743;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001743:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001743;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001743;transcript_name=NA12877_ch_T0001743;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001743:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001743;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001743;transcript_name=NA12877_ch_T0001743;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001743:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24864358	.	+	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001743;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001743;transcript_name=NA12877_ch_T0001743;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001743:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860113	24862451	1000	+	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001744;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001744;gene_name=ENSG00000297966;ID=NA12877_ch_T0001744;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860113	24860423	.	+	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001744;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001744;transcript_name=NA12877_ch_T0001744;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001744:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860424	24860861	.	+	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001744;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001744;transcript_name=NA12877_ch_T0001744;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001744:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24861100	.	+	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001744;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001744;transcript_name=NA12877_ch_T0001744;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001744:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24861101	24861962	.	+	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001744;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001744;transcript_name=NA12877_ch_T0001744;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001744:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001744;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001744;transcript_name=NA12877_ch_T0001744;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001744:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001744;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001744;transcript_name=NA12877_ch_T0001744;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001744:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862451	.	+	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001744;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001744;transcript_name=NA12877_ch_T0001744;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001744:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860113	24862451	1000	+	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001745;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001745;gene_name=ENSG00000297966;ID=NA12877_ch_T0001745;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860113	24860594	.	+	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001745;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001745;transcript_name=NA12877_ch_T0001745;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001745:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860595	24860861	.	+	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001745;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001745;transcript_name=NA12877_ch_T0001745;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001745:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24860939	.	+	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001745;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001745;transcript_name=NA12877_ch_T0001745;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001745:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860940	24861962	.	+	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001745;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001745;transcript_name=NA12877_ch_T0001745;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001745:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001745;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001745;transcript_name=NA12877_ch_T0001745;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001745:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001745;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001745;transcript_name=NA12877_ch_T0001745;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001745:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862451	.	+	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001745;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001745;transcript_name=NA12877_ch_T0001745;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001745:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860151	24862451	1000	+	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001746;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001746;gene_name=ENSG00000297966;ID=NA12877_ch_T0001746;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860151	24860323	.	+	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001746;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001746;transcript_name=NA12877_ch_T0001746;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001746:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860324	24860861	.	+	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001746;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001746;transcript_name=NA12877_ch_T0001746;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001746:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24860922	.	+	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001746;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001746;transcript_name=NA12877_ch_T0001746;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001746:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860923	24861962	.	+	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001746;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001746;transcript_name=NA12877_ch_T0001746;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001746:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001746;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001746;transcript_name=NA12877_ch_T0001746;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001746:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001746;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001746;transcript_name=NA12877_ch_T0001746;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001746:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862451	.	+	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001746;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001746;transcript_name=NA12877_ch_T0001746;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001746:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860152	24862451	1000	+	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001747;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001747;gene_name=ENSG00000297966;ID=NA12877_ch_T0001747;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860152	24860323	.	+	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001747;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001747;transcript_name=NA12877_ch_T0001747;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001747:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860324	24860861	.	+	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001747;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001747;transcript_name=NA12877_ch_T0001747;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001747:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24861100	.	+	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001747;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001747;transcript_name=NA12877_ch_T0001747;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001747:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24861101	24861962	.	+	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001747;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001747;transcript_name=NA12877_ch_T0001747;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001747:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001747;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001747;transcript_name=NA12877_ch_T0001747;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001747:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001747;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001747;transcript_name=NA12877_ch_T0001747;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001747:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862451	.	+	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001747;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001747;transcript_name=NA12877_ch_T0001747;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001747:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860181	24862451	1000	+	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001748;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001748;gene_name=ENSG00000297966;ID=NA12877_ch_T0001748;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860181	24860423	.	+	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001748;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001748;transcript_name=NA12877_ch_T0001748;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001748:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860424	24860861	.	+	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001748;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001748;transcript_name=NA12877_ch_T0001748;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001748:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24860922	.	+	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001748;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001748;transcript_name=NA12877_ch_T0001748;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001748:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860923	24861962	.	+	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001748;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001748;transcript_name=NA12877_ch_T0001748;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001748:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001748;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001748;transcript_name=NA12877_ch_T0001748;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001748:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001748;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001748;transcript_name=NA12877_ch_T0001748;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001748:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862451	.	+	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001748;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001748;transcript_name=NA12877_ch_T0001748;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001748:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860182	24862451	1000	+	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001749;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001749;gene_name=ENSG00000297966;ID=NA12877_ch_T0001749;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860182	24860594	.	+	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001749;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001749;transcript_name=NA12877_ch_T0001749;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001749:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860595	24860861	.	+	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001749;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001749;transcript_name=NA12877_ch_T0001749;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001749:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24861100	.	+	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001749;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001749;transcript_name=NA12877_ch_T0001749;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001749:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24861101	24861962	.	+	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001749;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001749;transcript_name=NA12877_ch_T0001749;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001749:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001749;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001749;transcript_name=NA12877_ch_T0001749;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001749:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001749;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001749;transcript_name=NA12877_ch_T0001749;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001749:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862451	.	+	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001749;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001749;transcript_name=NA12877_ch_T0001749;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001749:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860300	24862451	1000	+	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001750;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001750;gene_name=ENSG00000297966;ID=NA12877_ch_T0001750;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860300	24860423	.	+	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001750;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001750;transcript_name=NA12877_ch_T0001750;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001750:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860424	24860861	.	+	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001750;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001750;transcript_name=NA12877_ch_T0001750;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001750:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24860939	.	+	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001750;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001750;transcript_name=NA12877_ch_T0001750;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001750:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860940	24861962	.	+	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001750;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001750;transcript_name=NA12877_ch_T0001750;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001750:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001750;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001750;transcript_name=NA12877_ch_T0001750;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001750:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001750;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001750;transcript_name=NA12877_ch_T0001750;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001750:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862451	.	+	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001750;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001750;transcript_name=NA12877_ch_T0001750;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001750:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860367	24862448	1000	+	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001751;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001751;gene_name=ENSG00000297966;ID=NA12877_ch_T0001751;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860367	24860509	.	+	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001751;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001751;transcript_name=NA12877_ch_T0001751;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001751:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860510	24860861	.	+	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001751;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001751;transcript_name=NA12877_ch_T0001751;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001751:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24860939	.	+	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001751;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001751;transcript_name=NA12877_ch_T0001751;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001751:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860940	24861962	.	+	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001751;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001751;transcript_name=NA12877_ch_T0001751;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001751:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001751;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001751;transcript_name=NA12877_ch_T0001751;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001751:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001751;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001751;transcript_name=NA12877_ch_T0001751;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001751:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862448	.	+	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001751;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001751;transcript_name=NA12877_ch_T0001751;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001751:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860386	24862449	1000	+	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001752;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001752;gene_name=ENSG00000297966;ID=NA12877_ch_T0001752;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860386	24860594	.	+	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001752;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001752;transcript_name=NA12877_ch_T0001752;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001752:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860595	24860861	.	+	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001752;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001752;transcript_name=NA12877_ch_T0001752;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001752:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24861100	.	+	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001752;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001752;transcript_name=NA12877_ch_T0001752;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001752:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24861101	24861962	.	+	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001752;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001752;transcript_name=NA12877_ch_T0001752;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001752:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862449	.	+	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001752;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001752;transcript_name=NA12877_ch_T0001752;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001752:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860390	24862451	1000	+	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001753;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001753;gene_name=ENSG00000297966;ID=NA12877_ch_T0001753;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860390	24860509	.	+	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001753;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001753;transcript_name=NA12877_ch_T0001753;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001753:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860510	24860861	.	+	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001753;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001753;transcript_name=NA12877_ch_T0001753;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001753:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24860922	.	+	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001753;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001753;transcript_name=NA12877_ch_T0001753;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001753:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860923	24861962	.	+	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001753;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001753;transcript_name=NA12877_ch_T0001753;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001753:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001753;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001753;transcript_name=NA12877_ch_T0001753;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001753:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001753;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001753;transcript_name=NA12877_ch_T0001753;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001753:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862451	.	+	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001753;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001753;transcript_name=NA12877_ch_T0001753;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001753:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860402	24862451	1000	+	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001754;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001754;gene_name=ENSG00000297966;ID=NA12877_ch_T0001754;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860402	24860594	.	+	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001754;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001754;transcript_name=NA12877_ch_T0001754;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001754:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860595	24860861	.	+	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001754;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001754;transcript_name=NA12877_ch_T0001754;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001754:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24860922	.	+	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001754;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001754;transcript_name=NA12877_ch_T0001754;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001754:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860923	24861962	.	+	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001754;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001754;transcript_name=NA12877_ch_T0001754;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001754:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862451	.	+	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001754;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001754;transcript_name=NA12877_ch_T0001754;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001754:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860483	24862451	1000	+	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001755;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001755;gene_name=ENSG00000297966;ID=NA12877_ch_T0001755;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860483	24860750	.	+	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001755;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001755;transcript_name=NA12877_ch_T0001755;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001755:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860751	24860861	.	+	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001755;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001755;transcript_name=NA12877_ch_T0001755;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001755:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24860922	.	+	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001755;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001755;transcript_name=NA12877_ch_T0001755;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001755:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860923	24861962	.	+	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001755;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001755;transcript_name=NA12877_ch_T0001755;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001755:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001755;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001755;transcript_name=NA12877_ch_T0001755;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001755:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001755;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001755;transcript_name=NA12877_ch_T0001755;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001755:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862451	.	+	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001755;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001755;transcript_name=NA12877_ch_T0001755;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001755:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860567	24862450	1000	+	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001756;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001756;gene_name=ENSG00000297966;ID=NA12877_ch_T0001756;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860567	24860750	.	+	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001756;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001756;transcript_name=NA12877_ch_T0001756;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001756:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860751	24860861	.	+	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001756;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001756;transcript_name=NA12877_ch_T0001756;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001756:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24861100	.	+	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001756;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001756;transcript_name=NA12877_ch_T0001756;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001756:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24861101	24861962	.	+	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001756;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001756;transcript_name=NA12877_ch_T0001756;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001756:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001756;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001756;transcript_name=NA12877_ch_T0001756;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001756:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001756;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001756;transcript_name=NA12877_ch_T0001756;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001756:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862450	.	+	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001756;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001756;transcript_name=NA12877_ch_T0001756;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001756:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860577	24862450	1000	+	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001757;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001757;gene_name=ENSG00000297966;ID=NA12877_ch_T0001757;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860577	24860750	.	+	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001757;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001757;transcript_name=NA12877_ch_T0001757;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001757:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860751	24860861	.	+	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001757;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001757;transcript_name=NA12877_ch_T0001757;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001757:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24860939	.	+	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001757;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001757;transcript_name=NA12877_ch_T0001757;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001757:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860940	24861962	.	+	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001757;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001757;transcript_name=NA12877_ch_T0001757;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001757:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001757;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001757;transcript_name=NA12877_ch_T0001757;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001757:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001757;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001757;transcript_name=NA12877_ch_T0001757;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001757:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862450	.	+	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001757;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001757;transcript_name=NA12877_ch_T0001757;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001757:3;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860609	24862450	1000	+	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001758;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001758;gene_name=ENSG00000297966;ID=NA12877_ch_T0001758;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860609	24860750	.	+	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001758;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001758;transcript_name=NA12877_ch_T0001758;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001758:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860751	24860861	.	+	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001758;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001758;transcript_name=NA12877_ch_T0001758;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001758:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24860862	24861100	.	+	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001758;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001758;transcript_name=NA12877_ch_T0001758;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001758:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24861101	24861962	.	+	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001758;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001758;transcript_name=NA12877_ch_T0001758;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001758:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862450	.	+	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001758;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001758;transcript_name=NA12877_ch_T0001758;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001758:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24860764	24862451	1000	+	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001759;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001759;gene_name=ENSG00000297966;ID=NA12877_ch_T0001759;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24860764	24860922	.	+	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001759;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001759;transcript_name=NA12877_ch_T0001759;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001759:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24860923	24861962	.	+	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001759;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001759;transcript_name=NA12877_ch_T0001759;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001759:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24861963	24862077	.	+	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001759;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001759;transcript_name=NA12877_ch_T0001759;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001759:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001759;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001759;transcript_name=NA12877_ch_T0001759;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001759:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862451	.	+	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001759;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001759;transcript_name=NA12877_ch_T0001759;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001759:2;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24861758	24862450	1000	+	.	source_transcript=ENST00000752200.1;source_transcript_name=ENST00000752200;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752200.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001760;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_G0000622;transcript_name=NA12877_ch_T0001760;gene_name=ENSG00000297966;ID=NA12877_ch_T0001760;Name=ENSG00000297966
NA12877_chrY	CAT	exon	24861758	24862077	.	+	.	source_transcript=ENST00000752200.1;source_transcript_name=ENST00000752200;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752200.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001760;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001760;transcript_name=NA12877_ch_T0001760;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001760:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24862078	24862286	.	+	.	source_transcript=ENST00000752200.1;source_transcript_name=ENST00000752200;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752200.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001760;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001760;transcript_name=NA12877_ch_T0001760;gene_name=ENSG00000297966;ID=intron:NA12877_ch_T0001760:0;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24862287	24862450	.	+	.	source_transcript=ENST00000752200.1;source_transcript_name=ENST00000752200;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752200.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=NA12877_ch_T0001760;gene_id=NA12877_ch_G0000622;Parent=NA12877_ch_T0001760;transcript_name=NA12877_ch_T0001760;gene_name=ENSG00000297966;ID=exon:NA12877_ch_T0001760:1;Name=ENSG00000297966;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24867241	24871430	.	-	.	source_gene_common_name=DNM1P24;source_gene=ENSG00000242854.1;gene_id=NA12877_ch_G0000623;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=DNM1P24;gene_sources=liftoff;ID=NA12877_ch_G0000623;Name=DNM1P24
NA12877_chrY	CAT	transcript	24867241	24871430	1000	-	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=NA12877_ch_T0001761;gene_id=NA12877_ch_G0000623;Parent=NA12877_ch_G0000623;transcript_name=NA12877_ch_T0001761;gene_name=DNM1P24;ID=NA12877_ch_T0001761;Name=DNM1P24
NA12877_chrY	CAT	exon	24867241	24867293	.	-	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=NA12877_ch_T0001761;gene_id=NA12877_ch_G0000623;Parent=NA12877_ch_T0001761;transcript_name=NA12877_ch_T0001761;gene_name=DNM1P24;ID=exon:NA12877_ch_T0001761:0;Name=DNM1P24;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24867294	24870742	.	-	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=NA12877_ch_T0001761;gene_id=NA12877_ch_G0000623;Parent=NA12877_ch_T0001761;transcript_name=NA12877_ch_T0001761;gene_name=DNM1P24;ID=intron:NA12877_ch_T0001761:0;Name=DNM1P24;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24870743	24870947	.	-	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=NA12877_ch_T0001761;gene_id=NA12877_ch_G0000623;Parent=NA12877_ch_T0001761;transcript_name=NA12877_ch_T0001761;gene_name=DNM1P24;ID=exon:NA12877_ch_T0001761:1;Name=DNM1P24;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24870948	24871198	.	-	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=NA12877_ch_T0001761;gene_id=NA12877_ch_G0000623;Parent=NA12877_ch_T0001761;transcript_name=NA12877_ch_T0001761;gene_name=DNM1P24;ID=intron:NA12877_ch_T0001761:1;Name=DNM1P24;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24871199	24871430	.	-	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=NA12877_ch_T0001761;gene_id=NA12877_ch_G0000623;Parent=NA12877_ch_T0001761;transcript_name=NA12877_ch_T0001761;gene_name=DNM1P24;ID=exon:NA12877_ch_T0001761:2;Name=DNM1P24;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24870402	24870996	.	+	.	source_gene_common_name=ENSG00000230977;source_gene=ENSG00000230977.1;alternative_source_transcripts=ENST00000418278.1,ENST00000418278.1;gene_id=NA12877_ch_G0000624;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000230977;gene_sources=liftoff;ID=NA12877_ch_G0000624;Name=ENSG00000230977
NA12877_chrY	CAT	transcript	24870402	24870996	1000	+	.	source_transcript=ENST00000418278.1;source_transcript_name=ENST00000418278;source_gene=ENSG00000230977.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230977.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418278.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230977;alternative_source_transcripts=ENST00000418278.1,ENST00000418278.1;transcript_id=NA12877_ch_T0001762;gene_id=NA12877_ch_G0000624;Parent=NA12877_ch_G0000624;transcript_name=NA12877_ch_T0001762;gene_name=ENSG00000230977;ID=NA12877_ch_T0001762;Name=ENSG00000230977
NA12877_chrY	CAT	exon	24870402	24870996	.	+	.	source_transcript=ENST00000418278.1;source_transcript_name=ENST00000418278;source_gene=ENSG00000230977.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230977.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418278.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230977;alternative_source_transcripts=ENST00000418278.1,ENST00000418278.1;transcript_id=NA12877_ch_T0001762;gene_id=NA12877_ch_G0000624;Parent=NA12877_ch_T0001762;transcript_name=NA12877_ch_T0001762;gene_name=ENSG00000230977;ID=exon:NA12877_ch_T0001762:0;Name=ENSG00000230977;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24871359	24875156	.	-	.	source_gene_common_name=CSPG4P2Y;source_gene=ENSG00000244231.1;gene_id=NA12877_ch_G0000625;gene_biotype=lncRNA;gene_name=CSPG4P2Y;gene_sources=liftoff;ID=NA12877_ch_G0000625;Name=CSPG4P2Y
NA12877_chrY	CAT	transcript	24871359	24875156	1000	-	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=NA12877_ch_T0001763;gene_id=NA12877_ch_G0000625;Parent=NA12877_ch_G0000625;transcript_name=NA12877_ch_T0001763;gene_name=CSPG4P2Y;ID=NA12877_ch_T0001763;Name=CSPG4P2Y
NA12877_chrY	CAT	exon	24871359	24871430	.	-	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=NA12877_ch_T0001763;gene_id=NA12877_ch_G0000625;Parent=NA12877_ch_T0001763;transcript_name=NA12877_ch_T0001763;gene_name=CSPG4P2Y;ID=exon:NA12877_ch_T0001763:0;Name=CSPG4P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24871431	24874433	.	-	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=NA12877_ch_T0001763;gene_id=NA12877_ch_G0000625;Parent=NA12877_ch_T0001763;transcript_name=NA12877_ch_T0001763;gene_name=CSPG4P2Y;ID=intron:NA12877_ch_T0001763:0;Name=CSPG4P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24874434	24875156	.	-	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=NA12877_ch_T0001763;gene_id=NA12877_ch_G0000625;Parent=NA12877_ch_T0001763;transcript_name=NA12877_ch_T0001763;gene_name=CSPG4P2Y;ID=exon:NA12877_ch_T0001763:1;Name=CSPG4P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24874434	24879795	.	-	.	source_gene_common_name=CSPG4P3Y;source_gene=ENSG00000172342.5;alternative_source_transcripts=ENST00000418188.1;gene_id=NA12877_ch_G0000626;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CSPG4P3Y;gene_sources=liftoff;ID=NA12877_ch_G0000626;Name=CSPG4P3Y
NA12877_chrY	CAT	transcript	24874434	24879795	1000	-	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;alternative_source_transcripts=ENST00000418188.1;transcript_id=NA12877_ch_T0001764;gene_id=NA12877_ch_G0000626;Parent=NA12877_ch_G0000626;transcript_name=NA12877_ch_T0001764;gene_name=CSPG4P3Y;ID=NA12877_ch_T0001764;Name=CSPG4P3Y
NA12877_chrY	CAT	exon	24874434	24877993	.	-	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;alternative_source_transcripts=ENST00000418188.1;transcript_id=NA12877_ch_T0001764;gene_id=NA12877_ch_G0000626;Parent=NA12877_ch_T0001764;transcript_name=NA12877_ch_T0001764;gene_name=CSPG4P3Y;ID=exon:NA12877_ch_T0001764:0;Name=CSPG4P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24877994	24879631	.	-	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;alternative_source_transcripts=ENST00000418188.1;transcript_id=NA12877_ch_T0001764;gene_id=NA12877_ch_G0000626;Parent=NA12877_ch_T0001764;transcript_name=NA12877_ch_T0001764;gene_name=CSPG4P3Y;ID=intron:NA12877_ch_T0001764:0;Name=CSPG4P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24879632	24879795	.	-	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;alternative_source_transcripts=ENST00000418188.1;transcript_id=NA12877_ch_T0001764;gene_id=NA12877_ch_G0000626;Parent=NA12877_ch_T0001764;transcript_name=NA12877_ch_T0001764;gene_name=CSPG4P3Y;ID=exon:NA12877_ch_T0001764:1;Name=CSPG4P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24877419	24893965	.	-	.	source_gene_common_name=ENSG00000296017;source_gene=ENSG00000296017.1;gene_id=NA12877_ch_G0000627;gene_biotype=lncRNA;gene_name=ENSG00000296017;gene_sources=liftoff;ID=NA12877_ch_G0000627;Name=ENSG00000296017
NA12877_chrY	CAT	transcript	24877419	24893964	1000	-	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001765;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_G0000627;transcript_name=NA12877_ch_T0001765;gene_name=ENSG00000296017;ID=NA12877_ch_T0001765;Name=ENSG00000296017
NA12877_chrY	CAT	exon	24877419	24877993	.	-	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001765;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001765;transcript_name=NA12877_ch_T0001765;gene_name=ENSG00000296017;ID=exon:NA12877_ch_T0001765:0;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24877994	24879631	.	-	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001765;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001765;transcript_name=NA12877_ch_T0001765;gene_name=ENSG00000296017;ID=intron:NA12877_ch_T0001765:0;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24879632	24879795	.	-	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001765;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001765;transcript_name=NA12877_ch_T0001765;gene_name=ENSG00000296017;ID=exon:NA12877_ch_T0001765:1;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24879796	24884499	.	-	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001765;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001765;transcript_name=NA12877_ch_T0001765;gene_name=ENSG00000296017;ID=intron:NA12877_ch_T0001765:1;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24884500	24884604	.	-	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001765;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001765;transcript_name=NA12877_ch_T0001765;gene_name=ENSG00000296017;ID=exon:NA12877_ch_T0001765:2;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24884605	24892401	.	-	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001765;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001765;transcript_name=NA12877_ch_T0001765;gene_name=ENSG00000296017;ID=intron:NA12877_ch_T0001765:2;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24892402	24892580	.	-	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001765;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001765;transcript_name=NA12877_ch_T0001765;gene_name=ENSG00000296017;ID=exon:NA12877_ch_T0001765:3;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24892581	24893597	.	-	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001765;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001765;transcript_name=NA12877_ch_T0001765;gene_name=ENSG00000296017;ID=intron:NA12877_ch_T0001765:3;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24893598	24893964	.	-	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001765;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001765;transcript_name=NA12877_ch_T0001765;gene_name=ENSG00000296017;ID=exon:NA12877_ch_T0001765:4;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24884384	24893810	1000	-	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001766;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_G0000627;transcript_name=NA12877_ch_T0001766;gene_name=ENSG00000296017;ID=NA12877_ch_T0001766;Name=ENSG00000296017
NA12877_chrY	CAT	exon	24884384	24884604	.	-	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001766;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001766;transcript_name=NA12877_ch_T0001766;gene_name=ENSG00000296017;ID=exon:NA12877_ch_T0001766:0;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24884605	24892401	.	-	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001766;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001766;transcript_name=NA12877_ch_T0001766;gene_name=ENSG00000296017;ID=intron:NA12877_ch_T0001766:0;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24892402	24892580	.	-	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001766;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001766;transcript_name=NA12877_ch_T0001766;gene_name=ENSG00000296017;ID=exon:NA12877_ch_T0001766:1;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24892581	24893597	.	-	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001766;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001766;transcript_name=NA12877_ch_T0001766;gene_name=ENSG00000296017;ID=intron:NA12877_ch_T0001766:1;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24893598	24893810	.	-	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001766;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001766;transcript_name=NA12877_ch_T0001766;gene_name=ENSG00000296017;ID=exon:NA12877_ch_T0001766:2;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24884384	24893965	1000	-	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001767;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_G0000627;transcript_name=NA12877_ch_T0001767;gene_name=ENSG00000296017;ID=NA12877_ch_T0001767;Name=ENSG00000296017
NA12877_chrY	CAT	exon	24884384	24884604	.	-	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001767;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001767;transcript_name=NA12877_ch_T0001767;gene_name=ENSG00000296017;ID=exon:NA12877_ch_T0001767:0;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24884605	24892401	.	-	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001767;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001767;transcript_name=NA12877_ch_T0001767;gene_name=ENSG00000296017;ID=intron:NA12877_ch_T0001767:0;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24892402	24892551	.	-	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001767;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001767;transcript_name=NA12877_ch_T0001767;gene_name=ENSG00000296017;ID=exon:NA12877_ch_T0001767:1;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24892552	24893597	.	-	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001767;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001767;transcript_name=NA12877_ch_T0001767;gene_name=ENSG00000296017;ID=intron:NA12877_ch_T0001767:1;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24893598	24893965	.	-	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=NA12877_ch_T0001767;gene_id=NA12877_ch_G0000627;Parent=NA12877_ch_T0001767;transcript_name=NA12877_ch_T0001767;gene_name=ENSG00000296017;ID=exon:NA12877_ch_T0001767:2;Name=ENSG00000296017;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24884443	24894057	.	-	.	source_gene_common_name=ENSG00000284071;source_gene=ENSG00000284071.1;gene_id=NA12877_ch_G0000628;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000284071;gene_sources=liftoff;ID=NA12877_ch_G0000628;Name=ENSG00000284071
NA12877_chrY	CAT	transcript	24884443	24894057	1000	-	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=NA12877_ch_T0001768;gene_id=NA12877_ch_G0000628;Parent=NA12877_ch_G0000628;transcript_name=NA12877_ch_T0001768;gene_name=ENSG00000284071;ID=NA12877_ch_T0001768;Name=ENSG00000284071
NA12877_chrY	CAT	exon	24884443	24884604	.	-	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=NA12877_ch_T0001768;gene_id=NA12877_ch_G0000628;Parent=NA12877_ch_T0001768;transcript_name=NA12877_ch_T0001768;gene_name=ENSG00000284071;ID=exon:NA12877_ch_T0001768:0;Name=ENSG00000284071;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24884605	24892401	.	-	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=NA12877_ch_T0001768;gene_id=NA12877_ch_G0000628;Parent=NA12877_ch_T0001768;transcript_name=NA12877_ch_T0001768;gene_name=ENSG00000284071;ID=intron:NA12877_ch_T0001768:0;Name=ENSG00000284071;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24892402	24892551	.	-	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=NA12877_ch_T0001768;gene_id=NA12877_ch_G0000628;Parent=NA12877_ch_T0001768;transcript_name=NA12877_ch_T0001768;gene_name=ENSG00000284071;ID=exon:NA12877_ch_T0001768:1;Name=ENSG00000284071;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24892552	24893972	.	-	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=NA12877_ch_T0001768;gene_id=NA12877_ch_G0000628;Parent=NA12877_ch_T0001768;transcript_name=NA12877_ch_T0001768;gene_name=ENSG00000284071;ID=intron:NA12877_ch_T0001768:1;Name=ENSG00000284071;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24893973	24894057	.	-	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=NA12877_ch_T0001768;gene_id=NA12877_ch_G0000628;Parent=NA12877_ch_T0001768;transcript_name=NA12877_ch_T0001768;gene_name=ENSG00000284071;ID=exon:NA12877_ch_T0001768:2;Name=ENSG00000284071;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24897494	24903508	.	-	.	source_gene_common_name=GOLGA2P2Y;source_gene=ENSG00000239533.7;gene_id=NA12877_ch_G0000629;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=NA12877_ch_G0000629;Name=GOLGA2P2Y
NA12877_chrY	CAT	transcript	24897494	24903508	1000	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_G0000629;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=NA12877_ch_T0001769;Name=GOLGA2P2Y
NA12877_chrY	CAT	exon	24897494	24897550	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24897551	24897651	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001769:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24897652	24897798	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24897799	24897881	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001769:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24897882	24897977	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24897978	24898059	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001769:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24898060	24898152	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24898153	24898241	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001769:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24898242	24898430	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24898431	24898685	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001769:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24898686	24898774	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24898775	24899194	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001769:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24899195	24899269	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24899270	24900625	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001769:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24900626	24900683	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24900684	24900981	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001769:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24900982	24901332	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24901333	24901719	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001769:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24901720	24901809	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:9;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24901810	24902450	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001769:9;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24902451	24902531	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:10;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24902532	24902715	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001769:10;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24902716	24902775	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:11;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24902776	24903388	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001769:11;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24903389	24903508	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001769;gene_id=NA12877_ch_G0000629;Parent=NA12877_ch_T0001769;transcript_name=NA12877_ch_T0001769;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001769:12;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24897894	24902758	.	-	.	source_gene_common_name=GOLGA2P2Y;source_gene=ENSG00000291016.1;gene_id=NA12877_ch_G0000630;gene_biotype=lncRNA;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=NA12877_ch_G0000630;Name=GOLGA2P2Y
NA12877_chrY	CAT	transcript	24897894	24902758	1000	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_G0000630;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=NA12877_ch_T0001770;Name=GOLGA2P2Y
NA12877_chrY	CAT	exon	24897894	24897977	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001770:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24897978	24898059	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001770:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24898060	24898152	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001770:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24898153	24898241	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001770:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24898242	24898430	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001770:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24898431	24898685	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001770:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24898686	24898774	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001770:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24898775	24899194	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001770:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24899195	24899269	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001770:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24899270	24900625	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001770:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24900626	24900683	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001770:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24900684	24900981	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001770:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24900982	24901331	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001770:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24901332	24902450	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001770:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24902451	24902529	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001770:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24902530	24902715	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=intron:NA12877_ch_T0001770:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24902716	24902758	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=NA12877_ch_T0001770;gene_id=NA12877_ch_G0000630;Parent=NA12877_ch_T0001770;transcript_name=NA12877_ch_T0001770;gene_name=GOLGA2P2Y;ID=exon:NA12877_ch_T0001770:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24898885	24899143	.	-	.	source_gene_common_name=RN7SL818P;source_gene=ENSG00000274234.1;alternative_source_transcripts=ENST00000485099.3;gene_id=NA12877_ch_G0000631;gene_biotype=misc_RNA;gene_name=RN7SL818P;gene_sources=liftoff;ID=NA12877_ch_G0000631;Name=RN7SL818P
NA12877_chrY	CAT	transcript	24898885	24899143	1000	-	.	source_transcript=ENST00000485099.3;source_transcript_name=RN7SL818P-201;source_gene=ENSG00000274234.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000274234.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000485099.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000485099.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL818P;alternative_source_transcripts=ENST00000485099.3;transcript_id=NA12877_ch_T0001771;gene_id=NA12877_ch_G0000631;Parent=NA12877_ch_G0000631;transcript_name=NA12877_ch_T0001771;gene_name=RN7SL818P;ID=NA12877_ch_T0001771;Name=RN7SL818P
NA12877_chrY	CAT	exon	24898885	24899143	.	-	.	source_transcript=ENST00000485099.3;source_transcript_name=RN7SL818P-201;source_gene=ENSG00000274234.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000274234.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000485099.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000485099.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL818P;alternative_source_transcripts=ENST00000485099.3;transcript_id=NA12877_ch_T0001771;gene_id=NA12877_ch_G0000631;Parent=NA12877_ch_T0001771;transcript_name=NA12877_ch_T0001771;gene_name=RN7SL818P;ID=exon:NA12877_ch_T0001771:0;Name=RN7SL818P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24920753	24926911	.	-	.	source_gene_common_name=UBE2Q2P4Y;source_gene=ENSG00000225491.1;alternative_source_transcripts=ENST00000433767.1;gene_id=NA12877_ch_G0000632;gene_biotype=unprocessed_pseudogene;gene_name=UBE2Q2P4Y;gene_sources=liftoff;ID=NA12877_ch_G0000632;Name=UBE2Q2P4Y
NA12877_chrY	CAT	transcript	24920753	24926911	1000	-	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=NA12877_ch_T0001772;gene_id=NA12877_ch_G0000632;Parent=NA12877_ch_G0000632;transcript_name=NA12877_ch_T0001772;gene_name=UBE2Q2P4Y;ID=NA12877_ch_T0001772;Name=UBE2Q2P4Y
NA12877_chrY	CAT	exon	24920753	24920857	.	-	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=NA12877_ch_T0001772;gene_id=NA12877_ch_G0000632;Parent=NA12877_ch_T0001772;transcript_name=NA12877_ch_T0001772;gene_name=UBE2Q2P4Y;ID=exon:NA12877_ch_T0001772:0;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24920858	24926809	.	-	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=NA12877_ch_T0001772;gene_id=NA12877_ch_G0000632;Parent=NA12877_ch_T0001772;transcript_name=NA12877_ch_T0001772;gene_name=UBE2Q2P4Y;ID=intron:NA12877_ch_T0001772:0;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24926810	24926911	.	-	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=NA12877_ch_T0001772;gene_id=NA12877_ch_G0000632;Parent=NA12877_ch_T0001772;transcript_name=NA12877_ch_T0001772;gene_name=UBE2Q2P4Y;ID=exon:NA12877_ch_T0001772:1;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24963353	24980521	.	+	.	source_gene_common_name=ENSG00000293927;source_gene=ENSG00000293927.1;gene_id=NA12877_ch_G0000633;gene_biotype=lncRNA;gene_name=ENSG00000293927;gene_sources=liftoff;ID=NA12877_ch_G0000633;Name=ENSG00000293927
NA12877_chrY	CAT	transcript	24963353	24980521	1000	+	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=NA12877_ch_T0001773;gene_id=NA12877_ch_G0000633;Parent=NA12877_ch_G0000633;transcript_name=NA12877_ch_T0001773;gene_name=ENSG00000293927;ID=NA12877_ch_T0001773;Name=ENSG00000293927
NA12877_chrY	CAT	exon	24963353	24963451	.	+	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=NA12877_ch_T0001773;gene_id=NA12877_ch_G0000633;Parent=NA12877_ch_T0001773;transcript_name=NA12877_ch_T0001773;gene_name=ENSG00000293927;ID=exon:NA12877_ch_T0001773:0;Name=ENSG00000293927;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24963452	24970992	.	+	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=NA12877_ch_T0001773;gene_id=NA12877_ch_G0000633;Parent=NA12877_ch_T0001773;transcript_name=NA12877_ch_T0001773;gene_name=ENSG00000293927;ID=intron:NA12877_ch_T0001773:0;Name=ENSG00000293927;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24970993	24971161	.	+	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=NA12877_ch_T0001773;gene_id=NA12877_ch_G0000633;Parent=NA12877_ch_T0001773;transcript_name=NA12877_ch_T0001773;gene_name=ENSG00000293927;ID=exon:NA12877_ch_T0001773:1;Name=ENSG00000293927;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24971162	24979199	.	+	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=NA12877_ch_T0001773;gene_id=NA12877_ch_G0000633;Parent=NA12877_ch_T0001773;transcript_name=NA12877_ch_T0001773;gene_name=ENSG00000293927;ID=intron:NA12877_ch_T0001773:1;Name=ENSG00000293927;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24979200	24980521	.	+	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=NA12877_ch_T0001773;gene_id=NA12877_ch_G0000633;Parent=NA12877_ch_T0001773;transcript_name=NA12877_ch_T0001773;gene_name=ENSG00000293927;ID=exon:NA12877_ch_T0001773:2;Name=ENSG00000293927;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24964175	24964956	.	+	.	source_gene_common_name=LINC00265-2P;source_gene=ENSG00000224827.1;alternative_source_transcripts=ENST00000413372.1;gene_id=NA12877_ch_G0000634;gene_biotype=processed_pseudogene;gene_name=LINC00265-2P;gene_sources=liftoff;ID=NA12877_ch_G0000634;Name=LINC00265-2P
NA12877_chrY	CAT	transcript	24964175	24964956	1000	+	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413372.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;alternative_source_transcripts=ENST00000413372.1;transcript_id=NA12877_ch_T0001774;gene_id=NA12877_ch_G0000634;Parent=NA12877_ch_G0000634;transcript_name=NA12877_ch_T0001774;gene_name=LINC00265-2P;ID=NA12877_ch_T0001774;Name=LINC00265-2P
NA12877_chrY	CAT	exon	24964175	24964956	.	+	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413372.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;alternative_source_transcripts=ENST00000413372.1;transcript_id=NA12877_ch_T0001774;gene_id=NA12877_ch_G0000634;Parent=NA12877_ch_T0001774;transcript_name=NA12877_ch_T0001774;gene_name=LINC00265-2P;ID=exon:NA12877_ch_T0001774:0;Name=LINC00265-2P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24966267	24969071	.	-	.	source_gene_common_name=CICP2;source_gene=ENSG00000233740.1;alternative_source_transcripts=ENST00000420675.1;gene_id=NA12877_ch_G0000635;gene_biotype=processed_pseudogene;gene_name=CICP2;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000635;Name=CICP2
NA12877_chrY	CAT	transcript	24966267	24969071	1000	-	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=transMap;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;alternative_source_transcripts=ENST00000420675.1;transcript_id=NA12877_ch_T0001775;gene_id=NA12877_ch_G0000635;Parent=NA12877_ch_G0000635;transcript_name=NA12877_ch_T0001775;gene_name=CICP2;ID=NA12877_ch_T0001775;Name=CICP2
NA12877_chrY	CAT	exon	24966267	24966393	.	-	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=transMap;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;alternative_source_transcripts=ENST00000420675.1;transcript_id=NA12877_ch_T0001775;gene_id=NA12877_ch_G0000635;Parent=NA12877_ch_T0001775;transcript_name=NA12877_ch_T0001775;gene_name=CICP2;ID=exon:NA12877_ch_T0001775:0;Name=CICP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24966394	24966803	.	-	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=transMap;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;alternative_source_transcripts=ENST00000420675.1;transcript_id=NA12877_ch_T0001775;gene_id=NA12877_ch_G0000635;Parent=NA12877_ch_T0001775;transcript_name=NA12877_ch_T0001775;gene_name=CICP2;ID=intron:NA12877_ch_T0001775:0;Name=CICP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24966804	24969071	.	-	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=transMap;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;alternative_source_transcripts=ENST00000420675.1;transcript_id=NA12877_ch_T0001775;gene_id=NA12877_ch_G0000635;Parent=NA12877_ch_T0001775;transcript_name=NA12877_ch_T0001775;gene_name=CICP2;ID=exon:NA12877_ch_T0001775:1;Name=CICP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	24966267	24969071	1000	-	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=NA12877_ch_T0001776;gene_id=NA12877_ch_G0000635;Parent=NA12877_ch_G0000635;transcript_name=NA12877_ch_T0001776;gene_name=CICP2;ID=NA12877_ch_T0001776;Name=CICP2
NA12877_chrY	CAT	exon	24966267	24966393	.	-	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=NA12877_ch_T0001776;gene_id=NA12877_ch_G0000635;Parent=NA12877_ch_T0001776;transcript_name=NA12877_ch_T0001776;gene_name=CICP2;ID=exon:NA12877_ch_T0001776:0;Name=CICP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24966394	24966803	.	-	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=NA12877_ch_T0001776;gene_id=NA12877_ch_G0000635;Parent=NA12877_ch_T0001776;transcript_name=NA12877_ch_T0001776;gene_name=CICP2;ID=intron:NA12877_ch_T0001776:0;Name=CICP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24966804	24967225	.	-	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=NA12877_ch_T0001776;gene_id=NA12877_ch_G0000635;Parent=NA12877_ch_T0001776;transcript_name=NA12877_ch_T0001776;gene_name=CICP2;ID=exon:NA12877_ch_T0001776:1;Name=CICP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	24967226	24967291	.	-	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=NA12877_ch_T0001776;gene_id=NA12877_ch_G0000635;Parent=NA12877_ch_T0001776;transcript_name=NA12877_ch_T0001776;gene_name=CICP2;ID=intron:NA12877_ch_T0001776:1;Name=CICP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	24967292	24969071	.	-	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=NA12877_ch_T0001776;gene_id=NA12877_ch_G0000635;Parent=NA12877_ch_T0001776;transcript_name=NA12877_ch_T0001776;gene_name=CICP2;ID=exon:NA12877_ch_T0001776:2;Name=CICP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	24970993	24971161	.	+	.	source_gene_common_name=SEPTIN14P22;source_gene=ENSG00000248792.2;gene_id=NA12877_ch_G0000636;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=SEPTIN14P22;gene_sources=liftoff;ID=NA12877_ch_G0000636;Name=SEPTIN14P22
NA12877_chrY	CAT	transcript	24970993	24971161	1000	+	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;transcript_id=NA12877_ch_T0001777;gene_id=NA12877_ch_G0000636;Parent=NA12877_ch_G0000636;transcript_name=NA12877_ch_T0001777;gene_name=SEPTIN14P22;ID=NA12877_ch_T0001777;Name=SEPTIN14P22
NA12877_chrY	CAT	exon	24970993	24971161	.	+	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;transcript_id=NA12877_ch_T0001777;gene_id=NA12877_ch_G0000636;Parent=NA12877_ch_T0001777;transcript_name=NA12877_ch_T0001777;gene_name=SEPTIN14P22;ID=exon:NA12877_ch_T0001777:0;Name=SEPTIN14P22;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25000502	25009583	.	-	.	source_gene_common_name=ENSG00000306111;source_gene=ENSG00000306111.1;alternative_source_transcripts=ENST00000815376.1,ENST00000815376.1;gene_id=NA12877_ch_G0000637;gene_biotype=lncRNA;gene_name=ENSG00000306111;gene_sources=liftoff;ID=NA12877_ch_G0000637;Name=ENSG00000306111
NA12877_chrY	CAT	transcript	25000502	25009583	1000	-	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1,ENST00000815376.1;transcript_id=NA12877_ch_T0001778;gene_id=NA12877_ch_G0000637;Parent=NA12877_ch_G0000637;transcript_name=NA12877_ch_T0001778;gene_name=ENSG00000306111;ID=NA12877_ch_T0001778;Name=ENSG00000306111
NA12877_chrY	CAT	exon	25000502	25001594	.	-	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1,ENST00000815376.1;transcript_id=NA12877_ch_T0001778;gene_id=NA12877_ch_G0000637;Parent=NA12877_ch_T0001778;transcript_name=NA12877_ch_T0001778;gene_name=ENSG00000306111;ID=exon:NA12877_ch_T0001778:0;Name=ENSG00000306111;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25001595	25009409	.	-	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1,ENST00000815376.1;transcript_id=NA12877_ch_T0001778;gene_id=NA12877_ch_G0000637;Parent=NA12877_ch_T0001778;transcript_name=NA12877_ch_T0001778;gene_name=ENSG00000306111;ID=intron:NA12877_ch_T0001778:0;Name=ENSG00000306111;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25009410	25009583	.	-	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1,ENST00000815376.1;transcript_id=NA12877_ch_T0001778;gene_id=NA12877_ch_G0000637;Parent=NA12877_ch_T0001778;transcript_name=NA12877_ch_T0001778;gene_name=ENSG00000306111;ID=exon:NA12877_ch_T0001778:1;Name=ENSG00000306111;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25008726	25009506	1000	-	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1,ENST00000815377.1;transcript_id=NA12877_ch_T0001779;gene_id=NA12877_ch_G0000637;Parent=NA12877_ch_G0000637;transcript_name=NA12877_ch_T0001779;gene_name=ENSG00000306111;ID=NA12877_ch_T0001779;Name=ENSG00000306111
NA12877_chrY	CAT	exon	25008726	25008965	.	-	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1,ENST00000815377.1;transcript_id=NA12877_ch_T0001779;gene_id=NA12877_ch_G0000637;Parent=NA12877_ch_T0001779;transcript_name=NA12877_ch_T0001779;gene_name=ENSG00000306111;ID=exon:NA12877_ch_T0001779:0;Name=ENSG00000306111;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25008966	25009409	.	-	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1,ENST00000815377.1;transcript_id=NA12877_ch_T0001779;gene_id=NA12877_ch_G0000637;Parent=NA12877_ch_T0001779;transcript_name=NA12877_ch_T0001779;gene_name=ENSG00000306111;ID=intron:NA12877_ch_T0001779:0;Name=ENSG00000306111;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25009410	25009506	.	-	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1,ENST00000815377.1;transcript_id=NA12877_ch_T0001779;gene_id=NA12877_ch_G0000637;Parent=NA12877_ch_T0001779;transcript_name=NA12877_ch_T0001779;gene_name=ENSG00000306111;ID=exon:NA12877_ch_T0001779:1;Name=ENSG00000306111;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25050274	25050348	.	-	.	source_gene_common_name=ENSG00000279274;source_gene=ENSG00000279274.2;alternative_source_transcripts=ENST00000624575.2;gene_id=NA12877_ch_G0000638;gene_biotype=processed_pseudogene;gene_name=ENSG00000279274;gene_sources=liftoff;ID=NA12877_ch_G0000638;Name=ENSG00000279274
NA12877_chrY	CAT	transcript	25050274	25050348	1000	-	.	source_transcript=ENST00000624575.2;source_transcript_name=ENST00000624575;source_gene=ENSG00000279274.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279274.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624575.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624575.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279274;alternative_source_transcripts=ENST00000624575.2;transcript_id=NA12877_ch_T0001780;gene_id=NA12877_ch_G0000638;Parent=NA12877_ch_G0000638;transcript_name=NA12877_ch_T0001780;gene_name=ENSG00000279274;ID=NA12877_ch_T0001780;Name=ENSG00000279274
NA12877_chrY	CAT	exon	25050274	25050348	.	-	.	source_transcript=ENST00000624575.2;source_transcript_name=ENST00000624575;source_gene=ENSG00000279274.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279274.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624575.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624575.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279274;alternative_source_transcripts=ENST00000624575.2;transcript_id=NA12877_ch_T0001780;gene_id=NA12877_ch_G0000638;Parent=NA12877_ch_T0001780;transcript_name=NA12877_ch_T0001780;gene_name=ENSG00000279274;ID=exon:NA12877_ch_T0001780:0;Name=ENSG00000279274;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25084543	25091465	.	-	.	source_gene_common_name=RBMY2XP;source_gene=ENSG00000234399.1;alternative_source_transcripts=ENST00000447471.1;gene_id=NA12877_ch_G0000639;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2XP;gene_sources=liftoff;ID=NA12877_ch_G0000639;Name=RBMY2XP
NA12877_chrY	CAT	transcript	25084543	25091465	1000	-	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=NA12877_ch_T0001781;gene_id=NA12877_ch_G0000639;Parent=NA12877_ch_G0000639;transcript_name=NA12877_ch_T0001781;gene_name=RBMY2XP;ID=NA12877_ch_T0001781;Name=RBMY2XP
NA12877_chrY	CAT	exon	25084543	25084844	.	-	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=NA12877_ch_T0001781;gene_id=NA12877_ch_G0000639;Parent=NA12877_ch_T0001781;transcript_name=NA12877_ch_T0001781;gene_name=RBMY2XP;ID=exon:NA12877_ch_T0001781:0;Name=RBMY2XP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25084845	25085257	.	-	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=NA12877_ch_T0001781;gene_id=NA12877_ch_G0000639;Parent=NA12877_ch_T0001781;transcript_name=NA12877_ch_T0001781;gene_name=RBMY2XP;ID=intron:NA12877_ch_T0001781:0;Name=RBMY2XP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25085258	25085346	.	-	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=NA12877_ch_T0001781;gene_id=NA12877_ch_G0000639;Parent=NA12877_ch_T0001781;transcript_name=NA12877_ch_T0001781;gene_name=RBMY2XP;ID=exon:NA12877_ch_T0001781:1;Name=RBMY2XP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25085347	25085427	.	-	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=NA12877_ch_T0001781;gene_id=NA12877_ch_G0000639;Parent=NA12877_ch_T0001781;transcript_name=NA12877_ch_T0001781;gene_name=RBMY2XP;ID=intron:NA12877_ch_T0001781:1;Name=RBMY2XP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25085428	25085538	.	-	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=NA12877_ch_T0001781;gene_id=NA12877_ch_G0000639;Parent=NA12877_ch_T0001781;transcript_name=NA12877_ch_T0001781;gene_name=RBMY2XP;ID=exon:NA12877_ch_T0001781:2;Name=RBMY2XP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25085539	25088274	.	-	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=NA12877_ch_T0001781;gene_id=NA12877_ch_G0000639;Parent=NA12877_ch_T0001781;transcript_name=NA12877_ch_T0001781;gene_name=RBMY2XP;ID=intron:NA12877_ch_T0001781:2;Name=RBMY2XP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25088275	25088456	.	-	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=NA12877_ch_T0001781;gene_id=NA12877_ch_G0000639;Parent=NA12877_ch_T0001781;transcript_name=NA12877_ch_T0001781;gene_name=RBMY2XP;ID=exon:NA12877_ch_T0001781:3;Name=RBMY2XP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25088457	25090844	.	-	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=NA12877_ch_T0001781;gene_id=NA12877_ch_G0000639;Parent=NA12877_ch_T0001781;transcript_name=NA12877_ch_T0001781;gene_name=RBMY2XP;ID=intron:NA12877_ch_T0001781:3;Name=RBMY2XP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25090845	25090946	.	-	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=NA12877_ch_T0001781;gene_id=NA12877_ch_G0000639;Parent=NA12877_ch_T0001781;transcript_name=NA12877_ch_T0001781;gene_name=RBMY2XP;ID=exon:NA12877_ch_T0001781:4;Name=RBMY2XP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25090947	25091356	.	-	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=NA12877_ch_T0001781;gene_id=NA12877_ch_G0000639;Parent=NA12877_ch_T0001781;transcript_name=NA12877_ch_T0001781;gene_name=RBMY2XP;ID=intron:NA12877_ch_T0001781:4;Name=RBMY2XP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25091357	25091465	.	-	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=NA12877_ch_T0001781;gene_id=NA12877_ch_G0000639;Parent=NA12877_ch_T0001781;transcript_name=NA12877_ch_T0001781;gene_name=RBMY2XP;ID=exon:NA12877_ch_T0001781:5;Name=RBMY2XP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25138790	25143880	.	-	.	source_gene_common_name=ENSG00000308317;source_gene=ENSG00000308317.1;alternative_source_transcripts=ENST00000833217.1;gene_id=NA12877_ch_G0000640;gene_biotype=lncRNA;gene_name=ENSG00000308317;gene_sources=liftoff;ID=NA12877_ch_G0000640;Name=ENSG00000308317
NA12877_chrY	CAT	transcript	25138790	25143880	1000	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=NA12877_ch_T0001782;gene_id=NA12877_ch_G0000640;Parent=NA12877_ch_G0000640;transcript_name=NA12877_ch_T0001782;gene_name=ENSG00000308317;ID=NA12877_ch_T0001782;Name=ENSG00000308317
NA12877_chrY	CAT	exon	25138790	25139131	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=NA12877_ch_T0001782;gene_id=NA12877_ch_G0000640;Parent=NA12877_ch_T0001782;transcript_name=NA12877_ch_T0001782;gene_name=ENSG00000308317;ID=exon:NA12877_ch_T0001782:0;Name=ENSG00000308317;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25139132	25143783	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=NA12877_ch_T0001782;gene_id=NA12877_ch_G0000640;Parent=NA12877_ch_T0001782;transcript_name=NA12877_ch_T0001782;gene_name=ENSG00000308317;ID=intron:NA12877_ch_T0001782:0;Name=ENSG00000308317;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25143784	25143880	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=NA12877_ch_T0001782;gene_id=NA12877_ch_G0000640;Parent=NA12877_ch_T0001782;transcript_name=NA12877_ch_T0001782;gene_name=ENSG00000308317;ID=exon:NA12877_ch_T0001782:1;Name=ENSG00000308317;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25173271	25174402	.	+	.	source_gene_common_name=TTTY17B;source_gene=ENSG00000227439.1;alternative_source_transcripts=ENST00000441906.1;gene_id=NA12877_ch_G0000641;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=NA12877_ch_G0000641;Name=TTTY17B
NA12877_chrY	CAT	transcript	25173271	25174402	1000	+	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000441906.1;transcript_id=NA12877_ch_T0001783;gene_id=NA12877_ch_G0000641;Parent=NA12877_ch_G0000641;transcript_name=NA12877_ch_T0001783;gene_name=TTTY17B;ID=NA12877_ch_T0001783;Name=TTTY17B
NA12877_chrY	CAT	exon	25173271	25173330	.	+	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000441906.1;transcript_id=NA12877_ch_T0001783;gene_id=NA12877_ch_G0000641;Parent=NA12877_ch_T0001783;transcript_name=NA12877_ch_T0001783;gene_name=TTTY17B;ID=exon:NA12877_ch_T0001783:0;Name=TTTY17B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25173331	25174296	.	+	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000441906.1;transcript_id=NA12877_ch_T0001783;gene_id=NA12877_ch_G0000641;Parent=NA12877_ch_T0001783;transcript_name=NA12877_ch_T0001783;gene_name=TTTY17B;ID=intron:NA12877_ch_T0001783:0;Name=TTTY17B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25174297	25174402	.	+	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000441906.1;transcript_id=NA12877_ch_T0001783;gene_id=NA12877_ch_G0000641;Parent=NA12877_ch_T0001783;transcript_name=NA12877_ch_T0001783;gene_name=TTTY17B;ID=exon:NA12877_ch_T0001783:1;Name=TTTY17B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25182648	25183523	.	-	.	source_gene_common_name=TRIM60P5Y;source_gene=ENSG00000224210.1;alternative_source_transcripts=ENST00000413946.1;gene_id=NA12877_ch_G0000642;gene_biotype=processed_pseudogene;gene_name=TRIM60P5Y;gene_sources=liftoff;ID=NA12877_ch_G0000642;Name=TRIM60P5Y
NA12877_chrY	CAT	transcript	25182648	25183523	1000	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;alternative_source_transcripts=ENST00000413946.1;transcript_id=NA12877_ch_T0001784;gene_id=NA12877_ch_G0000642;Parent=NA12877_ch_G0000642;transcript_name=NA12877_ch_T0001784;gene_name=TRIM60P5Y;ID=NA12877_ch_T0001784;Name=TRIM60P5Y
NA12877_chrY	CAT	exon	25182648	25182946	.	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;alternative_source_transcripts=ENST00000413946.1;transcript_id=NA12877_ch_T0001784;gene_id=NA12877_ch_G0000642;Parent=NA12877_ch_T0001784;transcript_name=NA12877_ch_T0001784;gene_name=TRIM60P5Y;ID=exon:NA12877_ch_T0001784:0;Name=TRIM60P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25182947	25183247	.	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;alternative_source_transcripts=ENST00000413946.1;transcript_id=NA12877_ch_T0001784;gene_id=NA12877_ch_G0000642;Parent=NA12877_ch_T0001784;transcript_name=NA12877_ch_T0001784;gene_name=TRIM60P5Y;ID=intron:NA12877_ch_T0001784:0;Name=TRIM60P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25183248	25183523	.	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;alternative_source_transcripts=ENST00000413946.1;transcript_id=NA12877_ch_T0001784;gene_id=NA12877_ch_G0000642;Parent=NA12877_ch_T0001784;transcript_name=NA12877_ch_T0001784;gene_name=TRIM60P5Y;ID=exon:NA12877_ch_T0001784:1;Name=TRIM60P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25188203	25189445	.	-	.	source_gene_common_name=ZNF736P12Y;source_gene=ENSG00000232003.2;alternative_source_transcripts=ENST00000443152.1,ENST00000443152.1;gene_id=NA12877_ch_G0000643;gene_biotype=processed_pseudogene;gene_name=ZNF736P12Y;gene_sources=liftoff;ID=NA12877_ch_G0000643;Name=ZNF736P12Y
NA12877_chrY	CAT	transcript	25188203	25189445	1000	-	.	source_transcript=ENST00000443152.1;source_transcript_name=ZNF736P12Y-201;source_gene=ENSG00000232003.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232003.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443152.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P12Y;alternative_source_transcripts=ENST00000443152.1,ENST00000443152.1;transcript_id=NA12877_ch_T0001785;gene_id=NA12877_ch_G0000643;Parent=NA12877_ch_G0000643;transcript_name=NA12877_ch_T0001785;gene_name=ZNF736P12Y;ID=NA12877_ch_T0001785;Name=ZNF736P12Y
NA12877_chrY	CAT	exon	25188203	25189445	.	-	.	source_transcript=ENST00000443152.1;source_transcript_name=ZNF736P12Y-201;source_gene=ENSG00000232003.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232003.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P12Y;alternative_source_transcripts=ENST00000443152.1,ENST00000443152.1;transcript_id=NA12877_ch_T0001785;gene_id=NA12877_ch_G0000643;Parent=NA12877_ch_T0001785;transcript_name=NA12877_ch_T0001785;gene_name=ZNF736P12Y;ID=exon:NA12877_ch_T0001785:0;Name=ZNF736P12Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25258144	25294963	.	+	.	source_gene_common_name=TTTY4B;source_gene=ENSG00000235412.1;alternative_source_transcripts=ENST00000420149.1;gene_id=NA12877_ch_G0000644;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=NA12877_ch_G0000644;Name=TTTY4B
NA12877_chrY	CAT	transcript	25258144	25294963	1000	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=NA12877_ch_T0001786;gene_id=NA12877_ch_G0000644;Parent=NA12877_ch_G0000644;transcript_name=NA12877_ch_T0001786;gene_name=TTTY4B;ID=NA12877_ch_T0001786;Name=TTTY4B
NA12877_chrY	CAT	exon	25258144	25258304	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=NA12877_ch_T0001786;gene_id=NA12877_ch_G0000644;Parent=NA12877_ch_T0001786;transcript_name=NA12877_ch_T0001786;gene_name=TTTY4B;ID=exon:NA12877_ch_T0001786:0;Name=TTTY4B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25258305	25285306	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=NA12877_ch_T0001786;gene_id=NA12877_ch_G0000644;Parent=NA12877_ch_T0001786;transcript_name=NA12877_ch_T0001786;gene_name=TTTY4B;ID=intron:NA12877_ch_T0001786:0;Name=TTTY4B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25285307	25285382	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=NA12877_ch_T0001786;gene_id=NA12877_ch_G0000644;Parent=NA12877_ch_T0001786;transcript_name=NA12877_ch_T0001786;gene_name=TTTY4B;ID=exon:NA12877_ch_T0001786:1;Name=TTTY4B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25285383	25287186	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=NA12877_ch_T0001786;gene_id=NA12877_ch_G0000644;Parent=NA12877_ch_T0001786;transcript_name=NA12877_ch_T0001786;gene_name=TTTY4B;ID=intron:NA12877_ch_T0001786:1;Name=TTTY4B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25287187	25287294	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=NA12877_ch_T0001786;gene_id=NA12877_ch_G0000644;Parent=NA12877_ch_T0001786;transcript_name=NA12877_ch_T0001786;gene_name=TTTY4B;ID=exon:NA12877_ch_T0001786:2;Name=TTTY4B;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25287295	25293962	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=NA12877_ch_T0001786;gene_id=NA12877_ch_G0000644;Parent=NA12877_ch_T0001786;transcript_name=NA12877_ch_T0001786;gene_name=TTTY4B;ID=intron:NA12877_ch_T0001786:2;Name=TTTY4B;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25293963	25294963	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=NA12877_ch_T0001786;gene_id=NA12877_ch_G0000644;Parent=NA12877_ch_T0001786;transcript_name=NA12877_ch_T0001786;gene_name=TTTY4B;ID=exon:NA12877_ch_T0001786:3;Name=TTTY4B;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25295498	25327145	.	+	.	source_gene_common_name=BPY2C;source_gene=ENSG00000185894.8;alternative_source_transcripts=ENST00000602770.5;gene_id=NA12877_ch_G0000645;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff;ID=NA12877_ch_G0000645;Name=BPY2C
NA12877_chrY	CAT	transcript	25295498	25314055	100	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602770.5;transcript_id=NA12877_ch_T0001787;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_G0000645;transcript_name=NA12877_ch_T0001787;gene_name=BPY2C;ID=NA12877_ch_T0001787;Name=BPY2C
NA12877_chrY	CAT	exon	25295498	25295653	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602770.5;transcript_id=NA12877_ch_T0001787;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001787;transcript_name=NA12877_ch_T0001787;gene_name=BPY2C;ID=exon:NA12877_ch_T0001787:0;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25295654	25305826	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602770.5;transcript_id=NA12877_ch_T0001787;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001787;transcript_name=NA12877_ch_T0001787;gene_name=BPY2C;ID=intron:NA12877_ch_T0001787:0;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25305827	25305895	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602770.5;transcript_id=NA12877_ch_T0001787;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001787;transcript_name=NA12877_ch_T0001787;gene_name=BPY2C;ID=exon:NA12877_ch_T0001787:1;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25305896	25306247	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602770.5;transcript_id=NA12877_ch_T0001787;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001787;transcript_name=NA12877_ch_T0001787;gene_name=BPY2C;ID=intron:NA12877_ch_T0001787:1;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25306248	25306370	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602770.5;transcript_id=NA12877_ch_T0001787;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001787;transcript_name=NA12877_ch_T0001787;gene_name=BPY2C;ID=exon:NA12877_ch_T0001787:2;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25306371	25309435	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602770.5;transcript_id=NA12877_ch_T0001787;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001787;transcript_name=NA12877_ch_T0001787;gene_name=BPY2C;ID=intron:NA12877_ch_T0001787:2;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25309436	25309572	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602770.5;transcript_id=NA12877_ch_T0001787;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001787;transcript_name=NA12877_ch_T0001787;gene_name=BPY2C;ID=exon:NA12877_ch_T0001787:3;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25309573	25313981	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602770.5;transcript_id=NA12877_ch_T0001787;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001787;transcript_name=NA12877_ch_T0001787;gene_name=BPY2C;ID=intron:NA12877_ch_T0001787:3;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25313982	25314055	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602770.5;transcript_id=NA12877_ch_T0001787;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001787;transcript_name=NA12877_ch_T0001787;gene_name=BPY2C;ID=exon:NA12877_ch_T0001787:4;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25314023	25314055	.	+	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602770.5;transcript_id=NA12877_ch_T0001787;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001787;transcript_name=NA12877_ch_T0001787;gene_name=BPY2C;ID=CDS:NA12877_ch_T0001787:0;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25314023	25314025	.	+	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602770.5;transcript_id=NA12877_ch_T0001787;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001787;transcript_name=NA12877_ch_T0001787;gene_name=BPY2C;ID=start_codon:NA12877_ch_T0001787;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25305942	25327145	100	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_G0000645;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=NA12877_ch_T0001788;Name=BPY2C
NA12877_chrY	CAT	exon	25305942	25305972	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=exon:NA12877_ch_T0001788:0;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25305973	25306247	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=intron:NA12877_ch_T0001788:0;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25306248	25306370	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=exon:NA12877_ch_T0001788:1;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25306371	25309435	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=intron:NA12877_ch_T0001788:1;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25309436	25309572	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=exon:NA12877_ch_T0001788:2;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25309573	25313981	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=intron:NA12877_ch_T0001788:2;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25313982	25314100	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=exon:NA12877_ch_T0001788:3;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25314023	25314100	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=CDS:NA12877_ch_T0001788:0;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25314023	25314025	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=start_codon:NA12877_ch_T0001788;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25314101	25316159	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=intron:NA12877_ch_T0001788:3;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25316160	25316277	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=exon:NA12877_ch_T0001788:4;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25316160	25316277	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=CDS:NA12877_ch_T0001788:1;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25316278	25319131	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=intron:NA12877_ch_T0001788:4;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25319132	25319237	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=exon:NA12877_ch_T0001788:5;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25319132	25319237	.	+	2	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=CDS:NA12877_ch_T0001788:2;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25319238	25319929	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=intron:NA12877_ch_T0001788:5;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25319930	25320054	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=exon:NA12877_ch_T0001788:6;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25319930	25319948	.	+	1	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=CDS:NA12877_ch_T0001788:3;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25319946	25319948	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=stop_codon:NA12877_ch_T0001788;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25320055	25326604	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=intron:NA12877_ch_T0001788:6;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25326605	25326729	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=exon:NA12877_ch_T0001788:7;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25326730	25326823	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=intron:NA12877_ch_T0001788:7;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25326824	25327145	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000382392.5;transcript_id=NA12877_ch_T0001788;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001788;transcript_name=NA12877_ch_T0001788;gene_name=BPY2C;ID=exon:NA12877_ch_T0001788:8;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25305966	25327086	1000	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_G0000645;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=NA12877_ch_T0001789;Name=BPY2C
NA12877_chrY	CAT	exon	25305966	25305972	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=exon:NA12877_ch_T0001789:0;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25305973	25306247	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=intron:NA12877_ch_T0001789:0;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25306248	25306370	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=exon:NA12877_ch_T0001789:1;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25306371	25309435	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=intron:NA12877_ch_T0001789:1;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25309436	25309572	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=exon:NA12877_ch_T0001789:2;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25309573	25313981	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=intron:NA12877_ch_T0001789:2;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25313982	25314100	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=exon:NA12877_ch_T0001789:3;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25314101	25319131	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=intron:NA12877_ch_T0001789:3;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25319132	25319237	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=exon:NA12877_ch_T0001789:4;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25319238	25319929	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=intron:NA12877_ch_T0001789:4;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25319930	25320054	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=exon:NA12877_ch_T0001789:5;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25320055	25326604	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=intron:NA12877_ch_T0001789:5;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25326605	25326734	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=exon:NA12877_ch_T0001789:6;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25326735	25326823	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=intron:NA12877_ch_T0001789:6;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25326824	25327086	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000602549.1;transcript_id=NA12877_ch_T0001789;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001789;transcript_name=NA12877_ch_T0001789;gene_name=BPY2C;ID=exon:NA12877_ch_T0001789:7;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25314023	25319948	100	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_G0000645;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=NA12877_ch_T0001790;Name=BPY2C
NA12877_chrY	CAT	exon	25314023	25314100	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=exon:NA12877_ch_T0001790:0;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25314023	25314100	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=CDS:NA12877_ch_T0001790:0;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25314023	25314025	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=start_codon:NA12877_ch_T0001790;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25314101	25316159	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=intron:NA12877_ch_T0001790:0;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25316160	25316277	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=exon:NA12877_ch_T0001790:1;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25316160	25316277	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=CDS:NA12877_ch_T0001790:1;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25316278	25319131	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=intron:NA12877_ch_T0001790:1;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25319132	25319237	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=exon:NA12877_ch_T0001790:2;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25319132	25319237	.	+	2	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=CDS:NA12877_ch_T0001790:2;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25319238	25319929	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=intron:NA12877_ch_T0001790:2;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25319930	25319948	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=exon:NA12877_ch_T0001790:3;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25319930	25319948	.	+	1	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=CDS:NA12877_ch_T0001790:3;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25319946	25319948	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;alternative_source_transcripts=ENST00000615850.1;transcript_id=NA12877_ch_T0001790;gene_id=NA12877_ch_G0000645;Parent=NA12877_ch_T0001790;transcript_name=NA12877_ch_T0001790;gene_name=BPY2C;ID=stop_codon:NA12877_ch_T0001790;Name=BPY2C;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25338743	25339547	.	+	.	source_gene_common_name=ZNF736P5Y;source_gene=ENSG00000230819.1;gene_id=NA12877_ch_G0000646;gene_biotype=processed_pseudogene;gene_name=ZNF736P5Y;gene_sources=liftoff;ID=NA12877_ch_G0000646;Name=ZNF736P5Y
NA12877_chrY	CAT	transcript	25338743	25339547	1000	+	.	source_transcript=ENST00000451173.1;source_transcript_name=ZNF736P5Y-201;source_gene=ENSG00000230819.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230819.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451173.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P5Y;transcript_id=NA12877_ch_T0001791;gene_id=NA12877_ch_G0000646;Parent=NA12877_ch_G0000646;transcript_name=NA12877_ch_T0001791;gene_name=ZNF736P5Y;ID=NA12877_ch_T0001791;Name=ZNF736P5Y
NA12877_chrY	CAT	exon	25338743	25339547	.	+	.	source_transcript=ENST00000451173.1;source_transcript_name=ZNF736P5Y-201;source_gene=ENSG00000230819.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230819.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P5Y;transcript_id=NA12877_ch_T0001791;gene_id=NA12877_ch_G0000646;Parent=NA12877_ch_T0001791;transcript_name=NA12877_ch_T0001791;gene_name=ZNF736P5Y;ID=exon:NA12877_ch_T0001791:0;Name=ZNF736P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25347277	25348346	.	+	.	source_gene_common_name=ENSG00000278197;source_gene=ENSG00000278197.1;gene_id=NA12877_ch_G0000647;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000278197;gene_sources=liftoff;ID=NA12877_ch_G0000647;Name=ENSG00000278197
NA12877_chrY	CAT	transcript	25347277	25348346	1000	+	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=NA12877_ch_T0001792;gene_id=NA12877_ch_G0000647;Parent=NA12877_ch_G0000647;transcript_name=NA12877_ch_T0001792;gene_name=ENSG00000278197;ID=NA12877_ch_T0001792;Name=ENSG00000278197
NA12877_chrY	CAT	exon	25347277	25347503	.	+	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=NA12877_ch_T0001792;gene_id=NA12877_ch_G0000647;Parent=NA12877_ch_T0001792;transcript_name=NA12877_ch_T0001792;gene_name=ENSG00000278197;ID=exon:NA12877_ch_T0001792:0;Name=ENSG00000278197;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25347504	25347824	.	+	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=NA12877_ch_T0001792;gene_id=NA12877_ch_G0000647;Parent=NA12877_ch_T0001792;transcript_name=NA12877_ch_T0001792;gene_name=ENSG00000278197;ID=intron:NA12877_ch_T0001792:0;Name=ENSG00000278197;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25347825	25348346	.	+	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=NA12877_ch_T0001792;gene_id=NA12877_ch_G0000647;Parent=NA12877_ch_T0001792;transcript_name=NA12877_ch_T0001792;gene_name=ENSG00000278197;ID=exon:NA12877_ch_T0001792:1;Name=ENSG00000278197;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25371569	25372844	.	+	.	source_gene_common_name=ZNF736P1Y;source_gene=ENSG00000223978.1;alternative_source_transcripts=ENST00000440402.1;gene_id=NA12877_ch_G0000648;gene_biotype=processed_pseudogene;gene_name=ZNF736P1Y;gene_sources=liftoff;ID=NA12877_ch_G0000648;Name=ZNF736P1Y
NA12877_chrY	CAT	transcript	25371569	25372844	1000	+	.	source_transcript=ENST00000440402.1;source_transcript_name=ZNF736P1Y-201;source_gene=ENSG00000223978.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223978.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440402.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440402.1;transcript_score=199.922;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P1Y;alternative_source_transcripts=ENST00000440402.1;transcript_id=NA12877_ch_T0001793;gene_id=NA12877_ch_G0000648;Parent=NA12877_ch_G0000648;transcript_name=NA12877_ch_T0001793;gene_name=ZNF736P1Y;ID=NA12877_ch_T0001793;Name=ZNF736P1Y
NA12877_chrY	CAT	exon	25371569	25372844	.	+	.	source_transcript=ENST00000440402.1;source_transcript_name=ZNF736P1Y-201;source_gene=ENSG00000223978.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223978.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440402.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440402.1;transcript_score=199.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P1Y;alternative_source_transcripts=ENST00000440402.1;transcript_id=NA12877_ch_T0001793;gene_id=NA12877_ch_G0000648;Parent=NA12877_ch_T0001793;transcript_name=NA12877_ch_T0001793;gene_name=ZNF736P1Y;ID=exon:NA12877_ch_T0001793:0;Name=ZNF736P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25379722	25380863	.	+	.	source_gene_common_name=ENSG00000278602;source_gene=ENSG00000278602.1;gene_id=NA12877_ch_G0000649;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000278602;gene_sources=liftoff;ID=NA12877_ch_G0000649;Name=ENSG00000278602
NA12877_chrY	CAT	transcript	25379722	25380863	1000	+	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=NA12877_ch_T0001794;gene_id=NA12877_ch_G0000649;Parent=NA12877_ch_G0000649;transcript_name=NA12877_ch_T0001794;gene_name=ENSG00000278602;ID=NA12877_ch_T0001794;Name=ENSG00000278602
NA12877_chrY	CAT	exon	25379722	25379988	.	+	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=NA12877_ch_T0001794;gene_id=NA12877_ch_G0000649;Parent=NA12877_ch_T0001794;transcript_name=NA12877_ch_T0001794;gene_name=ENSG00000278602;ID=exon:NA12877_ch_T0001794:0;Name=ENSG00000278602;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25379989	25380339	.	+	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=NA12877_ch_T0001794;gene_id=NA12877_ch_G0000649;Parent=NA12877_ch_T0001794;transcript_name=NA12877_ch_T0001794;gene_name=ENSG00000278602;ID=intron:NA12877_ch_T0001794:0;Name=ENSG00000278602;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25380340	25380863	.	+	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=NA12877_ch_T0001794;gene_id=NA12877_ch_G0000649;Parent=NA12877_ch_T0001794;transcript_name=NA12877_ch_T0001794;gene_name=ENSG00000278602;ID=exon:NA12877_ch_T0001794:1;Name=ENSG00000278602;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25450999	25526567	.	-	.	source_gene_common_name=DAZ4;source_gene=ENSG00000205916.12;alternative_source_transcripts=ENST00000415508.6;gene_id=NA12877_ch_G0000650;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=liftoff;ID=NA12877_ch_G0000650;Name=DAZ4
NA12877_chrY	CAT	transcript	25450999	25526567	100	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_G0000650;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=NA12877_ch_T0001795;Name=DAZ4
NA12877_chrY	CAT	exon	25450999	25452855	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25452856	25456828	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25456829	25456927	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25456864	25456927	.	-	1	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25456864	25456866	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=stop_codon:NA12877_ch_T0001795;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25456928	25461499	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25461500	25461534	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25461500	25461534	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25461535	25462279	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25462280	25462351	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25462280	25462351	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25462352	25469433	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25469434	25469505	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25469434	25469505	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25469506	25471818	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25471819	25471890	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25471819	25471890	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25471891	25495893	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25495894	25495965	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25495894	25495965	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25495966	25503063	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25503064	25503135	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25503064	25503135	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25503136	25505506	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25505507	25505578	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25505507	25505578	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25505579	25517825	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25517826	25517965	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25517826	25517965	.	-	2	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25517966	25518054	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518055	25518118	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518055	25518118	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518119	25518554	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518555	25518606	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518555	25518606	.	-	1	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518607	25519166	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519167	25519258	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519167	25519258	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519259	25519532	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519533	25519679	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519533	25519679	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519680	25526280	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=intron:NA12877_ch_T0001795:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25526281	25526567	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=exon:NA12877_ch_T0001795:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25526281	25526283	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001795:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25526281	25526283	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000415508.6;transcript_id=NA12877_ch_T0001795;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001795;transcript_name=NA12877_ch_T0001795;gene_name=DAZ4;ID=start_codon:NA12877_ch_T0001795;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25450999	25526491	100	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_G0000650;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=NA12877_ch_T0001796;Name=DAZ4
NA12877_chrY	CAT	exon	25450999	25452855	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25452856	25456828	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25456829	25456927	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25456864	25456927	.	-	1	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25456864	25456866	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=stop_codon:NA12877_ch_T0001796;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25456928	25461499	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25461500	25461534	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25461500	25461534	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25461535	25462279	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25462280	25462351	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25462280	25462351	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25462352	25464663	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25464664	25464735	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25464664	25464735	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25464736	25467048	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25467049	25467120	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25467049	25467120	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25467121	25469433	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25469434	25469505	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25469434	25469505	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25469506	25471818	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25471819	25471890	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25471819	25471890	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25471891	25486363	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25486364	25486435	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25486364	25486435	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25486436	25488740	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25488741	25488812	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25488741	25488812	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25488813	25491120	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25491121	25491192	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25491121	25491192	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25491193	25493497	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25493498	25493569	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25493498	25493569	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25493570	25495893	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25495894	25495965	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25495894	25495965	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25495966	25498277	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25498278	25498349	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25498278	25498349	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25498350	25500673	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25500674	25500745	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25500674	25500745	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25500746	25503063	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25503064	25503135	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25503064	25503135	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25503136	25505506	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25505507	25505578	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25505507	25505578	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25505579	25506978	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25506979	25507118	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25506979	25507118	.	-	2	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25507119	25507207	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25507208	25507271	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25507208	25507271	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25507272	25507707	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25507708	25507759	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25507708	25507759	.	-	1	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25507760	25508319	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25508320	25508411	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25508320	25508411	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25508412	25508685	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25508686	25508832	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25508686	25508832	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25508833	25517825	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25517826	25517965	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:22;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25517826	25517965	.	-	2	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25517966	25518054	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:22;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518055	25518118	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:23;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518055	25518118	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:22;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518119	25518554	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:23;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518555	25518606	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:24;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518555	25518606	.	-	1	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:23;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518607	25519166	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:24;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519167	25519258	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:25;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519167	25519258	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:24;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519259	25519532	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:25;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519533	25519679	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:26;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519533	25519679	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:25;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519680	25526280	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=intron:NA12877_ch_T0001796:26;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25526281	25526491	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=exon:NA12877_ch_T0001796:27;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25526281	25526283	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001796:26;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25526281	25526283	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000682740.1;transcript_id=NA12877_ch_T0001796;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001796;transcript_name=NA12877_ch_T0001796;gene_name=DAZ4;ID=start_codon:NA12877_ch_T0001796;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25451003	25526493	100	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_G0000650;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=NA12877_ch_T0001797;Name=DAZ4
NA12877_chrY	CAT	exon	25451003	25452855	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25452856	25456828	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25456829	25456927	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25456864	25456927	.	-	1	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25456864	25456866	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=stop_codon:NA12877_ch_T0001797;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25456928	25461499	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25461500	25461534	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25461500	25461534	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25461535	25462279	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25462280	25462351	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25462280	25462351	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25462352	25486363	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25486364	25486435	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25486364	25486435	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25486436	25488740	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25488741	25488812	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25488741	25488812	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25488813	25491120	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25491121	25491192	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25491121	25491192	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25491193	25493497	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25493498	25493569	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25493498	25493569	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25493570	25495893	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25495894	25495965	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25495894	25495965	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25495966	25498277	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25498278	25498349	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25498278	25498349	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25498350	25500673	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25500674	25500745	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25500674	25500745	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25500746	25503063	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25503064	25503135	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25503064	25503135	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25503136	25505506	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25505507	25505578	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25505507	25505578	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25505579	25506978	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25506979	25507118	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25506979	25507118	.	-	2	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25507119	25507207	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25507208	25507271	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25507208	25507271	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25507272	25507707	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25507708	25507759	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25507708	25507759	.	-	1	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25507760	25508319	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25508320	25508411	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25508320	25508411	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25508412	25508685	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25508686	25508832	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25508686	25508832	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25508833	25517825	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25517826	25517965	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25517826	25517965	.	-	2	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25517966	25518054	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518055	25518118	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518055	25518118	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518119	25518554	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518555	25518606	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518555	25518606	.	-	1	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518607	25519166	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519167	25519258	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519167	25519258	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519259	25519532	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519533	25519679	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:22;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519533	25519679	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519680	25526280	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=intron:NA12877_ch_T0001797:22;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25526281	25526493	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=exon:NA12877_ch_T0001797:23;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25526281	25526283	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001797:22;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25526281	25526283	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382314.6;transcript_id=NA12877_ch_T0001797;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001797;transcript_name=NA12877_ch_T0001797;gene_name=DAZ4;ID=start_codon:NA12877_ch_T0001797;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25451003	25526493	100	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_G0000650;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=NA12877_ch_T0001798;Name=DAZ4
NA12877_chrY	CAT	exon	25451003	25452855	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25452856	25456828	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25456829	25456927	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25456864	25456927	.	-	1	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25456864	25456866	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=stop_codon:NA12877_ch_T0001798;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25456928	25461499	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25461500	25461534	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25461500	25461534	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25461535	25462279	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25462280	25462351	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25462280	25462351	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25462352	25491120	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25491121	25491192	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25491121	25491192	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25491193	25493497	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25493498	25493569	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25493498	25493569	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25493570	25495893	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25495894	25495965	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25495894	25495965	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25495966	25498277	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25498278	25498349	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25498278	25498349	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25498350	25500673	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25500674	25500745	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25500674	25500745	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25500746	25503063	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25503064	25503135	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25503064	25503135	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25503136	25505506	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25505507	25505578	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25505507	25505578	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25505579	25517825	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25517826	25517965	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25517826	25517965	.	-	2	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25517966	25518054	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518055	25518118	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518055	25518118	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518119	25518554	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518555	25518606	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518555	25518606	.	-	1	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518607	25519166	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519167	25519258	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519167	25519258	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519259	25519532	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519533	25519679	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519533	25519679	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519680	25526280	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=intron:NA12877_ch_T0001798:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25526281	25526493	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=exon:NA12877_ch_T0001798:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25526281	25526283	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001798:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25526281	25526283	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000449750.7;transcript_id=NA12877_ch_T0001798;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001798;transcript_name=NA12877_ch_T0001798;gene_name=DAZ4;ID=start_codon:NA12877_ch_T0001798;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25452356	25526476	100	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_G0000650;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=NA12877_ch_T0001799;Name=DAZ4
NA12877_chrY	CAT	exon	25452356	25452855	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25452856	25456828	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25456829	25456927	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25456864	25456927	.	-	1	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25456864	25456866	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=stop_codon:NA12877_ch_T0001799;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25456928	25461499	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25461500	25461534	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25461500	25461534	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25461535	25462279	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25462280	25462351	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25462280	25462351	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25462352	25464663	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25464664	25464735	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25464664	25464735	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25464736	25467048	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25467049	25467120	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25467049	25467120	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25467121	25469433	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25469434	25469505	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25469434	25469505	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25469506	25471818	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25471819	25471890	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25471819	25471890	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25471891	25486363	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25486364	25486435	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25486364	25486435	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25486436	25488740	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25488741	25488812	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25488741	25488812	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25488813	25491120	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25491121	25491192	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25491121	25491192	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25491193	25493497	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25493498	25493569	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25493498	25493569	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25493570	25495893	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25495894	25495965	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25495894	25495965	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25495966	25498277	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25498278	25498349	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25498278	25498349	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25498350	25500673	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25500674	25500745	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25500674	25500745	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25500746	25503063	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25503064	25503135	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25503064	25503135	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25503136	25505506	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25505507	25505578	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25505507	25505578	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25505579	25517825	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25517826	25517965	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25517826	25517965	.	-	2	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25517966	25518054	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518055	25518118	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518055	25518118	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518119	25518554	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518555	25518606	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518555	25518606	.	-	1	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518607	25519166	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519167	25519258	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519167	25519258	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519259	25519532	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519533	25519679	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519533	25519679	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519680	25526280	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=intron:NA12877_ch_T0001799:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25526281	25526476	.	-	.	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=exon:NA12877_ch_T0001799:22;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25526281	25526283	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001799:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25526281	25526283	.	-	0	source_transcript=ENST00000382432.9;source_transcript_name=DAZ4-203;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382432.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382432.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000382432.9;transcript_id=NA12877_ch_T0001799;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001799;transcript_name=NA12877_ch_T0001799;gene_name=DAZ4;ID=start_codon:NA12877_ch_T0001799;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25452648	25526470	100	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_G0000650;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=NA12877_ch_T0001800;Name=DAZ4
NA12877_chrY	CAT	exon	25452648	25452855	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25452856	25456828	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25456829	25456927	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25456864	25456927	.	-	1	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25456864	25456866	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=stop_codon:NA12877_ch_T0001800;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25456928	25461499	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25461500	25461534	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25461500	25461534	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25461535	25462279	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25462280	25462351	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25462280	25462351	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25462352	25471818	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25471819	25471890	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25471819	25471890	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25471891	25486363	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25486364	25486435	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25486364	25486435	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25486436	25488740	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25488741	25488812	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25488741	25488812	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25488813	25491120	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25491121	25491192	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25491121	25491192	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25491193	25493497	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25493498	25493569	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25493498	25493569	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25493570	25495893	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25495894	25495965	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25495894	25495965	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25495966	25498277	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25498278	25498349	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25498278	25498349	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25498350	25500673	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25500674	25500745	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25500674	25500745	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25500746	25503063	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25503064	25503135	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25503064	25503135	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25503136	25505506	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25505507	25505578	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25505507	25505578	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25505579	25517825	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25517826	25517965	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25517826	25517965	.	-	2	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25517966	25518054	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518055	25518118	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518055	25518118	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518119	25518554	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518555	25518606	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518555	25518606	.	-	1	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518607	25519166	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519167	25519258	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519167	25519258	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519259	25519532	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519533	25519679	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519533	25519679	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519680	25526280	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=intron:NA12877_ch_T0001800:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25526281	25526470	.	-	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=exon:NA12877_ch_T0001800:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25526281	25526283	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001800:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25526281	25526283	.	-	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;alternative_source_transcripts=ENST00000440066.6;transcript_id=NA12877_ch_T0001800;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001800;transcript_name=NA12877_ch_T0001800;gene_name=DAZ4;ID=start_codon:NA12877_ch_T0001800;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25452799	25526283	100	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_G0000650;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=NA12877_ch_T0001801;Name=DAZ4
NA12877_chrY	CAT	exon	25452799	25452855	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25452856	25456828	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25456829	25456927	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25456864	25456927	.	-	1	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25456864	25456866	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=stop_codon:NA12877_ch_T0001801;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25456928	25461499	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25461500	25461534	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25461500	25461534	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25461535	25462279	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25462280	25462351	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25462280	25462351	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25462352	25464663	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25464664	25464735	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25464664	25464735	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25464736	25486363	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25486364	25486435	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25486364	25486435	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25486436	25488740	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25488741	25488812	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25488741	25488812	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25488813	25491120	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25491121	25491192	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25491121	25491192	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25491193	25493497	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25493498	25493569	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25493498	25493569	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25493570	25495893	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25495894	25495965	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25495894	25495965	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25495966	25498277	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25498278	25498349	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25498278	25498349	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25498350	25500673	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25500674	25500745	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25500674	25500745	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25500746	25503063	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25503064	25503135	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25503064	25503135	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25503136	25505506	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25505507	25505578	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25505507	25505578	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25505579	25506978	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25506979	25507118	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25506979	25507118	.	-	2	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25507119	25507207	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25507208	25507271	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25507208	25507271	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25507272	25507707	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25507708	25507759	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25507708	25507759	.	-	1	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25507760	25508319	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25508320	25508411	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25508320	25508411	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25508412	25508685	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25508686	25508832	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25508686	25508832	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25508833	25517825	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25517826	25517965	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25517826	25517965	.	-	2	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25517966	25518054	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518055	25518118	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518055	25518118	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518119	25518554	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518555	25518606	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518555	25518606	.	-	1	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518607	25519166	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519167	25519258	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:22;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519167	25519258	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519259	25519532	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:22;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519533	25519679	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:23;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519533	25519679	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:22;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519680	25526280	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=intron:NA12877_ch_T0001801:23;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25526281	25526283	.	-	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=exon:NA12877_ch_T0001801:24;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25526281	25526283	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001801:23;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25526281	25526283	.	-	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001801;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001801;transcript_name=NA12877_ch_T0001801;gene_name=DAZ4;ID=start_codon:NA12877_ch_T0001801;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25452799	25526283	100	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_G0000650;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=NA12877_ch_T0001802;Name=DAZ4
NA12877_chrY	CAT	exon	25452799	25452855	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25452856	25456828	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25456829	25456927	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25456864	25456927	.	-	1	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:0;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25456864	25456866	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=stop_codon:NA12877_ch_T0001802;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25456928	25461499	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25461500	25461534	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25461500	25461534	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:1;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25461535	25462279	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25462280	25462351	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25462280	25462351	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:2;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25462352	25464663	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25464664	25464735	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25464664	25464735	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:3;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25464736	25491120	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25491121	25491192	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25491121	25491192	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:4;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25491193	25493497	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25493498	25493569	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25493498	25493569	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:5;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25493570	25495893	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25495894	25495965	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25495894	25495965	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:6;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25495966	25498277	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25498278	25498349	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25498278	25498349	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:7;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25498350	25500673	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25500674	25500745	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25500674	25500745	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:8;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25500746	25503063	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25503064	25503135	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25503064	25503135	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:9;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25503136	25505506	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25505507	25505578	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25505507	25505578	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:10;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25505579	25506978	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25506979	25507118	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25506979	25507118	.	-	2	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:11;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25507119	25507207	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25507208	25507271	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25507208	25507271	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:12;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25507272	25507707	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25507708	25507759	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25507708	25507759	.	-	1	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:13;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25507760	25508319	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25508320	25508411	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25508320	25508411	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:14;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25508412	25508685	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25508686	25508832	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25508686	25508832	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:15;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25508833	25517825	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25517826	25517965	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25517826	25517965	.	-	2	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:16;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25517966	25518054	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518055	25518118	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518055	25518118	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:17;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518119	25518554	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25518555	25518606	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25518555	25518606	.	-	1	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:18;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25518607	25519166	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519167	25519258	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519167	25519258	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:19;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519259	25519532	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25519533	25519679	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25519533	25519679	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:20;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25519680	25526280	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=intron:NA12877_ch_T0001802:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25526281	25526283	.	-	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=exon:NA12877_ch_T0001802:22;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25526281	25526283	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=CDS:NA12877_ch_T0001802:21;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25526281	25526283	.	-	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA12877_ch_T0001802;gene_id=NA12877_ch_G0000650;Parent=NA12877_ch_T0001802;transcript_name=NA12877_ch_T0001802;gene_name=DAZ4;ID=start_codon:NA12877_ch_T0001802;Name=DAZ4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25546918	25606879	.	+	.	source_gene_common_name=DAZ3;source_gene=ENSG00000187191.16;alternative_source_transcripts=ENST00000446723.4;gene_id=NA12877_ch_G0000651;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=liftoff;ID=NA12877_ch_G0000651;Name=DAZ3
NA12877_chrY	CAT	transcript	25546918	25606879	100	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_G0000651;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=NA12877_ch_T0001803;Name=DAZ3
NA12877_chrY	CAT	exon	25546918	25547227	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25547225	25547227	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25547225	25547227	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=start_codon:NA12877_ch_T0001803;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25547228	25553828	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25553829	25553975	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25553829	25553975	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25553976	25554249	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25554250	25554341	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25554250	25554341	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25554342	25554901	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25554902	25554953	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:3;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25554902	25554953	.	+	1	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:3;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25554954	25555389	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:3;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25555390	25555453	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:4;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25555390	25555453	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:4;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25555454	25555542	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:4;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25555543	25555682	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:5;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25555543	25555682	.	+	2	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:5;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25555683	25557082	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:5;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25557083	25557154	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:6;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25557083	25557154	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:6;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25557155	25559525	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:6;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25559526	25559597	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:7;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25559526	25559597	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:7;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25559598	25561915	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:7;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25561916	25561987	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:8;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25561916	25561987	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:8;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25561988	25573848	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:8;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25573849	25573920	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:9;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25573849	25573920	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:9;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25573921	25576225	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:9;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25576226	25576297	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:10;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25576226	25576297	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:10;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25576298	25578605	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:10;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25578606	25578677	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:11;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25578606	25578677	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:11;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25578678	25580982	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:11;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25580983	25581054	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:12;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25580983	25581054	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:12;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25581055	25595526	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:12;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25595527	25595598	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:13;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25595527	25595598	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:13;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25595599	25596343	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:13;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25596344	25596378	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:14;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25596344	25596378	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:14;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25596379	25600950	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:14;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25600951	25601049	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:15;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25600951	25601014	.	+	1	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001803:15;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25601012	25601014	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=stop_codon:NA12877_ch_T0001803;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25601050	25605022	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=intron:NA12877_ch_T0001803:15;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25605023	25606879	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000446723.4;transcript_id=NA12877_ch_T0001803;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001803;transcript_name=NA12877_ch_T0001803;gene_name=DAZ3;ID=exon:NA12877_ch_T0001803:16;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25546941	25606879	100	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_G0000651;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=NA12877_ch_T0001804;Name=DAZ3
NA12877_chrY	CAT	exon	25546941	25547227	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25547225	25547227	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25547225	25547227	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=start_codon:NA12877_ch_T0001804;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25547228	25553828	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25553829	25553975	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25553829	25553975	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25553976	25554249	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25554250	25554341	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25554250	25554341	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25554342	25554901	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25554902	25554953	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:3;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25554902	25554953	.	+	1	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:3;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25554954	25555389	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:3;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25555390	25555453	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:4;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25555390	25555453	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:4;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25555454	25555542	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:4;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25555543	25555682	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:5;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25555543	25555682	.	+	2	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:5;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25555683	25557082	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:5;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25557083	25557154	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:6;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25557083	25557154	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:6;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25557155	25559525	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:6;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25559526	25559597	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:7;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25559526	25559597	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:7;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25559598	25561915	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:7;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25561916	25561987	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:8;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25561916	25561987	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:8;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25561988	25576225	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:8;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25576226	25576297	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:9;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25576226	25576297	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:9;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25576298	25580982	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:9;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25580983	25581054	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:10;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25580983	25581054	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:10;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25581055	25585739	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:10;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25585740	25585811	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:11;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25585740	25585811	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:11;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25585812	25595526	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:11;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25595527	25595598	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:12;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25595527	25595598	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:12;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25595599	25596343	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:12;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25596344	25596378	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:13;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25596344	25596378	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:13;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25596379	25600950	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:13;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25600951	25601049	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:14;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25600951	25601014	.	+	1	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001804:14;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25601012	25601014	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=stop_codon:NA12877_ch_T0001804;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25601050	25605022	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=intron:NA12877_ch_T0001804:14;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25605023	25606879	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000315357.9;transcript_id=NA12877_ch_T0001804;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001804;transcript_name=NA12877_ch_T0001804;gene_name=DAZ3;ID=exon:NA12877_ch_T0001804:15;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25547017	25606879	100	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_G0000651;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=NA12877_ch_T0001805;Name=DAZ3
NA12877_chrY	CAT	exon	25547017	25547227	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25547225	25547227	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25547225	25547227	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=start_codon:NA12877_ch_T0001805;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25547228	25553828	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25553829	25553975	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25553829	25553975	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25553976	25554249	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25554250	25554341	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25554250	25554341	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25554342	25554901	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25554902	25554953	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:3;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25554902	25554953	.	+	1	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:3;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25554954	25555389	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:3;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25555390	25555453	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:4;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25555390	25555453	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:4;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25555454	25555542	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:4;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25555543	25555682	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:5;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25555543	25555682	.	+	2	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:5;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25555683	25557082	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:5;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25557083	25557154	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:6;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25557083	25557154	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:6;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25557155	25559525	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:6;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25559526	25559597	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:7;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25559526	25559597	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:7;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25559598	25561915	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:7;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25561916	25561987	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:8;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25561916	25561987	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:8;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25561988	25573848	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:8;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25573849	25573920	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:9;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25573849	25573920	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:9;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25573921	25576225	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:9;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25576226	25576297	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:10;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25576226	25576297	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:10;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25576298	25578605	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:10;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25578606	25578677	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:11;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25578606	25578677	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:11;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25578678	25580982	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:11;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25580983	25581054	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:12;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25580983	25581054	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:12;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25581055	25583362	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:12;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25583363	25583434	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:13;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25583363	25583434	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:13;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25583435	25585739	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:13;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25585740	25585811	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:14;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25585740	25585811	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:14;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25585812	25595526	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:14;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25595527	25595598	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:15;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25595527	25595598	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:15;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25595599	25596343	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:15;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25596344	25596378	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:16;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25596344	25596378	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:16;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25596379	25600950	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:16;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25600951	25601049	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:17;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25600951	25601014	.	+	1	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=CDS:NA12877_ch_T0001805:17;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25601012	25601014	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=stop_codon:NA12877_ch_T0001805;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25601050	25605022	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=intron:NA12877_ch_T0001805:17;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25605023	25606879	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000382365.7;transcript_id=NA12877_ch_T0001805;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001805;transcript_name=NA12877_ch_T0001805;gene_name=DAZ3;ID=exon:NA12877_ch_T0001805:18;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25595400	25606191	1000	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=NA12877_ch_T0001806;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_G0000651;transcript_name=NA12877_ch_T0001806;gene_name=DAZ3;ID=NA12877_ch_T0001806;Name=DAZ3
NA12877_chrY	CAT	exon	25595400	25595598	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=NA12877_ch_T0001806;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001806;transcript_name=NA12877_ch_T0001806;gene_name=DAZ3;ID=exon:NA12877_ch_T0001806:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25595599	25596343	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=NA12877_ch_T0001806;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001806;transcript_name=NA12877_ch_T0001806;gene_name=DAZ3;ID=intron:NA12877_ch_T0001806:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25596344	25596378	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=NA12877_ch_T0001806;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001806;transcript_name=NA12877_ch_T0001806;gene_name=DAZ3;ID=exon:NA12877_ch_T0001806:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25596379	25600950	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=NA12877_ch_T0001806;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001806;transcript_name=NA12877_ch_T0001806;gene_name=DAZ3;ID=intron:NA12877_ch_T0001806:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25600951	25601049	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=NA12877_ch_T0001806;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001806;transcript_name=NA12877_ch_T0001806;gene_name=DAZ3;ID=exon:NA12877_ch_T0001806:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25601050	25605022	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=NA12877_ch_T0001806;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001806;transcript_name=NA12877_ch_T0001806;gene_name=DAZ3;ID=intron:NA12877_ch_T0001806:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25605023	25606191	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000691059.1;transcript_id=NA12877_ch_T0001806;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001806;transcript_name=NA12877_ch_T0001806;gene_name=DAZ3;ID=exon:NA12877_ch_T0001806:3;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25595412	25606871	1000	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=NA12877_ch_T0001807;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_G0000651;transcript_name=NA12877_ch_T0001807;gene_name=DAZ3;ID=NA12877_ch_T0001807;Name=DAZ3
NA12877_chrY	CAT	exon	25595412	25595598	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=NA12877_ch_T0001807;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001807;transcript_name=NA12877_ch_T0001807;gene_name=DAZ3;ID=exon:NA12877_ch_T0001807:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25595599	25596343	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=NA12877_ch_T0001807;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001807;transcript_name=NA12877_ch_T0001807;gene_name=DAZ3;ID=intron:NA12877_ch_T0001807:0;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25596344	25596378	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=NA12877_ch_T0001807;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001807;transcript_name=NA12877_ch_T0001807;gene_name=DAZ3;ID=exon:NA12877_ch_T0001807:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25596379	25597943	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=NA12877_ch_T0001807;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001807;transcript_name=NA12877_ch_T0001807;gene_name=DAZ3;ID=intron:NA12877_ch_T0001807:1;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25597944	25598015	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=NA12877_ch_T0001807;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001807;transcript_name=NA12877_ch_T0001807;gene_name=DAZ3;ID=exon:NA12877_ch_T0001807:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25598016	25600950	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=NA12877_ch_T0001807;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001807;transcript_name=NA12877_ch_T0001807;gene_name=DAZ3;ID=intron:NA12877_ch_T0001807:2;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25600951	25601049	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=NA12877_ch_T0001807;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001807;transcript_name=NA12877_ch_T0001807;gene_name=DAZ3;ID=exon:NA12877_ch_T0001807:3;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25601050	25605022	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=NA12877_ch_T0001807;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001807;transcript_name=NA12877_ch_T0001807;gene_name=DAZ3;ID=intron:NA12877_ch_T0001807:3;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25605023	25606871	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000692367.1;transcript_id=NA12877_ch_T0001807;gene_id=NA12877_ch_G0000651;Parent=NA12877_ch_T0001807;transcript_name=NA12877_ch_T0001807;gene_name=DAZ3;ID=exon:NA12877_ch_T0001807:4;Name=DAZ3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25677010	25678151	.	-	.	source_gene_common_name=TRIM60P11Y;source_gene=ENSG00000227837.1;gene_id=NA12877_ch_G0000652;gene_biotype=processed_pseudogene;gene_name=TRIM60P11Y;gene_sources=liftoff;ID=NA12877_ch_G0000652;Name=TRIM60P11Y
NA12877_chrY	CAT	transcript	25677010	25678151	1000	-	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=NA12877_ch_T0001808;gene_id=NA12877_ch_G0000652;Parent=NA12877_ch_G0000652;transcript_name=NA12877_ch_T0001808;gene_name=TRIM60P11Y;ID=NA12877_ch_T0001808;Name=TRIM60P11Y
NA12877_chrY	CAT	exon	25677010	25677525	.	-	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=NA12877_ch_T0001808;gene_id=NA12877_ch_G0000652;Parent=NA12877_ch_T0001808;transcript_name=NA12877_ch_T0001808;gene_name=TRIM60P11Y;ID=exon:NA12877_ch_T0001808:0;Name=TRIM60P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25677526	25677866	.	-	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=NA12877_ch_T0001808;gene_id=NA12877_ch_G0000652;Parent=NA12877_ch_T0001808;transcript_name=NA12877_ch_T0001808;gene_name=TRIM60P11Y;ID=intron:NA12877_ch_T0001808:0;Name=TRIM60P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25677867	25678151	.	-	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=NA12877_ch_T0001808;gene_id=NA12877_ch_G0000652;Parent=NA12877_ch_T0001808;transcript_name=NA12877_ch_T0001808;gene_name=TRIM60P11Y;ID=exon:NA12877_ch_T0001808:1;Name=TRIM60P11Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25684995	25686273	.	-	.	source_gene_common_name=ZNF736P2Y;source_gene=ENSG00000226270.3;alternative_source_transcripts=ENST00000416040.1;gene_id=NA12877_ch_G0000653;gene_biotype=processed_pseudogene;gene_name=ZNF736P2Y;gene_sources=liftoff;ID=NA12877_ch_G0000653;Name=ZNF736P2Y
NA12877_chrY	CAT	transcript	25684995	25686273	1000	-	.	source_transcript=ENST00000416040.1;source_transcript_name=ZNF736P2Y-201;source_gene=ENSG00000226270.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226270.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416040.1;transcript_score=199.922;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P2Y;alternative_source_transcripts=ENST00000416040.1;transcript_id=NA12877_ch_T0001809;gene_id=NA12877_ch_G0000653;Parent=NA12877_ch_G0000653;transcript_name=NA12877_ch_T0001809;gene_name=ZNF736P2Y;ID=NA12877_ch_T0001809;Name=ZNF736P2Y
NA12877_chrY	CAT	exon	25684995	25686273	.	-	.	source_transcript=ENST00000416040.1;source_transcript_name=ZNF736P2Y-201;source_gene=ENSG00000226270.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226270.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416040.1;transcript_score=199.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P2Y;alternative_source_transcripts=ENST00000416040.1;transcript_id=NA12877_ch_T0001809;gene_id=NA12877_ch_G0000653;Parent=NA12877_ch_T0001809;transcript_name=NA12877_ch_T0001809;gene_name=ZNF736P2Y;ID=exon:NA12877_ch_T0001809:0;Name=ZNF736P2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25709525	25710594	.	-	.	source_gene_common_name=TRIM60P10Y;source_gene=ENSG00000232976.1;gene_id=NA12877_ch_G0000654;gene_biotype=processed_pseudogene;gene_name=TRIM60P10Y;gene_sources=liftoff;ID=NA12877_ch_G0000654;Name=TRIM60P10Y
NA12877_chrY	CAT	transcript	25709525	25710594	1000	-	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=NA12877_ch_T0001810;gene_id=NA12877_ch_G0000654;Parent=NA12877_ch_G0000654;transcript_name=NA12877_ch_T0001810;gene_name=TRIM60P10Y;ID=NA12877_ch_T0001810;Name=TRIM60P10Y
NA12877_chrY	CAT	exon	25709525	25710044	.	-	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=NA12877_ch_T0001810;gene_id=NA12877_ch_G0000654;Parent=NA12877_ch_T0001810;transcript_name=NA12877_ch_T0001810;gene_name=TRIM60P10Y;ID=exon:NA12877_ch_T0001810:0;Name=TRIM60P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25710045	25710363	.	-	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=NA12877_ch_T0001810;gene_id=NA12877_ch_G0000654;Parent=NA12877_ch_T0001810;transcript_name=NA12877_ch_T0001810;gene_name=TRIM60P10Y;ID=intron:NA12877_ch_T0001810:0;Name=TRIM60P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25710364	25710594	.	-	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=NA12877_ch_T0001810;gene_id=NA12877_ch_G0000654;Parent=NA12877_ch_T0001810;transcript_name=NA12877_ch_T0001810;gene_name=TRIM60P10Y;ID=exon:NA12877_ch_T0001810:1;Name=TRIM60P10Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25718397	25719123	.	-	.	source_gene_common_name=ENSG00000240566;source_gene=ENSG00000240566.1;gene_id=NA12877_ch_G0000655;gene_biotype=processed_pseudogene;gene_name=ENSG00000240566;gene_sources=liftoff;ID=NA12877_ch_G0000655;Name=ENSG00000240566
NA12877_chrY	CAT	transcript	25718397	25719123	1000	-	.	source_transcript=ENST00000432862.1;source_transcript_name=ENST00000432862;source_gene=ENSG00000240566.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000240566.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432862.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432862.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000240566;transcript_id=NA12877_ch_T0001811;gene_id=NA12877_ch_G0000655;Parent=NA12877_ch_G0000655;transcript_name=NA12877_ch_T0001811;gene_name=ENSG00000240566;ID=NA12877_ch_T0001811;Name=ENSG00000240566
NA12877_chrY	CAT	exon	25718397	25719123	.	-	.	source_transcript=ENST00000432862.1;source_transcript_name=ENST00000432862;source_gene=ENSG00000240566.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000240566.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432862.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432862.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000240566;transcript_id=NA12877_ch_T0001811;gene_id=NA12877_ch_G0000655;Parent=NA12877_ch_T0001811;transcript_name=NA12877_ch_T0001811;gene_name=ENSG00000240566;ID=exon:NA12877_ch_T0001811:0;Name=ENSG00000240566;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25730724	25762370	.	-	.	source_gene_common_name=BPY2;source_gene=ENSG00000183753.10;alternative_source_transcripts=ENST00000382287.5;gene_id=NA12877_ch_G0000656;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=NA12877_ch_G0000656;Name=BPY2
NA12877_chrY	CAT	transcript	25730724	25751926	100	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_G0000656;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=NA12877_ch_T0001812;Name=BPY2
NA12877_chrY	CAT	exon	25730724	25731045	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=exon:NA12877_ch_T0001812:0;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25731046	25731139	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=intron:NA12877_ch_T0001812:0;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25731140	25731264	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=exon:NA12877_ch_T0001812:1;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25731265	25737814	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=intron:NA12877_ch_T0001812:1;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25737815	25737939	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=exon:NA12877_ch_T0001812:2;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25737921	25737939	.	-	1	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=CDS:NA12877_ch_T0001812:0;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25737921	25737923	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=stop_codon:NA12877_ch_T0001812;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25737940	25738631	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=intron:NA12877_ch_T0001812:2;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25738632	25738737	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=exon:NA12877_ch_T0001812:3;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25738632	25738737	.	-	2	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=CDS:NA12877_ch_T0001812:1;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25738738	25741590	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=intron:NA12877_ch_T0001812:3;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25741591	25741708	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=exon:NA12877_ch_T0001812:4;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25741591	25741708	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=CDS:NA12877_ch_T0001812:2;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25741709	25743767	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=intron:NA12877_ch_T0001812:4;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25743768	25743886	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=exon:NA12877_ch_T0001812:5;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25743768	25743845	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=CDS:NA12877_ch_T0001812:3;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25743843	25743845	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=start_codon:NA12877_ch_T0001812;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25743887	25748295	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=intron:NA12877_ch_T0001812:5;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25748296	25748432	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=exon:NA12877_ch_T0001812:6;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25748433	25751497	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=intron:NA12877_ch_T0001812:6;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25751498	25751620	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=exon:NA12877_ch_T0001812:7;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25751621	25751895	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=intron:NA12877_ch_T0001812:7;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25751896	25751926	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382287.5;transcript_id=NA12877_ch_T0001812;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001812;transcript_name=NA12877_ch_T0001812;gene_name=BPY2;ID=exon:NA12877_ch_T0001812:8;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25730783	25751902	1000	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_G0000656;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=NA12877_ch_T0001813;Name=BPY2
NA12877_chrY	CAT	exon	25730783	25731045	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=exon:NA12877_ch_T0001813:0;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25731046	25731134	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=intron:NA12877_ch_T0001813:0;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25731135	25731264	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=exon:NA12877_ch_T0001813:1;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25731265	25737814	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=intron:NA12877_ch_T0001813:1;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25737815	25737939	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=exon:NA12877_ch_T0001813:2;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25737940	25738631	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=intron:NA12877_ch_T0001813:2;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25738632	25738737	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=exon:NA12877_ch_T0001813:3;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25738738	25743767	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=intron:NA12877_ch_T0001813:3;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25743768	25743886	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=exon:NA12877_ch_T0001813:4;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25743887	25748295	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=intron:NA12877_ch_T0001813:4;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25748296	25748432	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=exon:NA12877_ch_T0001813:5;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25748433	25751497	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=intron:NA12877_ch_T0001813:5;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25751498	25751620	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=exon:NA12877_ch_T0001813:6;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25751621	25751895	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=intron:NA12877_ch_T0001813:6;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25751896	25751902	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602559.5;transcript_id=NA12877_ch_T0001813;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001813;transcript_name=NA12877_ch_T0001813;gene_name=BPY2;ID=exon:NA12877_ch_T0001813:7;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25737921	25743845	100	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_G0000656;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=NA12877_ch_T0001814;Name=BPY2
NA12877_chrY	CAT	exon	25737921	25737939	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=exon:NA12877_ch_T0001814:0;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25737921	25737939	.	-	1	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=CDS:NA12877_ch_T0001814:0;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	25737921	25737923	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=stop_codon:NA12877_ch_T0001814;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25737940	25738631	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=intron:NA12877_ch_T0001814:0;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25738632	25738737	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=exon:NA12877_ch_T0001814:1;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25738632	25738737	.	-	2	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=CDS:NA12877_ch_T0001814:1;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25738738	25741590	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=intron:NA12877_ch_T0001814:1;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25741591	25741708	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=exon:NA12877_ch_T0001814:2;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25741591	25741708	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=CDS:NA12877_ch_T0001814:2;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25741709	25743767	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=intron:NA12877_ch_T0001814:2;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25743768	25743845	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=exon:NA12877_ch_T0001814:3;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25743768	25743845	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=CDS:NA12877_ch_T0001814:3;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25743843	25743845	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000618574.1;transcript_id=NA12877_ch_T0001814;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001814;transcript_name=NA12877_ch_T0001814;gene_name=BPY2;ID=start_codon:NA12877_ch_T0001814;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25743813	25762370	100	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602680.1;transcript_id=NA12877_ch_T0001815;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_G0000656;transcript_name=NA12877_ch_T0001815;gene_name=BPY2;ID=NA12877_ch_T0001815;Name=BPY2
NA12877_chrY	CAT	exon	25743813	25743886	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602680.1;transcript_id=NA12877_ch_T0001815;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001815;transcript_name=NA12877_ch_T0001815;gene_name=BPY2;ID=exon:NA12877_ch_T0001815:0;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	25743813	25743845	.	-	0	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602680.1;transcript_id=NA12877_ch_T0001815;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001815;transcript_name=NA12877_ch_T0001815;gene_name=BPY2;ID=CDS:NA12877_ch_T0001815:0;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	25743843	25743845	.	-	0	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602680.1;transcript_id=NA12877_ch_T0001815;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001815;transcript_name=NA12877_ch_T0001815;gene_name=BPY2;ID=start_codon:NA12877_ch_T0001815;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25743887	25748295	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602680.1;transcript_id=NA12877_ch_T0001815;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001815;transcript_name=NA12877_ch_T0001815;gene_name=BPY2;ID=intron:NA12877_ch_T0001815:0;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25748296	25748432	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602680.1;transcript_id=NA12877_ch_T0001815;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001815;transcript_name=NA12877_ch_T0001815;gene_name=BPY2;ID=exon:NA12877_ch_T0001815:1;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25748433	25751497	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602680.1;transcript_id=NA12877_ch_T0001815;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001815;transcript_name=NA12877_ch_T0001815;gene_name=BPY2;ID=intron:NA12877_ch_T0001815:1;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25751498	25751620	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602680.1;transcript_id=NA12877_ch_T0001815;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001815;transcript_name=NA12877_ch_T0001815;gene_name=BPY2;ID=exon:NA12877_ch_T0001815:2;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25751621	25751972	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602680.1;transcript_id=NA12877_ch_T0001815;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001815;transcript_name=NA12877_ch_T0001815;gene_name=BPY2;ID=intron:NA12877_ch_T0001815:2;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25751973	25752041	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602680.1;transcript_id=NA12877_ch_T0001815;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001815;transcript_name=NA12877_ch_T0001815;gene_name=BPY2;ID=exon:NA12877_ch_T0001815:3;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25752042	25762214	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602680.1;transcript_id=NA12877_ch_T0001815;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001815;transcript_name=NA12877_ch_T0001815;gene_name=BPY2;ID=intron:NA12877_ch_T0001815:3;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25762215	25762370	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602680.1;transcript_id=NA12877_ch_T0001815;gene_id=NA12877_ch_G0000656;Parent=NA12877_ch_T0001815;transcript_name=NA12877_ch_T0001815;gene_name=BPY2;ID=exon:NA12877_ch_T0001815:4;Name=BPY2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25762905	25799714	.	-	.	source_gene_common_name=TTTY4C;source_gene=ENSG00000228296.1;alternative_source_transcripts=ENST00000456123.1;gene_id=NA12877_ch_G0000657;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=NA12877_ch_G0000657;Name=TTTY4C
NA12877_chrY	CAT	transcript	25762905	25799714	1000	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=ENST00000456123.1;transcript_id=NA12877_ch_T0001816;gene_id=NA12877_ch_G0000657;Parent=NA12877_ch_G0000657;transcript_name=NA12877_ch_T0001816;gene_name=TTTY4C;ID=NA12877_ch_T0001816;Name=TTTY4C
NA12877_chrY	CAT	exon	25762905	25763905	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=ENST00000456123.1;transcript_id=NA12877_ch_T0001816;gene_id=NA12877_ch_G0000657;Parent=NA12877_ch_T0001816;transcript_name=NA12877_ch_T0001816;gene_name=TTTY4C;ID=exon:NA12877_ch_T0001816:0;Name=TTTY4C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25763906	25770555	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=ENST00000456123.1;transcript_id=NA12877_ch_T0001816;gene_id=NA12877_ch_G0000657;Parent=NA12877_ch_T0001816;transcript_name=NA12877_ch_T0001816;gene_name=TTTY4C;ID=intron:NA12877_ch_T0001816:0;Name=TTTY4C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25770556	25770663	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=ENST00000456123.1;transcript_id=NA12877_ch_T0001816;gene_id=NA12877_ch_G0000657;Parent=NA12877_ch_T0001816;transcript_name=NA12877_ch_T0001816;gene_name=TTTY4C;ID=exon:NA12877_ch_T0001816:1;Name=TTTY4C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25770664	25772467	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=ENST00000456123.1;transcript_id=NA12877_ch_T0001816;gene_id=NA12877_ch_G0000657;Parent=NA12877_ch_T0001816;transcript_name=NA12877_ch_T0001816;gene_name=TTTY4C;ID=intron:NA12877_ch_T0001816:1;Name=TTTY4C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25772468	25772543	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=ENST00000456123.1;transcript_id=NA12877_ch_T0001816;gene_id=NA12877_ch_G0000657;Parent=NA12877_ch_T0001816;transcript_name=NA12877_ch_T0001816;gene_name=TTTY4C;ID=exon:NA12877_ch_T0001816:2;Name=TTTY4C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25772544	25799553	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=ENST00000456123.1;transcript_id=NA12877_ch_T0001816;gene_id=NA12877_ch_G0000657;Parent=NA12877_ch_T0001816;transcript_name=NA12877_ch_T0001816;gene_name=TTTY4C;ID=intron:NA12877_ch_T0001816:2;Name=TTTY4C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25799554	25799714	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=ENST00000456123.1;transcript_id=NA12877_ch_T0001816;gene_id=NA12877_ch_G0000657;Parent=NA12877_ch_T0001816;transcript_name=NA12877_ch_T0001816;gene_name=TTTY4C;ID=exon:NA12877_ch_T0001816:3;Name=TTTY4C;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25868421	25869663	.	+	.	source_gene_common_name=ZNF736P4Y;source_gene=ENSG00000236379.2;alternative_source_transcripts=ENST00000454995.1,ENST00000454995.1;gene_id=NA12877_ch_G0000658;gene_biotype=processed_pseudogene;gene_name=ZNF736P4Y;gene_sources=liftoff;ID=NA12877_ch_G0000658;Name=ZNF736P4Y
NA12877_chrY	CAT	transcript	25868421	25869663	1000	+	.	source_transcript=ENST00000454995.1;source_transcript_name=ZNF736P4Y-201;source_gene=ENSG00000236379.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236379.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454995.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P4Y;alternative_source_transcripts=ENST00000454995.1,ENST00000454995.1;transcript_id=NA12877_ch_T0001817;gene_id=NA12877_ch_G0000658;Parent=NA12877_ch_G0000658;transcript_name=NA12877_ch_T0001817;gene_name=ZNF736P4Y;ID=NA12877_ch_T0001817;Name=ZNF736P4Y
NA12877_chrY	CAT	exon	25868421	25869663	.	+	.	source_transcript=ENST00000454995.1;source_transcript_name=ZNF736P4Y-201;source_gene=ENSG00000236379.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236379.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454995.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P4Y;alternative_source_transcripts=ENST00000454995.1,ENST00000454995.1;transcript_id=NA12877_ch_T0001817;gene_id=NA12877_ch_G0000658;Parent=NA12877_ch_T0001817;transcript_name=NA12877_ch_T0001817;gene_name=ZNF736P4Y;ID=exon:NA12877_ch_T0001817:0;Name=ZNF736P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25874342	25875059	.	+	.	source_gene_common_name=ENSG00000274899;source_gene=ENSG00000274899.1;alternative_source_transcripts=ENST00000619436.1;gene_id=NA12877_ch_G0000659;gene_biotype=processed_pseudogene;gene_name=ENSG00000274899;gene_sources=liftoff;ID=NA12877_ch_G0000659;Name=ENSG00000274899
NA12877_chrY	CAT	transcript	25874342	25875059	1000	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;alternative_source_transcripts=ENST00000619436.1;transcript_id=NA12877_ch_T0001818;gene_id=NA12877_ch_G0000659;Parent=NA12877_ch_G0000659;transcript_name=NA12877_ch_T0001818;gene_name=ENSG00000274899;ID=NA12877_ch_T0001818;Name=ENSG00000274899
NA12877_chrY	CAT	exon	25874342	25874614	.	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;alternative_source_transcripts=ENST00000619436.1;transcript_id=NA12877_ch_T0001818;gene_id=NA12877_ch_G0000659;Parent=NA12877_ch_T0001818;transcript_name=NA12877_ch_T0001818;gene_name=ENSG00000274899;ID=exon:NA12877_ch_T0001818:0;Name=ENSG00000274899;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25874615	25874917	.	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;alternative_source_transcripts=ENST00000619436.1;transcript_id=NA12877_ch_T0001818;gene_id=NA12877_ch_G0000659;Parent=NA12877_ch_T0001818;transcript_name=NA12877_ch_T0001818;gene_name=ENSG00000274899;ID=intron:NA12877_ch_T0001818:0;Name=ENSG00000274899;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25874918	25875059	.	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;alternative_source_transcripts=ENST00000619436.1;transcript_id=NA12877_ch_T0001818;gene_id=NA12877_ch_G0000659;Parent=NA12877_ch_T0001818;transcript_name=NA12877_ch_T0001818;gene_name=ENSG00000274899;ID=exon:NA12877_ch_T0001818:1;Name=ENSG00000274899;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25882089	25913676	.	-	.	source_gene_common_name=TTTY17C;source_gene=ENSG00000223641.3;alternative_source_transcripts=ENST00000421387.3;gene_id=NA12877_ch_G0000660;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=NA12877_ch_G0000660;Name=TTTY17C
NA12877_chrY	CAT	transcript	25882089	25913544	1000	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=NA12877_ch_T0001819;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_G0000660;transcript_name=NA12877_ch_T0001819;gene_name=TTTY17C;ID=NA12877_ch_T0001819;Name=TTTY17C
NA12877_chrY	CAT	exon	25882089	25882409	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=NA12877_ch_T0001819;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001819;transcript_name=NA12877_ch_T0001819;gene_name=TTTY17C;ID=exon:NA12877_ch_T0001819:0;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25882410	25883409	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=NA12877_ch_T0001819;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001819;transcript_name=NA12877_ch_T0001819;gene_name=TTTY17C;ID=intron:NA12877_ch_T0001819:0;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25883410	25883570	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=NA12877_ch_T0001819;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001819;transcript_name=NA12877_ch_T0001819;gene_name=TTTY17C;ID=exon:NA12877_ch_T0001819:1;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25883571	25884536	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=NA12877_ch_T0001819;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001819;transcript_name=NA12877_ch_T0001819;gene_name=TTTY17C;ID=intron:NA12877_ch_T0001819:1;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25884537	25884661	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=NA12877_ch_T0001819;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001819;transcript_name=NA12877_ch_T0001819;gene_name=TTTY17C;ID=exon:NA12877_ch_T0001819:2;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25884662	25900426	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=NA12877_ch_T0001819;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001819;transcript_name=NA12877_ch_T0001819;gene_name=TTTY17C;ID=intron:NA12877_ch_T0001819:2;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25900427	25900535	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=NA12877_ch_T0001819;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001819;transcript_name=NA12877_ch_T0001819;gene_name=TTTY17C;ID=exon:NA12877_ch_T0001819:3;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25900536	25913142	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=NA12877_ch_T0001819;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001819;transcript_name=NA12877_ch_T0001819;gene_name=TTTY17C;ID=intron:NA12877_ch_T0001819:3;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25913143	25913212	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=NA12877_ch_T0001819;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001819;transcript_name=NA12877_ch_T0001819;gene_name=TTTY17C;ID=exon:NA12877_ch_T0001819:4;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25913213	25913498	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=NA12877_ch_T0001819;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001819;transcript_name=NA12877_ch_T0001819;gene_name=TTTY17C;ID=intron:NA12877_ch_T0001819:4;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25913499	25913544	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000421387.3;transcript_id=NA12877_ch_T0001819;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001819;transcript_name=NA12877_ch_T0001819;gene_name=TTTY17C;ID=exon:NA12877_ch_T0001819:5;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25882089	25913676	1000	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=NA12877_ch_T0001820;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_G0000660;transcript_name=NA12877_ch_T0001820;gene_name=TTTY17C;ID=NA12877_ch_T0001820;Name=TTTY17C
NA12877_chrY	CAT	exon	25882089	25882409	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=NA12877_ch_T0001820;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001820;transcript_name=NA12877_ch_T0001820;gene_name=TTTY17C;ID=exon:NA12877_ch_T0001820:0;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25882410	25883409	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=NA12877_ch_T0001820;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001820;transcript_name=NA12877_ch_T0001820;gene_name=TTTY17C;ID=intron:NA12877_ch_T0001820:0;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25883410	25883570	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=NA12877_ch_T0001820;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001820;transcript_name=NA12877_ch_T0001820;gene_name=TTTY17C;ID=exon:NA12877_ch_T0001820:1;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25883571	25884536	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=NA12877_ch_T0001820;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001820;transcript_name=NA12877_ch_T0001820;gene_name=TTTY17C;ID=intron:NA12877_ch_T0001820:1;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25884537	25884661	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=NA12877_ch_T0001820;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001820;transcript_name=NA12877_ch_T0001820;gene_name=TTTY17C;ID=exon:NA12877_ch_T0001820:2;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25884662	25894787	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=NA12877_ch_T0001820;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001820;transcript_name=NA12877_ch_T0001820;gene_name=TTTY17C;ID=intron:NA12877_ch_T0001820:2;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25894788	25894904	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=NA12877_ch_T0001820;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001820;transcript_name=NA12877_ch_T0001820;gene_name=TTTY17C;ID=exon:NA12877_ch_T0001820:3;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25894905	25913142	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=NA12877_ch_T0001820;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001820;transcript_name=NA12877_ch_T0001820;gene_name=TTTY17C;ID=intron:NA12877_ch_T0001820:3;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25913143	25913212	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=NA12877_ch_T0001820;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001820;transcript_name=NA12877_ch_T0001820;gene_name=TTTY17C;ID=exon:NA12877_ch_T0001820:4;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25913213	25913606	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=NA12877_ch_T0001820;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001820;transcript_name=NA12877_ch_T0001820;gene_name=TTTY17C;ID=intron:NA12877_ch_T0001820:4;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25913607	25913676	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=ENST00000772950.1;transcript_id=NA12877_ch_T0001820;gene_id=NA12877_ch_G0000660;Parent=NA12877_ch_T0001820;transcript_name=NA12877_ch_T0001820;gene_name=TTTY17C;ID=exon:NA12877_ch_T0001820:5;Name=TTTY17C;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25913990	25919080	.	+	.	source_gene_common_name=ENSG00000294545;source_gene=ENSG00000294545.1;alternative_source_transcripts=ENST00000724319.1;gene_id=NA12877_ch_G0000661;gene_biotype=lncRNA;gene_name=ENSG00000294545;gene_sources=liftoff;ID=NA12877_ch_G0000661;Name=ENSG00000294545
NA12877_chrY	CAT	transcript	25913990	25919080	1000	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=NA12877_ch_T0001821;gene_id=NA12877_ch_G0000661;Parent=NA12877_ch_G0000661;transcript_name=NA12877_ch_T0001821;gene_name=ENSG00000294545;ID=NA12877_ch_T0001821;Name=ENSG00000294545
NA12877_chrY	CAT	exon	25913990	25914086	.	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=NA12877_ch_T0001821;gene_id=NA12877_ch_G0000661;Parent=NA12877_ch_T0001821;transcript_name=NA12877_ch_T0001821;gene_name=ENSG00000294545;ID=exon:NA12877_ch_T0001821:0;Name=ENSG00000294545;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25914087	25918738	.	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=NA12877_ch_T0001821;gene_id=NA12877_ch_G0000661;Parent=NA12877_ch_T0001821;transcript_name=NA12877_ch_T0001821;gene_name=ENSG00000294545;ID=intron:NA12877_ch_T0001821:0;Name=ENSG00000294545;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25918739	25919080	.	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=NA12877_ch_T0001821;gene_id=NA12877_ch_G0000661;Parent=NA12877_ch_T0001821;transcript_name=NA12877_ch_T0001821;gene_name=ENSG00000294545;ID=exon:NA12877_ch_T0001821:1;Name=ENSG00000294545;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25964065	26048668	.	+	.	source_gene_common_name=ENSG00000306715;source_gene=ENSG00000306715.1;alternative_source_transcripts=ENST00000820371.1,ENST00000820371.1;gene_id=NA12877_ch_G0000662;gene_biotype=lncRNA;gene_name=ENSG00000306715;gene_sources=liftoff;ID=NA12877_ch_G0000662;Name=ENSG00000306715
NA12877_chrY	CAT	transcript	25964065	26048668	1000	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1,ENST00000820371.1;transcript_id=NA12877_ch_T0001822;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_G0000662;transcript_name=NA12877_ch_T0001822;gene_name=ENSG00000306715;ID=NA12877_ch_T0001822;Name=ENSG00000306715
NA12877_chrY	CAT	exon	25964065	25964163	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1,ENST00000820371.1;transcript_id=NA12877_ch_T0001822;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001822;transcript_name=NA12877_ch_T0001822;gene_name=ENSG00000306715;ID=exon:NA12877_ch_T0001822:0;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25964164	25975770	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1,ENST00000820371.1;transcript_id=NA12877_ch_T0001822;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001822;transcript_name=NA12877_ch_T0001822;gene_name=ENSG00000306715;ID=intron:NA12877_ch_T0001822:0;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25975771	25975878	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1,ENST00000820371.1;transcript_id=NA12877_ch_T0001822;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001822;transcript_name=NA12877_ch_T0001822;gene_name=ENSG00000306715;ID=exon:NA12877_ch_T0001822:1;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25975879	25990313	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1,ENST00000820371.1;transcript_id=NA12877_ch_T0001822;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001822;transcript_name=NA12877_ch_T0001822;gene_name=ENSG00000306715;ID=intron:NA12877_ch_T0001822:1;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25990314	25990418	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1,ENST00000820371.1;transcript_id=NA12877_ch_T0001822;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001822;transcript_name=NA12877_ch_T0001822;gene_name=ENSG00000306715;ID=exon:NA12877_ch_T0001822:2;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25990419	26048256	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1,ENST00000820371.1;transcript_id=NA12877_ch_T0001822;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001822;transcript_name=NA12877_ch_T0001822;gene_name=ENSG00000306715;ID=intron:NA12877_ch_T0001822:2;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26048257	26048668	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1,ENST00000820371.1;transcript_id=NA12877_ch_T0001822;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001822;transcript_name=NA12877_ch_T0001822;gene_name=ENSG00000306715;ID=exon:NA12877_ch_T0001822:3;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	25964096	25995702	1000	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1,ENST00000820372.1;transcript_id=NA12877_ch_T0001823;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_G0000662;transcript_name=NA12877_ch_T0001823;gene_name=ENSG00000306715;ID=NA12877_ch_T0001823;Name=ENSG00000306715
NA12877_chrY	CAT	exon	25964096	25964163	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1,ENST00000820372.1;transcript_id=NA12877_ch_T0001823;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001823;transcript_name=NA12877_ch_T0001823;gene_name=ENSG00000306715;ID=exon:NA12877_ch_T0001823:0;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25964164	25975770	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1,ENST00000820372.1;transcript_id=NA12877_ch_T0001823;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001823;transcript_name=NA12877_ch_T0001823;gene_name=ENSG00000306715;ID=intron:NA12877_ch_T0001823:0;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25975771	25975878	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1,ENST00000820372.1;transcript_id=NA12877_ch_T0001823;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001823;transcript_name=NA12877_ch_T0001823;gene_name=ENSG00000306715;ID=exon:NA12877_ch_T0001823:1;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25975879	25990313	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1,ENST00000820372.1;transcript_id=NA12877_ch_T0001823;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001823;transcript_name=NA12877_ch_T0001823;gene_name=ENSG00000306715;ID=intron:NA12877_ch_T0001823:1;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25990314	25990418	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1,ENST00000820372.1;transcript_id=NA12877_ch_T0001823;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001823;transcript_name=NA12877_ch_T0001823;gene_name=ENSG00000306715;ID=exon:NA12877_ch_T0001823:2;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25990419	25995047	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1,ENST00000820372.1;transcript_id=NA12877_ch_T0001823;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001823;transcript_name=NA12877_ch_T0001823;gene_name=ENSG00000306715;ID=intron:NA12877_ch_T0001823:2;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25995048	25995702	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1,ENST00000820372.1;transcript_id=NA12877_ch_T0001823;gene_id=NA12877_ch_G0000662;Parent=NA12877_ch_T0001823;transcript_name=NA12877_ch_T0001823;gene_name=ENSG00000306715;ID=exon:NA12877_ch_T0001823:3;Name=ENSG00000306715;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	25966405	25973352	.	+	.	source_gene_common_name=RBMY2YP;source_gene=ENSG00000227633.1;alternative_source_transcripts=ENST00000423333.1;gene_id=NA12877_ch_G0000663;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2YP;gene_sources=liftoff;ID=NA12877_ch_G0000663;Name=RBMY2YP
NA12877_chrY	CAT	transcript	25966405	25973352	1000	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=NA12877_ch_T0001824;gene_id=NA12877_ch_G0000663;Parent=NA12877_ch_G0000663;transcript_name=NA12877_ch_T0001824;gene_name=RBMY2YP;ID=NA12877_ch_T0001824;Name=RBMY2YP
NA12877_chrY	CAT	exon	25966405	25966517	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=NA12877_ch_T0001824;gene_id=NA12877_ch_G0000663;Parent=NA12877_ch_T0001824;transcript_name=NA12877_ch_T0001824;gene_name=RBMY2YP;ID=exon:NA12877_ch_T0001824:0;Name=RBMY2YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25966518	25966927	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=NA12877_ch_T0001824;gene_id=NA12877_ch_G0000663;Parent=NA12877_ch_T0001824;transcript_name=NA12877_ch_T0001824;gene_name=RBMY2YP;ID=intron:NA12877_ch_T0001824:0;Name=RBMY2YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25966928	25967029	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=NA12877_ch_T0001824;gene_id=NA12877_ch_G0000663;Parent=NA12877_ch_T0001824;transcript_name=NA12877_ch_T0001824;gene_name=RBMY2YP;ID=exon:NA12877_ch_T0001824:1;Name=RBMY2YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25967030	25969417	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=NA12877_ch_T0001824;gene_id=NA12877_ch_G0000663;Parent=NA12877_ch_T0001824;transcript_name=NA12877_ch_T0001824;gene_name=RBMY2YP;ID=intron:NA12877_ch_T0001824:1;Name=RBMY2YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25969418	25969599	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=NA12877_ch_T0001824;gene_id=NA12877_ch_G0000663;Parent=NA12877_ch_T0001824;transcript_name=NA12877_ch_T0001824;gene_name=RBMY2YP;ID=exon:NA12877_ch_T0001824:2;Name=RBMY2YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25969600	25972343	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=NA12877_ch_T0001824;gene_id=NA12877_ch_G0000663;Parent=NA12877_ch_T0001824;transcript_name=NA12877_ch_T0001824;gene_name=RBMY2YP;ID=intron:NA12877_ch_T0001824:2;Name=RBMY2YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25972344	25972454	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=NA12877_ch_T0001824;gene_id=NA12877_ch_G0000663;Parent=NA12877_ch_T0001824;transcript_name=NA12877_ch_T0001824;gene_name=RBMY2YP;ID=exon:NA12877_ch_T0001824:3;Name=RBMY2YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25972455	25972535	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=NA12877_ch_T0001824;gene_id=NA12877_ch_G0000663;Parent=NA12877_ch_T0001824;transcript_name=NA12877_ch_T0001824;gene_name=RBMY2YP;ID=intron:NA12877_ch_T0001824:3;Name=RBMY2YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25972536	25972624	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=NA12877_ch_T0001824;gene_id=NA12877_ch_G0000663;Parent=NA12877_ch_T0001824;transcript_name=NA12877_ch_T0001824;gene_name=RBMY2YP;ID=exon:NA12877_ch_T0001824:4;Name=RBMY2YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	25972625	25973037	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=NA12877_ch_T0001824;gene_id=NA12877_ch_G0000663;Parent=NA12877_ch_T0001824;transcript_name=NA12877_ch_T0001824;gene_name=RBMY2YP;ID=intron:NA12877_ch_T0001824:4;Name=RBMY2YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	25973038	25973352	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=NA12877_ch_T0001824;gene_id=NA12877_ch_G0000663;Parent=NA12877_ch_T0001824;transcript_name=NA12877_ch_T0001824;gene_name=RBMY2YP;ID=exon:NA12877_ch_T0001824:5;Name=RBMY2YP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26007551	26007625	.	+	.	source_gene_common_name=ENSG00000279115;source_gene=ENSG00000279115.2;alternative_source_transcripts=ENST00000624491.2;gene_id=NA12877_ch_G0000664;gene_biotype=processed_pseudogene;gene_name=ENSG00000279115;gene_sources=liftoff;ID=NA12877_ch_G0000664;Name=ENSG00000279115
NA12877_chrY	CAT	transcript	26007551	26007625	1000	+	.	source_transcript=ENST00000624491.2;source_transcript_name=ENST00000624491;source_gene=ENSG00000279115.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279115.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624491.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624491.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279115;alternative_source_transcripts=ENST00000624491.2;transcript_id=NA12877_ch_T0001825;gene_id=NA12877_ch_G0000664;Parent=NA12877_ch_G0000664;transcript_name=NA12877_ch_T0001825;gene_name=ENSG00000279115;ID=NA12877_ch_T0001825;Name=ENSG00000279115
NA12877_chrY	CAT	exon	26007551	26007625	.	+	.	source_transcript=ENST00000624491.2;source_transcript_name=ENST00000624491;source_gene=ENSG00000279115.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279115.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624491.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624491.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279115;alternative_source_transcripts=ENST00000624491.2;transcript_id=NA12877_ch_T0001825;gene_id=NA12877_ch_G0000664;Parent=NA12877_ch_T0001825;transcript_name=NA12877_ch_T0001825;gene_name=ENSG00000279115;ID=exon:NA12877_ch_T0001825:0;Name=ENSG00000279115;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26077378	26094541	.	-	.	source_gene_common_name=SEPTIN14P23;source_gene=ENSG00000228786.7;alternative_source_transcripts=ENST00000427373.6;gene_id=NA12877_ch_G0000665;gene_biotype=lncRNA;gene_name=SEPTIN14P23;gene_sources=liftoff;ID=NA12877_ch_G0000665;Name=SEPTIN14P23
NA12877_chrY	CAT	transcript	26077378	26094541	1000	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=ENST00000427373.6;transcript_id=NA12877_ch_T0001826;gene_id=NA12877_ch_G0000665;Parent=NA12877_ch_G0000665;transcript_name=NA12877_ch_T0001826;gene_name=SEPTIN14P23;ID=NA12877_ch_T0001826;Name=SEPTIN14P23
NA12877_chrY	CAT	exon	26077378	26078699	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=ENST00000427373.6;transcript_id=NA12877_ch_T0001826;gene_id=NA12877_ch_G0000665;Parent=NA12877_ch_T0001826;transcript_name=NA12877_ch_T0001826;gene_name=SEPTIN14P23;ID=exon:NA12877_ch_T0001826:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26078700	26086737	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=ENST00000427373.6;transcript_id=NA12877_ch_T0001826;gene_id=NA12877_ch_G0000665;Parent=NA12877_ch_T0001826;transcript_name=NA12877_ch_T0001826;gene_name=SEPTIN14P23;ID=intron:NA12877_ch_T0001826:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26086738	26086906	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=ENST00000427373.6;transcript_id=NA12877_ch_T0001826;gene_id=NA12877_ch_G0000665;Parent=NA12877_ch_T0001826;transcript_name=NA12877_ch_T0001826;gene_name=SEPTIN14P23;ID=exon:NA12877_ch_T0001826:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26086907	26094447	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=ENST00000427373.6;transcript_id=NA12877_ch_T0001826;gene_id=NA12877_ch_G0000665;Parent=NA12877_ch_T0001826;transcript_name=NA12877_ch_T0001826;gene_name=SEPTIN14P23;ID=intron:NA12877_ch_T0001826:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26094448	26094541	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=ENST00000427373.6;transcript_id=NA12877_ch_T0001826;gene_id=NA12877_ch_G0000665;Parent=NA12877_ch_T0001826;transcript_name=NA12877_ch_T0001826;gene_name=SEPTIN14P23;ID=exon:NA12877_ch_T0001826:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26088813	26091632	.	+	.	source_gene_common_name=CICP1;source_gene=ENSG00000233652.1;alternative_source_transcripts=ENST00000416803.1,ENST00000416803.1;gene_id=NA12877_ch_G0000666;gene_biotype=processed_pseudogene;gene_name=CICP1;gene_sources=liftoff;ID=NA12877_ch_G0000666;Name=CICP1
NA12877_chrY	CAT	transcript	26088813	26091632	1000	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;alternative_source_transcripts=ENST00000416803.1,ENST00000416803.1;transcript_id=NA12877_ch_T0001827;gene_id=NA12877_ch_G0000666;Parent=NA12877_ch_G0000666;transcript_name=NA12877_ch_T0001827;gene_name=CICP1;ID=NA12877_ch_T0001827;Name=CICP1
NA12877_chrY	CAT	exon	26088813	26091095	.	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;alternative_source_transcripts=ENST00000416803.1,ENST00000416803.1;transcript_id=NA12877_ch_T0001827;gene_id=NA12877_ch_G0000666;Parent=NA12877_ch_T0001827;transcript_name=NA12877_ch_T0001827;gene_name=CICP1;ID=exon:NA12877_ch_T0001827:0;Name=CICP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26091096	26091505	.	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;alternative_source_transcripts=ENST00000416803.1,ENST00000416803.1;transcript_id=NA12877_ch_T0001827;gene_id=NA12877_ch_G0000666;Parent=NA12877_ch_T0001827;transcript_name=NA12877_ch_T0001827;gene_name=CICP1;ID=intron:NA12877_ch_T0001827:0;Name=CICP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26091506	26091632	.	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;alternative_source_transcripts=ENST00000416803.1,ENST00000416803.1;transcript_id=NA12877_ch_T0001827;gene_id=NA12877_ch_G0000666;Parent=NA12877_ch_T0001827;transcript_name=NA12877_ch_T0001827;gene_name=CICP1;ID=exon:NA12877_ch_T0001827:1;Name=CICP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26092975	26093878	.	-	.	source_gene_common_name=LINC00265-3P;source_gene=ENSG00000233944.1;alternative_source_transcripts=ENST00000447588.1;gene_id=NA12877_ch_G0000667;gene_biotype=processed_pseudogene;gene_name=LINC00265-3P;gene_sources=liftoff;ID=NA12877_ch_G0000667;Name=LINC00265-3P
NA12877_chrY	CAT	transcript	26092975	26093878	1000	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447588.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;alternative_source_transcripts=ENST00000447588.1;transcript_id=NA12877_ch_T0001828;gene_id=NA12877_ch_G0000667;Parent=NA12877_ch_G0000667;transcript_name=NA12877_ch_T0001828;gene_name=LINC00265-3P;ID=NA12877_ch_T0001828;Name=LINC00265-3P
NA12877_chrY	CAT	exon	26092975	26093878	.	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447588.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;alternative_source_transcripts=ENST00000447588.1;transcript_id=NA12877_ch_T0001828;gene_id=NA12877_ch_G0000667;Parent=NA12877_ch_T0001828;transcript_name=NA12877_ch_T0001828;gene_name=LINC00265-3P;ID=exon:NA12877_ch_T0001828:0;Name=LINC00265-3P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26130977	26137136	.	+	.	source_gene_common_name=UBE2Q2P5Y;source_gene=ENSG00000223636.1;alternative_source_transcripts=ENST00000413867.1;gene_id=NA12877_ch_G0000668;gene_biotype=unprocessed_pseudogene;gene_name=UBE2Q2P5Y;gene_sources=liftoff;ID=NA12877_ch_G0000668;Name=UBE2Q2P5Y
NA12877_chrY	CAT	transcript	26130977	26137136	1000	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=NA12877_ch_T0001829;gene_id=NA12877_ch_G0000668;Parent=NA12877_ch_G0000668;transcript_name=NA12877_ch_T0001829;gene_name=UBE2Q2P5Y;ID=NA12877_ch_T0001829;Name=UBE2Q2P5Y
NA12877_chrY	CAT	exon	26130977	26131078	.	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=NA12877_ch_T0001829;gene_id=NA12877_ch_G0000668;Parent=NA12877_ch_T0001829;transcript_name=NA12877_ch_T0001829;gene_name=UBE2Q2P5Y;ID=exon:NA12877_ch_T0001829:0;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26131079	26137031	.	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=NA12877_ch_T0001829;gene_id=NA12877_ch_G0000668;Parent=NA12877_ch_T0001829;transcript_name=NA12877_ch_T0001829;gene_name=UBE2Q2P5Y;ID=intron:NA12877_ch_T0001829:0;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26137032	26137136	.	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=NA12877_ch_T0001829;gene_id=NA12877_ch_G0000668;Parent=NA12877_ch_T0001829;transcript_name=NA12877_ch_T0001829;gene_name=UBE2Q2P5Y;ID=exon:NA12877_ch_T0001829:1;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26154382	26160393	.	+	.	source_gene_common_name=GOLGA2P3Y;source_gene=ENSG00000172297.7;gene_id=NA12877_ch_G0000669;gene_biotype=unprocessed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff,transMap;ID=NA12877_ch_G0000669;Name=GOLGA2P3Y
NA12877_chrY	CAT	transcript	26154382	26160393	1000	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_G0000669;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=NA12877_ch_T0001830;Name=GOLGA2P3Y
NA12877_chrY	CAT	exon	26154382	26154501	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001830:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26154502	26155114	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001830:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26155115	26155174	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001830:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26155175	26155360	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001830:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26155361	26155439	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001830:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26155440	26156558	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001830:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26156559	26156908	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001830:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26156909	26157206	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001830:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26157207	26157264	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001830:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26157265	26158294	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001830:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26158295	26158695	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001830:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26158696	26159115	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001830:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26159116	26159204	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001830:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26159205	26159459	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001830:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26159460	26159648	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001830:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26159649	26159737	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001830:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26159738	26159830	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001830:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26159831	26159912	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001830:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26159913	26160003	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001830:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26160004	26160085	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001830:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26160086	26160241	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001830:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26160242	26160331	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001830:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26160332	26160393	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=transMap;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001830;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001830;transcript_name=NA12877_ch_T0001830;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001830:11;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26154382	26160393	1000	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_G0000669;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=NA12877_ch_T0001831;Name=GOLGA2P3Y
NA12877_chrY	CAT	exon	26154382	26154501	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26154502	26155114	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26155115	26155174	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26155175	26155360	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26155361	26155439	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26155440	26156558	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26156559	26156908	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26156909	26157206	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26157207	26157264	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26157265	26158294	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26158295	26158364	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26158365	26158383	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26158384	26158544	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26158545	26158620	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26158621	26158695	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26158696	26159115	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26159116	26159204	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26159205	26159459	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26159460	26159648	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26159649	26159737	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26159738	26159830	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26159831	26159912	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26159913	26160003	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:11;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26160004	26160085	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:11;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26160086	26160241	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:12;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26160242	26160331	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=intron:NA12877_ch_T0001831:12;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26160332	26160393	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=NA12877_ch_T0001831;gene_id=NA12877_ch_G0000669;Parent=NA12877_ch_T0001831;transcript_name=NA12877_ch_T0001831;gene_name=GOLGA2P3Y;ID=exon:NA12877_ch_T0001831:13;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26158747	26159005	.	+	.	source_gene_common_name=RN7SL725P;source_gene=ENSG00000278242.1;alternative_source_transcripts=ENST00000606439.2;gene_id=NA12877_ch_G0000670;gene_biotype=misc_RNA;gene_name=RN7SL725P;gene_sources=liftoff;ID=NA12877_ch_G0000670;Name=RN7SL725P
NA12877_chrY	CAT	transcript	26158747	26159005	1000	+	.	source_transcript=ENST00000606439.2;source_transcript_name=RN7SL725P-201;source_gene=ENSG00000278242.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278242.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000606439.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000606439.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL725P;alternative_source_transcripts=ENST00000606439.2;transcript_id=NA12877_ch_T0001832;gene_id=NA12877_ch_G0000670;Parent=NA12877_ch_G0000670;transcript_name=NA12877_ch_T0001832;gene_name=RN7SL725P;ID=NA12877_ch_T0001832;Name=RN7SL725P
NA12877_chrY	CAT	exon	26158747	26159005	.	+	.	source_transcript=ENST00000606439.2;source_transcript_name=RN7SL725P-201;source_gene=ENSG00000278242.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278242.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000606439.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000606439.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL725P;alternative_source_transcripts=ENST00000606439.2;transcript_id=NA12877_ch_T0001832;gene_id=NA12877_ch_G0000670;Parent=NA12877_ch_T0001832;transcript_name=NA12877_ch_T0001832;gene_name=RN7SL725P;ID=exon:NA12877_ch_T0001832:0;Name=RN7SL725P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26163831	26173447	.	+	.	source_gene_common_name=ENSG00000284380;source_gene=ENSG00000284380.1;gene_id=NA12877_ch_G0000671;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000284380;gene_sources=liftoff;ID=NA12877_ch_G0000671;Name=ENSG00000284380
NA12877_chrY	CAT	transcript	26163831	26173447	1000	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=NA12877_ch_T0001833;gene_id=NA12877_ch_G0000671;Parent=NA12877_ch_G0000671;transcript_name=NA12877_ch_T0001833;gene_name=ENSG00000284380;ID=NA12877_ch_T0001833;Name=ENSG00000284380
NA12877_chrY	CAT	exon	26163831	26163915	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=NA12877_ch_T0001833;gene_id=NA12877_ch_G0000671;Parent=NA12877_ch_T0001833;transcript_name=NA12877_ch_T0001833;gene_name=ENSG00000284380;ID=exon:NA12877_ch_T0001833:0;Name=ENSG00000284380;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26163916	26165336	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=NA12877_ch_T0001833;gene_id=NA12877_ch_G0000671;Parent=NA12877_ch_T0001833;transcript_name=NA12877_ch_T0001833;gene_name=ENSG00000284380;ID=intron:NA12877_ch_T0001833:0;Name=ENSG00000284380;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26165337	26165486	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=NA12877_ch_T0001833;gene_id=NA12877_ch_G0000671;Parent=NA12877_ch_T0001833;transcript_name=NA12877_ch_T0001833;gene_name=ENSG00000284380;ID=exon:NA12877_ch_T0001833:1;Name=ENSG00000284380;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26165487	26173285	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=NA12877_ch_T0001833;gene_id=NA12877_ch_G0000671;Parent=NA12877_ch_T0001833;transcript_name=NA12877_ch_T0001833;gene_name=ENSG00000284380;ID=intron:NA12877_ch_T0001833:1;Name=ENSG00000284380;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26173286	26173447	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=NA12877_ch_T0001833;gene_id=NA12877_ch_G0000671;Parent=NA12877_ch_T0001833;transcript_name=NA12877_ch_T0001833;gene_name=ENSG00000284380;ID=exon:NA12877_ch_T0001833:2;Name=ENSG00000284380;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26163923	26173506	.	+	.	source_gene_common_name=ENSG00000310249;source_gene=ENSG00000310249.1;gene_id=NA12877_ch_G0000672;gene_biotype=lncRNA;gene_name=ENSG00000310249;gene_sources=liftoff;ID=NA12877_ch_G0000672;Name=ENSG00000310249
NA12877_chrY	CAT	transcript	26163923	26173506	1000	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001834;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_G0000672;transcript_name=NA12877_ch_T0001834;gene_name=ENSG00000310249;ID=NA12877_ch_T0001834;Name=ENSG00000310249
NA12877_chrY	CAT	exon	26163923	26164290	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001834;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001834;transcript_name=NA12877_ch_T0001834;gene_name=ENSG00000310249;ID=exon:NA12877_ch_T0001834:0;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26164291	26165336	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001834;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001834;transcript_name=NA12877_ch_T0001834;gene_name=ENSG00000310249;ID=intron:NA12877_ch_T0001834:0;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26165337	26165486	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001834;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001834;transcript_name=NA12877_ch_T0001834;gene_name=ENSG00000310249;ID=exon:NA12877_ch_T0001834:1;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26165487	26173285	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001834;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001834;transcript_name=NA12877_ch_T0001834;gene_name=ENSG00000310249;ID=intron:NA12877_ch_T0001834:1;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26173286	26173506	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001834;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001834;transcript_name=NA12877_ch_T0001834;gene_name=ENSG00000310249;ID=exon:NA12877_ch_T0001834:2;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26164179	26173506	1000	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001835;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_G0000672;transcript_name=NA12877_ch_T0001835;gene_name=ENSG00000310249;ID=NA12877_ch_T0001835;Name=ENSG00000310249
NA12877_chrY	CAT	exon	26164179	26164290	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001835;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001835;transcript_name=NA12877_ch_T0001835;gene_name=ENSG00000310249;ID=exon:NA12877_ch_T0001835:0;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26164291	26165307	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001835;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001835;transcript_name=NA12877_ch_T0001835;gene_name=ENSG00000310249;ID=intron:NA12877_ch_T0001835:0;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26165308	26165486	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001835;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001835;transcript_name=NA12877_ch_T0001835;gene_name=ENSG00000310249;ID=exon:NA12877_ch_T0001835:1;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26165487	26173285	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001835;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001835;transcript_name=NA12877_ch_T0001835;gene_name=ENSG00000310249;ID=intron:NA12877_ch_T0001835:1;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26173286	26173506	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001835;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001835;transcript_name=NA12877_ch_T0001835;gene_name=ENSG00000310249;ID=exon:NA12877_ch_T0001835:2;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26165307	26173385	1000	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001836;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_G0000672;transcript_name=NA12877_ch_T0001836;gene_name=ENSG00000310249;ID=NA12877_ch_T0001836;Name=ENSG00000310249
NA12877_chrY	CAT	exon	26165307	26165486	.	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001836;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001836;transcript_name=NA12877_ch_T0001836;gene_name=ENSG00000310249;ID=exon:NA12877_ch_T0001836:0;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26165487	26173285	.	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001836;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001836;transcript_name=NA12877_ch_T0001836;gene_name=ENSG00000310249;ID=intron:NA12877_ch_T0001836:0;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26173286	26173385	.	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=NA12877_ch_T0001836;gene_id=NA12877_ch_G0000672;Parent=NA12877_ch_T0001836;transcript_name=NA12877_ch_T0001836;gene_name=ENSG00000310249;ID=exon:NA12877_ch_T0001836:1;Name=ENSG00000310249;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26178095	26183456	.	+	.	source_gene_common_name=CSPG4P4Y;source_gene=ENSG00000172294.7;gene_id=NA12877_ch_G0000673;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CSPG4P4Y;gene_sources=liftoff;ID=NA12877_ch_G0000673;Name=CSPG4P4Y
NA12877_chrY	CAT	transcript	26178095	26183456	1000	+	.	source_transcript=ENST00000333235.3;source_transcript_name=CSPG4P4Y-201;source_gene=ENSG00000172294.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172294.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000333235.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000333235.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P4Y;transcript_id=NA12877_ch_T0001837;gene_id=NA12877_ch_G0000673;Parent=NA12877_ch_G0000673;transcript_name=NA12877_ch_T0001837;gene_name=CSPG4P4Y;ID=NA12877_ch_T0001837;Name=CSPG4P4Y
NA12877_chrY	CAT	exon	26178095	26178258	.	+	.	source_transcript=ENST00000333235.3;source_transcript_name=CSPG4P4Y-201;source_gene=ENSG00000172294.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172294.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000333235.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000333235.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P4Y;transcript_id=NA12877_ch_T0001837;gene_id=NA12877_ch_G0000673;Parent=NA12877_ch_T0001837;transcript_name=NA12877_ch_T0001837;gene_name=CSPG4P4Y;ID=exon:NA12877_ch_T0001837:0;Name=CSPG4P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26178259	26179896	.	+	.	source_transcript=ENST00000333235.3;source_transcript_name=CSPG4P4Y-201;source_gene=ENSG00000172294.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172294.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000333235.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000333235.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P4Y;transcript_id=NA12877_ch_T0001837;gene_id=NA12877_ch_G0000673;Parent=NA12877_ch_T0001837;transcript_name=NA12877_ch_T0001837;gene_name=CSPG4P4Y;ID=intron:NA12877_ch_T0001837:0;Name=CSPG4P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26179897	26183456	.	+	.	source_transcript=ENST00000333235.3;source_transcript_name=CSPG4P4Y-201;source_gene=ENSG00000172294.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172294.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000333235.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000333235.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P4Y;transcript_id=NA12877_ch_T0001837;gene_id=NA12877_ch_G0000673;Parent=NA12877_ch_T0001837;transcript_name=NA12877_ch_T0001837;gene_name=CSPG4P4Y;ID=exon:NA12877_ch_T0001837:1;Name=CSPG4P4Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26182734	26186531	.	+	.	source_gene_common_name=CSPG4P1Y;source_gene=ENSG00000240450.1;gene_id=NA12877_ch_G0000674;gene_biotype=lncRNA;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=NA12877_ch_G0000674;Name=CSPG4P1Y
NA12877_chrY	CAT	transcript	26182734	26186531	1000	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA12877_ch_T0001838;gene_id=NA12877_ch_G0000674;Parent=NA12877_ch_G0000674;transcript_name=NA12877_ch_T0001838;gene_name=CSPG4P1Y;ID=NA12877_ch_T0001838;Name=CSPG4P1Y
NA12877_chrY	CAT	exon	26182734	26183456	.	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA12877_ch_T0001838;gene_id=NA12877_ch_G0000674;Parent=NA12877_ch_T0001838;transcript_name=NA12877_ch_T0001838;gene_name=CSPG4P1Y;ID=exon:NA12877_ch_T0001838:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26183457	26186459	.	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA12877_ch_T0001838;gene_id=NA12877_ch_G0000674;Parent=NA12877_ch_T0001838;transcript_name=NA12877_ch_T0001838;gene_name=CSPG4P1Y;ID=intron:NA12877_ch_T0001838:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26186460	26186531	.	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA12877_ch_T0001838;gene_id=NA12877_ch_G0000674;Parent=NA12877_ch_T0001838;transcript_name=NA12877_ch_T0001838;gene_name=CSPG4P1Y;ID=exon:NA12877_ch_T0001838:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26186466	26187148	.	+	.	source_gene_common_name=DNM1P48;source_gene=ENSG00000239304.1;gene_id=NA12877_ch_G0000675;gene_biotype=transcribed_processed_pseudogene;gene_name=DNM1P48;gene_sources=liftoff;ID=NA12877_ch_G0000675;Name=DNM1P48
NA12877_chrY	CAT	transcript	26186466	26187148	1000	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=NA12877_ch_T0001839;gene_id=NA12877_ch_G0000675;Parent=NA12877_ch_G0000675;transcript_name=NA12877_ch_T0001839;gene_name=DNM1P48;ID=NA12877_ch_T0001839;Name=DNM1P48
NA12877_chrY	CAT	exon	26186466	26186691	.	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=NA12877_ch_T0001839;gene_id=NA12877_ch_G0000675;Parent=NA12877_ch_T0001839;transcript_name=NA12877_ch_T0001839;gene_name=DNM1P48;ID=exon:NA12877_ch_T0001839:0;Name=DNM1P48;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26186692	26186935	.	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=NA12877_ch_T0001839;gene_id=NA12877_ch_G0000675;Parent=NA12877_ch_T0001839;transcript_name=NA12877_ch_T0001839;gene_name=DNM1P48;ID=intron:NA12877_ch_T0001839:0;Name=DNM1P48;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26186936	26187148	.	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=NA12877_ch_T0001839;gene_id=NA12877_ch_G0000675;Parent=NA12877_ch_T0001839;transcript_name=NA12877_ch_T0001839;gene_name=DNM1P48;ID=exon:NA12877_ch_T0001839:1;Name=DNM1P48;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26187110	26187488	.	-	.	source_gene_common_name=ENSG00000233619;source_gene=ENSG00000233619.1;alternative_source_transcripts=ENST00000437571.1,ENST00000437571.1;gene_id=NA12877_ch_G0000676;gene_biotype=processed_pseudogene;gene_name=ENSG00000233619;gene_sources=liftoff;ID=NA12877_ch_G0000676;Name=ENSG00000233619
NA12877_chrY	CAT	transcript	26187110	26187488	1000	-	.	source_transcript=ENST00000437571.1;source_transcript_name=ENST00000437571;source_gene=ENSG00000233619.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233619.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000437571.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437571.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000233619;alternative_source_transcripts=ENST00000437571.1,ENST00000437571.1;transcript_id=NA12877_ch_T0001840;gene_id=NA12877_ch_G0000676;Parent=NA12877_ch_G0000676;transcript_name=NA12877_ch_T0001840;gene_name=ENSG00000233619;ID=NA12877_ch_T0001840;Name=ENSG00000233619
NA12877_chrY	CAT	exon	26187110	26187488	.	-	.	source_transcript=ENST00000437571.1;source_transcript_name=ENST00000437571;source_gene=ENSG00000233619.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233619.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000437571.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437571.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000233619;alternative_source_transcripts=ENST00000437571.1,ENST00000437571.1;transcript_id=NA12877_ch_T0001840;gene_id=NA12877_ch_G0000676;Parent=NA12877_ch_T0001840;transcript_name=NA12877_ch_T0001840;gene_name=ENSG00000233619;ID=exon:NA12877_ch_T0001840:0;Name=ENSG00000233619;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26192756	26198339	.	-	.	source_gene_common_name=ENSG00000307363;source_gene=ENSG00000307363.1;gene_id=NA12877_ch_G0000677;gene_biotype=lncRNA;gene_name=ENSG00000307363;gene_sources=liftoff;ID=NA12877_ch_G0000677;Name=ENSG00000307363
NA12877_chrY	CAT	transcript	26192756	26198166	1000	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001841;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001841;gene_name=ENSG00000307363;ID=NA12877_ch_T0001841;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26192756	26195609	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001841;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001841;transcript_name=NA12877_ch_T0001841;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001841:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001841;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001841;transcript_name=NA12877_ch_T0001841;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001841:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001841;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001841;transcript_name=NA12877_ch_T0001841;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001841:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196973	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001841;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001841;transcript_name=NA12877_ch_T0001841;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001841:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196974	26197034	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001841;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001841;transcript_name=NA12877_ch_T0001841;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001841:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197301	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001841;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001841;transcript_name=NA12877_ch_T0001841;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001841:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197302	26198166	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001841;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001841;transcript_name=NA12877_ch_T0001841;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001841:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195043	26197909	1000	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001842;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001842;gene_name=ENSG00000307363;ID=NA12877_ch_T0001842;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195043	26195609	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001842;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001842;transcript_name=NA12877_ch_T0001842;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001842:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001842;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001842;transcript_name=NA12877_ch_T0001842;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001842:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001842;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001842;transcript_name=NA12877_ch_T0001842;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001842:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196956	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001842;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001842;transcript_name=NA12877_ch_T0001842;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001842:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196957	26197034	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001842;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001842;transcript_name=NA12877_ch_T0001842;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001842:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197301	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001842;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001842;transcript_name=NA12877_ch_T0001842;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001842:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197302	26197909	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001842;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001842;transcript_name=NA12877_ch_T0001842;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001842:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195444	26196168	1000	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001843;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001843;gene_name=ENSG00000307363;ID=NA12877_ch_T0001843;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195444	26195609	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001843;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001843;transcript_name=NA12877_ch_T0001843;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001843:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001843;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001843;transcript_name=NA12877_ch_T0001843;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001843:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26196168	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001843;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001843;transcript_name=NA12877_ch_T0001843;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001843:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195445	26198339	1000	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001844;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001844;gene_name=ENSG00000307363;ID=NA12877_ch_T0001844;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195445	26195609	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001844;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001844;transcript_name=NA12877_ch_T0001844;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001844:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001844;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001844;transcript_name=NA12877_ch_T0001844;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001844:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001844;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001844;transcript_name=NA12877_ch_T0001844;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001844:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196795	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001844;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001844;transcript_name=NA12877_ch_T0001844;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001844:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196796	26197034	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001844;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001844;transcript_name=NA12877_ch_T0001844;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001844:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26198258	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001844;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001844;transcript_name=NA12877_ch_T0001844;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001844:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26198259	26198339	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001844;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001844;transcript_name=NA12877_ch_T0001844;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001844:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195445	26197536	1000	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001845;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001845;gene_name=ENSG00000307363;ID=NA12877_ch_T0001845;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195445	26195609	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001845;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001845;transcript_name=NA12877_ch_T0001845;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001845:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001845;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001845;transcript_name=NA12877_ch_T0001845;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001845:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001845;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001845;transcript_name=NA12877_ch_T0001845;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001845:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196795	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001845;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001845;transcript_name=NA12877_ch_T0001845;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001845:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196796	26197034	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001845;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001845;transcript_name=NA12877_ch_T0001845;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001845:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197301	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001845;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001845;transcript_name=NA12877_ch_T0001845;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001845:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197302	26197536	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001845;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001845;transcript_name=NA12877_ch_T0001845;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001845:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195445	26197319	1000	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001846;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001846;gene_name=ENSG00000307363;ID=NA12877_ch_T0001846;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195445	26195609	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001846;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001846;transcript_name=NA12877_ch_T0001846;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001846:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001846;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001846;transcript_name=NA12877_ch_T0001846;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001846:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001846;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001846;transcript_name=NA12877_ch_T0001846;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001846:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196795	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001846;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001846;transcript_name=NA12877_ch_T0001846;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001846:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196796	26197034	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001846;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001846;transcript_name=NA12877_ch_T0001846;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001846:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197145	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001846;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001846;transcript_name=NA12877_ch_T0001846;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001846:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197146	26197319	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001846;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001846;transcript_name=NA12877_ch_T0001846;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001846:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195445	26197689	1000	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001847;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001847;gene_name=ENSG00000307363;ID=NA12877_ch_T0001847;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195445	26195609	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001847;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001847;transcript_name=NA12877_ch_T0001847;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001847:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001847;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001847;transcript_name=NA12877_ch_T0001847;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001847:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001847;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001847;transcript_name=NA12877_ch_T0001847;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001847:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196956	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001847;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001847;transcript_name=NA12877_ch_T0001847;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001847:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196957	26197034	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001847;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001847;transcript_name=NA12877_ch_T0001847;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001847:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197572	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001847;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001847;transcript_name=NA12877_ch_T0001847;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001847:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197573	26197689	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001847;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001847;transcript_name=NA12877_ch_T0001847;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001847:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195445	26197655	1000	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001848;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001848;gene_name=ENSG00000307363;ID=NA12877_ch_T0001848;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195445	26195609	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001848;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001848;transcript_name=NA12877_ch_T0001848;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001848:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001848;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001848;transcript_name=NA12877_ch_T0001848;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001848:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001848;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001848;transcript_name=NA12877_ch_T0001848;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001848:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196973	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001848;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001848;transcript_name=NA12877_ch_T0001848;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001848:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196974	26197034	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001848;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001848;transcript_name=NA12877_ch_T0001848;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001848:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197472	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001848;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001848;transcript_name=NA12877_ch_T0001848;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001848:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197473	26197655	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001848;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001848;transcript_name=NA12877_ch_T0001848;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001848:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195445	26197737	1000	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001849;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001849;gene_name=ENSG00000307363;ID=NA12877_ch_T0001849;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195445	26195609	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001849;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001849;transcript_name=NA12877_ch_T0001849;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001849:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001849;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001849;transcript_name=NA12877_ch_T0001849;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001849:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001849;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001849;transcript_name=NA12877_ch_T0001849;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001849:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196795	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001849;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001849;transcript_name=NA12877_ch_T0001849;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001849:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196796	26197034	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001849;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001849;transcript_name=NA12877_ch_T0001849;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001849:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197572	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001849;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001849;transcript_name=NA12877_ch_T0001849;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001849:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197573	26197737	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001849;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001849;transcript_name=NA12877_ch_T0001849;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001849:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195445	26197634	1000	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001850;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001850;gene_name=ENSG00000307363;ID=NA12877_ch_T0001850;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195445	26195609	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001850;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001850;transcript_name=NA12877_ch_T0001850;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001850:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001850;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001850;transcript_name=NA12877_ch_T0001850;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001850:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001850;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001850;transcript_name=NA12877_ch_T0001850;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001850:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196795	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001850;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001850;transcript_name=NA12877_ch_T0001850;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001850:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196796	26197034	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001850;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001850;transcript_name=NA12877_ch_T0001850;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001850:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197472	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001850;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001850;transcript_name=NA12877_ch_T0001850;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001850:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197473	26197634	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001850;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001850;transcript_name=NA12877_ch_T0001850;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001850:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195445	26197319	1000	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001851;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001851;gene_name=ENSG00000307363;ID=NA12877_ch_T0001851;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195445	26195609	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001851;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001851;transcript_name=NA12877_ch_T0001851;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001851:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001851;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001851;transcript_name=NA12877_ch_T0001851;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001851:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001851;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001851;transcript_name=NA12877_ch_T0001851;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001851:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196956	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001851;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001851;transcript_name=NA12877_ch_T0001851;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001851:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196957	26197034	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001851;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001851;transcript_name=NA12877_ch_T0001851;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001851:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197145	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001851;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001851;transcript_name=NA12877_ch_T0001851;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001851:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197146	26197319	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001851;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001851;transcript_name=NA12877_ch_T0001851;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001851:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195445	26198325	1000	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001852;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001852;gene_name=ENSG00000307363;ID=NA12877_ch_T0001852;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195445	26195609	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001852;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001852;transcript_name=NA12877_ch_T0001852;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001852:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001852;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001852;transcript_name=NA12877_ch_T0001852;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001852:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001852;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001852;transcript_name=NA12877_ch_T0001852;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001852:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196973	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001852;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001852;transcript_name=NA12877_ch_T0001852;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001852:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196974	26197034	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001852;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001852;transcript_name=NA12877_ch_T0001852;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001852:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26198258	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001852;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001852;transcript_name=NA12877_ch_T0001852;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001852:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26198259	26198325	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001852;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001852;transcript_name=NA12877_ch_T0001852;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001852:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195445	26197745	1000	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001853;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001853;gene_name=ENSG00000307363;ID=NA12877_ch_T0001853;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195445	26195609	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001853;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001853;transcript_name=NA12877_ch_T0001853;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001853:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001853;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001853;transcript_name=NA12877_ch_T0001853;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001853:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001853;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001853;transcript_name=NA12877_ch_T0001853;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001853:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196973	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001853;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001853;transcript_name=NA12877_ch_T0001853;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001853:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196974	26197034	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001853;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001853;transcript_name=NA12877_ch_T0001853;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001853:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197572	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001853;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001853;transcript_name=NA12877_ch_T0001853;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001853:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197573	26197745	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001853;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001853;transcript_name=NA12877_ch_T0001853;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001853:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195445	26197413	1000	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001854;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001854;gene_name=ENSG00000307363;ID=NA12877_ch_T0001854;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195445	26195609	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001854;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001854;transcript_name=NA12877_ch_T0001854;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001854:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001854;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001854;transcript_name=NA12877_ch_T0001854;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001854:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001854;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001854;transcript_name=NA12877_ch_T0001854;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001854:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196973	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001854;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001854;transcript_name=NA12877_ch_T0001854;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001854:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196974	26197034	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001854;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001854;transcript_name=NA12877_ch_T0001854;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001854:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197145	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001854;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001854;transcript_name=NA12877_ch_T0001854;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001854:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197146	26197413	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001854;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001854;transcript_name=NA12877_ch_T0001854;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001854:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195445	26197655	1000	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001855;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001855;gene_name=ENSG00000307363;ID=NA12877_ch_T0001855;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195445	26195609	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001855;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001855;transcript_name=NA12877_ch_T0001855;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001855:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001855;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001855;transcript_name=NA12877_ch_T0001855;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001855:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001855;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001855;transcript_name=NA12877_ch_T0001855;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001855:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196956	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001855;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001855;transcript_name=NA12877_ch_T0001855;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001855:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196957	26197034	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001855;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001855;transcript_name=NA12877_ch_T0001855;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001855:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197472	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001855;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001855;transcript_name=NA12877_ch_T0001855;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001855:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197473	26197655	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001855;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001855;transcript_name=NA12877_ch_T0001855;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001855:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26195446	26197575	1000	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001856;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_G0000677;transcript_name=NA12877_ch_T0001856;gene_name=ENSG00000307363;ID=NA12877_ch_T0001856;Name=ENSG00000307363
NA12877_chrY	CAT	exon	26195446	26195609	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001856;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001856;transcript_name=NA12877_ch_T0001856;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001856:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195610	26195818	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001856;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001856;transcript_name=NA12877_ch_T0001856;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001856:0;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195819	26195933	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001856;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001856;transcript_name=NA12877_ch_T0001856;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001856:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195934	26196795	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001856;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001856;transcript_name=NA12877_ch_T0001856;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001856:1;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196796	26197034	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001856;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001856;transcript_name=NA12877_ch_T0001856;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001856:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197386	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001856;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001856;transcript_name=NA12877_ch_T0001856;gene_name=ENSG00000307363;ID=intron:NA12877_ch_T0001856:2;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197387	26197575	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=NA12877_ch_T0001856;gene_id=NA12877_ch_G0000677;Parent=NA12877_ch_T0001856;transcript_name=NA12877_ch_T0001856;gene_name=ENSG00000307363;ID=exon:NA12877_ch_T0001856:3;Name=ENSG00000307363;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26195477	26201784	.	-	.	source_gene_common_name=GOLGA6L16P;source_gene=ENSG00000197092.5;gene_id=NA12877_ch_G0000678;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA6L16P;gene_sources=liftoff;ID=NA12877_ch_G0000678;Name=GOLGA6L16P
NA12877_chrY	CAT	transcript	26195477	26201784	1000	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_G0000678;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=NA12877_ch_T0001857;Name=GOLGA6L16P
NA12877_chrY	CAT	exon	26195477	26195608	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=exon:NA12877_ch_T0001857:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195609	26195817	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=intron:NA12877_ch_T0001857:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26195818	26195941	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=exon:NA12877_ch_T0001857:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26195942	26196963	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=intron:NA12877_ch_T0001857:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26196964	26197034	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=exon:NA12877_ch_T0001857:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197035	26197301	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=intron:NA12877_ch_T0001857:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26197302	26197871	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=exon:NA12877_ch_T0001857:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26197872	26198276	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=intron:NA12877_ch_T0001857:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26198277	26198333	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=exon:NA12877_ch_T0001857:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26198334	26198989	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=intron:NA12877_ch_T0001857:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26198990	26199070	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=exon:NA12877_ch_T0001857:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26199071	26199255	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=intron:NA12877_ch_T0001857:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26199256	26199315	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=exon:NA12877_ch_T0001857:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26199316	26199937	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=intron:NA12877_ch_T0001857:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26199938	26200057	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=exon:NA12877_ch_T0001857:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26200058	26201700	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=intron:NA12877_ch_T0001857:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26201701	26201784	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=NA12877_ch_T0001857;gene_id=NA12877_ch_G0000678;Parent=NA12877_ch_T0001857;transcript_name=NA12877_ch_T0001857;gene_name=GOLGA6L16P;ID=exon:NA12877_ch_T0001857:8;Name=GOLGA6L16P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26212127	26227612	.	-	.	source_gene_common_name=ENSG00000235583;source_gene=ENSG00000235583.2;gene_id=NA12877_ch_G0000679;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000235583;gene_sources=liftoff;ID=NA12877_ch_G0000679;Name=ENSG00000235583
NA12877_chrY	CAT	transcript	26212127	26227612	1000	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=NA12877_ch_T0001858;gene_id=NA12877_ch_G0000679;Parent=NA12877_ch_G0000679;transcript_name=NA12877_ch_T0001858;gene_name=ENSG00000235583;ID=NA12877_ch_T0001858;Name=ENSG00000235583
NA12877_chrY	CAT	exon	26212127	26212222	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=NA12877_ch_T0001858;gene_id=NA12877_ch_G0000679;Parent=NA12877_ch_T0001858;transcript_name=NA12877_ch_T0001858;gene_name=ENSG00000235583;ID=exon:NA12877_ch_T0001858:0;Name=ENSG00000235583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26212223	26212950	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=NA12877_ch_T0001858;gene_id=NA12877_ch_G0000679;Parent=NA12877_ch_T0001858;transcript_name=NA12877_ch_T0001858;gene_name=ENSG00000235583;ID=intron:NA12877_ch_T0001858:0;Name=ENSG00000235583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26212951	26212999	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=NA12877_ch_T0001858;gene_id=NA12877_ch_G0000679;Parent=NA12877_ch_T0001858;transcript_name=NA12877_ch_T0001858;gene_name=ENSG00000235583;ID=exon:NA12877_ch_T0001858:1;Name=ENSG00000235583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26213000	26219504	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=NA12877_ch_T0001858;gene_id=NA12877_ch_G0000679;Parent=NA12877_ch_T0001858;transcript_name=NA12877_ch_T0001858;gene_name=ENSG00000235583;ID=intron:NA12877_ch_T0001858:1;Name=ENSG00000235583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26219505	26219563	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=NA12877_ch_T0001858;gene_id=NA12877_ch_G0000679;Parent=NA12877_ch_T0001858;transcript_name=NA12877_ch_T0001858;gene_name=ENSG00000235583;ID=exon:NA12877_ch_T0001858:2;Name=ENSG00000235583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26219564	26223846	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=NA12877_ch_T0001858;gene_id=NA12877_ch_G0000679;Parent=NA12877_ch_T0001858;transcript_name=NA12877_ch_T0001858;gene_name=ENSG00000235583;ID=intron:NA12877_ch_T0001858:2;Name=ENSG00000235583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26223847	26223936	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=NA12877_ch_T0001858;gene_id=NA12877_ch_G0000679;Parent=NA12877_ch_T0001858;transcript_name=NA12877_ch_T0001858;gene_name=ENSG00000235583;ID=exon:NA12877_ch_T0001858:3;Name=ENSG00000235583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26223937	26225029	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=NA12877_ch_T0001858;gene_id=NA12877_ch_G0000679;Parent=NA12877_ch_T0001858;transcript_name=NA12877_ch_T0001858;gene_name=ENSG00000235583;ID=intron:NA12877_ch_T0001858:3;Name=ENSG00000235583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26225030	26225114	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=NA12877_ch_T0001858;gene_id=NA12877_ch_G0000679;Parent=NA12877_ch_T0001858;transcript_name=NA12877_ch_T0001858;gene_name=ENSG00000235583;ID=exon:NA12877_ch_T0001858:4;Name=ENSG00000235583;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26225115	26227474	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=NA12877_ch_T0001858;gene_id=NA12877_ch_G0000679;Parent=NA12877_ch_T0001858;transcript_name=NA12877_ch_T0001858;gene_name=ENSG00000235583;ID=intron:NA12877_ch_T0001858:4;Name=ENSG00000235583;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26227475	26227612	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=NA12877_ch_T0001858;gene_id=NA12877_ch_G0000679;Parent=NA12877_ch_T0001858;transcript_name=NA12877_ch_T0001858;gene_name=ENSG00000235583;ID=exon:NA12877_ch_T0001858:5;Name=ENSG00000235583;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26217189	26232586	.	-	.	source_gene_common_name=ENSG00000304207;source_gene=ENSG00000304207.1;gene_id=NA12877_ch_G0000680;gene_biotype=lncRNA;gene_name=ENSG00000304207;gene_sources=liftoff;ID=NA12877_ch_G0000680;Name=ENSG00000304207
NA12877_chrY	CAT	transcript	26217189	26232585	1000	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001859;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_G0000680;transcript_name=NA12877_ch_T0001859;gene_name=ENSG00000304207;ID=NA12877_ch_T0001859;Name=ENSG00000304207
NA12877_chrY	CAT	exon	26217189	26217624	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001859;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001859;transcript_name=NA12877_ch_T0001859;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001859:0;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26217625	26223851	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001859;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001859;transcript_name=NA12877_ch_T0001859;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001859:0;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26223852	26223936	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001859;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001859;transcript_name=NA12877_ch_T0001859;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001859:1;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26223937	26225029	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001859;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001859;transcript_name=NA12877_ch_T0001859;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001859:1;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26225030	26225114	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001859;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001859;transcript_name=NA12877_ch_T0001859;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001859:2;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26225115	26227490	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001859;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001859;transcript_name=NA12877_ch_T0001859;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001859:2;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26227491	26227612	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001859;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001859;transcript_name=NA12877_ch_T0001859;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001859:3;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26227613	26231569	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001859;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001859;transcript_name=NA12877_ch_T0001859;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001859:3;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26231570	26231732	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001859;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001859;transcript_name=NA12877_ch_T0001859;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001859:4;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26231733	26232480	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001859;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001859;transcript_name=NA12877_ch_T0001859;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001859:4;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26232481	26232585	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001859;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001859;transcript_name=NA12877_ch_T0001859;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001859:5;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26217189	26232578	1000	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001860;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_G0000680;transcript_name=NA12877_ch_T0001860;gene_name=ENSG00000304207;ID=NA12877_ch_T0001860;Name=ENSG00000304207
NA12877_chrY	CAT	exon	26217189	26217624	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001860;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001860;transcript_name=NA12877_ch_T0001860;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001860:0;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26217625	26223851	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001860;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001860;transcript_name=NA12877_ch_T0001860;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001860:0;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26223852	26223936	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001860;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001860;transcript_name=NA12877_ch_T0001860;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001860:1;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26223937	26227490	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001860;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001860;transcript_name=NA12877_ch_T0001860;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001860:1;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26227491	26227612	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001860;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001860;transcript_name=NA12877_ch_T0001860;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001860:2;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26227613	26231569	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001860;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001860;transcript_name=NA12877_ch_T0001860;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001860:2;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26231570	26231732	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001860;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001860;transcript_name=NA12877_ch_T0001860;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001860:3;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26231733	26232480	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001860;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001860;transcript_name=NA12877_ch_T0001860;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001860:3;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26232481	26232578	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001860;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001860;transcript_name=NA12877_ch_T0001860;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001860:4;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26217189	26232586	1000	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001861;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_G0000680;transcript_name=NA12877_ch_T0001861;gene_name=ENSG00000304207;ID=NA12877_ch_T0001861;Name=ENSG00000304207
NA12877_chrY	CAT	exon	26217189	26217624	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001861;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001861;transcript_name=NA12877_ch_T0001861;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001861:0;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26217625	26223851	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001861;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001861;transcript_name=NA12877_ch_T0001861;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001861:0;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26223852	26223936	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001861;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001861;transcript_name=NA12877_ch_T0001861;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001861:1;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26223937	26227474	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001861;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001861;transcript_name=NA12877_ch_T0001861;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001861:1;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26227475	26227612	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001861;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001861;transcript_name=NA12877_ch_T0001861;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001861:2;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26227613	26232480	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001861;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001861;transcript_name=NA12877_ch_T0001861;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001861:2;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26232481	26232586	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001861;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001861;transcript_name=NA12877_ch_T0001861;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001861:3;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26217202	26232527	1000	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001862;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_G0000680;transcript_name=NA12877_ch_T0001862;gene_name=ENSG00000304207;ID=NA12877_ch_T0001862;Name=ENSG00000304207
NA12877_chrY	CAT	exon	26217202	26217624	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001862;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001862;transcript_name=NA12877_ch_T0001862;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001862:0;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26217625	26223851	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001862;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001862;transcript_name=NA12877_ch_T0001862;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001862:0;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26223852	26223936	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001862;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001862;transcript_name=NA12877_ch_T0001862;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001862:1;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26223937	26225029	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001862;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001862;transcript_name=NA12877_ch_T0001862;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001862:1;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26225030	26225114	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001862;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001862;transcript_name=NA12877_ch_T0001862;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001862:2;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26225115	26227474	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001862;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001862;transcript_name=NA12877_ch_T0001862;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001862:2;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26227475	26227612	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001862;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001862;transcript_name=NA12877_ch_T0001862;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001862:3;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26227613	26231569	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001862;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001862;transcript_name=NA12877_ch_T0001862;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001862:3;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26231570	26231732	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001862;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001862;transcript_name=NA12877_ch_T0001862;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001862:4;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26231733	26232480	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001862;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001862;transcript_name=NA12877_ch_T0001862;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001862:4;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26232481	26232527	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001862;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001862;transcript_name=NA12877_ch_T0001862;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001862:5;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26217202	26232569	1000	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001863;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_G0000680;transcript_name=NA12877_ch_T0001863;gene_name=ENSG00000304207;ID=NA12877_ch_T0001863;Name=ENSG00000304207
NA12877_chrY	CAT	exon	26217202	26217624	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001863;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001863;transcript_name=NA12877_ch_T0001863;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001863:0;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26217625	26223851	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001863;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001863;transcript_name=NA12877_ch_T0001863;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001863:0;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26223852	26223936	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001863;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001863;transcript_name=NA12877_ch_T0001863;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001863:1;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26223937	26225029	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001863;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001863;transcript_name=NA12877_ch_T0001863;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001863:1;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26225030	26225114	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001863;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001863;transcript_name=NA12877_ch_T0001863;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001863:2;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26225115	26227474	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001863;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001863;transcript_name=NA12877_ch_T0001863;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001863:2;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26227475	26227612	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001863;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001863;transcript_name=NA12877_ch_T0001863;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001863:3;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26227613	26232480	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001863;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001863;transcript_name=NA12877_ch_T0001863;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001863:3;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26232481	26232569	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001863;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001863;transcript_name=NA12877_ch_T0001863;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001863:4;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26217435	26231877	1000	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001864;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_G0000680;transcript_name=NA12877_ch_T0001864;gene_name=ENSG00000304207;ID=NA12877_ch_T0001864;Name=ENSG00000304207
NA12877_chrY	CAT	exon	26217435	26217624	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001864;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001864;transcript_name=NA12877_ch_T0001864;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001864:0;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26217625	26223851	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001864;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001864;transcript_name=NA12877_ch_T0001864;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001864:0;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26223852	26223936	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001864;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001864;transcript_name=NA12877_ch_T0001864;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001864:1;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26223937	26225029	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001864;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001864;transcript_name=NA12877_ch_T0001864;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001864:1;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26225030	26225114	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001864;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001864;transcript_name=NA12877_ch_T0001864;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001864:2;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26225115	26227490	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001864;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001864;transcript_name=NA12877_ch_T0001864;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001864:2;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26227491	26227612	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001864;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001864;transcript_name=NA12877_ch_T0001864;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001864:3;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26227613	26231569	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001864;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001864;transcript_name=NA12877_ch_T0001864;gene_name=ENSG00000304207;ID=intron:NA12877_ch_T0001864:3;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26231570	26231877	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=NA12877_ch_T0001864;gene_id=NA12877_ch_G0000680;Parent=NA12877_ch_T0001864;transcript_name=NA12877_ch_T0001864;gene_name=ENSG00000304207;ID=exon:NA12877_ch_T0001864:4;Name=ENSG00000304207;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26263952	26265863	.	-	.	source_gene_common_name=CDY19P;source_gene=ENSG00000237823.1;alternative_source_transcripts=ENST00000411668.1,ENST00000411668.1;gene_id=NA12877_ch_G0000681;gene_biotype=unprocessed_pseudogene;gene_name=CDY19P;gene_sources=liftoff;ID=NA12877_ch_G0000681;Name=CDY19P
NA12877_chrY	CAT	transcript	26263952	26265863	1000	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;alternative_source_transcripts=ENST00000411668.1,ENST00000411668.1;transcript_id=NA12877_ch_T0001865;gene_id=NA12877_ch_G0000681;Parent=NA12877_ch_G0000681;transcript_name=NA12877_ch_T0001865;gene_name=CDY19P;ID=NA12877_ch_T0001865;Name=CDY19P
NA12877_chrY	CAT	exon	26263952	26265393	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;alternative_source_transcripts=ENST00000411668.1,ENST00000411668.1;transcript_id=NA12877_ch_T0001865;gene_id=NA12877_ch_G0000681;Parent=NA12877_ch_T0001865;transcript_name=NA12877_ch_T0001865;gene_name=CDY19P;ID=exon:NA12877_ch_T0001865:0;Name=CDY19P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26265394	26265692	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;alternative_source_transcripts=ENST00000411668.1,ENST00000411668.1;transcript_id=NA12877_ch_T0001865;gene_id=NA12877_ch_G0000681;Parent=NA12877_ch_T0001865;transcript_name=NA12877_ch_T0001865;gene_name=CDY19P;ID=intron:NA12877_ch_T0001865:0;Name=CDY19P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26265693	26265863	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;alternative_source_transcripts=ENST00000411668.1,ENST00000411668.1;transcript_id=NA12877_ch_T0001865;gene_id=NA12877_ch_G0000681;Parent=NA12877_ch_T0001865;transcript_name=NA12877_ch_T0001865;gene_name=CDY19P;ID=exon:NA12877_ch_T0001865:1;Name=CDY19P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26279620	26288274	.	+	.	source_gene_common_name=USP9YP36;source_gene=ENSG00000229709.1;alternative_source_transcripts=ENST00000424581.1,ENST00000424581.1;gene_id=NA12877_ch_G0000682;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP36;gene_sources=liftoff;ID=NA12877_ch_G0000682;Name=USP9YP36
NA12877_chrY	CAT	transcript	26279620	26288274	1000	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1,ENST00000424581.1;transcript_id=NA12877_ch_T0001866;gene_id=NA12877_ch_G0000682;Parent=NA12877_ch_G0000682;transcript_name=NA12877_ch_T0001866;gene_name=USP9YP36;ID=NA12877_ch_T0001866;Name=USP9YP36
NA12877_chrY	CAT	exon	26279620	26279825	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1,ENST00000424581.1;transcript_id=NA12877_ch_T0001866;gene_id=NA12877_ch_G0000682;Parent=NA12877_ch_T0001866;transcript_name=NA12877_ch_T0001866;gene_name=USP9YP36;ID=exon:NA12877_ch_T0001866:0;Name=USP9YP36;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26279826	26281988	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1,ENST00000424581.1;transcript_id=NA12877_ch_T0001866;gene_id=NA12877_ch_G0000682;Parent=NA12877_ch_T0001866;transcript_name=NA12877_ch_T0001866;gene_name=USP9YP36;ID=intron:NA12877_ch_T0001866:0;Name=USP9YP36;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26281989	26282212	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1,ENST00000424581.1;transcript_id=NA12877_ch_T0001866;gene_id=NA12877_ch_G0000682;Parent=NA12877_ch_T0001866;transcript_name=NA12877_ch_T0001866;gene_name=USP9YP36;ID=exon:NA12877_ch_T0001866:1;Name=USP9YP36;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26282213	26284016	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1,ENST00000424581.1;transcript_id=NA12877_ch_T0001866;gene_id=NA12877_ch_G0000682;Parent=NA12877_ch_T0001866;transcript_name=NA12877_ch_T0001866;gene_name=USP9YP36;ID=intron:NA12877_ch_T0001866:1;Name=USP9YP36;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26284017	26284195	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1,ENST00000424581.1;transcript_id=NA12877_ch_T0001866;gene_id=NA12877_ch_G0000682;Parent=NA12877_ch_T0001866;transcript_name=NA12877_ch_T0001866;gene_name=USP9YP36;ID=exon:NA12877_ch_T0001866:2;Name=USP9YP36;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26284196	26286007	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1,ENST00000424581.1;transcript_id=NA12877_ch_T0001866;gene_id=NA12877_ch_G0000682;Parent=NA12877_ch_T0001866;transcript_name=NA12877_ch_T0001866;gene_name=USP9YP36;ID=intron:NA12877_ch_T0001866:2;Name=USP9YP36;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26286008	26286097	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1,ENST00000424581.1;transcript_id=NA12877_ch_T0001866;gene_id=NA12877_ch_G0000682;Parent=NA12877_ch_T0001866;transcript_name=NA12877_ch_T0001866;gene_name=USP9YP36;ID=exon:NA12877_ch_T0001866:3;Name=USP9YP36;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26286098	26288144	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1,ENST00000424581.1;transcript_id=NA12877_ch_T0001866;gene_id=NA12877_ch_G0000682;Parent=NA12877_ch_T0001866;transcript_name=NA12877_ch_T0001866;gene_name=USP9YP36;ID=intron:NA12877_ch_T0001866:3;Name=USP9YP36;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26288145	26288274	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;alternative_source_transcripts=ENST00000424581.1,ENST00000424581.1;transcript_id=NA12877_ch_T0001866;gene_id=NA12877_ch_G0000682;Parent=NA12877_ch_T0001866;transcript_name=NA12877_ch_T0001866;gene_name=USP9YP36;ID=exon:NA12877_ch_T0001866:4;Name=USP9YP36;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26290153	26292175	.	-	.	source_gene_common_name=USP9YP33;source_gene=ENSG00000232064.1;alternative_source_transcripts=ENST00000412220.1,ENST00000412220.1;gene_id=NA12877_ch_G0000683;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP33;gene_sources=liftoff;ID=NA12877_ch_G0000683;Name=USP9YP33
NA12877_chrY	CAT	transcript	26290153	26292175	1000	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;alternative_source_transcripts=ENST00000412220.1,ENST00000412220.1;transcript_id=NA12877_ch_T0001867;gene_id=NA12877_ch_G0000683;Parent=NA12877_ch_G0000683;transcript_name=NA12877_ch_T0001867;gene_name=USP9YP33;ID=NA12877_ch_T0001867;Name=USP9YP33
NA12877_chrY	CAT	exon	26290153	26290343	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;alternative_source_transcripts=ENST00000412220.1,ENST00000412220.1;transcript_id=NA12877_ch_T0001867;gene_id=NA12877_ch_G0000683;Parent=NA12877_ch_T0001867;transcript_name=NA12877_ch_T0001867;gene_name=USP9YP33;ID=exon:NA12877_ch_T0001867:0;Name=USP9YP33;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26290344	26291945	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;alternative_source_transcripts=ENST00000412220.1,ENST00000412220.1;transcript_id=NA12877_ch_T0001867;gene_id=NA12877_ch_G0000683;Parent=NA12877_ch_T0001867;transcript_name=NA12877_ch_T0001867;gene_name=USP9YP33;ID=intron:NA12877_ch_T0001867:0;Name=USP9YP33;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26291946	26292175	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;alternative_source_transcripts=ENST00000412220.1,ENST00000412220.1;transcript_id=NA12877_ch_T0001867;gene_id=NA12877_ch_G0000683;Parent=NA12877_ch_T0001867;transcript_name=NA12877_ch_T0001867;gene_name=USP9YP33;ID=exon:NA12877_ch_T0001867:1;Name=USP9YP33;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26318470	26320079	.	+	.	source_gene_common_name=CDY20P;source_gene=ENSG00000225609.1;alternative_source_transcripts=ENST00000447528.1,ENST00000447528.1;gene_id=NA12877_ch_G0000684;gene_biotype=unprocessed_pseudogene;gene_name=CDY20P;gene_sources=liftoff;ID=NA12877_ch_G0000684;Name=CDY20P
NA12877_chrY	CAT	transcript	26318470	26320079	1000	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;alternative_source_transcripts=ENST00000447528.1,ENST00000447528.1;transcript_id=NA12877_ch_T0001868;gene_id=NA12877_ch_G0000684;Parent=NA12877_ch_G0000684;transcript_name=NA12877_ch_T0001868;gene_name=CDY20P;ID=NA12877_ch_T0001868;Name=CDY20P
NA12877_chrY	CAT	exon	26318470	26318535	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;alternative_source_transcripts=ENST00000447528.1,ENST00000447528.1;transcript_id=NA12877_ch_T0001868;gene_id=NA12877_ch_G0000684;Parent=NA12877_ch_T0001868;transcript_name=NA12877_ch_T0001868;gene_name=CDY20P;ID=exon:NA12877_ch_T0001868:0;Name=CDY20P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26318536	26318866	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;alternative_source_transcripts=ENST00000447528.1,ENST00000447528.1;transcript_id=NA12877_ch_T0001868;gene_id=NA12877_ch_G0000684;Parent=NA12877_ch_T0001868;transcript_name=NA12877_ch_T0001868;gene_name=CDY20P;ID=intron:NA12877_ch_T0001868:0;Name=CDY20P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26318867	26320079	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;alternative_source_transcripts=ENST00000447528.1,ENST00000447528.1;transcript_id=NA12877_ch_T0001868;gene_id=NA12877_ch_G0000684;Parent=NA12877_ch_T0001868;transcript_name=NA12877_ch_T0001868;gene_name=CDY20P;ID=exon:NA12877_ch_T0001868:1;Name=CDY20P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26321943	26324728	.	+	.	source_gene_common_name=CDY1;source_gene=ENSG00000172288.8;alternative_source_transcripts=ENST00000306609.5,ENST00000306609.5;gene_id=NA12877_ch_G0000685;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=liftoff;ID=NA12877_ch_G0000685;Name=CDY1
NA12877_chrY	CAT	transcript	26321943	26324728	100	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5,ENST00000306609.5;transcript_id=NA12877_ch_T0001869;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_G0000685;transcript_name=NA12877_ch_T0001869;gene_name=CDY1;ID=NA12877_ch_T0001869;Name=CDY1
NA12877_chrY	CAT	exon	26321943	26323860	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5,ENST00000306609.5;transcript_id=NA12877_ch_T0001869;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_T0001869;transcript_name=NA12877_ch_T0001869;gene_name=CDY1;ID=exon:NA12877_ch_T0001869:0;Name=CDY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	26322269	26323860	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5,ENST00000306609.5;transcript_id=NA12877_ch_T0001869;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_T0001869;transcript_name=NA12877_ch_T0001869;gene_name=CDY1;ID=CDS:NA12877_ch_T0001869:0;Name=CDY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	26322269	26322271	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5,ENST00000306609.5;transcript_id=NA12877_ch_T0001869;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_T0001869;transcript_name=NA12877_ch_T0001869;gene_name=CDY1;ID=start_codon:NA12877_ch_T0001869;Name=CDY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26323861	26324280	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5,ENST00000306609.5;transcript_id=NA12877_ch_T0001869;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_T0001869;transcript_name=NA12877_ch_T0001869;gene_name=CDY1;ID=intron:NA12877_ch_T0001869:0;Name=CDY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26324281	26324728	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5,ENST00000306609.5;transcript_id=NA12877_ch_T0001869;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_T0001869;transcript_name=NA12877_ch_T0001869;gene_name=CDY1;ID=exon:NA12877_ch_T0001869:1;Name=CDY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	26324281	26324353	.	+	1	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5,ENST00000306609.5;transcript_id=NA12877_ch_T0001869;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_T0001869;transcript_name=NA12877_ch_T0001869;gene_name=CDY1;ID=CDS:NA12877_ch_T0001869:1;Name=CDY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	26324351	26324353	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000306609.5,ENST00000306609.5;transcript_id=NA12877_ch_T0001869;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_T0001869;transcript_name=NA12877_ch_T0001869;gene_name=CDY1;ID=stop_codon:NA12877_ch_T0001869;Name=CDY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26321988	26324164	100	+	.	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000361963.3,ENST00000361963.3;transcript_id=NA12877_ch_T0001870;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_G0000685;transcript_name=NA12877_ch_T0001870;gene_name=CDY1;ID=NA12877_ch_T0001870;Name=CDY1
NA12877_chrY	CAT	exon	26321988	26324164	.	+	.	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000361963.3,ENST00000361963.3;transcript_id=NA12877_ch_T0001870;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_T0001870;transcript_name=NA12877_ch_T0001870;gene_name=CDY1;ID=exon:NA12877_ch_T0001870:0;Name=CDY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	26322269	26323891	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000361963.3,ENST00000361963.3;transcript_id=NA12877_ch_T0001870;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_T0001870;transcript_name=NA12877_ch_T0001870;gene_name=CDY1;ID=CDS:NA12877_ch_T0001870:0;Name=CDY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	26322269	26322271	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000361963.3,ENST00000361963.3;transcript_id=NA12877_ch_T0001870;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_T0001870;transcript_name=NA12877_ch_T0001870;gene_name=CDY1;ID=start_codon:NA12877_ch_T0001870;Name=CDY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	26323889	26323891	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=ENST00000361963.3,ENST00000361963.3;transcript_id=NA12877_ch_T0001870;gene_id=NA12877_ch_G0000685;Parent=NA12877_ch_T0001870;transcript_name=NA12877_ch_T0001870;gene_name=CDY1;ID=stop_codon:NA12877_ch_T0001870;Name=CDY1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26362729	26363055	.	+	.	source_gene_common_name=ELOCP34;source_gene=ENSG00000270535.1;alternative_source_transcripts=ENST00000604436.1,ENST00000604436.1;gene_id=NA12877_ch_G0000686;gene_biotype=processed_pseudogene;gene_name=ELOCP34;gene_sources=liftoff;ID=NA12877_ch_G0000686;Name=ELOCP34
NA12877_chrY	CAT	transcript	26362729	26363055	1000	+	.	source_transcript=ENST00000604436.1;source_transcript_name=ELOCP34-201;source_gene=ENSG00000270535.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270535.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604436.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP34;alternative_source_transcripts=ENST00000604436.1,ENST00000604436.1;transcript_id=NA12877_ch_T0001871;gene_id=NA12877_ch_G0000686;Parent=NA12877_ch_G0000686;transcript_name=NA12877_ch_T0001871;gene_name=ELOCP34;ID=NA12877_ch_T0001871;Name=ELOCP34
NA12877_chrY	CAT	exon	26362729	26363055	.	+	.	source_transcript=ENST00000604436.1;source_transcript_name=ELOCP34-201;source_gene=ENSG00000270535.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270535.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604436.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP34;alternative_source_transcripts=ENST00000604436.1,ENST00000604436.1;transcript_id=NA12877_ch_T0001871;gene_id=NA12877_ch_G0000686;Parent=NA12877_ch_T0001871;transcript_name=NA12877_ch_T0001871;gene_name=ELOCP34;ID=exon:NA12877_ch_T0001871:0;Name=ELOCP34;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26374885	26397171	.	-	.	source_gene_common_name=OFD1P13Y;source_gene=ENSG00000225287.1;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;gene_id=NA12877_ch_G0000687;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P13Y;gene_sources=liftoff;ID=NA12877_ch_G0000687;Name=OFD1P13Y
NA12877_chrY	CAT	transcript	26374885	26397171	1000	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_G0000687;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=NA12877_ch_T0001872;Name=OFD1P13Y
NA12877_chrY	CAT	exon	26374885	26375033	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=exon:NA12877_ch_T0001872:0;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26375034	26376647	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=intron:NA12877_ch_T0001872:0;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26376648	26376739	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=exon:NA12877_ch_T0001872:1;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26376740	26377844	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=intron:NA12877_ch_T0001872:1;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26377845	26377918	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=exon:NA12877_ch_T0001872:2;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26377919	26379694	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=intron:NA12877_ch_T0001872:2;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26379695	26379811	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=exon:NA12877_ch_T0001872:3;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26379812	26381917	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=intron:NA12877_ch_T0001872:3;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26381918	26382023	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=exon:NA12877_ch_T0001872:4;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26382024	26385068	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=intron:NA12877_ch_T0001872:4;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26385069	26385204	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=exon:NA12877_ch_T0001872:5;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26385205	26385543	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=intron:NA12877_ch_T0001872:5;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26385544	26385676	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=exon:NA12877_ch_T0001872:6;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26385677	26393153	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=intron:NA12877_ch_T0001872:6;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26393154	26393212	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=exon:NA12877_ch_T0001872:7;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26393213	26393297	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=intron:NA12877_ch_T0001872:7;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26393298	26393366	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=exon:NA12877_ch_T0001872:8;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26393367	26395574	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=intron:NA12877_ch_T0001872:8;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26395575	26395773	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=exon:NA12877_ch_T0001872:9;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26395774	26397073	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=intron:NA12877_ch_T0001872:9;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26397074	26397171	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;alternative_source_transcripts=ENST00000431179.1,ENST00000431179.1;transcript_id=NA12877_ch_T0001872;gene_id=NA12877_ch_G0000687;Parent=NA12877_ch_T0001872;transcript_name=NA12877_ch_T0001872;gene_name=OFD1P13Y;ID=exon:NA12877_ch_T0001872:10;Name=OFD1P13Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26399276	26402387	.	+	.	source_gene_common_name=TRAPPC2P5;source_gene=ENSG00000225256.1;alternative_source_transcripts=ENST00000426293.1,ENST00000426293.1;gene_id=NA12877_ch_G0000688;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P5;gene_sources=liftoff;ID=NA12877_ch_G0000688;Name=TRAPPC2P5
NA12877_chrY	CAT	transcript	26399276	26402387	1000	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;alternative_source_transcripts=ENST00000426293.1,ENST00000426293.1;transcript_id=NA12877_ch_T0001873;gene_id=NA12877_ch_G0000688;Parent=NA12877_ch_G0000688;transcript_name=NA12877_ch_T0001873;gene_name=TRAPPC2P5;ID=NA12877_ch_T0001873;Name=TRAPPC2P5
NA12877_chrY	CAT	exon	26399276	26399368	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;alternative_source_transcripts=ENST00000426293.1,ENST00000426293.1;transcript_id=NA12877_ch_T0001873;gene_id=NA12877_ch_G0000688;Parent=NA12877_ch_T0001873;transcript_name=NA12877_ch_T0001873;gene_name=TRAPPC2P5;ID=exon:NA12877_ch_T0001873:0;Name=TRAPPC2P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26399369	26401731	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;alternative_source_transcripts=ENST00000426293.1,ENST00000426293.1;transcript_id=NA12877_ch_T0001873;gene_id=NA12877_ch_G0000688;Parent=NA12877_ch_T0001873;transcript_name=NA12877_ch_T0001873;gene_name=TRAPPC2P5;ID=intron:NA12877_ch_T0001873:0;Name=TRAPPC2P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26401732	26401866	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;alternative_source_transcripts=ENST00000426293.1,ENST00000426293.1;transcript_id=NA12877_ch_T0001873;gene_id=NA12877_ch_G0000688;Parent=NA12877_ch_T0001873;transcript_name=NA12877_ch_T0001873;gene_name=TRAPPC2P5;ID=exon:NA12877_ch_T0001873:1;Name=TRAPPC2P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26401867	26402307	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;alternative_source_transcripts=ENST00000426293.1,ENST00000426293.1;transcript_id=NA12877_ch_T0001873;gene_id=NA12877_ch_G0000688;Parent=NA12877_ch_T0001873;transcript_name=NA12877_ch_T0001873;gene_name=TRAPPC2P5;ID=intron:NA12877_ch_T0001873:1;Name=TRAPPC2P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26402308	26402387	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;alternative_source_transcripts=ENST00000426293.1,ENST00000426293.1;transcript_id=NA12877_ch_T0001873;gene_id=NA12877_ch_G0000688;Parent=NA12877_ch_T0001873;transcript_name=NA12877_ch_T0001873;gene_name=TRAPPC2P5;ID=exon:NA12877_ch_T0001873:2;Name=TRAPPC2P5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26409733	26413382	.	-	.	source_gene_common_name=RAB9AP2;source_gene=ENSG00000223856.1;alternative_source_transcripts=ENST00000443911.1,ENST00000443911.1;gene_id=NA12877_ch_G0000689;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP2;gene_sources=liftoff;ID=NA12877_ch_G0000689;Name=RAB9AP2
NA12877_chrY	CAT	transcript	26409733	26413382	1000	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;alternative_source_transcripts=ENST00000443911.1,ENST00000443911.1;transcript_id=NA12877_ch_T0001874;gene_id=NA12877_ch_G0000689;Parent=NA12877_ch_G0000689;transcript_name=NA12877_ch_T0001874;gene_name=RAB9AP2;ID=NA12877_ch_T0001874;Name=RAB9AP2
NA12877_chrY	CAT	exon	26409733	26410095	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;alternative_source_transcripts=ENST00000443911.1,ENST00000443911.1;transcript_id=NA12877_ch_T0001874;gene_id=NA12877_ch_G0000689;Parent=NA12877_ch_T0001874;transcript_name=NA12877_ch_T0001874;gene_name=RAB9AP2;ID=exon:NA12877_ch_T0001874:0;Name=RAB9AP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26410096	26413148	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;alternative_source_transcripts=ENST00000443911.1,ENST00000443911.1;transcript_id=NA12877_ch_T0001874;gene_id=NA12877_ch_G0000689;Parent=NA12877_ch_T0001874;transcript_name=NA12877_ch_T0001874;gene_name=RAB9AP2;ID=intron:NA12877_ch_T0001874:0;Name=RAB9AP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26413149	26413382	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;alternative_source_transcripts=ENST00000443911.1,ENST00000443911.1;transcript_id=NA12877_ch_T0001874;gene_id=NA12877_ch_G0000689;Parent=NA12877_ch_T0001874;transcript_name=NA12877_ch_T0001874;gene_name=RAB9AP2;ID=exon:NA12877_ch_T0001874:1;Name=RAB9AP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26422847	26424017	.	+	.	source_gene_common_name=USP9YP30;source_gene=ENSG00000235004.1;alternative_source_transcripts=ENST00000430729.1,ENST00000430729.1;gene_id=NA12877_ch_G0000690;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP30;gene_sources=liftoff;ID=NA12877_ch_G0000690;Name=USP9YP30
NA12877_chrY	CAT	transcript	26422847	26424017	1000	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=299.78;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1,ENST00000430729.1;transcript_id=NA12877_ch_T0001875;gene_id=NA12877_ch_G0000690;Parent=NA12877_ch_G0000690;transcript_name=NA12877_ch_T0001875;gene_name=USP9YP30;ID=NA12877_ch_T0001875;Name=USP9YP30
NA12877_chrY	CAT	exon	26422847	26423012	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=299.78;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1,ENST00000430729.1;transcript_id=NA12877_ch_T0001875;gene_id=NA12877_ch_G0000690;Parent=NA12877_ch_T0001875;transcript_name=NA12877_ch_T0001875;gene_name=USP9YP30;ID=exon:NA12877_ch_T0001875:0;Name=USP9YP30;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26423013	26423347	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=299.78;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1,ENST00000430729.1;transcript_id=NA12877_ch_T0001875;gene_id=NA12877_ch_G0000690;Parent=NA12877_ch_T0001875;transcript_name=NA12877_ch_T0001875;gene_name=USP9YP30;ID=intron:NA12877_ch_T0001875:0;Name=USP9YP30;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26423348	26423541	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=299.78;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1,ENST00000430729.1;transcript_id=NA12877_ch_T0001875;gene_id=NA12877_ch_G0000690;Parent=NA12877_ch_T0001875;transcript_name=NA12877_ch_T0001875;gene_name=USP9YP30;ID=exon:NA12877_ch_T0001875:1;Name=USP9YP30;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26423542	26423922	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=299.78;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1,ENST00000430729.1;transcript_id=NA12877_ch_T0001875;gene_id=NA12877_ch_G0000690;Parent=NA12877_ch_T0001875;transcript_name=NA12877_ch_T0001875;gene_name=USP9YP30;ID=intron:NA12877_ch_T0001875:1;Name=USP9YP30;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26423923	26424017	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=299.78;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1,ENST00000430729.1;transcript_id=NA12877_ch_T0001875;gene_id=NA12877_ch_G0000690;Parent=NA12877_ch_T0001875;transcript_name=NA12877_ch_T0001875;gene_name=USP9YP30;ID=exon:NA12877_ch_T0001875:2;Name=USP9YP30;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26423173	26423326	.	+	.	source_gene_common_name=RNU1-107P;source_gene=ENSG00000252426.1;alternative_source_transcripts=ENST00000516617.1,ENST00000516617.1;gene_id=NA12877_ch_G0000691;gene_biotype=snRNA;gene_name=RNU1-107P;gene_sources=liftoff;ID=NA12877_ch_G0000691;Name=RNU1-107P
NA12877_chrY	CAT	transcript	26423173	26423326	1000	+	.	source_transcript=ENST00000516617.1;source_transcript_name=RNU1-107P-201;source_gene=ENSG00000252426.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252426.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516617.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-107P;alternative_source_transcripts=ENST00000516617.1,ENST00000516617.1;transcript_id=NA12877_ch_T0001876;gene_id=NA12877_ch_G0000691;Parent=NA12877_ch_G0000691;transcript_name=NA12877_ch_T0001876;gene_name=RNU1-107P;ID=NA12877_ch_T0001876;Name=RNU1-107P
NA12877_chrY	CAT	exon	26423173	26423326	.	+	.	source_transcript=ENST00000516617.1;source_transcript_name=RNU1-107P-201;source_gene=ENSG00000252426.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252426.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516617.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-107P;alternative_source_transcripts=ENST00000516617.1,ENST00000516617.1;transcript_id=NA12877_ch_T0001876;gene_id=NA12877_ch_G0000691;Parent=NA12877_ch_T0001876;transcript_name=NA12877_ch_T0001876;gene_name=RNU1-107P;ID=exon:NA12877_ch_T0001876:0;Name=RNU1-107P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26428321	26433219	.	+	.	source_gene_common_name=TTTY3;source_gene=ENSG00000231141.1;alternative_source_transcripts=ENST00000417334.1,ENST00000417334.1;gene_id=NA12877_ch_G0000692;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=NA12877_ch_G0000692;Name=TTTY3
NA12877_chrY	CAT	transcript	26428321	26433219	1000	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000417334.1,ENST00000417334.1;transcript_id=NA12877_ch_T0001877;gene_id=NA12877_ch_G0000692;Parent=NA12877_ch_G0000692;transcript_name=NA12877_ch_T0001877;gene_name=TTTY3;ID=NA12877_ch_T0001877;Name=TTTY3
NA12877_chrY	CAT	exon	26428321	26428424	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000417334.1,ENST00000417334.1;transcript_id=NA12877_ch_T0001877;gene_id=NA12877_ch_G0000692;Parent=NA12877_ch_T0001877;transcript_name=NA12877_ch_T0001877;gene_name=TTTY3;ID=exon:NA12877_ch_T0001877:0;Name=TTTY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26428425	26430622	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000417334.1,ENST00000417334.1;transcript_id=NA12877_ch_T0001877;gene_id=NA12877_ch_G0000692;Parent=NA12877_ch_T0001877;transcript_name=NA12877_ch_T0001877;gene_name=TTTY3;ID=intron:NA12877_ch_T0001877:0;Name=TTTY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26430623	26430757	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000417334.1,ENST00000417334.1;transcript_id=NA12877_ch_T0001877;gene_id=NA12877_ch_G0000692;Parent=NA12877_ch_T0001877;transcript_name=NA12877_ch_T0001877;gene_name=TTTY3;ID=exon:NA12877_ch_T0001877:1;Name=TTTY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26430758	26433114	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000417334.1,ENST00000417334.1;transcript_id=NA12877_ch_T0001877;gene_id=NA12877_ch_G0000692;Parent=NA12877_ch_T0001877;transcript_name=NA12877_ch_T0001877;gene_name=TTTY3;ID=intron:NA12877_ch_T0001877:1;Name=TTTY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26433115	26433219	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000417334.1,ENST00000417334.1;transcript_id=NA12877_ch_T0001877;gene_id=NA12877_ch_G0000692;Parent=NA12877_ch_T0001877;transcript_name=NA12877_ch_T0001877;gene_name=TTTY3;ID=exon:NA12877_ch_T0001877:2;Name=TTTY3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26429842	26434991	.	-	.	source_gene_common_name=USP9YP9;source_gene=ENSG00000232614.1;alternative_source_transcripts=ENST00000429406.1,ENST00000429406.1;gene_id=NA12877_ch_G0000693;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP9;gene_sources=liftoff;ID=NA12877_ch_G0000693;Name=USP9YP9
NA12877_chrY	CAT	transcript	26429842	26434991	1000	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1,ENST00000429406.1;transcript_id=NA12877_ch_T0001878;gene_id=NA12877_ch_G0000693;Parent=NA12877_ch_G0000693;transcript_name=NA12877_ch_T0001878;gene_name=USP9YP9;ID=NA12877_ch_T0001878;Name=USP9YP9
NA12877_chrY	CAT	exon	26429842	26430034	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1,ENST00000429406.1;transcript_id=NA12877_ch_T0001878;gene_id=NA12877_ch_G0000693;Parent=NA12877_ch_T0001878;transcript_name=NA12877_ch_T0001878;gene_name=USP9YP9;ID=exon:NA12877_ch_T0001878:0;Name=USP9YP9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26430035	26431670	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1,ENST00000429406.1;transcript_id=NA12877_ch_T0001878;gene_id=NA12877_ch_G0000693;Parent=NA12877_ch_T0001878;transcript_name=NA12877_ch_T0001878;gene_name=USP9YP9;ID=intron:NA12877_ch_T0001878:0;Name=USP9YP9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26431671	26431933	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1,ENST00000429406.1;transcript_id=NA12877_ch_T0001878;gene_id=NA12877_ch_G0000693;Parent=NA12877_ch_T0001878;transcript_name=NA12877_ch_T0001878;gene_name=USP9YP9;ID=exon:NA12877_ch_T0001878:1;Name=USP9YP9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26431934	26433057	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1,ENST00000429406.1;transcript_id=NA12877_ch_T0001878;gene_id=NA12877_ch_G0000693;Parent=NA12877_ch_T0001878;transcript_name=NA12877_ch_T0001878;gene_name=USP9YP9;ID=intron:NA12877_ch_T0001878:1;Name=USP9YP9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26433058	26433279	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1,ENST00000429406.1;transcript_id=NA12877_ch_T0001878;gene_id=NA12877_ch_G0000693;Parent=NA12877_ch_T0001878;transcript_name=NA12877_ch_T0001878;gene_name=USP9YP9;ID=exon:NA12877_ch_T0001878:2;Name=USP9YP9;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26433280	26434954	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1,ENST00000429406.1;transcript_id=NA12877_ch_T0001878;gene_id=NA12877_ch_G0000693;Parent=NA12877_ch_T0001878;transcript_name=NA12877_ch_T0001878;gene_name=USP9YP9;ID=intron:NA12877_ch_T0001878:2;Name=USP9YP9;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26434955	26434991	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;alternative_source_transcripts=ENST00000429406.1,ENST00000429406.1;transcript_id=NA12877_ch_T0001878;gene_id=NA12877_ch_G0000693;Parent=NA12877_ch_T0001878;transcript_name=NA12877_ch_T0001878;gene_name=USP9YP9;ID=exon:NA12877_ch_T0001878:3;Name=USP9YP9;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26448427	26450038	.	-	.	source_gene_common_name=USP9YP19;source_gene=ENSG00000225326.1;alternative_source_transcripts=ENST00000412165.1,ENST00000412165.1;gene_id=NA12877_ch_G0000694;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP19;gene_sources=liftoff;ID=NA12877_ch_G0000694;Name=USP9YP19
NA12877_chrY	CAT	transcript	26448427	26450038	1000	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;alternative_source_transcripts=ENST00000412165.1,ENST00000412165.1;transcript_id=NA12877_ch_T0001879;gene_id=NA12877_ch_G0000694;Parent=NA12877_ch_G0000694;transcript_name=NA12877_ch_T0001879;gene_name=USP9YP19;ID=NA12877_ch_T0001879;Name=USP9YP19
NA12877_chrY	CAT	exon	26448427	26448693	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;alternative_source_transcripts=ENST00000412165.1,ENST00000412165.1;transcript_id=NA12877_ch_T0001879;gene_id=NA12877_ch_G0000694;Parent=NA12877_ch_T0001879;transcript_name=NA12877_ch_T0001879;gene_name=USP9YP19;ID=exon:NA12877_ch_T0001879:0;Name=USP9YP19;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26448694	26449820	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;alternative_source_transcripts=ENST00000412165.1,ENST00000412165.1;transcript_id=NA12877_ch_T0001879;gene_id=NA12877_ch_G0000694;Parent=NA12877_ch_T0001879;transcript_name=NA12877_ch_T0001879;gene_name=USP9YP19;ID=intron:NA12877_ch_T0001879:0;Name=USP9YP19;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26449821	26450038	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;alternative_source_transcripts=ENST00000412165.1,ENST00000412165.1;transcript_id=NA12877_ch_T0001879;gene_id=NA12877_ch_G0000694;Parent=NA12877_ch_T0001879;transcript_name=NA12877_ch_T0001879;gene_name=USP9YP19;ID=exon:NA12877_ch_T0001879:1;Name=USP9YP19;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26452220	26452702	.	+	.	source_gene_common_name=XKRYP5;source_gene=ENSG00000223406.1;alternative_source_transcripts=ENST00000449659.1,ENST00000449659.1;gene_id=NA12877_ch_G0000695;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP5;gene_sources=liftoff;ID=NA12877_ch_G0000695;Name=XKRYP5
NA12877_chrY	CAT	transcript	26452220	26452702	1000	+	.	source_transcript=ENST00000449659.1;source_transcript_name=XKRYP5-201;source_gene=ENSG00000223406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449659.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP5;alternative_source_transcripts=ENST00000449659.1,ENST00000449659.1;transcript_id=NA12877_ch_T0001880;gene_id=NA12877_ch_G0000695;Parent=NA12877_ch_G0000695;transcript_name=NA12877_ch_T0001880;gene_name=XKRYP5;ID=NA12877_ch_T0001880;Name=XKRYP5
NA12877_chrY	CAT	exon	26452220	26452702	.	+	.	source_transcript=ENST00000449659.1;source_transcript_name=XKRYP5-201;source_gene=ENSG00000223406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449659.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP5;alternative_source_transcripts=ENST00000449659.1,ENST00000449659.1;transcript_id=NA12877_ch_T0001880;gene_id=NA12877_ch_G0000695;Parent=NA12877_ch_T0001880;transcript_name=NA12877_ch_T0001880;gene_name=XKRYP5;ID=exon:NA12877_ch_T0001880:0;Name=XKRYP5;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26512845	26514398	.	+	.	source_gene_common_name=CDY22P;source_gene=ENSG00000229343.1;alternative_source_transcripts=ENST00000451423.1,ENST00000451423.1;gene_id=NA12877_ch_G0000696;gene_biotype=unprocessed_pseudogene;gene_name=CDY22P;gene_sources=liftoff;ID=NA12877_ch_G0000696;Name=CDY22P
NA12877_chrY	CAT	transcript	26512845	26514398	1000	+	.	source_transcript=ENST00000451423.1;source_transcript_name=CDY22P-201;source_gene=ENSG00000229343.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229343.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451423.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY22P;alternative_source_transcripts=ENST00000451423.1,ENST00000451423.1;transcript_id=NA12877_ch_T0001881;gene_id=NA12877_ch_G0000696;Parent=NA12877_ch_G0000696;transcript_name=NA12877_ch_T0001881;gene_name=CDY22P;ID=NA12877_ch_T0001881;Name=CDY22P
NA12877_chrY	CAT	exon	26512845	26514398	.	+	.	source_transcript=ENST00000451423.1;source_transcript_name=CDY22P-201;source_gene=ENSG00000229343.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229343.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451423.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY22P;alternative_source_transcripts=ENST00000451423.1,ENST00000451423.1;transcript_id=NA12877_ch_T0001881;gene_id=NA12877_ch_G0000696;Parent=NA12877_ch_T0001881;transcript_name=NA12877_ch_T0001881;gene_name=CDY22P;ID=exon:NA12877_ch_T0001881:0;Name=CDY22P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26560776	26561101	.	+	.	source_gene_common_name=ELOCP17;source_gene=ENSG00000232695.1;alternative_source_transcripts=ENST00000414751.1,ENST00000414751.1;gene_id=NA12877_ch_G0000697;gene_biotype=processed_pseudogene;gene_name=ELOCP17;gene_sources=liftoff;ID=NA12877_ch_G0000697;Name=ELOCP17
NA12877_chrY	CAT	transcript	26560776	26561101	1000	+	.	source_transcript=ENST00000414751.1;source_transcript_name=ELOCP17-201;source_gene=ENSG00000232695.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232695.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414751.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP17;alternative_source_transcripts=ENST00000414751.1,ENST00000414751.1;transcript_id=NA12877_ch_T0001882;gene_id=NA12877_ch_G0000697;Parent=NA12877_ch_G0000697;transcript_name=NA12877_ch_T0001882;gene_name=ELOCP17;ID=NA12877_ch_T0001882;Name=ELOCP17
NA12877_chrY	CAT	exon	26560776	26561101	.	+	.	source_transcript=ENST00000414751.1;source_transcript_name=ELOCP17-201;source_gene=ENSG00000232695.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232695.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414751.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP17;alternative_source_transcripts=ENST00000414751.1,ENST00000414751.1;transcript_id=NA12877_ch_T0001882;gene_id=NA12877_ch_G0000697;Parent=NA12877_ch_T0001882;transcript_name=NA12877_ch_T0001882;gene_name=ELOCP17;ID=exon:NA12877_ch_T0001882:0;Name=ELOCP17;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26571768	26598490	.	-	.	source_gene_common_name=OFD1P18Y;source_gene=ENSG00000235511.1;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;gene_id=NA12877_ch_G0000698;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P18Y;gene_sources=liftoff;ID=NA12877_ch_G0000698;Name=OFD1P18Y
NA12877_chrY	CAT	transcript	26571768	26598490	1000	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_G0000698;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=NA12877_ch_T0001883;Name=OFD1P18Y
NA12877_chrY	CAT	exon	26571768	26571839	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=exon:NA12877_ch_T0001883:0;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26571840	26572941	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=intron:NA12877_ch_T0001883:0;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26572942	26573015	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=exon:NA12877_ch_T0001883:1;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26573016	26574801	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=intron:NA12877_ch_T0001883:1;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26574802	26574920	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=exon:NA12877_ch_T0001883:2;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26574921	26577567	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=intron:NA12877_ch_T0001883:2;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26577568	26577673	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=exon:NA12877_ch_T0001883:3;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26577674	26580719	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=intron:NA12877_ch_T0001883:3;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26580720	26580867	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=exon:NA12877_ch_T0001883:4;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26580868	26581211	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=intron:NA12877_ch_T0001883:4;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26581212	26581346	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=exon:NA12877_ch_T0001883:5;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26581347	26596967	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=intron:NA12877_ch_T0001883:5;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26596968	26597173	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=exon:NA12877_ch_T0001883:6;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26597174	26598391	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=intron:NA12877_ch_T0001883:6;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26598392	26598490	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;alternative_source_transcripts=ENST00000420889.1,ENST00000420889.1;transcript_id=NA12877_ch_T0001883;gene_id=NA12877_ch_G0000698;Parent=NA12877_ch_T0001883;transcript_name=NA12877_ch_T0001883;gene_name=OFD1P18Y;ID=exon:NA12877_ch_T0001883:7;Name=OFD1P18Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26604358	26607090	.	+	.	source_gene_common_name=TRAPPC2P4;source_gene=ENSG00000232914.1;alternative_source_transcripts=ENST00000421750.1,ENST00000421750.1;gene_id=NA12877_ch_G0000699;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P4;gene_sources=liftoff;ID=NA12877_ch_G0000699;Name=TRAPPC2P4
NA12877_chrY	CAT	transcript	26604358	26607090	1000	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;alternative_source_transcripts=ENST00000421750.1,ENST00000421750.1;transcript_id=NA12877_ch_T0001884;gene_id=NA12877_ch_G0000699;Parent=NA12877_ch_G0000699;transcript_name=NA12877_ch_T0001884;gene_name=TRAPPC2P4;ID=NA12877_ch_T0001884;Name=TRAPPC2P4
NA12877_chrY	CAT	exon	26604358	26604450	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;alternative_source_transcripts=ENST00000421750.1,ENST00000421750.1;transcript_id=NA12877_ch_T0001884;gene_id=NA12877_ch_G0000699;Parent=NA12877_ch_T0001884;transcript_name=NA12877_ch_T0001884;gene_name=TRAPPC2P4;ID=exon:NA12877_ch_T0001884:0;Name=TRAPPC2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26604451	26606404	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;alternative_source_transcripts=ENST00000421750.1,ENST00000421750.1;transcript_id=NA12877_ch_T0001884;gene_id=NA12877_ch_G0000699;Parent=NA12877_ch_T0001884;transcript_name=NA12877_ch_T0001884;gene_name=TRAPPC2P4;ID=intron:NA12877_ch_T0001884:0;Name=TRAPPC2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26606405	26606549	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;alternative_source_transcripts=ENST00000421750.1,ENST00000421750.1;transcript_id=NA12877_ch_T0001884;gene_id=NA12877_ch_G0000699;Parent=NA12877_ch_T0001884;transcript_name=NA12877_ch_T0001884;gene_name=TRAPPC2P4;ID=exon:NA12877_ch_T0001884:1;Name=TRAPPC2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26606550	26606997	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;alternative_source_transcripts=ENST00000421750.1,ENST00000421750.1;transcript_id=NA12877_ch_T0001884;gene_id=NA12877_ch_G0000699;Parent=NA12877_ch_T0001884;transcript_name=NA12877_ch_T0001884;gene_name=TRAPPC2P4;ID=intron:NA12877_ch_T0001884:1;Name=TRAPPC2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26606998	26607090	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;alternative_source_transcripts=ENST00000421750.1,ENST00000421750.1;transcript_id=NA12877_ch_T0001884;gene_id=NA12877_ch_G0000699;Parent=NA12877_ch_T0001884;transcript_name=NA12877_ch_T0001884;gene_name=TRAPPC2P4;ID=exon:NA12877_ch_T0001884:2;Name=TRAPPC2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26618163	26618735	.	-	.	source_gene_common_name=RAB9AP3;source_gene=ENSG00000223655.1;alternative_source_transcripts=ENST00000412737.1,ENST00000412737.1;gene_id=NA12877_ch_G0000700;gene_biotype=processed_pseudogene;gene_name=RAB9AP3;gene_sources=liftoff;ID=NA12877_ch_G0000700;Name=RAB9AP3
NA12877_chrY	CAT	transcript	26618163	26618735	1000	-	.	source_transcript=ENST00000412737.1;source_transcript_name=RAB9AP3-201;source_gene=ENSG00000223655.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223655.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000412737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412737.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP3;alternative_source_transcripts=ENST00000412737.1,ENST00000412737.1;transcript_id=NA12877_ch_T0001885;gene_id=NA12877_ch_G0000700;Parent=NA12877_ch_G0000700;transcript_name=NA12877_ch_T0001885;gene_name=RAB9AP3;ID=NA12877_ch_T0001885;Name=RAB9AP3
NA12877_chrY	CAT	exon	26618163	26618735	.	-	.	source_transcript=ENST00000412737.1;source_transcript_name=RAB9AP3-201;source_gene=ENSG00000223655.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223655.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000412737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412737.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP3;alternative_source_transcripts=ENST00000412737.1,ENST00000412737.1;transcript_id=NA12877_ch_T0001885;gene_id=NA12877_ch_G0000700;Parent=NA12877_ch_T0001885;transcript_name=NA12877_ch_T0001885;gene_name=RAB9AP3;ID=exon:NA12877_ch_T0001885:0;Name=RAB9AP3;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26623228	26629666	.	+	.	source_gene_common_name=USP9YP20;source_gene=ENSG00000230854.1;gene_id=NA12877_ch_G0000701;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP20;gene_sources=liftoff;ID=NA12877_ch_G0000701;Name=USP9YP20
NA12877_chrY	CAT	transcript	26623228	26629666	1000	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=NA12877_ch_T0001886;gene_id=NA12877_ch_G0000701;Parent=NA12877_ch_G0000701;transcript_name=NA12877_ch_T0001886;gene_name=USP9YP20;ID=NA12877_ch_T0001886;Name=USP9YP20
NA12877_chrY	CAT	exon	26623228	26623359	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=NA12877_ch_T0001886;gene_id=NA12877_ch_G0000701;Parent=NA12877_ch_T0001886;transcript_name=NA12877_ch_T0001886;gene_name=USP9YP20;ID=exon:NA12877_ch_T0001886:0;Name=USP9YP20;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26623360	26628501	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=NA12877_ch_T0001886;gene_id=NA12877_ch_G0000701;Parent=NA12877_ch_T0001886;transcript_name=NA12877_ch_T0001886;gene_name=USP9YP20;ID=intron:NA12877_ch_T0001886:0;Name=USP9YP20;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26628502	26628639	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=NA12877_ch_T0001886;gene_id=NA12877_ch_G0000701;Parent=NA12877_ch_T0001886;transcript_name=NA12877_ch_T0001886;gene_name=USP9YP20;ID=exon:NA12877_ch_T0001886:1;Name=USP9YP20;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26628640	26628782	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=NA12877_ch_T0001886;gene_id=NA12877_ch_G0000701;Parent=NA12877_ch_T0001886;transcript_name=NA12877_ch_T0001886;gene_name=USP9YP20;ID=intron:NA12877_ch_T0001886:1;Name=USP9YP20;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26628783	26628819	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=NA12877_ch_T0001886;gene_id=NA12877_ch_G0000701;Parent=NA12877_ch_T0001886;transcript_name=NA12877_ch_T0001886;gene_name=USP9YP20;ID=exon:NA12877_ch_T0001886:2;Name=USP9YP20;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26628820	26629033	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=NA12877_ch_T0001886;gene_id=NA12877_ch_G0000701;Parent=NA12877_ch_T0001886;transcript_name=NA12877_ch_T0001886;gene_name=USP9YP20;ID=intron:NA12877_ch_T0001886:2;Name=USP9YP20;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26629034	26629191	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=NA12877_ch_T0001886;gene_id=NA12877_ch_G0000701;Parent=NA12877_ch_T0001886;transcript_name=NA12877_ch_T0001886;gene_name=USP9YP20;ID=exon:NA12877_ch_T0001886:3;Name=USP9YP20;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26629192	26629573	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=NA12877_ch_T0001886;gene_id=NA12877_ch_G0000701;Parent=NA12877_ch_T0001886;transcript_name=NA12877_ch_T0001886;gene_name=USP9YP20;ID=intron:NA12877_ch_T0001886:3;Name=USP9YP20;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26629574	26629666	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=NA12877_ch_T0001886;gene_id=NA12877_ch_G0000701;Parent=NA12877_ch_T0001886;transcript_name=NA12877_ch_T0001886;gene_name=USP9YP20;ID=exon:NA12877_ch_T0001886:4;Name=USP9YP20;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26628819	26628982	.	+	.	source_gene_common_name=RNU1-40P;source_gene=ENSG00000252625.1;gene_id=NA12877_ch_G0000702;gene_biotype=snRNA;gene_name=RNU1-40P;gene_sources=liftoff;ID=NA12877_ch_G0000702;Name=RNU1-40P
NA12877_chrY	CAT	transcript	26628819	26628982	1000	+	.	source_transcript=ENST00000516816.1;source_transcript_name=RNU1-40P-201;source_gene=ENSG00000252625.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252625.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-40P;transcript_id=NA12877_ch_T0001887;gene_id=NA12877_ch_G0000702;Parent=NA12877_ch_G0000702;transcript_name=NA12877_ch_T0001887;gene_name=RNU1-40P;ID=NA12877_ch_T0001887;Name=RNU1-40P
NA12877_chrY	CAT	exon	26628819	26628982	.	+	.	source_transcript=ENST00000516816.1;source_transcript_name=RNU1-40P-201;source_gene=ENSG00000252625.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252625.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-40P;transcript_id=NA12877_ch_T0001887;gene_id=NA12877_ch_G0000702;Parent=NA12877_ch_T0001887;transcript_name=NA12877_ch_T0001887;gene_name=RNU1-40P;ID=exon:NA12877_ch_T0001887:0;Name=RNU1-40P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26633677	26635725	.	-	.	source_gene_common_name=USP9YP21;source_gene=ENSG00000227635.1;alternative_source_transcripts=ENST00000420603.1,ENST00000420603.1;gene_id=NA12877_ch_G0000703;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP21;gene_sources=liftoff;ID=NA12877_ch_G0000703;Name=USP9YP21
NA12877_chrY	CAT	transcript	26633677	26635725	1000	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;alternative_source_transcripts=ENST00000420603.1,ENST00000420603.1;transcript_id=NA12877_ch_T0001888;gene_id=NA12877_ch_G0000703;Parent=NA12877_ch_G0000703;transcript_name=NA12877_ch_T0001888;gene_name=USP9YP21;ID=NA12877_ch_T0001888;Name=USP9YP21
NA12877_chrY	CAT	exon	26633677	26633859	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;alternative_source_transcripts=ENST00000420603.1,ENST00000420603.1;transcript_id=NA12877_ch_T0001888;gene_id=NA12877_ch_G0000703;Parent=NA12877_ch_T0001888;transcript_name=NA12877_ch_T0001888;gene_name=USP9YP21;ID=exon:NA12877_ch_T0001888:0;Name=USP9YP21;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26633860	26635476	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;alternative_source_transcripts=ENST00000420603.1,ENST00000420603.1;transcript_id=NA12877_ch_T0001888;gene_id=NA12877_ch_G0000703;Parent=NA12877_ch_T0001888;transcript_name=NA12877_ch_T0001888;gene_name=USP9YP21;ID=intron:NA12877_ch_T0001888:0;Name=USP9YP21;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26635477	26635725	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;alternative_source_transcripts=ENST00000420603.1,ENST00000420603.1;transcript_id=NA12877_ch_T0001888;gene_id=NA12877_ch_G0000703;Parent=NA12877_ch_T0001888;transcript_name=NA12877_ch_T0001888;gene_name=USP9YP21;ID=exon:NA12877_ch_T0001888:1;Name=USP9YP21;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26643112	26653996	.	+	.	source_gene_common_name=XKRYP6;source_gene=ENSG00000237546.1;alternative_source_transcripts=ENST00000440468.1,ENST00000440468.1;gene_id=NA12877_ch_G0000704;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP6;gene_sources=liftoff;ID=NA12877_ch_G0000704;Name=XKRYP6
NA12877_chrY	CAT	transcript	26643112	26653996	1000	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000440468.1,ENST00000440468.1;transcript_id=NA12877_ch_T0001889;gene_id=NA12877_ch_G0000704;Parent=NA12877_ch_G0000704;transcript_name=NA12877_ch_T0001889;gene_name=XKRYP6;ID=NA12877_ch_T0001889;Name=XKRYP6
NA12877_chrY	CAT	exon	26643112	26643447	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000440468.1,ENST00000440468.1;transcript_id=NA12877_ch_T0001889;gene_id=NA12877_ch_G0000704;Parent=NA12877_ch_T0001889;transcript_name=NA12877_ch_T0001889;gene_name=XKRYP6;ID=exon:NA12877_ch_T0001889:0;Name=XKRYP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26643448	26653216	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000440468.1,ENST00000440468.1;transcript_id=NA12877_ch_T0001889;gene_id=NA12877_ch_G0000704;Parent=NA12877_ch_T0001889;transcript_name=NA12877_ch_T0001889;gene_name=XKRYP6;ID=intron:NA12877_ch_T0001889:0;Name=XKRYP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26653217	26653996	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000440468.1,ENST00000440468.1;transcript_id=NA12877_ch_T0001889;gene_id=NA12877_ch_G0000704;Parent=NA12877_ch_T0001889;transcript_name=NA12877_ch_T0001889;gene_name=XKRYP6;ID=exon:NA12877_ch_T0001889:1;Name=XKRYP6;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26691085	26691416	.	-	.	source_gene_common_name=ELOCP11;source_gene=ENSG00000227867.1;alternative_source_transcripts=ENST00000436690.1,ENST00000436690.1;gene_id=NA12877_ch_G0000705;gene_biotype=processed_pseudogene;gene_name=ELOCP11;gene_sources=liftoff;ID=NA12877_ch_G0000705;Name=ELOCP11
NA12877_chrY	CAT	transcript	26691085	26691416	1000	-	.	source_transcript=ENST00000436690.1;source_transcript_name=ELOCP11-201;source_gene=ENSG00000227867.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227867.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436690.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP11;alternative_source_transcripts=ENST00000436690.1,ENST00000436690.1;transcript_id=NA12877_ch_T0001890;gene_id=NA12877_ch_G0000705;Parent=NA12877_ch_G0000705;transcript_name=NA12877_ch_T0001890;gene_name=ELOCP11;ID=NA12877_ch_T0001890;Name=ELOCP11
NA12877_chrY	CAT	exon	26691085	26691416	.	-	.	source_transcript=ENST00000436690.1;source_transcript_name=ELOCP11-201;source_gene=ENSG00000227867.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227867.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP11;alternative_source_transcripts=ENST00000436690.1,ENST00000436690.1;transcript_id=NA12877_ch_T0001890;gene_id=NA12877_ch_G0000705;Parent=NA12877_ch_T0001890;transcript_name=NA12877_ch_T0001890;gene_name=ELOCP11;ID=exon:NA12877_ch_T0001890:0;Name=ELOCP11;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26694528	26695541	.	-	.	source_gene_common_name=CDY23P;source_gene=ENSG00000231716.1;alternative_source_transcripts=ENST00000451661.1,ENST00000451661.1;gene_id=NA12877_ch_G0000706;gene_biotype=unprocessed_pseudogene;gene_name=CDY23P;gene_sources=liftoff;ID=NA12877_ch_G0000706;Name=CDY23P
NA12877_chrY	CAT	transcript	26694528	26695541	1000	-	.	source_transcript=ENST00000451661.1;source_transcript_name=CDY23P-201;source_gene=ENSG00000231716.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231716.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451661.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY23P;alternative_source_transcripts=ENST00000451661.1,ENST00000451661.1;transcript_id=NA12877_ch_T0001891;gene_id=NA12877_ch_G0000706;Parent=NA12877_ch_G0000706;transcript_name=NA12877_ch_T0001891;gene_name=CDY23P;ID=NA12877_ch_T0001891;Name=CDY23P
NA12877_chrY	CAT	exon	26694528	26695541	.	-	.	source_transcript=ENST00000451661.1;source_transcript_name=CDY23P-201;source_gene=ENSG00000231716.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231716.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451661.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY23P;alternative_source_transcripts=ENST00000451661.1,ENST00000451661.1;transcript_id=NA12877_ch_T0001891;gene_id=NA12877_ch_G0000706;Parent=NA12877_ch_T0001891;transcript_name=NA12877_ch_T0001891;gene_name=CDY23P;ID=exon:NA12877_ch_T0001891:0;Name=CDY23P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26702096	26708698	.	+	.	source_gene_common_name=USP9YP26;source_gene=ENSG00000234744.1;alternative_source_transcripts=ENST00000421008.1,ENST00000421008.1;gene_id=NA12877_ch_G0000707;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP26;gene_sources=liftoff;ID=NA12877_ch_G0000707;Name=USP9YP26
NA12877_chrY	CAT	transcript	26702096	26708698	1000	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1,ENST00000421008.1;transcript_id=NA12877_ch_T0001892;gene_id=NA12877_ch_G0000707;Parent=NA12877_ch_G0000707;transcript_name=NA12877_ch_T0001892;gene_name=USP9YP26;ID=NA12877_ch_T0001892;Name=USP9YP26
NA12877_chrY	CAT	exon	26702096	26702318	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1,ENST00000421008.1;transcript_id=NA12877_ch_T0001892;gene_id=NA12877_ch_G0000707;Parent=NA12877_ch_T0001892;transcript_name=NA12877_ch_T0001892;gene_name=USP9YP26;ID=exon:NA12877_ch_T0001892:0;Name=USP9YP26;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26702319	26704116	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1,ENST00000421008.1;transcript_id=NA12877_ch_T0001892;gene_id=NA12877_ch_G0000707;Parent=NA12877_ch_T0001892;transcript_name=NA12877_ch_T0001892;gene_name=USP9YP26;ID=intron:NA12877_ch_T0001892:0;Name=USP9YP26;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26704117	26704235	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1,ENST00000421008.1;transcript_id=NA12877_ch_T0001892;gene_id=NA12877_ch_G0000707;Parent=NA12877_ch_T0001892;transcript_name=NA12877_ch_T0001892;gene_name=USP9YP26;ID=exon:NA12877_ch_T0001892:1;Name=USP9YP26;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26704236	26706021	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1,ENST00000421008.1;transcript_id=NA12877_ch_T0001892;gene_id=NA12877_ch_G0000707;Parent=NA12877_ch_T0001892;transcript_name=NA12877_ch_T0001892;gene_name=USP9YP26;ID=intron:NA12877_ch_T0001892:1;Name=USP9YP26;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26706022	26706211	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1,ENST00000421008.1;transcript_id=NA12877_ch_T0001892;gene_id=NA12877_ch_G0000707;Parent=NA12877_ch_T0001892;transcript_name=NA12877_ch_T0001892;gene_name=USP9YP26;ID=exon:NA12877_ch_T0001892:2;Name=USP9YP26;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26706212	26708569	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1,ENST00000421008.1;transcript_id=NA12877_ch_T0001892;gene_id=NA12877_ch_G0000707;Parent=NA12877_ch_T0001892;transcript_name=NA12877_ch_T0001892;gene_name=USP9YP26;ID=intron:NA12877_ch_T0001892:2;Name=USP9YP26;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26708570	26708698	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;alternative_source_transcripts=ENST00000421008.1,ENST00000421008.1;transcript_id=NA12877_ch_T0001892;gene_id=NA12877_ch_G0000707;Parent=NA12877_ch_T0001892;transcript_name=NA12877_ch_T0001892;gene_name=USP9YP26;ID=exon:NA12877_ch_T0001892:3;Name=USP9YP26;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26711277	26712079	.	+	.	source_gene_common_name=HSFY8P;source_gene=ENSG00000233156.1;alternative_source_transcripts=ENST00000437934.1,ENST00000437934.1;gene_id=NA12877_ch_G0000708;gene_biotype=unprocessed_pseudogene;gene_name=HSFY8P;gene_sources=liftoff;ID=NA12877_ch_G0000708;Name=HSFY8P
NA12877_chrY	CAT	transcript	26711277	26712079	1000	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;alternative_source_transcripts=ENST00000437934.1,ENST00000437934.1;transcript_id=NA12877_ch_T0001893;gene_id=NA12877_ch_G0000708;Parent=NA12877_ch_G0000708;transcript_name=NA12877_ch_T0001893;gene_name=HSFY8P;ID=NA12877_ch_T0001893;Name=HSFY8P
NA12877_chrY	CAT	exon	26711277	26711435	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;alternative_source_transcripts=ENST00000437934.1,ENST00000437934.1;transcript_id=NA12877_ch_T0001893;gene_id=NA12877_ch_G0000708;Parent=NA12877_ch_T0001893;transcript_name=NA12877_ch_T0001893;gene_name=HSFY8P;ID=exon:NA12877_ch_T0001893:0;Name=HSFY8P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26711436	26711920	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;alternative_source_transcripts=ENST00000437934.1,ENST00000437934.1;transcript_id=NA12877_ch_T0001893;gene_id=NA12877_ch_G0000708;Parent=NA12877_ch_T0001893;transcript_name=NA12877_ch_T0001893;gene_name=HSFY8P;ID=intron:NA12877_ch_T0001893:0;Name=HSFY8P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26711921	26712079	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;alternative_source_transcripts=ENST00000437934.1,ENST00000437934.1;transcript_id=NA12877_ch_T0001893;gene_id=NA12877_ch_G0000708;Parent=NA12877_ch_T0001893;transcript_name=NA12877_ch_T0001893;gene_name=HSFY8P;ID=exon:NA12877_ch_T0001893:1;Name=HSFY8P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26729131	26732297	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=NA12877_ch_G0000709;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=NA12877_ch_G0000709;Name=ENSG00000295422
NA12877_chrY	CAT	transcript	26729131	26732297	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001894;gene_id=NA12877_ch_G0000709;Parent=NA12877_ch_G0000709;transcript_name=NA12877_ch_T0001894;gene_name=ENSG00000295422;ID=NA12877_ch_T0001894;Name=ENSG00000295422
NA12877_chrY	CAT	exon	26729131	26730473	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001894;gene_id=NA12877_ch_G0000709;Parent=NA12877_ch_T0001894;transcript_name=NA12877_ch_T0001894;gene_name=ENSG00000295422;ID=exon:NA12877_ch_T0001894:0;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26730474	26732008	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001894;gene_id=NA12877_ch_G0000709;Parent=NA12877_ch_T0001894;transcript_name=NA12877_ch_T0001894;gene_name=ENSG00000295422;ID=intron:NA12877_ch_T0001894:0;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26732009	26732069	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001894;gene_id=NA12877_ch_G0000709;Parent=NA12877_ch_T0001894;transcript_name=NA12877_ch_T0001894;gene_name=ENSG00000295422;ID=exon:NA12877_ch_T0001894:1;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26732070	26732186	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001894;gene_id=NA12877_ch_G0000709;Parent=NA12877_ch_T0001894;transcript_name=NA12877_ch_T0001894;gene_name=ENSG00000295422;ID=intron:NA12877_ch_T0001894:1;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26732187	26732297	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=NA12877_ch_T0001894;gene_id=NA12877_ch_G0000709;Parent=NA12877_ch_T0001894;transcript_name=NA12877_ch_T0001894;gene_name=ENSG00000295422;ID=exon:NA12877_ch_T0001894:2;Name=ENSG00000295422;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26747523	27029541	.	-	.	source_gene_common_name=ENSG00000299596;source_gene=ENSG00000299596.1;gene_id=NA12877_ch_G0000710;gene_biotype=lncRNA;gene_name=ENSG00000299596;gene_sources=liftoff;ID=NA12877_ch_G0000710;Name=ENSG00000299596
NA12877_chrY	CAT	transcript	26747523	26926482	1000	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=NA12877_ch_T0001895;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26747523	26748260	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001895:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26748261	26751177	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001895:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26751178	26751238	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001895:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26751239	26754490	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001895:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26754491	26754592	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001895:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26754593	26763670	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001895:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26763671	26763771	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001895:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26763772	26783111	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001895:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26783112	26783222	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001895:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26783223	26907918	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001895:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001895:5;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26907992	26926344	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001895:5;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26926345	26926482	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001895;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001895;transcript_name=NA12877_ch_T0001895;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001895:6;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26747841	26926495	1000	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=NA12877_ch_T0001896;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26747841	26748260	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001896:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26748261	26751177	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001896:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26751178	26751241	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001896:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26751242	26754490	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001896:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26754491	26754592	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001896:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26754593	26763670	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001896:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26763671	26763771	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001896:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26763772	26783111	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001896:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26783112	26783222	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001896:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26783223	26907918	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001896:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001896:5;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26907992	26926344	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001896:5;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26926345	26926495	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001896;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001896;transcript_name=NA12877_ch_T0001896;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001896:6;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26754377	26926504	1000	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001897;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001897;gene_name=ENSG00000299596;ID=NA12877_ch_T0001897;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26754377	26755693	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001897;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001897;transcript_name=NA12877_ch_T0001897;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001897:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26755694	26763670	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001897;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001897;transcript_name=NA12877_ch_T0001897;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001897:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26763671	26763771	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001897;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001897;transcript_name=NA12877_ch_T0001897;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001897:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26763772	26783111	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001897;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001897;transcript_name=NA12877_ch_T0001897;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001897:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26783112	26783222	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001897;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001897;transcript_name=NA12877_ch_T0001897;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001897:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26783223	26907918	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001897;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001897;transcript_name=NA12877_ch_T0001897;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001897:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001897;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001897;transcript_name=NA12877_ch_T0001897;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001897:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26907992	26926344	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001897;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001897;transcript_name=NA12877_ch_T0001897;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001897:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26926345	26926504	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001897;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001897;transcript_name=NA12877_ch_T0001897;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001897:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26755052	26926575	1000	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001898;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001898;gene_name=ENSG00000299596;ID=NA12877_ch_T0001898;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26755052	26755312	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001898;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001898;transcript_name=NA12877_ch_T0001898;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001898:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26755313	26763670	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001898;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001898;transcript_name=NA12877_ch_T0001898;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001898:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26763671	26763771	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001898;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001898;transcript_name=NA12877_ch_T0001898;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001898:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26763772	26783111	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001898;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001898;transcript_name=NA12877_ch_T0001898;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001898:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26783112	26783222	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001898;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001898;transcript_name=NA12877_ch_T0001898;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001898:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26783223	26907918	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001898;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001898;transcript_name=NA12877_ch_T0001898;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001898:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001898;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001898;transcript_name=NA12877_ch_T0001898;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001898:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26907992	26926344	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001898;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001898;transcript_name=NA12877_ch_T0001898;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001898:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26926345	26926575	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001898;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001898;transcript_name=NA12877_ch_T0001898;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001898:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26755052	26926496	1000	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=NA12877_ch_T0001899;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26755052	26755693	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001899:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26755694	26763670	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001899:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26763671	26763771	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001899:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26763772	26783111	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001899:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26783112	26783222	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001899:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26783223	26818545	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001899:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26818546	26818636	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001899:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26818637	26819496	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001899:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26819497	26819613	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001899:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26819614	26907918	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001899:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001899:5;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26907992	26926344	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001899:5;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26926345	26926496	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001899;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001899;transcript_name=NA12877_ch_T0001899;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001899:6;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26755356	26926496	1000	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001900;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001900;gene_name=ENSG00000299596;ID=NA12877_ch_T0001900;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26755356	26755693	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001900;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001900;transcript_name=NA12877_ch_T0001900;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001900:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26755694	26763670	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001900;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001900;transcript_name=NA12877_ch_T0001900;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001900:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26763671	26763771	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001900;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001900;transcript_name=NA12877_ch_T0001900;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001900:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26763772	26783111	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001900;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001900;transcript_name=NA12877_ch_T0001900;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001900:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26783112	26783222	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001900;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001900;transcript_name=NA12877_ch_T0001900;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001900:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26783223	26907918	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001900;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001900;transcript_name=NA12877_ch_T0001900;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001900:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001900;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001900;transcript_name=NA12877_ch_T0001900;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001900:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26907992	26913606	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001900;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001900;transcript_name=NA12877_ch_T0001900;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001900:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26913607	26913623	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001900;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001900;transcript_name=NA12877_ch_T0001900;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001900:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26913624	26926344	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001900;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001900;transcript_name=NA12877_ch_T0001900;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001900:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26926345	26926496	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001900;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001900;transcript_name=NA12877_ch_T0001900;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001900:5;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26763713	27005742	1000	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=NA12877_ch_T0001902;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26763713	26763771	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001902:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26763772	26783111	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001902:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26783112	26783222	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001902:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26783223	26907918	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001902:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001902:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26907992	26977768	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001902:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26977769	26977810	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001902:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26977811	26978910	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001902:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26978911	26979023	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001902:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26979024	26979111	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001902:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26979112	26979301	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001902:5;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26979302	26981271	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001902:5;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26981272	26981475	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001902:6;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26981476	26990893	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001902:6;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26990894	26990983	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001902:7;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26990984	27005599	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001902:7;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27005600	27005742	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001902;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001902;transcript_name=NA12877_ch_T0001902;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001902:8;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26782681	26926496	1000	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001903;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001903;gene_name=ENSG00000299596;ID=NA12877_ch_T0001903;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26782681	26783015	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001903;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001903;transcript_name=NA12877_ch_T0001903;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001903:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26783016	26783111	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001903;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001903;transcript_name=NA12877_ch_T0001903;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001903:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26783112	26783222	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001903;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001903;transcript_name=NA12877_ch_T0001903;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001903:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26783223	26907918	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001903;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001903;transcript_name=NA12877_ch_T0001903;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001903:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001903;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001903;transcript_name=NA12877_ch_T0001903;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001903:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26907992	26926344	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001903;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001903;transcript_name=NA12877_ch_T0001903;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001903:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26926345	26926496	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001903;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001903;transcript_name=NA12877_ch_T0001903;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001903:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26782705	26926495	1000	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001904;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001904;gene_name=ENSG00000299596;ID=NA12877_ch_T0001904;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26782705	26783015	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001904;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001904;transcript_name=NA12877_ch_T0001904;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001904:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26783016	26783111	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001904;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001904;transcript_name=NA12877_ch_T0001904;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001904:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26783112	26783222	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001904;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001904;transcript_name=NA12877_ch_T0001904;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001904:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26783223	26818545	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001904;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001904;transcript_name=NA12877_ch_T0001904;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001904:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26818546	26818636	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001904;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001904;transcript_name=NA12877_ch_T0001904;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001904:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26818637	26819496	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001904;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001904;transcript_name=NA12877_ch_T0001904;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001904:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26819497	26819613	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001904;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001904;transcript_name=NA12877_ch_T0001904;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001904:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26819614	26907918	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001904;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001904;transcript_name=NA12877_ch_T0001904;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001904:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001904;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001904;transcript_name=NA12877_ch_T0001904;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001904:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26907992	26926344	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001904;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001904;transcript_name=NA12877_ch_T0001904;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001904:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26926345	26926495	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001904;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001904;transcript_name=NA12877_ch_T0001904;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001904:5;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26859238	26926495	1000	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001910;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001910;gene_name=ENSG00000299596;ID=NA12877_ch_T0001910;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26859238	26859529	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001910;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001910;transcript_name=NA12877_ch_T0001910;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001910:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26859530	26861458	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001910;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001910;transcript_name=NA12877_ch_T0001910;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001910:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26861459	26861490	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001910;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001910;transcript_name=NA12877_ch_T0001910;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001910:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26861491	26870112	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001910;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001910;transcript_name=NA12877_ch_T0001910;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001910:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26870113	26870156	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001910;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001910;transcript_name=NA12877_ch_T0001910;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001910:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26870157	26907918	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001910;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001910;transcript_name=NA12877_ch_T0001910;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001910:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001910;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001910;transcript_name=NA12877_ch_T0001910;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001910:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26907992	26926344	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001910;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001910;transcript_name=NA12877_ch_T0001910;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001910:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26926345	26926495	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001910;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001910;transcript_name=NA12877_ch_T0001910;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001910:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26869742	26926500	1000	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001911;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001911;gene_name=ENSG00000299596;ID=NA12877_ch_T0001911;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26869742	26870156	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001911;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001911;transcript_name=NA12877_ch_T0001911;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001911:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26870157	26898173	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001911;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001911;transcript_name=NA12877_ch_T0001911;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001911:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26898174	26898300	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001911;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001911;transcript_name=NA12877_ch_T0001911;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001911:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26898301	26907918	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001911;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001911;transcript_name=NA12877_ch_T0001911;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001911:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001911;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001911;transcript_name=NA12877_ch_T0001911;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001911:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26907992	26926344	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001911;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001911;transcript_name=NA12877_ch_T0001911;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001911:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26926345	26926500	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001911;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001911;transcript_name=NA12877_ch_T0001911;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001911:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26905448	26926500	1000	-	.	source_transcript=ENST00000764966.1;source_transcript_name=ENST00000764966;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764966.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001913;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001913;gene_name=ENSG00000299596;ID=NA12877_ch_T0001913;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26905448	26906074	.	-	.	source_transcript=ENST00000764966.1;source_transcript_name=ENST00000764966;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764966.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001913;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001913;transcript_name=NA12877_ch_T0001913;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001913:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26906075	26907918	.	-	.	source_transcript=ENST00000764966.1;source_transcript_name=ENST00000764966;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764966.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001913;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001913;transcript_name=NA12877_ch_T0001913;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001913:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000764966.1;source_transcript_name=ENST00000764966;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764966.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001913;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001913;transcript_name=NA12877_ch_T0001913;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001913:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26907992	26926344	.	-	.	source_transcript=ENST00000764966.1;source_transcript_name=ENST00000764966;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764966.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001913;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001913;transcript_name=NA12877_ch_T0001913;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001913:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26926345	26926500	.	-	.	source_transcript=ENST00000764966.1;source_transcript_name=ENST00000764966;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764966.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001913;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001913;transcript_name=NA12877_ch_T0001913;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001913:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26979114	27029541	1000	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001918;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_G0000710;transcript_name=NA12877_ch_T0001918;gene_name=ENSG00000299596;ID=NA12877_ch_T0001918;Name=ENSG00000299596
NA12877_chrY	CAT	exon	26979114	26979301	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001918;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001918;transcript_name=NA12877_ch_T0001918;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001918:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26979302	26981271	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001918;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001918;transcript_name=NA12877_ch_T0001918;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001918:0;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26981272	26981475	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001918;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001918;transcript_name=NA12877_ch_T0001918;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001918:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26981476	26990893	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001918;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001918;transcript_name=NA12877_ch_T0001918;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001918:1;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26990894	26990983	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001918;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001918;transcript_name=NA12877_ch_T0001918;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001918:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26990984	27028791	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001918;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001918;transcript_name=NA12877_ch_T0001918;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001918:2;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27028792	27028974	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001918;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001918;transcript_name=NA12877_ch_T0001918;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001918:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27028975	27029376	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001918;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001918;transcript_name=NA12877_ch_T0001918;gene_name=ENSG00000299596;ID=intron:NA12877_ch_T0001918:3;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27029377	27029541	.	-	.	source_transcript=ENST00000764965.1;source_transcript_name=ENST00000764965;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764965.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=NA12877_ch_T0001918;gene_id=NA12877_ch_G0000710;Parent=NA12877_ch_T0001918;transcript_name=NA12877_ch_T0001918;gene_name=ENSG00000299596;ID=exon:NA12877_ch_T0001918:4;Name=ENSG00000299596;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26755621	26788335	.	-	.	source_gene_common_name=OFD1P15Y;source_gene=ENSG00000234888.1;gene_id=NA12877_ch_G0000711;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P15Y;gene_sources=liftoff;ID=NA12877_ch_G0000711;Name=OFD1P15Y
NA12877_chrY	CAT	transcript	26755621	26788335	1000	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_G0000711;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=NA12877_ch_T0001901;Name=OFD1P15Y
NA12877_chrY	CAT	exon	26755621	26755691	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=exon:NA12877_ch_T0001901:0;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26755692	26756872	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=intron:NA12877_ch_T0001901:0;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26756873	26757036	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=exon:NA12877_ch_T0001901:1;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26757037	26763674	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=intron:NA12877_ch_T0001901:1;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26763675	26763771	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=exon:NA12877_ch_T0001901:2;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26763772	26783125	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=intron:NA12877_ch_T0001901:2;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26783126	26783222	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=exon:NA12877_ch_T0001901:3;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26783223	26783591	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=intron:NA12877_ch_T0001901:3;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26783592	26784211	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=exon:NA12877_ch_T0001901:4;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26784212	26785928	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=intron:NA12877_ch_T0001901:4;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26785929	26786041	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=exon:NA12877_ch_T0001901:5;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26786042	26786577	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=intron:NA12877_ch_T0001901:5;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26786578	26786702	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=exon:NA12877_ch_T0001901:6;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26786703	26788230	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=intron:NA12877_ch_T0001901:6;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26788231	26788335	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=NA12877_ch_T0001901;gene_id=NA12877_ch_G0000711;Parent=NA12877_ch_T0001901;transcript_name=NA12877_ch_T0001901;gene_name=OFD1P15Y;ID=exon:NA12877_ch_T0001901:7;Name=OFD1P15Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26809845	26815299	.	+	.	source_gene_common_name=ENSG00000299625;source_gene=ENSG00000299625.1;alternative_source_transcripts=ENST00000765190.1,ENST00000765190.1;gene_id=NA12877_ch_G0000712;gene_biotype=lncRNA;gene_name=ENSG00000299625;gene_sources=liftoff;ID=NA12877_ch_G0000712;Name=ENSG00000299625
NA12877_chrY	CAT	transcript	26809845	26815293	1000	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765190.1,ENST00000765190.1;transcript_id=NA12877_ch_T0001905;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_G0000712;transcript_name=NA12877_ch_T0001905;gene_name=ENSG00000299625;ID=NA12877_ch_T0001905;Name=ENSG00000299625
NA12877_chrY	CAT	exon	26809845	26810184	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765190.1,ENST00000765190.1;transcript_id=NA12877_ch_T0001905;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_T0001905;transcript_name=NA12877_ch_T0001905;gene_name=ENSG00000299625;ID=exon:NA12877_ch_T0001905:0;Name=ENSG00000299625;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26810185	26814102	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765190.1,ENST00000765190.1;transcript_id=NA12877_ch_T0001905;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_T0001905;transcript_name=NA12877_ch_T0001905;gene_name=ENSG00000299625;ID=intron:NA12877_ch_T0001905:0;Name=ENSG00000299625;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26814103	26814229	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765190.1,ENST00000765190.1;transcript_id=NA12877_ch_T0001905;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_T0001905;transcript_name=NA12877_ch_T0001905;gene_name=ENSG00000299625;ID=exon:NA12877_ch_T0001905:1;Name=ENSG00000299625;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26814230	26814593	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765190.1,ENST00000765190.1;transcript_id=NA12877_ch_T0001905;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_T0001905;transcript_name=NA12877_ch_T0001905;gene_name=ENSG00000299625;ID=intron:NA12877_ch_T0001905:1;Name=ENSG00000299625;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26814594	26815293	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765190.1,ENST00000765190.1;transcript_id=NA12877_ch_T0001905;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_T0001905;transcript_name=NA12877_ch_T0001905;gene_name=ENSG00000299625;ID=exon:NA12877_ch_T0001905:2;Name=ENSG00000299625;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26809846	26815299	1000	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1,ENST00000765189.1;transcript_id=NA12877_ch_T0001906;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_G0000712;transcript_name=NA12877_ch_T0001906;gene_name=ENSG00000299625;ID=NA12877_ch_T0001906;Name=ENSG00000299625
NA12877_chrY	CAT	exon	26809846	26810184	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1,ENST00000765189.1;transcript_id=NA12877_ch_T0001906;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_T0001906;transcript_name=NA12877_ch_T0001906;gene_name=ENSG00000299625;ID=exon:NA12877_ch_T0001906:0;Name=ENSG00000299625;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26810185	26812100	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1,ENST00000765189.1;transcript_id=NA12877_ch_T0001906;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_T0001906;transcript_name=NA12877_ch_T0001906;gene_name=ENSG00000299625;ID=intron:NA12877_ch_T0001906:0;Name=ENSG00000299625;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26812101	26812234	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1,ENST00000765189.1;transcript_id=NA12877_ch_T0001906;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_T0001906;transcript_name=NA12877_ch_T0001906;gene_name=ENSG00000299625;ID=exon:NA12877_ch_T0001906:1;Name=ENSG00000299625;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26812235	26814102	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1,ENST00000765189.1;transcript_id=NA12877_ch_T0001906;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_T0001906;transcript_name=NA12877_ch_T0001906;gene_name=ENSG00000299625;ID=intron:NA12877_ch_T0001906:1;Name=ENSG00000299625;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26814103	26814229	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1,ENST00000765189.1;transcript_id=NA12877_ch_T0001906;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_T0001906;transcript_name=NA12877_ch_T0001906;gene_name=ENSG00000299625;ID=exon:NA12877_ch_T0001906:2;Name=ENSG00000299625;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26814230	26814593	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1,ENST00000765189.1;transcript_id=NA12877_ch_T0001906;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_T0001906;transcript_name=NA12877_ch_T0001906;gene_name=ENSG00000299625;ID=intron:NA12877_ch_T0001906:2;Name=ENSG00000299625;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26814594	26815299	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000765189.1,ENST00000765189.1;transcript_id=NA12877_ch_T0001906;gene_id=NA12877_ch_G0000712;Parent=NA12877_ch_T0001906;transcript_name=NA12877_ch_T0001906;gene_name=ENSG00000299625;ID=exon:NA12877_ch_T0001906:3;Name=ENSG00000299625;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26821500	26835631	.	+	.	source_gene_common_name=ENSG00000293280;source_gene=ENSG00000293280.2;gene_id=NA12877_ch_G0000713;gene_biotype=lncRNA;gene_name=ENSG00000293280;gene_sources=liftoff;ID=NA12877_ch_G0000713;Name=ENSG00000293280
NA12877_chrY	CAT	transcript	26821500	26829993	1000	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_G0000713;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=NA12877_ch_T0001907;Name=ENSG00000293280
NA12877_chrY	CAT	exon	26821500	26821663	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001907:0;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26821664	26822417	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001907:0;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26822418	26822497	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001907:1;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26822498	26823511	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001907:1;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26823512	26823624	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001907:2;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26823625	26824077	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001907:2;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26824078	26824181	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001907:3;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26824182	26826889	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001907:3;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26826890	26827067	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001907:4;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26827068	26829002	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001907:4;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26829003	26829155	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001907:5;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26829156	26829733	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001907:5;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26829734	26829993	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001907;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001907;transcript_name=NA12877_ch_T0001907;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001907:6;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	26821510	26835631	1000	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_G0000713;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=NA12877_ch_T0001908;Name=ENSG00000293280
NA12877_chrY	CAT	exon	26821510	26821663	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001908:0;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26821664	26822417	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001908:0;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26822418	26822497	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001908:1;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26822498	26823511	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001908:1;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26823512	26823624	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001908:2;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26823625	26824077	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001908:2;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26824078	26824181	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001908:3;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26824182	26826889	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001908:3;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26826890	26827067	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001908:4;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26827068	26829002	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001908:4;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26829003	26829155	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001908:5;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26829156	26831162	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001908:5;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26831163	26831277	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001908:6;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26831278	26835209	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=intron:NA12877_ch_T0001908:6;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26835210	26835631	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=NA12877_ch_T0001908;gene_id=NA12877_ch_G0000713;Parent=NA12877_ch_T0001908;transcript_name=NA12877_ch_T0001908;gene_name=ENSG00000293280;ID=exon:NA12877_ch_T0001908:7;Name=ENSG00000293280;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26823516	26833150	.	+	.	source_gene_common_name=RBMY2DP;source_gene=ENSG00000215507.11;gene_id=NA12877_ch_G0000714;gene_biotype=transcribed_processed_pseudogene;gene_name=RBMY2DP;gene_sources=liftoff;ID=NA12877_ch_G0000714;Name=RBMY2DP
NA12877_chrY	CAT	transcript	26823516	26833150	1000	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_G0000714;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=NA12877_ch_T0001909;Name=RBMY2DP
NA12877_chrY	CAT	exon	26823516	26823624	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=exon:NA12877_ch_T0001909:0;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26823625	26824077	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=intron:NA12877_ch_T0001909:0;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26824078	26824181	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=exon:NA12877_ch_T0001909:1;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26824182	26826889	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=intron:NA12877_ch_T0001909:1;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26826890	26827067	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=exon:NA12877_ch_T0001909:2;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26827068	26829002	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=intron:NA12877_ch_T0001909:2;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26829003	26829155	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=exon:NA12877_ch_T0001909:3;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26829156	26831162	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=intron:NA12877_ch_T0001909:3;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26831163	26831277	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=exon:NA12877_ch_T0001909:4;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26831278	26832146	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=intron:NA12877_ch_T0001909:4;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26832147	26832257	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=exon:NA12877_ch_T0001909:5;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26832258	26832339	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=intron:NA12877_ch_T0001909:5;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26832340	26832427	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=exon:NA12877_ch_T0001909:6;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26832428	26832851	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=intron:NA12877_ch_T0001909:6;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26832852	26833150	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=NA12877_ch_T0001909;gene_id=NA12877_ch_G0000714;Parent=NA12877_ch_T0001909;transcript_name=NA12877_ch_T0001909;gene_name=RBMY2DP;ID=exon:NA12877_ch_T0001909:7;Name=RBMY2DP;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26898174	26907991	.	-	.	source_gene_common_name=REREP2Y;source_gene=ENSG00000235014.1;gene_id=NA12877_ch_G0000715;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=NA12877_ch_G0000715;Name=REREP2Y
NA12877_chrY	CAT	transcript	26898174	26907991	1000	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=NA12877_ch_T0001912;gene_id=NA12877_ch_G0000715;Parent=NA12877_ch_G0000715;transcript_name=NA12877_ch_T0001912;gene_name=REREP2Y;ID=NA12877_ch_T0001912;Name=REREP2Y
NA12877_chrY	CAT	exon	26898174	26898300	.	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=NA12877_ch_T0001912;gene_id=NA12877_ch_G0000715;Parent=NA12877_ch_T0001912;transcript_name=NA12877_ch_T0001912;gene_name=REREP2Y;ID=exon:NA12877_ch_T0001912:0;Name=REREP2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26898301	26907918	.	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=NA12877_ch_T0001912;gene_id=NA12877_ch_G0000715;Parent=NA12877_ch_T0001912;transcript_name=NA12877_ch_T0001912;gene_name=REREP2Y;ID=intron:NA12877_ch_T0001912:0;Name=REREP2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26907919	26907991	.	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=NA12877_ch_T0001912;gene_id=NA12877_ch_G0000715;Parent=NA12877_ch_T0001912;transcript_name=NA12877_ch_T0001912;gene_name=REREP2Y;ID=exon:NA12877_ch_T0001912:1;Name=REREP2Y;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26934452	26934553	.	-	.	source_gene_common_name=ENSG00000289705;source_gene=ENSG00000289705.1;alternative_source_transcripts=ENST00000696462.1,ENST00000696462.1;gene_id=NA12877_ch_G0000716;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000289705;gene_sources=liftoff;ID=NA12877_ch_G0000716;Name=ENSG00000289705
NA12877_chrY	CAT	transcript	26934452	26934553	1000	-	.	source_transcript=ENST00000696462.1;source_transcript_name=ENST00000696462;source_gene=ENSG00000289705.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289705.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696462.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289705;alternative_source_transcripts=ENST00000696462.1,ENST00000696462.1;transcript_id=NA12877_ch_T0001914;gene_id=NA12877_ch_G0000716;Parent=NA12877_ch_G0000716;transcript_name=NA12877_ch_T0001914;gene_name=ENSG00000289705;ID=NA12877_ch_T0001914;Name=ENSG00000289705
NA12877_chrY	CAT	exon	26934452	26934553	.	-	.	source_transcript=ENST00000696462.1;source_transcript_name=ENST00000696462;source_gene=ENSG00000289705.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289705.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696462.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289705;alternative_source_transcripts=ENST00000696462.1,ENST00000696462.1;transcript_id=NA12877_ch_T0001914;gene_id=NA12877_ch_G0000716;Parent=NA12877_ch_T0001914;transcript_name=NA12877_ch_T0001914;gene_name=ENSG00000289705;ID=exon:NA12877_ch_T0001914:0;Name=ENSG00000289705;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26944193	26944415	.	-	.	source_gene_common_name=ENSG00000225876;source_gene=ENSG00000225876.1;alternative_source_transcripts=ENST00000426199.1,ENST00000426199.1;gene_id=NA12877_ch_G0000717;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000225876;gene_sources=liftoff;ID=NA12877_ch_G0000717;Name=ENSG00000225876
NA12877_chrY	CAT	transcript	26944193	26944415	1000	-	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;alternative_source_transcripts=ENST00000426199.1,ENST00000426199.1;transcript_id=NA12877_ch_T0001915;gene_id=NA12877_ch_G0000717;Parent=NA12877_ch_G0000717;transcript_name=NA12877_ch_T0001915;gene_name=ENSG00000225876;ID=NA12877_ch_T0001915;Name=ENSG00000225876
NA12877_chrY	CAT	exon	26944193	26944415	.	-	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;alternative_source_transcripts=ENST00000426199.1,ENST00000426199.1;transcript_id=NA12877_ch_T0001915;gene_id=NA12877_ch_G0000717;Parent=NA12877_ch_T0001915;transcript_name=NA12877_ch_T0001915;gene_name=ENSG00000225876;ID=exon:NA12877_ch_T0001915:0;Name=ENSG00000225876;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26947226	26947363	.	+	.	source_gene_common_name=SNORA70;source_gene=ENSG00000251796.1;alternative_source_transcripts=ENST00000515987.1,ENST00000515987.1;gene_id=NA12877_ch_G0000718;gene_biotype=snoRNA;gene_name=SNORA70;gene_sources=liftoff;ID=NA12877_ch_G0000718;Name=SNORA70
NA12877_chrY	CAT	transcript	26947226	26947363	1000	+	.	source_transcript=ENST00000515987.1;source_transcript_name=SNORA70.11-201;source_gene=ENSG00000251796.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251796.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000515987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515987.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000515987.1,ENST00000515987.1;transcript_id=NA12877_ch_T0001916;gene_id=NA12877_ch_G0000718;Parent=NA12877_ch_G0000718;transcript_name=NA12877_ch_T0001916;gene_name=SNORA70;ID=NA12877_ch_T0001916;Name=SNORA70
NA12877_chrY	CAT	exon	26947226	26947363	.	+	.	source_transcript=ENST00000515987.1;source_transcript_name=SNORA70.11-201;source_gene=ENSG00000251796.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251796.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000515987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515987.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000515987.1,ENST00000515987.1;transcript_id=NA12877_ch_T0001916;gene_id=NA12877_ch_G0000718;Parent=NA12877_ch_T0001916;transcript_name=NA12877_ch_T0001916;gene_name=SNORA70;ID=exon:NA12877_ch_T0001916:0;Name=SNORA70;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	26977769	27054268	.	-	.	source_gene_common_name=PPP1R12BP1;source_gene=ENSG00000229238.3;gene_id=NA12877_ch_G0000719;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=PPP1R12BP1;gene_sources=liftoff;ID=NA12877_ch_G0000719;Name=PPP1R12BP1
NA12877_chrY	CAT	transcript	26977769	27054268	1000	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_G0000719;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=NA12877_ch_T0001917;Name=PPP1R12BP1
NA12877_chrY	CAT	exon	26977769	26977810	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:0;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26977811	26978910	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=intron:NA12877_ch_T0001917:0;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26978911	26979023	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:1;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26979024	26979111	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=intron:NA12877_ch_T0001917:1;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26979112	26979301	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:2;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26979302	26981271	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=intron:NA12877_ch_T0001917:2;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26981272	26981475	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:3;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26981476	26990893	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=intron:NA12877_ch_T0001917:3;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	26990894	26990983	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:4;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	26990984	27028791	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=intron:NA12877_ch_T0001917:4;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27028792	27028974	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:5;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27028975	27032778	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=intron:NA12877_ch_T0001917:5;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27032779	27032918	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:6;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27032919	27033574	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=intron:NA12877_ch_T0001917:6;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27033575	27033654	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:7;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27033655	27035495	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=intron:NA12877_ch_T0001917:7;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27035496	27035569	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:8;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27035570	27037226	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=intron:NA12877_ch_T0001917:8;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27037227	27037371	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:9;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27037372	27038684	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=intron:NA12877_ch_T0001917:9;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27038685	27038844	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:10;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27038845	27048309	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=intron:NA12877_ch_T0001917:10;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27048310	27048428	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:11;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27048429	27054137	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=intron:NA12877_ch_T0001917:11;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27054138	27054268	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=NA12877_ch_T0001917;gene_id=NA12877_ch_G0000719;Parent=NA12877_ch_T0001917;transcript_name=NA12877_ch_T0001917;gene_name=PPP1R12BP1;ID=exon:NA12877_ch_T0001917:12;Name=PPP1R12BP1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	27060839	27060942	.	+	.	source_gene_common_name=RNU6-1314P;source_gene=ENSG00000252948.1;alternative_source_transcripts=ENST00000517139.1,ENST00000517139.1;gene_id=NA12877_ch_G0000720;gene_biotype=snRNA;gene_name=RNU6-1314P;gene_sources=liftoff;ID=NA12877_ch_G0000720;Name=RNU6-1314P
NA12877_chrY	CAT	transcript	27060839	27060942	1000	+	.	source_transcript=ENST00000517139.1;source_transcript_name=RNU6-1314P-201;source_gene=ENSG00000252948.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252948.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517139.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1314P;alternative_source_transcripts=ENST00000517139.1,ENST00000517139.1;transcript_id=NA12877_ch_T0001919;gene_id=NA12877_ch_G0000720;Parent=NA12877_ch_G0000720;transcript_name=NA12877_ch_T0001919;gene_name=RNU6-1314P;ID=NA12877_ch_T0001919;Name=RNU6-1314P
NA12877_chrY	CAT	exon	27060839	27060942	.	+	.	source_transcript=ENST00000517139.1;source_transcript_name=RNU6-1314P-201;source_gene=ENSG00000252948.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252948.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517139.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1314P;alternative_source_transcripts=ENST00000517139.1,ENST00000517139.1;transcript_id=NA12877_ch_T0001919;gene_id=NA12877_ch_G0000720;Parent=NA12877_ch_T0001919;transcript_name=NA12877_ch_T0001919;gene_name=RNU6-1314P;ID=exon:NA12877_ch_T0001919:0;Name=RNU6-1314P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	27100462	27101081	.	+	.	source_gene_common_name=CYCSP48;source_gene=ENSG00000233843.1;alternative_source_transcripts=ENST00000417124.1,ENST00000417124.1;gene_id=NA12877_ch_G0000721;gene_biotype=processed_pseudogene;gene_name=CYCSP48;gene_sources=liftoff;ID=NA12877_ch_G0000721;Name=CYCSP48
NA12877_chrY	CAT	transcript	27100462	27101081	1000	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1,ENST00000417124.1;transcript_id=NA12877_ch_T0001920;gene_id=NA12877_ch_G0000721;Parent=NA12877_ch_G0000721;transcript_name=NA12877_ch_T0001920;gene_name=CYCSP48;ID=NA12877_ch_T0001920;Name=CYCSP48
NA12877_chrY	CAT	exon	27100462	27100512	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1,ENST00000417124.1;transcript_id=NA12877_ch_T0001920;gene_id=NA12877_ch_G0000721;Parent=NA12877_ch_T0001920;transcript_name=NA12877_ch_T0001920;gene_name=CYCSP48;ID=exon:NA12877_ch_T0001920:0;Name=CYCSP48;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27100513	27100809	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1,ENST00000417124.1;transcript_id=NA12877_ch_T0001920;gene_id=NA12877_ch_G0000721;Parent=NA12877_ch_T0001920;transcript_name=NA12877_ch_T0001920;gene_name=CYCSP48;ID=intron:NA12877_ch_T0001920:0;Name=CYCSP48;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27100810	27101081	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1,ENST00000417124.1;transcript_id=NA12877_ch_T0001920;gene_id=NA12877_ch_G0000721;Parent=NA12877_ch_T0001920;transcript_name=NA12877_ch_T0001920;gene_name=CYCSP48;ID=exon:NA12877_ch_T0001920:1;Name=CYCSP48;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	27109009	27208100	.	+	.	source_gene_common_name=ENSG00000294742;source_gene=ENSG00000294742.1;gene_id=NA12877_ch_G0000722;gene_biotype=lncRNA;gene_name=ENSG00000294742;gene_sources=liftoff;ID=NA12877_ch_G0000722;Name=ENSG00000294742
NA12877_chrY	CAT	transcript	27109009	27153939	1000	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001921;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_G0000722;transcript_name=NA12877_ch_T0001921;gene_name=ENSG00000294742;ID=NA12877_ch_T0001921;Name=ENSG00000294742
NA12877_chrY	CAT	exon	27109009	27109101	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001921;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001921;transcript_name=NA12877_ch_T0001921;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001921:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109102	27109549	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001921;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001921;transcript_name=NA12877_ch_T0001921;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001921:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27109550	27109796	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001921;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001921;transcript_name=NA12877_ch_T0001921;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001921:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109797	27136781	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001921;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001921;transcript_name=NA12877_ch_T0001921;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001921:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27136782	27136810	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001921;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001921;transcript_name=NA12877_ch_T0001921;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001921:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27136811	27136904	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001921;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001921;transcript_name=NA12877_ch_T0001921;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001921:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27136905	27136977	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001921;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001921;transcript_name=NA12877_ch_T0001921;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001921:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27136978	27153835	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001921;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001921;transcript_name=NA12877_ch_T0001921;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001921:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27153836	27153939	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001921;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001921;transcript_name=NA12877_ch_T0001921;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001921:4;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	27109025	27138855	1000	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001922;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_G0000722;transcript_name=NA12877_ch_T0001922;gene_name=ENSG00000294742;ID=NA12877_ch_T0001922;Name=ENSG00000294742
NA12877_chrY	CAT	exon	27109025	27109101	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001922;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001922;transcript_name=NA12877_ch_T0001922;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001922:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109102	27109549	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001922;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001922;transcript_name=NA12877_ch_T0001922;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001922:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27109550	27109796	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001922;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001922;transcript_name=NA12877_ch_T0001922;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001922:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109797	27136781	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001922;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001922;transcript_name=NA12877_ch_T0001922;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001922:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27136782	27136810	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001922;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001922;transcript_name=NA12877_ch_T0001922;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001922:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27136811	27138659	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001922;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001922;transcript_name=NA12877_ch_T0001922;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001922:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27138660	27138855	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001922;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001922;transcript_name=NA12877_ch_T0001922;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001922:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	27109030	27138858	1000	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001923;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_G0000722;transcript_name=NA12877_ch_T0001923;gene_name=ENSG00000294742;ID=NA12877_ch_T0001923;Name=ENSG00000294742
NA12877_chrY	CAT	exon	27109030	27109101	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001923;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001923;transcript_name=NA12877_ch_T0001923;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001923:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109102	27109549	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001923;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001923;transcript_name=NA12877_ch_T0001923;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001923:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27109550	27109796	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001923;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001923;transcript_name=NA12877_ch_T0001923;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001923:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109797	27136781	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001923;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001923;transcript_name=NA12877_ch_T0001923;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001923:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27136782	27136810	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001923;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001923;transcript_name=NA12877_ch_T0001923;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001923:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27136811	27136904	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001923;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001923;transcript_name=NA12877_ch_T0001923;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001923:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27136905	27136977	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001923;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001923;transcript_name=NA12877_ch_T0001923;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001923:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27136978	27138659	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001923;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001923;transcript_name=NA12877_ch_T0001923;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001923:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27138660	27138858	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001923;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001923;transcript_name=NA12877_ch_T0001923;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001923:4;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	27109030	27208100	1000	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_G0000722;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=NA12877_ch_T0001924;Name=ENSG00000294742
NA12877_chrY	CAT	exon	27109030	27109101	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001924:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109102	27109549	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001924:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27109550	27109796	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001924:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109797	27136781	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001924:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27136782	27136810	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001924:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27136811	27138781	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001924:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27138782	27138854	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001924:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27138855	27140620	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001924:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27140621	27140651	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001924:4;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27140652	27142436	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001924:4;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27142437	27142612	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001924:5;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27142613	27153835	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001924:5;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27153836	27153939	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001924:6;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27153940	27208066	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001924:6;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27208067	27208100	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001924;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001924;transcript_name=NA12877_ch_T0001924;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001924:7;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	27109030	27138789	1000	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001925;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_G0000722;transcript_name=NA12877_ch_T0001925;gene_name=ENSG00000294742;ID=NA12877_ch_T0001925;Name=ENSG00000294742
NA12877_chrY	CAT	exon	27109030	27109101	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001925;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001925;transcript_name=NA12877_ch_T0001925;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001925:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109102	27109549	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001925;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001925;transcript_name=NA12877_ch_T0001925;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001925:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27109550	27109796	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001925;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001925;transcript_name=NA12877_ch_T0001925;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001925:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109797	27122831	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001925;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001925;transcript_name=NA12877_ch_T0001925;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001925:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27122832	27122899	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001925;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001925;transcript_name=NA12877_ch_T0001925;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001925:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27122900	27136781	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001925;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001925;transcript_name=NA12877_ch_T0001925;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001925:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27136782	27136810	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001925;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001925;transcript_name=NA12877_ch_T0001925;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001925:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27136811	27138659	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001925;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001925;transcript_name=NA12877_ch_T0001925;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001925:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27138660	27138789	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001925;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001925;transcript_name=NA12877_ch_T0001925;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001925:4;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	27109052	27153924	1000	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001926;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_G0000722;transcript_name=NA12877_ch_T0001926;gene_name=ENSG00000294742;ID=NA12877_ch_T0001926;Name=ENSG00000294742
NA12877_chrY	CAT	exon	27109052	27109101	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001926;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001926;transcript_name=NA12877_ch_T0001926;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001926:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109102	27109549	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001926;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001926;transcript_name=NA12877_ch_T0001926;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001926:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27109550	27109796	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001926;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001926;transcript_name=NA12877_ch_T0001926;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001926:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109797	27136781	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001926;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001926;transcript_name=NA12877_ch_T0001926;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001926:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27136782	27136810	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001926;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001926;transcript_name=NA12877_ch_T0001926;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001926:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27136811	27153835	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001926;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001926;transcript_name=NA12877_ch_T0001926;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001926:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27153836	27153924	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001926;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001926;transcript_name=NA12877_ch_T0001926;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001926:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	27109056	27138799	1000	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_G0000722;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=NA12877_ch_T0001927;Name=ENSG00000294742
NA12877_chrY	CAT	exon	27109056	27109101	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001927:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109102	27109549	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001927:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27109550	27109796	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001927:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109797	27120244	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001927:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27120245	27120382	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001927:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27120383	27122831	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001927:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27122832	27122899	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001927:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27122900	27126259	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001927:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27126260	27126416	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001927:4;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27126417	27136781	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001927:4;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27136782	27136810	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001927:5;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27136811	27136904	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001927:5;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27136905	27136977	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001927:6;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27136978	27138659	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001927:6;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27138660	27138799	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001927;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001927;transcript_name=NA12877_ch_T0001927;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001927:7;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	27109104	27138843	1000	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001928;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_G0000722;transcript_name=NA12877_ch_T0001928;gene_name=ENSG00000294742;ID=NA12877_ch_T0001928;Name=ENSG00000294742
NA12877_chrY	CAT	exon	27109104	27109201	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001928;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001928;transcript_name=NA12877_ch_T0001928;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001928:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109202	27109549	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001928;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001928;transcript_name=NA12877_ch_T0001928;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001928:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27109550	27109796	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001928;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001928;transcript_name=NA12877_ch_T0001928;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001928:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109797	27136781	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001928;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001928;transcript_name=NA12877_ch_T0001928;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001928:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27136782	27136810	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001928;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001928;transcript_name=NA12877_ch_T0001928;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001928:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27136811	27138659	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001928;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001928;transcript_name=NA12877_ch_T0001928;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001928:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27138660	27138843	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001928;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001928;transcript_name=NA12877_ch_T0001928;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001928:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	27109549	27153926	1000	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001929;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_G0000722;transcript_name=NA12877_ch_T0001929;gene_name=ENSG00000294742;ID=NA12877_ch_T0001929;Name=ENSG00000294742
NA12877_chrY	CAT	exon	27109549	27109796	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001929;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001929;transcript_name=NA12877_ch_T0001929;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001929:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109797	27136781	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001929;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001929;transcript_name=NA12877_ch_T0001929;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001929:0;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27136782	27136810	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001929;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001929;transcript_name=NA12877_ch_T0001929;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001929:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27136811	27138781	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001929;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001929;transcript_name=NA12877_ch_T0001929;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001929:1;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27138782	27138854	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001929;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001929;transcript_name=NA12877_ch_T0001929;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001929:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27138855	27140620	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001929;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001929;transcript_name=NA12877_ch_T0001929;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001929:2;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27140621	27140651	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001929;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001929;transcript_name=NA12877_ch_T0001929;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001929:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27140652	27142433	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001929;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001929;transcript_name=NA12877_ch_T0001929;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001929:3;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27142434	27142612	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001929;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001929;transcript_name=NA12877_ch_T0001929;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001929:4;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27142613	27153835	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001929;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001929;transcript_name=NA12877_ch_T0001929;gene_name=ENSG00000294742;ID=intron:NA12877_ch_T0001929:4;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27153836	27153926	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=NA12877_ch_T0001929;gene_id=NA12877_ch_G0000722;Parent=NA12877_ch_T0001929;transcript_name=NA12877_ch_T0001929;gene_name=ENSG00000294742;ID=exon:NA12877_ch_T0001929:5;Name=ENSG00000294742;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	27109666	27120386	.	+	.	source_gene_common_name=ANKRD36P1;source_gene=ENSG00000188399.5;gene_id=NA12877_ch_G0000723;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ANKRD36P1;gene_sources=liftoff;ID=NA12877_ch_G0000723;Name=ANKRD36P1
NA12877_chrY	CAT	transcript	27109666	27120386	1000	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=NA12877_ch_T0001930;gene_id=NA12877_ch_G0000723;Parent=NA12877_ch_G0000723;transcript_name=NA12877_ch_T0001930;gene_name=ANKRD36P1;ID=NA12877_ch_T0001930;Name=ANKRD36P1
NA12877_chrY	CAT	exon	27109666	27109796	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=NA12877_ch_T0001930;gene_id=NA12877_ch_G0000723;Parent=NA12877_ch_T0001930;transcript_name=NA12877_ch_T0001930;gene_name=ANKRD36P1;ID=exon:NA12877_ch_T0001930:0;Name=ANKRD36P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27109797	27113898	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=NA12877_ch_T0001930;gene_id=NA12877_ch_G0000723;Parent=NA12877_ch_T0001930;transcript_name=NA12877_ch_T0001930;gene_name=ANKRD36P1;ID=intron:NA12877_ch_T0001930:0;Name=ANKRD36P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27113899	27114013	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=NA12877_ch_T0001930;gene_id=NA12877_ch_G0000723;Parent=NA12877_ch_T0001930;transcript_name=NA12877_ch_T0001930;gene_name=ANKRD36P1;ID=exon:NA12877_ch_T0001930:1;Name=ANKRD36P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27114014	27114179	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=NA12877_ch_T0001930;gene_id=NA12877_ch_G0000723;Parent=NA12877_ch_T0001930;transcript_name=NA12877_ch_T0001930;gene_name=ANKRD36P1;ID=intron:NA12877_ch_T0001930:1;Name=ANKRD36P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27114180	27114353	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=NA12877_ch_T0001930;gene_id=NA12877_ch_G0000723;Parent=NA12877_ch_T0001930;transcript_name=NA12877_ch_T0001930;gene_name=ANKRD36P1;ID=exon:NA12877_ch_T0001930:2;Name=ANKRD36P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27114354	27118694	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=NA12877_ch_T0001930;gene_id=NA12877_ch_G0000723;Parent=NA12877_ch_T0001930;transcript_name=NA12877_ch_T0001930;gene_name=ANKRD36P1;ID=intron:NA12877_ch_T0001930:2;Name=ANKRD36P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27118695	27118791	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=NA12877_ch_T0001930;gene_id=NA12877_ch_G0000723;Parent=NA12877_ch_T0001930;transcript_name=NA12877_ch_T0001930;gene_name=ANKRD36P1;ID=exon:NA12877_ch_T0001930:3;Name=ANKRD36P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27118792	27120244	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=NA12877_ch_T0001930;gene_id=NA12877_ch_G0000723;Parent=NA12877_ch_T0001930;transcript_name=NA12877_ch_T0001930;gene_name=ANKRD36P1;ID=intron:NA12877_ch_T0001930:3;Name=ANKRD36P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27120245	27120386	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=NA12877_ch_T0001930;gene_id=NA12877_ch_G0000723;Parent=NA12877_ch_T0001930;transcript_name=NA12877_ch_T0001930;gene_name=ANKRD36P1;ID=exon:NA12877_ch_T0001930:4;Name=ANKRD36P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	27153833	27153943	.	+	.	source_gene_common_name=ENSG00000277146;source_gene=ENSG00000277146.1;gene_id=NA12877_ch_G0000724;gene_biotype=transcribed_processed_pseudogene;gene_name=ENSG00000277146;gene_sources=liftoff;ID=NA12877_ch_G0000724;Name=ENSG00000277146
NA12877_chrY	CAT	transcript	27153833	27153943	1000	+	.	source_transcript=ENST00000619329.1;source_transcript_name=ENST00000619329;source_gene=ENSG00000277146.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000277146.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000619329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277146;transcript_id=NA12877_ch_T0001931;gene_id=NA12877_ch_G0000724;Parent=NA12877_ch_G0000724;transcript_name=NA12877_ch_T0001931;gene_name=ENSG00000277146;ID=NA12877_ch_T0001931;Name=ENSG00000277146
NA12877_chrY	CAT	exon	27153833	27153943	.	+	.	source_transcript=ENST00000619329.1;source_transcript_name=ENST00000619329;source_gene=ENSG00000277146.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000277146.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000619329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277146;transcript_id=NA12877_ch_T0001931;gene_id=NA12877_ch_G0000724;Parent=NA12877_ch_T0001931;transcript_name=NA12877_ch_T0001931;gene_name=ENSG00000277146;ID=exon:NA12877_ch_T0001931:0;Name=ENSG00000277146;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	27193446	27197404	.	+	.	source_gene_common_name=ENSG00000294758;source_gene=ENSG00000294758.1;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;gene_id=NA12877_ch_G0000725;gene_biotype=lncRNA;gene_name=ENSG00000294758;gene_sources=liftoff;ID=NA12877_ch_G0000725;Name=ENSG00000294758
NA12877_chrY	CAT	transcript	27193446	27197404	1000	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;transcript_id=NA12877_ch_T0001932;gene_id=NA12877_ch_G0000725;Parent=NA12877_ch_G0000725;transcript_name=NA12877_ch_T0001932;gene_name=ENSG00000294758;ID=NA12877_ch_T0001932;Name=ENSG00000294758
NA12877_chrY	CAT	exon	27193446	27193484	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;transcript_id=NA12877_ch_T0001932;gene_id=NA12877_ch_G0000725;Parent=NA12877_ch_T0001932;transcript_name=NA12877_ch_T0001932;gene_name=ENSG00000294758;ID=exon:NA12877_ch_T0001932:0;Name=ENSG00000294758;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27193485	27196724	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;transcript_id=NA12877_ch_T0001932;gene_id=NA12877_ch_G0000725;Parent=NA12877_ch_T0001932;transcript_name=NA12877_ch_T0001932;gene_name=ENSG00000294758;ID=intron:NA12877_ch_T0001932:0;Name=ENSG00000294758;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27196725	27196781	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;transcript_id=NA12877_ch_T0001932;gene_id=NA12877_ch_G0000725;Parent=NA12877_ch_T0001932;transcript_name=NA12877_ch_T0001932;gene_name=ENSG00000294758;ID=exon:NA12877_ch_T0001932:1;Name=ENSG00000294758;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27196782	27197140	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;transcript_id=NA12877_ch_T0001932;gene_id=NA12877_ch_G0000725;Parent=NA12877_ch_T0001932;transcript_name=NA12877_ch_T0001932;gene_name=ENSG00000294758;ID=intron:NA12877_ch_T0001932:1;Name=ENSG00000294758;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27197141	27197404	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;transcript_id=NA12877_ch_T0001932;gene_id=NA12877_ch_G0000725;Parent=NA12877_ch_T0001932;transcript_name=NA12877_ch_T0001932;gene_name=ENSG00000294758;ID=exon:NA12877_ch_T0001932:2;Name=ENSG00000294758;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	27208067	27279546	.	+	.	source_gene_common_name=TPTE2P4;source_gene=ENSG00000215506.5;gene_id=NA12877_ch_G0000726;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TPTE2P4;gene_sources=liftoff;ID=NA12877_ch_G0000726;Name=TPTE2P4
NA12877_chrY	CAT	transcript	27208067	27279546	1000	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_G0000726;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=NA12877_ch_T0001933;Name=TPTE2P4
NA12877_chrY	CAT	exon	27208067	27208120	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:0;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27208121	27214909	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:0;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27214910	27214963	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:1;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27214964	27215508	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:1;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27215509	27215562	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:2;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27215563	27225704	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:2;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27225705	27225764	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:3;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27225765	27232637	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:3;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27232638	27232688	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:4;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27232689	27234176	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:4;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27234177	27234338	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:5;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27234339	27240823	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:5;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27240824	27240943	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:6;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27240944	27242596	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:6;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27242597	27242696	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:7;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27242697	27242842	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:7;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27242843	27242905	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:8;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27242906	27243637	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:8;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27243638	27243702	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:9;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27243703	27256843	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:9;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27256844	27256908	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:10;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27256909	27257729	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:10;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27257730	27257804	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:11;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27257805	27257902	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:11;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27257903	27257991	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:12;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27257992	27264173	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:12;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27264174	27264234	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:13;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27264235	27266033	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:13;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27266034	27266115	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:14;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27266116	27269715	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:14;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27269716	27269821	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:15;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27269822	27271738	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:15;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27271739	27271818	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:16;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27271819	27275779	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:16;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27275780	27275870	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:17;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27275871	27277279	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:17;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27277280	27277350	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:18;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27277351	27279444	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=intron:NA12877_ch_T0001933:18;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27279445	27279546	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=NA12877_ch_T0001933;gene_id=NA12877_ch_G0000726;Parent=NA12877_ch_T0001933;transcript_name=NA12877_ch_T0001933;gene_name=TPTE2P4;ID=exon:NA12877_ch_T0001933:19;Name=TPTE2P4;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	27249279	27249597	.	+	.	source_gene_common_name=CYCSP49;source_gene=ENSG00000224240.1;alternative_source_transcripts=ENST00000420810.1,ENST00000420810.1;gene_id=NA12877_ch_G0000727;gene_biotype=processed_pseudogene;gene_name=CYCSP49;gene_sources=liftoff;ID=NA12877_ch_G0000727;Name=CYCSP49
NA12877_chrY	CAT	transcript	27249279	27249597	1000	+	.	source_transcript=ENST00000420810.1;source_transcript_name=CYCSP49-201;source_gene=ENSG00000224240.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224240.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420810.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP49;alternative_source_transcripts=ENST00000420810.1,ENST00000420810.1;transcript_id=NA12877_ch_T0001934;gene_id=NA12877_ch_G0000727;Parent=NA12877_ch_G0000727;transcript_name=NA12877_ch_T0001934;gene_name=CYCSP49;ID=NA12877_ch_T0001934;Name=CYCSP49
NA12877_chrY	CAT	exon	27249279	27249597	.	+	.	source_transcript=ENST00000420810.1;source_transcript_name=CYCSP49-201;source_gene=ENSG00000224240.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224240.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420810.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP49;alternative_source_transcripts=ENST00000420810.1,ENST00000420810.1;transcript_id=NA12877_ch_T0001934;gene_id=NA12877_ch_G0000727;Parent=NA12877_ch_T0001934;transcript_name=NA12877_ch_T0001934;gene_name=CYCSP49;ID=exon:NA12877_ch_T0001934:0;Name=CYCSP49;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	27286498	27291457	.	-	.	source_gene_common_name=SLC25A15P1;source_gene=ENSG00000227629.1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;gene_id=NA12877_ch_G0000728;gene_biotype=unprocessed_pseudogene;gene_name=SLC25A15P1;gene_sources=liftoff;ID=NA12877_ch_G0000728;Name=SLC25A15P1
NA12877_chrY	CAT	transcript	27286498	27291457	1000	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;transcript_id=NA12877_ch_T0001935;gene_id=NA12877_ch_G0000728;Parent=NA12877_ch_G0000728;transcript_name=NA12877_ch_T0001935;gene_name=SLC25A15P1;ID=NA12877_ch_T0001935;Name=SLC25A15P1
NA12877_chrY	CAT	exon	27286498	27286622	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;transcript_id=NA12877_ch_T0001935;gene_id=NA12877_ch_G0000728;Parent=NA12877_ch_T0001935;transcript_name=NA12877_ch_T0001935;gene_name=SLC25A15P1;ID=exon:NA12877_ch_T0001935:0;Name=SLC25A15P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27286623	27287253	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;transcript_id=NA12877_ch_T0001935;gene_id=NA12877_ch_G0000728;Parent=NA12877_ch_T0001935;transcript_name=NA12877_ch_T0001935;gene_name=SLC25A15P1;ID=intron:NA12877_ch_T0001935:0;Name=SLC25A15P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27287254	27287416	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;transcript_id=NA12877_ch_T0001935;gene_id=NA12877_ch_G0000728;Parent=NA12877_ch_T0001935;transcript_name=NA12877_ch_T0001935;gene_name=SLC25A15P1;ID=exon:NA12877_ch_T0001935:1;Name=SLC25A15P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27287417	27291403	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;transcript_id=NA12877_ch_T0001935;gene_id=NA12877_ch_G0000728;Parent=NA12877_ch_T0001935;transcript_name=NA12877_ch_T0001935;gene_name=SLC25A15P1;ID=intron:NA12877_ch_T0001935:1;Name=SLC25A15P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27291404	27291457	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;transcript_id=NA12877_ch_T0001935;gene_id=NA12877_ch_G0000728;Parent=NA12877_ch_T0001935;transcript_name=NA12877_ch_T0001935;gene_name=SLC25A15P1;ID=exon:NA12877_ch_T0001935:2;Name=SLC25A15P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	27294707	27334509	.	-	.	source_gene_common_name=PARP4P1;source_gene=ENSG00000237917.1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;gene_id=NA12877_ch_G0000729;gene_biotype=unprocessed_pseudogene;gene_name=PARP4P1;gene_sources=liftoff;ID=NA12877_ch_G0000729;Name=PARP4P1
NA12877_chrY	CAT	transcript	27294707	27334509	1000	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_G0000729;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=NA12877_ch_T0001936;Name=PARP4P1
NA12877_chrY	CAT	exon	27294707	27294901	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:0;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27294902	27300746	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=intron:NA12877_ch_T0001936:0;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27300747	27300878	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:1;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27300879	27311568	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=intron:NA12877_ch_T0001936:1;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27311569	27311663	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:2;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27311664	27314009	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=intron:NA12877_ch_T0001936:2;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27314010	27314818	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:3;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27314819	27315149	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=intron:NA12877_ch_T0001936:3;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27315150	27315387	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:4;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27315388	27321628	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=intron:NA12877_ch_T0001936:4;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27321629	27321751	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:5;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27321752	27322367	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=intron:NA12877_ch_T0001936:5;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27322368	27322464	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:6;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27322465	27323441	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=intron:NA12877_ch_T0001936:6;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27323442	27323522	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:7;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27323523	27327798	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=intron:NA12877_ch_T0001936:7;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27327799	27327878	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:8;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27327879	27328126	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=intron:NA12877_ch_T0001936:8;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27328127	27328293	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:9;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27328294	27330502	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=intron:NA12877_ch_T0001936:9;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27330503	27330605	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:10;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27330606	27333201	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=intron:NA12877_ch_T0001936:10;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27333202	27333288	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:11;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	27333289	27334379	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=intron:NA12877_ch_T0001936:11;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	27334380	27334509	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=NA12877_ch_T0001936;gene_id=NA12877_ch_G0000729;Parent=NA12877_ch_T0001936;transcript_name=NA12877_ch_T0001936;gene_name=PARP4P1;ID=exon:NA12877_ch_T0001936:12;Name=PARP4P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	27326376	27327015	.	-	.	source_gene_common_name=CCNQP2;source_gene=ENSG00000231514.1;alternative_source_transcripts=ENST00000435741.1,ENST00000435741.1;gene_id=NA12877_ch_G0000730;gene_biotype=processed_pseudogene;gene_name=CCNQP2;gene_sources=liftoff;ID=NA12877_ch_G0000730;Name=CCNQP2
NA12877_chrY	CAT	transcript	27326376	27327015	1000	-	.	source_transcript=ENST00000435741.1;source_transcript_name=CCNQP2-201;source_gene=ENSG00000231514.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231514.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435741.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CCNQP2;alternative_source_transcripts=ENST00000435741.1,ENST00000435741.1;transcript_id=NA12877_ch_T0001937;gene_id=NA12877_ch_G0000730;Parent=NA12877_ch_G0000730;transcript_name=NA12877_ch_T0001937;gene_name=CCNQP2;ID=NA12877_ch_T0001937;Name=CCNQP2
NA12877_chrY	CAT	exon	27326376	27327015	.	-	.	source_transcript=ENST00000435741.1;source_transcript_name=CCNQP2-201;source_gene=ENSG00000231514.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231514.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435741.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CCNQP2;alternative_source_transcripts=ENST00000435741.1,ENST00000435741.1;transcript_id=NA12877_ch_T0001937;gene_id=NA12877_ch_G0000730;Parent=NA12877_ch_T0001937;transcript_name=NA12877_ch_T0001937;gene_name=CCNQP2;ID=exon:NA12877_ch_T0001937:0;Name=CCNQP2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51135302	51135546	.	+	.	source_gene_common_name=CTBP2P1;source_gene=ENSG00000235857.1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;gene_id=NA12877_ch_G0000731;gene_biotype=processed_pseudogene;gene_name=CTBP2P1;gene_sources=liftoff;ID=NA12877_ch_G0000731;Name=CTBP2P1
NA12877_chrY	CAT	transcript	51135302	51135546	1000	+	.	source_transcript=ENST00000431853.1;source_transcript_name=CTBP2P1-201;source_gene=ENSG00000235857.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235857.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431853.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CTBP2P1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;transcript_id=NA12877_ch_T0001938;gene_id=NA12877_ch_G0000731;Parent=NA12877_ch_G0000731;transcript_name=NA12877_ch_T0001938;gene_name=CTBP2P1;ID=NA12877_ch_T0001938;Name=CTBP2P1
NA12877_chrY	CAT	exon	51135302	51135546	.	+	.	source_transcript=ENST00000431853.1;source_transcript_name=CTBP2P1-201;source_gene=ENSG00000235857.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235857.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431853.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CTBP2P1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;transcript_id=NA12877_ch_T0001938;gene_id=NA12877_ch_G0000731;Parent=NA12877_ch_T0001938;transcript_name=NA12877_ch_T0001938;gene_name=CTBP2P1;ID=exon:NA12877_ch_T0001938:0;Name=CTBP2P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51161906	51162172	.	+	.	source_gene_common_name=ENSG00000305394;source_gene=ENSG00000305394.1;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;gene_id=NA12877_ch_G0000732;gene_biotype=lncRNA;gene_name=ENSG00000305394;gene_sources=liftoff;ID=NA12877_ch_G0000732;Name=ENSG00000305394
NA12877_chrY	CAT	transcript	51161906	51162172	1000	+	.	source_transcript=ENST00000810723.1;source_transcript_name=ENST00000810723;source_gene=ENSG00000305394.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305394.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000810723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000810723.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305394;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;transcript_id=NA12877_ch_T0001939;gene_id=NA12877_ch_G0000732;Parent=NA12877_ch_G0000732;transcript_name=NA12877_ch_T0001939;gene_name=ENSG00000305394;ID=NA12877_ch_T0001939;Name=ENSG00000305394
NA12877_chrY	CAT	exon	51161906	51162172	.	+	.	source_transcript=ENST00000810723.1;source_transcript_name=ENST00000810723;source_gene=ENSG00000305394.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305394.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000810723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000810723.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305394;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;transcript_id=NA12877_ch_T0001939;gene_id=NA12877_ch_G0000732;Parent=NA12877_ch_T0001939;transcript_name=NA12877_ch_T0001939;gene_name=ENSG00000305394;ID=exon:NA12877_ch_T0001939:0;Name=ENSG00000305394;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51199494	51234119	.	-	.	source_gene_common_name=ENSG00000310550;source_gene=ENSG00000310550.1;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;gene_id=NA12877_ch_G0000733;gene_biotype=lncRNA;gene_name=ENSG00000310550;gene_sources=liftoff;ID=NA12877_ch_G0000733;Name=ENSG00000310550
NA12877_chrY	CAT	transcript	51199494	51234124	1000	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=NA12877_ch_T0001940;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_G0000733;transcript_name=NA12877_ch_T0001940;gene_name=ENSG00000310550;ID=NA12877_ch_T0001940;Name=ENSG00000310550
NA12877_chrY	CAT	exon	51199494	51199597	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=NA12877_ch_T0001940;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001940;transcript_name=NA12877_ch_T0001940;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001940:0;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51199598	51203803	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=NA12877_ch_T0001940;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001940;transcript_name=NA12877_ch_T0001940;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001940:0;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51203804	51203939	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=NA12877_ch_T0001940;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001940;transcript_name=NA12877_ch_T0001940;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001940:1;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51203940	51206133	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=NA12877_ch_T0001940;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001940;transcript_name=NA12877_ch_T0001940;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001940:1;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51206134	51206310	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=NA12877_ch_T0001940;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001940;transcript_name=NA12877_ch_T0001940;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001940:2;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51206311	51225082	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=NA12877_ch_T0001940;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001940;transcript_name=NA12877_ch_T0001940;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001940:2;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51225083	51225233	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=NA12877_ch_T0001940;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001940;transcript_name=NA12877_ch_T0001940;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001940:3;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51225234	51233995	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=NA12877_ch_T0001940;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001940;transcript_name=NA12877_ch_T0001940;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001940:3;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51233996	51234124	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=NA12877_ch_T0001940;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001940;transcript_name=NA12877_ch_T0001940;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001940:4;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51199501	51234119	1000	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=NA12877_ch_T0001941;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_G0000733;transcript_name=NA12877_ch_T0001941;gene_name=ENSG00000310550;ID=NA12877_ch_T0001941;Name=ENSG00000310550
NA12877_chrY	CAT	exon	51199501	51199597	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=NA12877_ch_T0001941;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001941;transcript_name=NA12877_ch_T0001941;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001941:0;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51199598	51203803	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=NA12877_ch_T0001941;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001941;transcript_name=NA12877_ch_T0001941;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001941:0;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51203804	51203939	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=NA12877_ch_T0001941;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001941;transcript_name=NA12877_ch_T0001941;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001941:1;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51203940	51206133	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=NA12877_ch_T0001941;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001941;transcript_name=NA12877_ch_T0001941;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001941:1;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51206134	51206310	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=NA12877_ch_T0001941;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001941;transcript_name=NA12877_ch_T0001941;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001941:2;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51206311	51225082	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=NA12877_ch_T0001941;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001941;transcript_name=NA12877_ch_T0001941;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001941:2;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51225083	51225233	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=NA12877_ch_T0001941;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001941;transcript_name=NA12877_ch_T0001941;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001941:3;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51225234	51234024	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=NA12877_ch_T0001941;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001941;transcript_name=NA12877_ch_T0001941;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001941:3;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51234025	51234119	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=NA12877_ch_T0001941;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001941;transcript_name=NA12877_ch_T0001941;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001941:4;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51199504	51234119	1000	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=NA12877_ch_T0001942;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_G0000733;transcript_name=NA12877_ch_T0001942;gene_name=ENSG00000310550;ID=NA12877_ch_T0001942;Name=ENSG00000310550
NA12877_chrY	CAT	exon	51199504	51199597	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=NA12877_ch_T0001942;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001942;transcript_name=NA12877_ch_T0001942;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001942:0;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51199598	51203803	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=NA12877_ch_T0001942;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001942;transcript_name=NA12877_ch_T0001942;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001942:0;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51203804	51203939	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=NA12877_ch_T0001942;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001942;transcript_name=NA12877_ch_T0001942;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001942:1;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51203940	51205970	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=NA12877_ch_T0001942;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001942;transcript_name=NA12877_ch_T0001942;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001942:1;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51205971	51206310	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=NA12877_ch_T0001942;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001942;transcript_name=NA12877_ch_T0001942;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001942:2;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51206311	51233995	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=NA12877_ch_T0001942;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001942;transcript_name=NA12877_ch_T0001942;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001942:2;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51233996	51234119	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=NA12877_ch_T0001942;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001942;transcript_name=NA12877_ch_T0001942;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001942:3;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51199504	51234065	1000	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=NA12877_ch_T0001943;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_G0000733;transcript_name=NA12877_ch_T0001943;gene_name=ENSG00000310550;ID=NA12877_ch_T0001943;Name=ENSG00000310550
NA12877_chrY	CAT	exon	51199504	51199597	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=NA12877_ch_T0001943;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001943;transcript_name=NA12877_ch_T0001943;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001943:0;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51199598	51203803	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=NA12877_ch_T0001943;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001943;transcript_name=NA12877_ch_T0001943;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001943:0;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51203804	51203939	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=NA12877_ch_T0001943;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001943;transcript_name=NA12877_ch_T0001943;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001943:1;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51203940	51206133	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=NA12877_ch_T0001943;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001943;transcript_name=NA12877_ch_T0001943;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001943:1;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51206134	51206310	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=NA12877_ch_T0001943;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001943;transcript_name=NA12877_ch_T0001943;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001943:2;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51206311	51233995	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=NA12877_ch_T0001943;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001943;transcript_name=NA12877_ch_T0001943;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001943:2;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51233996	51234065	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=NA12877_ch_T0001943;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001943;transcript_name=NA12877_ch_T0001943;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001943:3;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51233139	51234211	1000	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=NA12877_ch_T0001944;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_G0000733;transcript_name=NA12877_ch_T0001944;gene_name=ENSG00000310550;ID=NA12877_ch_T0001944;Name=ENSG00000310550
NA12877_chrY	CAT	exon	51233139	51233351	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=NA12877_ch_T0001944;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001944;transcript_name=NA12877_ch_T0001944;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001944:0;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51233352	51233666	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=NA12877_ch_T0001944;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001944;transcript_name=NA12877_ch_T0001944;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001944:0;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51233667	51233756	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=NA12877_ch_T0001944;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001944;transcript_name=NA12877_ch_T0001944;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001944:1;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51233757	51233995	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=NA12877_ch_T0001944;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001944;transcript_name=NA12877_ch_T0001944;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001944:1;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51233996	51234211	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=NA12877_ch_T0001944;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001944;transcript_name=NA12877_ch_T0001944;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001944:2;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51233149	51234096	1000	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=299.842;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=NA12877_ch_T0001945;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_G0000733;transcript_name=NA12877_ch_T0001945;gene_name=ENSG00000310550;ID=NA12877_ch_T0001945;Name=ENSG00000310550
NA12877_chrY	CAT	exon	51233149	51233351	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=299.842;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=NA12877_ch_T0001945;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001945;transcript_name=NA12877_ch_T0001945;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001945:0;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51233352	51233666	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=299.842;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=NA12877_ch_T0001945;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001945;transcript_name=NA12877_ch_T0001945;gene_name=ENSG00000310550;ID=intron:NA12877_ch_T0001945:0;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51233667	51234096	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=299.842;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=NA12877_ch_T0001945;gene_id=NA12877_ch_G0000733;Parent=NA12877_ch_T0001945;transcript_name=NA12877_ch_T0001945;gene_name=ENSG00000310550;ID=exon:NA12877_ch_T0001945:1;Name=ENSG00000310550;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51271267	51272145	.	-	.	source_gene_common_name=TRPC6P1;source_gene=ENSG00000292368.1;gene_id=NA12877_ch_G0000734;gene_biotype=processed_pseudogene;gene_name=TRPC6P1;gene_sources=liftoff;ID=NA12877_ch_G0000734;Name=TRPC6P1
NA12877_chrY	CAT	transcript	51271267	51272145	1000	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;transcript_id=NA12877_ch_T0001946;gene_id=NA12877_ch_G0000734;Parent=NA12877_ch_G0000734;transcript_name=NA12877_ch_T0001946;gene_name=TRPC6P1;ID=NA12877_ch_T0001946;Name=TRPC6P1
NA12877_chrY	CAT	exon	51271267	51272145	.	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;transcript_id=NA12877_ch_T0001946;gene_id=NA12877_ch_G0000734;Parent=NA12877_ch_T0001946;transcript_name=NA12877_ch_T0001946;gene_name=TRPC6P1;ID=exon:NA12877_ch_T0001946:0;Name=TRPC6P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51297914	51298905	.	-	.	source_gene_common_name=AMD1P2;source_gene=ENSG00000292364.1;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;gene_id=NA12877_ch_G0000735;gene_biotype=processed_pseudogene;gene_name=AMD1P2;gene_sources=liftoff;ID=NA12877_ch_G0000735;Name=AMD1P2
NA12877_chrY	CAT	transcript	51297914	51298905	1000	-	.	source_transcript=ENST00000711258.1;source_transcript_name=AMD1P2-202;source_gene=ENSG00000292364.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292364.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711258.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711258.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMD1P2;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;transcript_id=NA12877_ch_T0001947;gene_id=NA12877_ch_G0000735;Parent=NA12877_ch_G0000735;transcript_name=NA12877_ch_T0001947;gene_name=AMD1P2;ID=NA12877_ch_T0001947;Name=AMD1P2
NA12877_chrY	CAT	exon	51297914	51298905	.	-	.	source_transcript=ENST00000711258.1;source_transcript_name=AMD1P2-202;source_gene=ENSG00000292364.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292364.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711258.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711258.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMD1P2;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;transcript_id=NA12877_ch_T0001947;gene_id=NA12877_ch_G0000735;Parent=NA12877_ch_T0001947;transcript_name=NA12877_ch_T0001947;gene_name=AMD1P2;ID=exon:NA12877_ch_T0001947:0;Name=AMD1P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51345004	51345253	.	+	.	source_gene_common_name=DPH3P2;source_gene=ENSG00000292365.1;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;gene_id=NA12877_ch_G0000736;gene_biotype=processed_pseudogene;gene_name=DPH3P2;gene_sources=liftoff;ID=NA12877_ch_G0000736;Name=DPH3P2
NA12877_chrY	CAT	transcript	51345004	51345253	1000	+	.	source_transcript=ENST00000711259.1;source_transcript_name=DPH3P2-202;source_gene=ENSG00000292365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711259.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711259.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPH3P2;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;transcript_id=NA12877_ch_T0001948;gene_id=NA12877_ch_G0000736;Parent=NA12877_ch_G0000736;transcript_name=NA12877_ch_T0001948;gene_name=DPH3P2;ID=NA12877_ch_T0001948;Name=DPH3P2
NA12877_chrY	CAT	exon	51345004	51345253	.	+	.	source_transcript=ENST00000711259.1;source_transcript_name=DPH3P2-202;source_gene=ENSG00000292365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711259.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711259.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPH3P2;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;transcript_id=NA12877_ch_T0001948;gene_id=NA12877_ch_G0000736;Parent=NA12877_ch_T0001948;transcript_name=NA12877_ch_T0001948;gene_name=DPH3P2;ID=exon:NA12877_ch_T0001948:0;Name=DPH3P2;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51350713	51413146	.	+	.	source_gene_common_name=VAMP7;source_gene=ENSG00000292366.1;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;gene_id=NA12877_ch_G0000737;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff;ID=NA12877_ch_G0000737;Name=VAMP7
NA12877_chrY	CAT	transcript	51350713	51413146	100	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_G0000737;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=NA12877_ch_T0001949;Name=VAMP7
NA12877_chrY	CAT	exon	51350713	51350816	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=exon:NA12877_ch_T0001949:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51350817	51358826	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=intron:NA12877_ch_T0001949:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51358827	51358981	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=exon:NA12877_ch_T0001949:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51358836	51358981	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001949:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	51358836	51358838	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=start_codon:NA12877_ch_T0001949;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51358982	51364991	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=intron:NA12877_ch_T0001949:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51364992	51365049	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=exon:NA12877_ch_T0001949:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51364992	51365049	.	+	1	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001949:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51365050	51367480	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=intron:NA12877_ch_T0001949:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51367481	51367618	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=exon:NA12877_ch_T0001949:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51367481	51367618	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001949:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51367619	51369865	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=intron:NA12877_ch_T0001949:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51369866	51369956	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=exon:NA12877_ch_T0001949:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51369866	51369956	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001949:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51369957	51389184	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=intron:NA12877_ch_T0001949:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51389185	51389252	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=exon:NA12877_ch_T0001949:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51389185	51389252	.	+	2	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001949:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51389253	51409078	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=intron:NA12877_ch_T0001949:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51409079	51409171	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=exon:NA12877_ch_T0001949:6;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51409079	51409171	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001949:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51409172	51411259	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=intron:NA12877_ch_T0001949:6;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51411260	51413146	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=exon:NA12877_ch_T0001949:7;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51411260	51411328	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001949:6;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	51411326	51411328	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=NA12877_ch_T0001949;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001949;transcript_name=NA12877_ch_T0001949;gene_name=VAMP7;ID=stop_codon:NA12877_ch_T0001949;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51350726	51411286	1000	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_G0000737;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=NA12877_ch_T0001950;Name=VAMP7
NA12877_chrY	CAT	exon	51350726	51350816	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=exon:NA12877_ch_T0001950:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51350817	51358826	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=intron:NA12877_ch_T0001950:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51358827	51359002	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=exon:NA12877_ch_T0001950:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51359003	51364991	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=intron:NA12877_ch_T0001950:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51364992	51365049	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=exon:NA12877_ch_T0001950:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51365050	51367480	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=intron:NA12877_ch_T0001950:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51367481	51367618	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=exon:NA12877_ch_T0001950:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51367619	51369865	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=intron:NA12877_ch_T0001950:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51369866	51369956	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=exon:NA12877_ch_T0001950:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51369957	51389184	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=intron:NA12877_ch_T0001950:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51389185	51389252	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=exon:NA12877_ch_T0001950:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51389253	51409078	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=intron:NA12877_ch_T0001950:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51409079	51409171	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=exon:NA12877_ch_T0001950:6;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51409172	51411259	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=intron:NA12877_ch_T0001950:6;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51411260	51411286	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=NA12877_ch_T0001950;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001950;transcript_name=NA12877_ch_T0001950;gene_name=VAMP7;ID=exon:NA12877_ch_T0001950:7;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51350728	51411321	1000	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_G0000737;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=NA12877_ch_T0001951;Name=VAMP7
NA12877_chrY	CAT	exon	51350728	51350816	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=exon:NA12877_ch_T0001951:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51350817	51358826	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=intron:NA12877_ch_T0001951:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51358827	51358981	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=exon:NA12877_ch_T0001951:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51358836	51358981	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001951:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	51358836	51358838	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=start_codon:NA12877_ch_T0001951;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51358982	51367480	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=intron:NA12877_ch_T0001951:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51367481	51367618	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=exon:NA12877_ch_T0001951:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51367481	51367514	.	+	1	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001951:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	51367512	51367514	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=stop_codon:NA12877_ch_T0001951;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51367619	51369865	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=intron:NA12877_ch_T0001951:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51369866	51369956	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=exon:NA12877_ch_T0001951:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51369957	51389184	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=intron:NA12877_ch_T0001951:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51389185	51389252	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=exon:NA12877_ch_T0001951:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51389253	51409078	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=intron:NA12877_ch_T0001951:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51409079	51409171	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=exon:NA12877_ch_T0001951:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51409172	51411259	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=intron:NA12877_ch_T0001951:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51411260	51411321	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=NA12877_ch_T0001951;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001951;transcript_name=NA12877_ch_T0001951;gene_name=VAMP7;ID=exon:NA12877_ch_T0001951:6;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51350740	51409168	1000	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_G0000737;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=NA12877_ch_T0001952;Name=VAMP7
NA12877_chrY	CAT	exon	51350740	51350816	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=exon:NA12877_ch_T0001952:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51350817	51358826	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=intron:NA12877_ch_T0001952:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51358827	51358977	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=exon:NA12877_ch_T0001952:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51358978	51364991	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=intron:NA12877_ch_T0001952:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51364992	51365049	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=exon:NA12877_ch_T0001952:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51365050	51367480	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=intron:NA12877_ch_T0001952:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51367481	51367618	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=exon:NA12877_ch_T0001952:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51367619	51369865	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=intron:NA12877_ch_T0001952:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51369866	51369956	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=exon:NA12877_ch_T0001952:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51369957	51389184	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=intron:NA12877_ch_T0001952:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51389185	51389252	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=exon:NA12877_ch_T0001952:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51389253	51409078	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=intron:NA12877_ch_T0001952:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51409079	51409168	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=NA12877_ch_T0001952;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001952;transcript_name=NA12877_ch_T0001952;gene_name=VAMP7;ID=exon:NA12877_ch_T0001952:6;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51350743	51413146	100	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_G0000737;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=NA12877_ch_T0001953;Name=VAMP7
NA12877_chrY	CAT	exon	51350743	51350816	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=exon:NA12877_ch_T0001953:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51350817	51358826	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=intron:NA12877_ch_T0001953:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51358827	51358981	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=exon:NA12877_ch_T0001953:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51358836	51358981	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001953:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	51358836	51358838	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=start_codon:NA12877_ch_T0001953;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51358982	51364991	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=intron:NA12877_ch_T0001953:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51364992	51365049	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=exon:NA12877_ch_T0001953:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51364992	51365049	.	+	1	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001953:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51365050	51367480	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=intron:NA12877_ch_T0001953:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51367481	51367618	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=exon:NA12877_ch_T0001953:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51367481	51367618	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001953:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51367619	51369865	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=intron:NA12877_ch_T0001953:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51369866	51369956	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=exon:NA12877_ch_T0001953:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51369866	51369956	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001953:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51369957	51409078	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=intron:NA12877_ch_T0001953:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51409079	51409171	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=exon:NA12877_ch_T0001953:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51409079	51409171	.	+	2	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001953:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51409172	51411259	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=intron:NA12877_ch_T0001953:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51411260	51413146	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=exon:NA12877_ch_T0001953:6;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51411260	51411516	.	+	2	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001953:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	51411514	51411516	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=NA12877_ch_T0001953;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001953;transcript_name=NA12877_ch_T0001953;gene_name=VAMP7;ID=stop_codon:NA12877_ch_T0001953;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51350746	51411366	100	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_G0000737;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=NA12877_ch_T0001954;Name=VAMP7
NA12877_chrY	CAT	exon	51350746	51350816	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=exon:NA12877_ch_T0001954:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51350817	51358826	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=intron:NA12877_ch_T0001954:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51358827	51358916	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=exon:NA12877_ch_T0001954:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51358836	51358916	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001954:0;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	51358836	51358838	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=start_codon:NA12877_ch_T0001954;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51358917	51367480	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=intron:NA12877_ch_T0001954:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51367481	51367618	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=exon:NA12877_ch_T0001954:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51367481	51367618	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001954:1;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51367619	51369865	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=intron:NA12877_ch_T0001954:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51369866	51369956	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=exon:NA12877_ch_T0001954:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51369866	51369956	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001954:2;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51369957	51389184	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=intron:NA12877_ch_T0001954:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51389185	51389252	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=exon:NA12877_ch_T0001954:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51389185	51389252	.	+	2	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001954:3;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51389253	51409078	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=intron:NA12877_ch_T0001954:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51409079	51409171	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=exon:NA12877_ch_T0001954:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51409079	51409171	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001954:4;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51409172	51411259	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=intron:NA12877_ch_T0001954:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51411260	51411366	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=exon:NA12877_ch_T0001954:6;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51411260	51411328	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=CDS:NA12877_ch_T0001954:5;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	51411326	51411328	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=NA12877_ch_T0001954;gene_id=NA12877_ch_G0000737;Parent=NA12877_ch_T0001954;transcript_name=NA12877_ch_T0001954;gene_name=VAMP7;ID=stop_codon:NA12877_ch_T0001954;Name=VAMP7;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51421496	51428704	.	-	.	source_gene_common_name=ENSG00000310555;source_gene=ENSG00000310555.1;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;gene_id=NA12877_ch_G0000738;gene_biotype=lncRNA;gene_name=ENSG00000310555;gene_sources=liftoff;ID=NA12877_ch_G0000738;Name=ENSG00000310555
NA12877_chrY	CAT	transcript	51421496	51428704	1000	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=298.678;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=NA12877_ch_T0001955;gene_id=NA12877_ch_G0000738;Parent=NA12877_ch_G0000738;transcript_name=NA12877_ch_T0001955;gene_name=ENSG00000310555;ID=NA12877_ch_T0001955;Name=ENSG00000310555
NA12877_chrY	CAT	exon	51421496	51421779	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=298.678;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=NA12877_ch_T0001955;gene_id=NA12877_ch_G0000738;Parent=NA12877_ch_T0001955;transcript_name=NA12877_ch_T0001955;gene_name=ENSG00000310555;ID=exon:NA12877_ch_T0001955:0;Name=ENSG00000310555;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51421780	51428533	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=298.678;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=NA12877_ch_T0001955;gene_id=NA12877_ch_G0000738;Parent=NA12877_ch_T0001955;transcript_name=NA12877_ch_T0001955;gene_name=ENSG00000310555;ID=intron:NA12877_ch_T0001955:0;Name=ENSG00000310555;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51428534	51428704	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=298.678;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=NA12877_ch_T0001955;gene_id=NA12877_ch_G0000738;Parent=NA12877_ch_T0001955;transcript_name=NA12877_ch_T0001955;gene_name=ENSG00000310555;ID=exon:NA12877_ch_T0001955:1;Name=ENSG00000310555;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51448376	51448709	.	-	.	source_gene_common_name=ELOCP24;source_gene=ENSG00000292367.1;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;gene_id=NA12877_ch_G0000739;gene_biotype=processed_pseudogene;gene_name=ELOCP24;gene_sources=liftoff;ID=NA12877_ch_G0000739;Name=ELOCP24
NA12877_chrY	CAT	transcript	51448376	51448709	1000	-	.	source_transcript=ENST00000711266.1;source_transcript_name=ELOCP24-202;source_gene=ENSG00000292367.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292367.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711266.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711266.1;transcript_score=199.701;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP24;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;transcript_id=NA12877_ch_T0001956;gene_id=NA12877_ch_G0000739;Parent=NA12877_ch_G0000739;transcript_name=NA12877_ch_T0001956;gene_name=ELOCP24;ID=NA12877_ch_T0001956;Name=ELOCP24
NA12877_chrY	CAT	exon	51448376	51448709	.	-	.	source_transcript=ENST00000711266.1;source_transcript_name=ELOCP24-202;source_gene=ENSG00000292367.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292367.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711266.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711266.1;transcript_score=199.701;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP24;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;transcript_id=NA12877_ch_T0001956;gene_id=NA12877_ch_G0000739;Parent=NA12877_ch_T0001956;transcript_name=NA12877_ch_T0001956;gene_name=ELOCP24;ID=exon:NA12877_ch_T0001956:0;Name=ELOCP24;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51454751	51455629	.	-	.	source_gene_common_name=TRPC6P1;source_gene=ENSG00000292368.1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;gene_id=NA12877_ch_G0000740;gene_biotype=processed_pseudogene;gene_name=TRPC6P1;gene_sources=liftoff;ID=NA12877_ch_G0000740;Name=TRPC6P1
NA12877_chrY	CAT	transcript	51454751	51455629	1000	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=199.772;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;transcript_id=NA12877_ch_T0001957;gene_id=NA12877_ch_G0000740;Parent=NA12877_ch_G0000740;transcript_name=NA12877_ch_T0001957;gene_name=TRPC6P1;ID=NA12877_ch_T0001957;Name=TRPC6P1
NA12877_chrY	CAT	exon	51454751	51455629	.	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=199.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;transcript_id=NA12877_ch_T0001957;gene_id=NA12877_ch_G0000740;Parent=NA12877_ch_T0001957;transcript_name=NA12877_ch_T0001957;gene_name=TRPC6P1;ID=exon:NA12877_ch_T0001957:0;Name=TRPC6P1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51467077	51482397	.	+	.	source_gene_common_name=IL9R;source_gene=ENSG00000292373.2;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;gene_id=NA12877_ch_G0000741;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff;ID=NA12877_ch_G0000741;Name=IL9R
NA12877_chrY	CAT	transcript	51467077	51480197	100	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_G0000741;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=NA12877_ch_T0001958;Name=IL9R
NA12877_chrY	CAT	exon	51467077	51467168	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=exon:NA12877_ch_T0001958:0;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51467141	51467168	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=CDS:NA12877_ch_T0001958:0;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	51467141	51467143	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=start_codon:NA12877_ch_T0001958;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51467169	51472290	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=intron:NA12877_ch_T0001958:0;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51472291	51472404	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=exon:NA12877_ch_T0001958:1;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51472291	51472404	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=CDS:NA12877_ch_T0001958:1;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51472405	51472833	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=intron:NA12877_ch_T0001958:1;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51472834	51472945	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=exon:NA12877_ch_T0001958:2;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51472834	51472945	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=CDS:NA12877_ch_T0001958:2;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51472946	51473061	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=intron:NA12877_ch_T0001958:2;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51473062	51473240	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=exon:NA12877_ch_T0001958:3;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51473062	51473240	.	+	1	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=CDS:NA12877_ch_T0001958:3;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51473241	51473804	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=intron:NA12877_ch_T0001958:3;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51473805	51473950	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=exon:NA12877_ch_T0001958:4;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51473805	51473950	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=CDS:NA12877_ch_T0001958:4;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51473951	51474662	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=intron:NA12877_ch_T0001958:4;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51474663	51474864	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=exon:NA12877_ch_T0001958:5;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51474663	51474864	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=CDS:NA12877_ch_T0001958:5;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51474865	51475467	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=intron:NA12877_ch_T0001958:5;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51475468	51475573	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=exon:NA12877_ch_T0001958:6;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51475468	51475573	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=CDS:NA12877_ch_T0001958:6;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51475574	51476908	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=intron:NA12877_ch_T0001958:6;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51476909	51476993	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=exon:NA12877_ch_T0001958:7;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51476909	51476993	.	+	1	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=CDS:NA12877_ch_T0001958:7;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51476994	51479195	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=intron:NA12877_ch_T0001958:7;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51479196	51480197	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=exon:NA12877_ch_T0001958:8;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51479196	51479789	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=CDS:NA12877_ch_T0001958:8;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	51479787	51479789	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=NA12877_ch_T0001958;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001958;transcript_name=NA12877_ch_T0001958;gene_name=IL9R;ID=stop_codon:NA12877_ch_T0001958;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51467087	51482397	100	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_G0000741;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=NA12877_ch_T0001959;Name=IL9R
NA12877_chrY	CAT	exon	51467087	51467168	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=exon:NA12877_ch_T0001959:0;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51467125	51467168	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=CDS:NA12877_ch_T0001959:0;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	51467125	51467127	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=start_codon:NA12877_ch_T0001959;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51467169	51470788	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=intron:NA12877_ch_T0001959:0;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51470789	51470889	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=exon:NA12877_ch_T0001959:1;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51470789	51470889	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=CDS:NA12877_ch_T0001959:1;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51470890	51472266	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=intron:NA12877_ch_T0001959:1;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51472267	51472404	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=exon:NA12877_ch_T0001959:2;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51472267	51472404	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=CDS:NA12877_ch_T0001959:2;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51472405	51472833	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=intron:NA12877_ch_T0001959:2;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51472834	51472945	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=exon:NA12877_ch_T0001959:3;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51472834	51472945	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=CDS:NA12877_ch_T0001959:3;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51472946	51473068	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=intron:NA12877_ch_T0001959:3;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51473069	51473240	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=exon:NA12877_ch_T0001959:4;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51473069	51473240	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=CDS:NA12877_ch_T0001959:4;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51473241	51473833	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=intron:NA12877_ch_T0001959:4;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51473834	51473950	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=exon:NA12877_ch_T0001959:5;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51473834	51473950	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=CDS:NA12877_ch_T0001959:5;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51473951	51474662	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=intron:NA12877_ch_T0001959:5;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51474663	51474864	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=exon:NA12877_ch_T0001959:6;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51474663	51474864	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=CDS:NA12877_ch_T0001959:6;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51474865	51475467	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=intron:NA12877_ch_T0001959:6;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51475468	51475573	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=exon:NA12877_ch_T0001959:7;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51475468	51475573	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=CDS:NA12877_ch_T0001959:7;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51475574	51479195	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=intron:NA12877_ch_T0001959:7;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51479196	51482397	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=exon:NA12877_ch_T0001959:8;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51479196	51479232	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=CDS:NA12877_ch_T0001959:8;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	51479230	51479232	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=NA12877_ch_T0001959;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001959;transcript_name=NA12877_ch_T0001959;gene_name=IL9R;ID=stop_codon:NA12877_ch_T0001959;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51467115	51472355	1000	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=NA12877_ch_T0001960;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_G0000741;transcript_name=NA12877_ch_T0001960;gene_name=IL9R;ID=NA12877_ch_T0001960;Name=IL9R
NA12877_chrY	CAT	exon	51467115	51467168	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=NA12877_ch_T0001960;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001960;transcript_name=NA12877_ch_T0001960;gene_name=IL9R;ID=exon:NA12877_ch_T0001960:0;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51467169	51470710	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=NA12877_ch_T0001960;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001960;transcript_name=NA12877_ch_T0001960;gene_name=IL9R;ID=intron:NA12877_ch_T0001960:0;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51470711	51470889	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=NA12877_ch_T0001960;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001960;transcript_name=NA12877_ch_T0001960;gene_name=IL9R;ID=exon:NA12877_ch_T0001960:1;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51470890	51472290	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=NA12877_ch_T0001960;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001960;transcript_name=NA12877_ch_T0001960;gene_name=IL9R;ID=intron:NA12877_ch_T0001960:1;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51472291	51472355	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=NA12877_ch_T0001960;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001960;transcript_name=NA12877_ch_T0001960;gene_name=IL9R;ID=exon:NA12877_ch_T0001960:2;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51475499	51477431	1000	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=NA12877_ch_T0001962;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_G0000741;transcript_name=NA12877_ch_T0001962;gene_name=IL9R;ID=NA12877_ch_T0001962;Name=IL9R
NA12877_chrY	CAT	exon	51475499	51475573	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=NA12877_ch_T0001962;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001962;transcript_name=NA12877_ch_T0001962;gene_name=IL9R;ID=exon:NA12877_ch_T0001962:0;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51475574	51476908	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=NA12877_ch_T0001962;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001962;transcript_name=NA12877_ch_T0001962;gene_name=IL9R;ID=intron:NA12877_ch_T0001962:0;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51476909	51476993	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=NA12877_ch_T0001962;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001962;transcript_name=NA12877_ch_T0001962;gene_name=IL9R;ID=exon:NA12877_ch_T0001962:1;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51476994	51477283	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=NA12877_ch_T0001962;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001962;transcript_name=NA12877_ch_T0001962;gene_name=IL9R;ID=intron:NA12877_ch_T0001962:1;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51477284	51477431	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=NA12877_ch_T0001962;gene_id=NA12877_ch_G0000741;Parent=NA12877_ch_T0001962;transcript_name=NA12877_ch_T0001962;gene_name=IL9R;ID=exon:NA12877_ch_T0001962:2;Name=IL9R;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51473603	51476993	.	+	.	source_gene_common_name=ENSG00000292369;source_gene=ENSG00000292369.1;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;gene_id=NA12877_ch_G0000742;gene_biotype=lncRNA;gene_name=ENSG00000292369;gene_sources=liftoff;ID=NA12877_ch_G0000742;Name=ENSG00000292369
NA12877_chrY	CAT	transcript	51473603	51476993	1000	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=NA12877_ch_T0001961;gene_id=NA12877_ch_G0000742;Parent=NA12877_ch_G0000742;transcript_name=NA12877_ch_T0001961;gene_name=ENSG00000292369;ID=NA12877_ch_T0001961;Name=ENSG00000292369
NA12877_chrY	CAT	exon	51473603	51473950	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=NA12877_ch_T0001961;gene_id=NA12877_ch_G0000742;Parent=NA12877_ch_T0001961;transcript_name=NA12877_ch_T0001961;gene_name=ENSG00000292369;ID=exon:NA12877_ch_T0001961:0;Name=ENSG00000292369;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51473951	51476908	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=NA12877_ch_T0001961;gene_id=NA12877_ch_G0000742;Parent=NA12877_ch_T0001961;transcript_name=NA12877_ch_T0001961;gene_name=ENSG00000292369;ID=intron:NA12877_ch_T0001961:0;Name=ENSG00000292369;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51476909	51476993	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=NA12877_ch_T0001961;gene_id=NA12877_ch_G0000742;Parent=NA12877_ch_T0001961;transcript_name=NA12877_ch_T0001961;gene_name=ENSG00000292369;ID=exon:NA12877_ch_T0001961:1;Name=ENSG00000292369;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51483997	51486270	.	-	.	source_gene_common_name=WASIR1;source_gene=ENSG00000292370.2;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;gene_id=NA12877_ch_G0000743;gene_biotype=lncRNA;gene_name=WASIR1;gene_sources=liftoff;ID=NA12877_ch_G0000743;Name=WASIR1
NA12877_chrY	CAT	transcript	51483997	51486263	1000	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=NA12877_ch_T0001963;gene_id=NA12877_ch_G0000743;Parent=NA12877_ch_G0000743;transcript_name=NA12877_ch_T0001963;gene_name=WASIR1;ID=NA12877_ch_T0001963;Name=WASIR1
NA12877_chrY	CAT	exon	51483997	51485007	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=NA12877_ch_T0001963;gene_id=NA12877_ch_G0000743;Parent=NA12877_ch_T0001963;transcript_name=NA12877_ch_T0001963;gene_name=WASIR1;ID=exon:NA12877_ch_T0001963:0;Name=WASIR1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51485008	51486046	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=NA12877_ch_T0001963;gene_id=NA12877_ch_G0000743;Parent=NA12877_ch_T0001963;transcript_name=NA12877_ch_T0001963;gene_name=WASIR1;ID=intron:NA12877_ch_T0001963:0;Name=WASIR1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51486047	51486263	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=NA12877_ch_T0001963;gene_id=NA12877_ch_G0000743;Parent=NA12877_ch_T0001963;transcript_name=NA12877_ch_T0001963;gene_name=WASIR1;ID=exon:NA12877_ch_T0001963:1;Name=WASIR1;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51483997	51486270	1000	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=NA12877_ch_T0001964;gene_id=NA12877_ch_G0000743;Parent=NA12877_ch_G0000743;transcript_name=NA12877_ch_T0001964;gene_name=WASIR1;ID=NA12877_ch_T0001964;Name=WASIR1
NA12877_chrY	CAT	exon	51483997	51484882	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=NA12877_ch_T0001964;gene_id=NA12877_ch_G0000743;Parent=NA12877_ch_T0001964;transcript_name=NA12877_ch_T0001964;gene_name=WASIR1;ID=exon:NA12877_ch_T0001964:0;Name=WASIR1;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51484883	51486046	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=NA12877_ch_T0001964;gene_id=NA12877_ch_G0000743;Parent=NA12877_ch_T0001964;transcript_name=NA12877_ch_T0001964;gene_name=WASIR1;ID=intron:NA12877_ch_T0001964:0;Name=WASIR1;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51486047	51486270	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=NA12877_ch_T0001964;gene_id=NA12877_ch_G0000743;Parent=NA12877_ch_T0001964;transcript_name=NA12877_ch_T0001964;gene_name=WASIR1;ID=exon:NA12877_ch_T0001964:1;Name=WASIR1;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51490195	51493829	.	+	.	source_gene_common_name=WASH6P;source_gene=ENSG00000292372.1;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;gene_id=NA12877_ch_G0000744;gene_biotype=protein_coding;gene_name=WASH6P;gene_sources=liftoff;ID=NA12877_ch_G0000744;Name=WASH6P
NA12877_chrY	CAT	transcript	51490195	51490933	1000	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.655;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=NA12877_ch_T0001965;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001965;gene_name=WASH6P;ID=NA12877_ch_T0001965;Name=WASH6P
NA12877_chrY	CAT	exon	51490195	51490517	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.655;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=NA12877_ch_T0001965;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001965;transcript_name=NA12877_ch_T0001965;gene_name=WASH6P;ID=exon:NA12877_ch_T0001965:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51490518	51490875	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.655;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=NA12877_ch_T0001965;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001965;transcript_name=NA12877_ch_T0001965;gene_name=WASH6P;ID=intron:NA12877_ch_T0001965:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51490876	51490933	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.655;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=NA12877_ch_T0001965;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001965;transcript_name=NA12877_ch_T0001965;gene_name=WASH6P;ID=exon:NA12877_ch_T0001965:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51490330	51493493	100	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=NA12877_ch_T0001966;Name=WASH6P
NA12877_chrY	CAT	exon	51490330	51490517	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=exon:NA12877_ch_T0001966:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51490330	51490517	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=CDS:NA12877_ch_T0001966:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	start_codon	51490330	51490332	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=start_codon:NA12877_ch_T0001966;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51490518	51490948	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=intron:NA12877_ch_T0001966:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51490949	51490953	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=exon:NA12877_ch_T0001966:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51490949	51490953	.	+	1	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=CDS:NA12877_ch_T0001966:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51490954	51491130	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=intron:NA12877_ch_T0001966:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491131	51491332	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=exon:NA12877_ch_T0001966:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51491131	51491332	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=CDS:NA12877_ch_T0001966:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491333	51491420	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=intron:NA12877_ch_T0001966:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491421	51491579	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=exon:NA12877_ch_T0001966:3;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51491421	51491579	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=CDS:NA12877_ch_T0001966:3;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491580	51492238	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=intron:NA12877_ch_T0001966:3;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51492239	51492391	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=exon:NA12877_ch_T0001966:4;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51492239	51492391	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=CDS:NA12877_ch_T0001966:4;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51492392	51493150	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=intron:NA12877_ch_T0001966:4;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51493151	51493219	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=exon:NA12877_ch_T0001966:5;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51493151	51493219	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=CDS:NA12877_ch_T0001966:5;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51493220	51493359	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=intron:NA12877_ch_T0001966:5;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51493360	51493493	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=exon:NA12877_ch_T0001966:6;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	CDS	51493360	51493493	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=CDS:NA12877_ch_T0001966:6;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	stop_codon	51493491	51493493	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001966;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001966;transcript_name=NA12877_ch_T0001966;gene_name=WASH6P;ID=stop_codon:NA12877_ch_T0001966;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51490697	51493782	1000	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.787;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=NA12877_ch_T0001967;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001967;gene_name=WASH6P;ID=NA12877_ch_T0001967;Name=WASH6P
NA12877_chrY	CAT	exon	51490697	51491328	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.787;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=NA12877_ch_T0001967;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001967;transcript_name=NA12877_ch_T0001967;gene_name=WASH6P;ID=exon:NA12877_ch_T0001967:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491329	51491420	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.787;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=NA12877_ch_T0001967;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001967;transcript_name=NA12877_ch_T0001967;gene_name=WASH6P;ID=intron:NA12877_ch_T0001967:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491421	51493782	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.787;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=NA12877_ch_T0001967;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001967;transcript_name=NA12877_ch_T0001967;gene_name=WASH6P;ID=exon:NA12877_ch_T0001967:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51490815	51491326	1000	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001968;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001968;gene_name=WASH6P;ID=NA12877_ch_T0001968;Name=WASH6P
NA12877_chrY	CAT	exon	51490815	51490948	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001968;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001968;transcript_name=NA12877_ch_T0001968;gene_name=WASH6P;ID=exon:NA12877_ch_T0001968:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51490949	51491130	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001968;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001968;transcript_name=NA12877_ch_T0001968;gene_name=WASH6P;ID=intron:NA12877_ch_T0001968:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491131	51491326	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001968;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001968;transcript_name=NA12877_ch_T0001968;gene_name=WASH6P;ID=exon:NA12877_ch_T0001968:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51490949	51493785	1000	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=NA12877_ch_T0001969;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001969;gene_name=WASH6P;ID=NA12877_ch_T0001969;Name=WASH6P
NA12877_chrY	CAT	exon	51490949	51490953	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=NA12877_ch_T0001969;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001969;transcript_name=NA12877_ch_T0001969;gene_name=WASH6P;ID=exon:NA12877_ch_T0001969:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51490954	51491130	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=NA12877_ch_T0001969;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001969;transcript_name=NA12877_ch_T0001969;gene_name=WASH6P;ID=intron:NA12877_ch_T0001969:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491131	51491328	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=NA12877_ch_T0001969;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001969;transcript_name=NA12877_ch_T0001969;gene_name=WASH6P;ID=exon:NA12877_ch_T0001969:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491329	51491420	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=NA12877_ch_T0001969;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001969;transcript_name=NA12877_ch_T0001969;gene_name=WASH6P;ID=intron:NA12877_ch_T0001969:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491421	51491579	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=NA12877_ch_T0001969;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001969;transcript_name=NA12877_ch_T0001969;gene_name=WASH6P;ID=exon:NA12877_ch_T0001969:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491580	51492238	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=NA12877_ch_T0001969;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001969;transcript_name=NA12877_ch_T0001969;gene_name=WASH6P;ID=intron:NA12877_ch_T0001969:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51492239	51492391	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=NA12877_ch_T0001969;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001969;transcript_name=NA12877_ch_T0001969;gene_name=WASH6P;ID=exon:NA12877_ch_T0001969:3;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51492392	51493150	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=NA12877_ch_T0001969;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001969;transcript_name=NA12877_ch_T0001969;gene_name=WASH6P;ID=intron:NA12877_ch_T0001969:3;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51493151	51493219	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=NA12877_ch_T0001969;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001969;transcript_name=NA12877_ch_T0001969;gene_name=WASH6P;ID=exon:NA12877_ch_T0001969:4;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51493220	51493359	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=NA12877_ch_T0001969;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001969;transcript_name=NA12877_ch_T0001969;gene_name=WASH6P;ID=intron:NA12877_ch_T0001969:4;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51493360	51493785	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=NA12877_ch_T0001969;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001969;transcript_name=NA12877_ch_T0001969;gene_name=WASH6P;ID=exon:NA12877_ch_T0001969:5;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51490949	51493785	1000	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=NA12877_ch_T0001970;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001970;gene_name=WASH6P;ID=NA12877_ch_T0001970;Name=WASH6P
NA12877_chrY	CAT	exon	51490949	51490953	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=NA12877_ch_T0001970;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001970;transcript_name=NA12877_ch_T0001970;gene_name=WASH6P;ID=exon:NA12877_ch_T0001970:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51490954	51491130	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=NA12877_ch_T0001970;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001970;transcript_name=NA12877_ch_T0001970;gene_name=WASH6P;ID=intron:NA12877_ch_T0001970:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491131	51491328	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=NA12877_ch_T0001970;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001970;transcript_name=NA12877_ch_T0001970;gene_name=WASH6P;ID=exon:NA12877_ch_T0001970:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491329	51491420	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=NA12877_ch_T0001970;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001970;transcript_name=NA12877_ch_T0001970;gene_name=WASH6P;ID=intron:NA12877_ch_T0001970:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491421	51493219	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=NA12877_ch_T0001970;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001970;transcript_name=NA12877_ch_T0001970;gene_name=WASH6P;ID=exon:NA12877_ch_T0001970:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51493220	51493359	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=NA12877_ch_T0001970;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001970;transcript_name=NA12877_ch_T0001970;gene_name=WASH6P;ID=intron:NA12877_ch_T0001970:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51493360	51493785	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=NA12877_ch_T0001970;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001970;transcript_name=NA12877_ch_T0001970;gene_name=WASH6P;ID=exon:NA12877_ch_T0001970:3;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51490949	51493829	1000	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=NA12877_ch_T0001971;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001971;gene_name=WASH6P;ID=NA12877_ch_T0001971;Name=WASH6P
NA12877_chrY	CAT	exon	51490949	51490953	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=NA12877_ch_T0001971;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001971;transcript_name=NA12877_ch_T0001971;gene_name=WASH6P;ID=exon:NA12877_ch_T0001971:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51490954	51491130	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=NA12877_ch_T0001971;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001971;transcript_name=NA12877_ch_T0001971;gene_name=WASH6P;ID=intron:NA12877_ch_T0001971:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491131	51491332	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=NA12877_ch_T0001971;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001971;transcript_name=NA12877_ch_T0001971;gene_name=WASH6P;ID=exon:NA12877_ch_T0001971:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491333	51491420	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=NA12877_ch_T0001971;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001971;transcript_name=NA12877_ch_T0001971;gene_name=WASH6P;ID=intron:NA12877_ch_T0001971:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491421	51491579	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=NA12877_ch_T0001971;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001971;transcript_name=NA12877_ch_T0001971;gene_name=WASH6P;ID=exon:NA12877_ch_T0001971:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491580	51492238	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=NA12877_ch_T0001971;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001971;transcript_name=NA12877_ch_T0001971;gene_name=WASH6P;ID=intron:NA12877_ch_T0001971:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51492239	51492391	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=NA12877_ch_T0001971;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001971;transcript_name=NA12877_ch_T0001971;gene_name=WASH6P;ID=exon:NA12877_ch_T0001971:3;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51492392	51493150	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=NA12877_ch_T0001971;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001971;transcript_name=NA12877_ch_T0001971;gene_name=WASH6P;ID=intron:NA12877_ch_T0001971:3;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51493151	51493219	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=NA12877_ch_T0001971;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001971;transcript_name=NA12877_ch_T0001971;gene_name=WASH6P;ID=exon:NA12877_ch_T0001971:4;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51493220	51493359	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=NA12877_ch_T0001971;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001971;transcript_name=NA12877_ch_T0001971;gene_name=WASH6P;ID=intron:NA12877_ch_T0001971:4;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51493360	51493829	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=NA12877_ch_T0001971;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001971;transcript_name=NA12877_ch_T0001971;gene_name=WASH6P;ID=exon:NA12877_ch_T0001971:5;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51490949	51493782	1000	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.68399999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=NA12877_ch_T0001972;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001972;gene_name=WASH6P;ID=NA12877_ch_T0001972;Name=WASH6P
NA12877_chrY	CAT	exon	51490949	51490953	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.68399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=NA12877_ch_T0001972;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001972;transcript_name=NA12877_ch_T0001972;gene_name=WASH6P;ID=exon:NA12877_ch_T0001972:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51490954	51491130	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.68399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=NA12877_ch_T0001972;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001972;transcript_name=NA12877_ch_T0001972;gene_name=WASH6P;ID=intron:NA12877_ch_T0001972:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491131	51491328	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.68399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=NA12877_ch_T0001972;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001972;transcript_name=NA12877_ch_T0001972;gene_name=WASH6P;ID=exon:NA12877_ch_T0001972:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491329	51491420	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.68399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=NA12877_ch_T0001972;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001972;transcript_name=NA12877_ch_T0001972;gene_name=WASH6P;ID=intron:NA12877_ch_T0001972:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491421	51493782	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.68399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=NA12877_ch_T0001972;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001972;transcript_name=NA12877_ch_T0001972;gene_name=WASH6P;ID=exon:NA12877_ch_T0001972:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51490949	51491650	1000	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.499;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=NA12877_ch_T0001973;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001973;gene_name=WASH6P;ID=NA12877_ch_T0001973;Name=WASH6P
NA12877_chrY	CAT	exon	51490949	51491332	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.499;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=NA12877_ch_T0001973;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001973;transcript_name=NA12877_ch_T0001973;gene_name=WASH6P;ID=exon:NA12877_ch_T0001973:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491333	51491420	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.499;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=NA12877_ch_T0001973;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001973;transcript_name=NA12877_ch_T0001973;gene_name=WASH6P;ID=intron:NA12877_ch_T0001973:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491421	51491650	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.499;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=NA12877_ch_T0001973;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001973;transcript_name=NA12877_ch_T0001973;gene_name=WASH6P;ID=exon:NA12877_ch_T0001973:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51490949	51491454	1000	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001974;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001974;gene_name=WASH6P;ID=NA12877_ch_T0001974;Name=WASH6P
NA12877_chrY	CAT	exon	51490949	51490953	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001974;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001974;transcript_name=NA12877_ch_T0001974;gene_name=WASH6P;ID=exon:NA12877_ch_T0001974:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51490954	51491130	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001974;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001974;transcript_name=NA12877_ch_T0001974;gene_name=WASH6P;ID=intron:NA12877_ch_T0001974:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491131	51491332	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001974;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001974;transcript_name=NA12877_ch_T0001974;gene_name=WASH6P;ID=exon:NA12877_ch_T0001974:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491333	51491420	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001974;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001974;transcript_name=NA12877_ch_T0001974;gene_name=WASH6P;ID=intron:NA12877_ch_T0001974:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491421	51491454	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001974;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001974;transcript_name=NA12877_ch_T0001974;gene_name=WASH6P;ID=exon:NA12877_ch_T0001974:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51490949	51491508	1000	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001975;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001975;gene_name=WASH6P;ID=NA12877_ch_T0001975;Name=WASH6P
NA12877_chrY	CAT	exon	51490949	51490953	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001975;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001975;transcript_name=NA12877_ch_T0001975;gene_name=WASH6P;ID=exon:NA12877_ch_T0001975:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51490954	51491130	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001975;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001975;transcript_name=NA12877_ch_T0001975;gene_name=WASH6P;ID=intron:NA12877_ch_T0001975:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491131	51491328	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001975;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001975;transcript_name=NA12877_ch_T0001975;gene_name=WASH6P;ID=exon:NA12877_ch_T0001975:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491329	51491420	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001975;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001975;transcript_name=NA12877_ch_T0001975;gene_name=WASH6P;ID=intron:NA12877_ch_T0001975:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51491421	51491508	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001975;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001975;transcript_name=NA12877_ch_T0001975;gene_name=WASH6P;ID=exon:NA12877_ch_T0001975:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51491131	51491211	1000	+	.	source_transcript=ENST00000711279.1;source_transcript_name=WASH6P-224;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711279.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001976;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001976;gene_name=WASH6P;ID=NA12877_ch_T0001976;Name=WASH6P
NA12877_chrY	CAT	exon	51491131	51491211	.	+	.	source_transcript=ENST00000711279.1;source_transcript_name=WASH6P-224;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711279.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=NA12877_ch_T0001976;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001976;transcript_name=NA12877_ch_T0001976;gene_name=WASH6P;ID=exon:NA12877_ch_T0001976:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51491486	51493785	1000	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.695;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=NA12877_ch_T0001977;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001977;gene_name=WASH6P;ID=NA12877_ch_T0001977;Name=WASH6P
NA12877_chrY	CAT	exon	51491486	51491579	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.695;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=NA12877_ch_T0001977;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001977;transcript_name=NA12877_ch_T0001977;gene_name=WASH6P;ID=exon:NA12877_ch_T0001977:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51491580	51492238	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.695;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=NA12877_ch_T0001977;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001977;transcript_name=NA12877_ch_T0001977;gene_name=WASH6P;ID=intron:NA12877_ch_T0001977:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51492239	51493785	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.695;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=NA12877_ch_T0001977;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001977;transcript_name=NA12877_ch_T0001977;gene_name=WASH6P;ID=exon:NA12877_ch_T0001977:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51491943	51493673	1000	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=NA12877_ch_T0001978;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001978;gene_name=WASH6P;ID=NA12877_ch_T0001978;Name=WASH6P
NA12877_chrY	CAT	exon	51491943	51492391	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=NA12877_ch_T0001978;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001978;transcript_name=NA12877_ch_T0001978;gene_name=WASH6P;ID=exon:NA12877_ch_T0001978:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51492392	51493150	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=NA12877_ch_T0001978;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001978;transcript_name=NA12877_ch_T0001978;gene_name=WASH6P;ID=intron:NA12877_ch_T0001978:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51493151	51493219	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=NA12877_ch_T0001978;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001978;transcript_name=NA12877_ch_T0001978;gene_name=WASH6P;ID=exon:NA12877_ch_T0001978:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51493220	51493359	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=NA12877_ch_T0001978;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001978;transcript_name=NA12877_ch_T0001978;gene_name=WASH6P;ID=intron:NA12877_ch_T0001978:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51493360	51493673	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=NA12877_ch_T0001978;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001978;transcript_name=NA12877_ch_T0001978;gene_name=WASH6P;ID=exon:NA12877_ch_T0001978:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51492190	51493673	1000	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=NA12877_ch_T0001979;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_G0000744;transcript_name=NA12877_ch_T0001979;gene_name=WASH6P;ID=NA12877_ch_T0001979;Name=WASH6P
NA12877_chrY	CAT	exon	51492190	51492391	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=NA12877_ch_T0001979;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001979;transcript_name=NA12877_ch_T0001979;gene_name=WASH6P;ID=exon:NA12877_ch_T0001979:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51492392	51493150	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=NA12877_ch_T0001979;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001979;transcript_name=NA12877_ch_T0001979;gene_name=WASH6P;ID=intron:NA12877_ch_T0001979:0;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51493151	51493168	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=NA12877_ch_T0001979;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001979;transcript_name=NA12877_ch_T0001979;gene_name=WASH6P;ID=exon:NA12877_ch_T0001979:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51493169	51493359	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=NA12877_ch_T0001979;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001979;transcript_name=NA12877_ch_T0001979;gene_name=WASH6P;ID=intron:NA12877_ch_T0001979:1;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51493360	51493673	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=NA12877_ch_T0001979;gene_id=NA12877_ch_G0000744;Parent=NA12877_ch_T0001979;transcript_name=NA12877_ch_T0001979;gene_name=WASH6P;ID=exon:NA12877_ch_T0001979:2;Name=WASH6P;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51493711	51497233	.	-	.	source_gene_common_name=ENSG00000310542;source_gene=ENSG00000310542.1;gene_id=NA12877_ch_G0000745;gene_biotype=lncRNA;gene_name=ENSG00000310542;gene_sources=liftoff;ID=NA12877_ch_G0000745;Name=ENSG00000310542
NA12877_chrY	CAT	transcript	51493711	51493785	1000	-	.	source_transcript=ENST00000850693.1;source_transcript_name=ENST00000850693;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850693.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850693.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001980;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_G0000745;transcript_name=NA12877_ch_T0001980;gene_name=ENSG00000310542;ID=NA12877_ch_T0001980;Name=ENSG00000310542
NA12877_chrY	CAT	exon	51493711	51493785	.	-	.	source_transcript=ENST00000850693.1;source_transcript_name=ENST00000850693;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850693.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850693.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001980;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001980;transcript_name=NA12877_ch_T0001980;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001980:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51493776	51497164	1000	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001981;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_G0000745;transcript_name=NA12877_ch_T0001981;gene_name=ENSG00000310542;ID=NA12877_ch_T0001981;Name=ENSG00000310542
NA12877_chrY	CAT	exon	51493776	51493913	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001981;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001981;transcript_name=NA12877_ch_T0001981;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001981:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51493914	51494500	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001981;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001981;transcript_name=NA12877_ch_T0001981;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001981:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51494501	51494724	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001981;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001981;transcript_name=NA12877_ch_T0001981;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001981:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51494725	51495455	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001981;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001981;transcript_name=NA12877_ch_T0001981;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001981:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495456	51495564	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001981;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001981;transcript_name=NA12877_ch_T0001981;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001981:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51495565	51495949	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001981;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001981;transcript_name=NA12877_ch_T0001981;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001981:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495950	51496167	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001981;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001981;transcript_name=NA12877_ch_T0001981;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001981:3;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51496168	51496965	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001981;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001981;transcript_name=NA12877_ch_T0001981;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001981:3;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51496966	51497164	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001981;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001981;transcript_name=NA12877_ch_T0001981;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001981:4;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51493779	51497052	1000	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001982;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_G0000745;transcript_name=NA12877_ch_T0001982;gene_name=ENSG00000310542;ID=NA12877_ch_T0001982;Name=ENSG00000310542
NA12877_chrY	CAT	exon	51493779	51494694	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001982;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001982;transcript_name=NA12877_ch_T0001982;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001982:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51494695	51495479	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001982;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001982;transcript_name=NA12877_ch_T0001982;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001982:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495480	51495582	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001982;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001982;transcript_name=NA12877_ch_T0001982;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001982:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51495583	51495949	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001982;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001982;transcript_name=NA12877_ch_T0001982;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001982:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495950	51496167	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001982;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001982;transcript_name=NA12877_ch_T0001982;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001982:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51496168	51496965	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001982;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001982;transcript_name=NA12877_ch_T0001982;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001982:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51496966	51497052	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001982;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001982;transcript_name=NA12877_ch_T0001982;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001982:3;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51493780	51497193	1000	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001983;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_G0000745;transcript_name=NA12877_ch_T0001983;gene_name=ENSG00000310542;ID=NA12877_ch_T0001983;Name=ENSG00000310542
NA12877_chrY	CAT	exon	51493780	51493913	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001983;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001983;transcript_name=NA12877_ch_T0001983;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001983:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51493914	51494500	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001983;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001983;transcript_name=NA12877_ch_T0001983;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001983:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51494501	51494724	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001983;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001983;transcript_name=NA12877_ch_T0001983;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001983:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51494725	51495479	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001983;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001983;transcript_name=NA12877_ch_T0001983;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001983:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495480	51495564	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001983;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001983;transcript_name=NA12877_ch_T0001983;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001983:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51495565	51495949	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001983;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001983;transcript_name=NA12877_ch_T0001983;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001983:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495950	51496167	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001983;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001983;transcript_name=NA12877_ch_T0001983;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001983:3;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51496168	51497156	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001983;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001983;transcript_name=NA12877_ch_T0001983;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001983:3;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51497157	51497193	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001983;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001983;transcript_name=NA12877_ch_T0001983;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001983:4;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51493780	51497160	1000	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001984;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_G0000745;transcript_name=NA12877_ch_T0001984;gene_name=ENSG00000310542;ID=NA12877_ch_T0001984;Name=ENSG00000310542
NA12877_chrY	CAT	exon	51493780	51494952	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001984;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001984;transcript_name=NA12877_ch_T0001984;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001984:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51494953	51495479	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001984;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001984;transcript_name=NA12877_ch_T0001984;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001984:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495480	51495564	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001984;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001984;transcript_name=NA12877_ch_T0001984;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001984:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51495565	51495949	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001984;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001984;transcript_name=NA12877_ch_T0001984;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001984:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495950	51496167	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001984;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001984;transcript_name=NA12877_ch_T0001984;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001984:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51496168	51496965	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001984;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001984;transcript_name=NA12877_ch_T0001984;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001984:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51496966	51497160	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001984;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001984;transcript_name=NA12877_ch_T0001984;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001984:3;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51493782	51497233	1000	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001985;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_G0000745;transcript_name=NA12877_ch_T0001985;gene_name=ENSG00000310542;ID=NA12877_ch_T0001985;Name=ENSG00000310542
NA12877_chrY	CAT	exon	51493782	51494724	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001985;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001985;transcript_name=NA12877_ch_T0001985;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001985:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51494725	51495479	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001985;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001985;transcript_name=NA12877_ch_T0001985;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001985:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495480	51495564	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001985;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001985;transcript_name=NA12877_ch_T0001985;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001985:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51495565	51495949	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001985;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001985;transcript_name=NA12877_ch_T0001985;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001985:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495950	51496167	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001985;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001985;transcript_name=NA12877_ch_T0001985;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001985:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51496168	51497156	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001985;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001985;transcript_name=NA12877_ch_T0001985;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001985:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51497157	51497233	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001985;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001985;transcript_name=NA12877_ch_T0001985;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001985:3;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51493783	51497073	1000	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001986;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_G0000745;transcript_name=NA12877_ch_T0001986;gene_name=ENSG00000310542;ID=NA12877_ch_T0001986;Name=ENSG00000310542
NA12877_chrY	CAT	exon	51493783	51494612	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001986;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001986;transcript_name=NA12877_ch_T0001986;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001986:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51494613	51495479	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001986;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001986;transcript_name=NA12877_ch_T0001986;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001986:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495480	51495564	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001986;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001986;transcript_name=NA12877_ch_T0001986;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001986:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51495565	51495949	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001986;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001986;transcript_name=NA12877_ch_T0001986;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001986:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495950	51496167	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001986;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001986;transcript_name=NA12877_ch_T0001986;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001986:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51496168	51496965	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001986;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001986;transcript_name=NA12877_ch_T0001986;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001986:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51496966	51497073	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001986;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001986;transcript_name=NA12877_ch_T0001986;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001986:3;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51494522	51497187	1000	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001988;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_G0000745;transcript_name=NA12877_ch_T0001988;gene_name=ENSG00000310542;ID=NA12877_ch_T0001988;Name=ENSG00000310542
NA12877_chrY	CAT	exon	51494522	51494724	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001988;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001988;transcript_name=NA12877_ch_T0001988;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001988:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51494725	51495479	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001988;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001988;transcript_name=NA12877_ch_T0001988;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001988:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495480	51495564	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001988;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001988;transcript_name=NA12877_ch_T0001988;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001988:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51495565	51495949	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001988;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001988;transcript_name=NA12877_ch_T0001988;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001988:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495950	51496167	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001988;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001988;transcript_name=NA12877_ch_T0001988;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001988:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51496168	51496965	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001988;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001988;transcript_name=NA12877_ch_T0001988;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001988:2;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51496966	51497187	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001988;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001988;transcript_name=NA12877_ch_T0001988;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001988:3;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	transcript	51495506	51496330	1000	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001989;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_G0000745;transcript_name=NA12877_ch_T0001989;gene_name=ENSG00000310542;ID=NA12877_ch_T0001989;Name=ENSG00000310542
NA12877_chrY	CAT	exon	51495506	51495564	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001989;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001989;transcript_name=NA12877_ch_T0001989;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001989:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51495565	51495949	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001989;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001989;transcript_name=NA12877_ch_T0001989;gene_name=ENSG00000310542;ID=intron:NA12877_ch_T0001989:0;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495950	51496330	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=NA12877_ch_T0001989;gene_id=NA12877_ch_G0000745;Parent=NA12877_ch_T0001989;transcript_name=NA12877_ch_T0001989;gene_name=ENSG00000310542;ID=exon:NA12877_ch_T0001989:1;Name=ENSG00000310542;rna_support=False;reference_support=False
NA12877_chrY	CAT	gene	51493783	51495997	.	-	.	source_gene_common_name=DDX11L16;source_gene=ENSG00000292371.1;gene_id=NA12877_ch_G0000746;gene_biotype=unprocessed_pseudogene;gene_name=DDX11L16;gene_sources=liftoff;ID=NA12877_ch_G0000746;Name=DDX11L16
NA12877_chrY	CAT	transcript	51493783	51495997	1000	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=NA12877_ch_T0001987;gene_id=NA12877_ch_G0000746;Parent=NA12877_ch_G0000746;transcript_name=NA12877_ch_T0001987;gene_name=DDX11L16;ID=NA12877_ch_T0001987;Name=DDX11L16
NA12877_chrY	CAT	exon	51493783	51494724	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=NA12877_ch_T0001987;gene_id=NA12877_ch_G0000746;Parent=NA12877_ch_T0001987;transcript_name=NA12877_ch_T0001987;gene_name=DDX11L16;ID=exon:NA12877_ch_T0001987:0;Name=DDX11L16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51494725	51494802	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=NA12877_ch_T0001987;gene_id=NA12877_ch_G0000746;Parent=NA12877_ch_T0001987;transcript_name=NA12877_ch_T0001987;gene_name=DDX11L16;ID=intron:NA12877_ch_T0001987:0;Name=DDX11L16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51494803	51494956	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=NA12877_ch_T0001987;gene_id=NA12877_ch_G0000746;Parent=NA12877_ch_T0001987;transcript_name=NA12877_ch_T0001987;gene_name=DDX11L16;ID=exon:NA12877_ch_T0001987:1;Name=DDX11L16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51494957	51495124	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=NA12877_ch_T0001987;gene_id=NA12877_ch_G0000746;Parent=NA12877_ch_T0001987;transcript_name=NA12877_ch_T0001987;gene_name=DDX11L16;ID=intron:NA12877_ch_T0001987:1;Name=DDX11L16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495125	51495202	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=NA12877_ch_T0001987;gene_id=NA12877_ch_G0000746;Parent=NA12877_ch_T0001987;transcript_name=NA12877_ch_T0001987;gene_name=DDX11L16;ID=exon:NA12877_ch_T0001987:2;Name=DDX11L16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51495203	51495479	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=NA12877_ch_T0001987;gene_id=NA12877_ch_G0000746;Parent=NA12877_ch_T0001987;transcript_name=NA12877_ch_T0001987;gene_name=DDX11L16;ID=intron:NA12877_ch_T0001987:2;Name=DDX11L16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495480	51495564	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=NA12877_ch_T0001987;gene_id=NA12877_ch_G0000746;Parent=NA12877_ch_T0001987;transcript_name=NA12877_ch_T0001987;gene_name=DDX11L16;ID=exon:NA12877_ch_T0001987:3;Name=DDX11L16;rna_support=False;reference_support=False
NA12877_chrY	CAT	intron	51495565	51495949	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=NA12877_ch_T0001987;gene_id=NA12877_ch_G0000746;Parent=NA12877_ch_T0001987;transcript_name=NA12877_ch_T0001987;gene_name=DDX11L16;ID=intron:NA12877_ch_T0001987:3;Name=DDX11L16;rna_support=False;reference_support=False
NA12877_chrY	CAT	exon	51495950	51495997	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=NA12877_ch_T0001987;gene_id=NA12877_ch_G0000746;Parent=NA12877_ch_T0001987;transcript_name=NA12877_ch_T0001987;gene_name=DDX11L16;ID=exon:NA12877_ch_T0001987:4;Name=DDX11L16;rna_support=False;reference_support=False